Protocadherin 11
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30002762 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of Protocadherin 11 vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]) HSP 1 Score: 244.973 bits (624), Expect = 3.372e-66 Identity = 209/742 (28.17%), Postives = 344/742 (46.36%), Query Frame = 1
Query: 310 IQIKPESCDLFVS-SRLDREQLCDKSN------CILQMSAFI------NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP---LLDLFELMYTPPRSLK---LVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK---LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND----GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVY 2424
+++ ++ D+F + + +DRE L + N CIL+ I + ++ IE+ DINDN+P F + EN+ IG +PLA+D D GPN V SY L+ +LF L + K L++ G +D E+ + Y LT +K D G S L +++ D NDN P F + + + E++ + +V QV D D+G N + + + PE + RR + G I ++ ++ D+ ++ A+D G P S+ +++ V D+N++AP+I ++ +G I E+ T VAL+ V+D D+G N V C ++ F + + E S + K L PLD E + + IV D+G P S+ S+ + V+DVN+ P + PE+ A++ A+D D +N +L + + G F I G +++ LDRE R + L V+ D P+ + T+ L + + D NDN PK +L +F + EN+ S +G + V D D G N +V+ + + F + GTI S DRE S ++ D G P S + + V DENDN P T PS+ +++ + + RL + V A D DS NA +LI + P LF + +G + E+ GL+ L + SD G+PP++ T + +Y
Sbjct: 99 LRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERW-DSYDLT-IKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPE--VVRRLLRLDRNTGLITVQGPVDREDL-STLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIR-GIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVL-VNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSV--------EQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHK----LLTPQTRLG---ETVSQVAAEDFDSGVNA----ELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRY---GTALVHLY 811 HSP 2 Score: 70.4774 bits (171), Expect = 1.683e-11 Identity = 72/302 (23.84%), Postives = 127/302 (42.05%), Query Frame = 1
Query: 211 GHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQ---------LCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRP-IFLKCNESVRIME-DTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFH----LAITARDHGAIP 1071
G +I + + +G N ++ + +KG+ I PE+ ++ V + LDREQ D+ + LQ +A V + ++D NDN PKF + + EN + D D G N+ ++E F + ++ + + ++++ + ++KA D G + + + I++ D NDN P I N S +++ T+L +TV QV +D D G N + + I L F + S +G I L K +I + H L + D G P
Sbjct: 522 GEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTA--------TVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDFVI-----QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGL----FQIGSHSGAITLEK-----EIERRHHGLHRLVVKVSDRGKPP 801
BLAST of Protocadherin 11 vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]) HSP 1 Score: 244.588 bits (623), Expect = 1.159e-65 Identity = 209/742 (28.17%), Postives = 344/742 (46.36%), Query Frame = 1
Query: 310 IQIKPESCDLFVS-SRLDREQLCDKSN------CILQMSAFI------NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP---LLDLFELMYTPPRSLK---LVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK---LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND----GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVY 2424
+++ ++ D+F + + +DRE L + N CIL+ I + ++ IE+ DINDN+P F + EN+ IG +PLA+D D GPN V SY L+ +LF L + K L++ G +D E+ + Y LT +K D G S L +++ D NDN P F + + + E++ + +V QV D D+G N + + + PE + RR + G I ++ ++ D+ ++ A+D G P S+ +++ V D+N++AP+I ++ +G I E+ T VAL+ V+D D+G N V C ++ F + + E S + K L PLD E + + IV D+G P S+ S+ + V+DVN+ P + PE+ A++ A+D D +N +L + + G F I G +++ LDRE R + L V+ D P+ + T+ L + + D NDN PK +L +F + EN+ S +G + V D D G N +V+ + + F + GTI S DRE S ++ D G P S + + V DENDN P T PS+ +++ + + RL + V A D DS NA +LI + P LF + +G + E+ GL+ L + SD G+PP++ T + +Y
Sbjct: 99 LRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERW-DSYDLT-IKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPE--VVRRLLRLDRNTGLITVQGPVDREDL-STLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIR-GIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVL-VNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSV--------EQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHK----LLTPQTRLG---ETVSQVAAEDFDSGVNA----ELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRY---GTALVHLY 811 HSP 2 Score: 70.0922 bits (170), Expect = 2.489e-11 Identity = 66/276 (23.91%), Postives = 119/276 (43.12%), Query Frame = 1
Query: 211 GHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQ---------LCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRP-IFLKCNESVRIME-DTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSL 1005
G +I + + +G N ++ + +KG+ I PE+ ++ V + LDREQ D+ + LQ +A V + ++D NDN PKF + + EN + D D G N+ ++E F + ++ + + ++++ + ++KA D G + + + I++ D NDN P I N S +++ T+L +TV QV +D D G N + + I L F + S +G I L K +
Sbjct: 522 GEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTA--------TVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDFVI-----QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGL----FQIGSHSGAITLEKEI 780
BLAST of Protocadherin 11 vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813]) HSP 1 Score: 233.032 bits (593), Expect = 2.564e-62 Identity = 217/757 (28.67%), Postives = 355/757 (46.90%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSN-GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVS-SRLDREQLCD----KSNCILQMSAFI---NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGN--LGTNGELSE-GLYVLKMMASDNGRP 2382
EE+P +IG+++KD L++ N L F + +I+I+ ++ ++F + +R+DRE+LC +C ++ I +K+ I DINDN+P F T + ENS I LP A D D+G N V +Y L ++F L + TP + +L+++ ++D E+K ++ +VK D G Q S L +S+ D NDN P+F + V I E+ + +V Q+ D D GEN ++ F ++ N +ARR F + + G I +++ L+ + P+ L + A D G +P + ++ NV D+N++ PSI IV P + + + EN T +ALI VTD D +NG+V C T + + S+ F L LD E + ++ D G P + + I V D N+ P IPE+ KV ATD D P+A + L D F +D G L ++K LDRE + +L DN P T+++ + ++I D NDN P F++ ENL + T+G + V+DPD G N V ++ D F ++ G I DRE + D G S S K+ + V D NDN+P++ P N + + S+ + + V A D D+ NA + + ++ + LF ++ TGN L ++++ GL+ + + A+D G+P
Sbjct: 64 EEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDT--YVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSN-IARRLFHLNATTGLITIKEPLDREETPNH-KLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP-VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC---FTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVP-PLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDE--------NDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPP-YNYSYELVLPSTNPG-----TVVFQVIAVDNDTGMNAEVRYSIVGGNTRD----LFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 791 HSP 2 Score: 138.272 bits (347), Expect = 2.418e-32 Identity = 137/474 (28.90%), Postives = 218/474 (45.99%), Query Frame = 1
Query: 1084 CKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL-----TLISD-NDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-----LLEPT--SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRES-----FIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
K+ F + DIN++AP + P I EN+ + L D D G NG N EL + L+ E +LI++K LDRE + + + D G P +S+ + +SV D N+ P K IPE+ PV +S ++ ATD D N K+ L+S+ F ++ G + + +PLDRE P H L+VL +D +R L + ++D+NDN+P ++ P + L EN+ N+ I + V+D D+ NG+V H + + F+ E+ +D E T E +++L D G P L+ + +KV DENDN P++T S +S+ E+ ++ V A+D DS NA I++ L D P F+L+ TG L +L E Y+ ++A DNG PP S + T+++ + N
Sbjct: 155 VKIRFLIEDINDNAP---LFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVL---VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAY------LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFT--------------QSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL---GPDAPPE--FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTS-NVTVFVSIIDQN 596 HSP 3 Score: 110.538 bits (275), Expect = 8.240e-24 Identity = 134/540 (24.81%), Postives = 235/540 (43.52%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDI----GPNSVHSYTLEPLLDL-FELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKK--PLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYN-----VIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDND-GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISD 1749
E PVG + + + IG N ++ S + ++ + + + + + LDRE+ + +L + + V + + D+NDN P + V N + S+ +PL T I + ++ H+ + D P S + +L + +S + + ++ A DAG+ L L I + D NDN P+F + +V I E+ + +V D D G N +++ + + PE L RR G + + K L+ + DK+ I A+D+G PL+S + ++ID N+++P K + EN TV LI VTD D G+N V ++ E +FT + +I+ DRE S + D G +S+ ++I+V+DVN+ P V P YN V+P P F +VIA D D +A ++ +++ N F ID GN+ LM+ D H ++V D P+S + + +N+ +++
Sbjct: 292 ENAPVGTSVTQL-HATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAM-VLVNVTDVNDNVPSIDIRYIVNPV--NDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRR-------TGMLTVVKKLDR-EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY---KFYVPENLPRHGTVGLITVTDPDYGDNSAVTLS-------ILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIV-PPYNYSYELVLPSTNPGTVVF-QVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNE 806
BLAST of Protocadherin 11 vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813]) HSP 1 Score: 233.032 bits (593), Expect = 2.854e-62 Identity = 217/757 (28.67%), Postives = 355/757 (46.90%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSN-GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVS-SRLDREQLC----DKSNCILQMSAFI---NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGN--LGTNGELSE-GLYVLKMMASDNGRP 2382
EE+P +IG+++KD L++ N L F + +I+I+ ++ ++F + +R+DRE+LC +C ++ I +K+ I DINDN+P F T + ENS I LP A D D+G N V +Y L ++F L + TP + +L+++ ++D E+K ++ +VK D G Q S L +S+ D NDN P+F + V I E+ + +V Q+ D D GEN ++ F ++ N +ARR F + + G I +++ L+ + P+ L + A D G +P + ++ NV D+N++ PSI IV P + + + EN T +ALI VTD D +NG+V C T + + S+ F L LD E + ++ D G P + + I V D N+ P IPE+ KV ATD D P+A + L D F +D G L ++K LDRE + +L DN P T+++ + ++I D NDN P F++ ENL + T+G + V+DPD G N V ++ D F ++ G I DRE + D G S S K+ + V D NDN+P++ P N + + S+ + + V A D D+ NA + + ++ + LF ++ TGN L ++++ GL+ + + A+D G+P
Sbjct: 53 EEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDT--YVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSN-IARRLFHLNATTGLITIKEPLDREETPNH-KLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP-VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC---FTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVP-PLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDE--------NDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPP-YNYSYELVLPSTNPG-----TVVFQVIAVDNDTGMNAEVRYSIVGGNTRD----LFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 780 HSP 2 Score: 138.272 bits (347), Expect = 2.664e-32 Identity = 137/474 (28.90%), Postives = 218/474 (45.99%), Query Frame = 1
Query: 1084 CKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL-----TLISD-NDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-----LLEPT--SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRES-----FIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
K+ F + DIN++AP + P I EN+ + L D D G NG N EL + L+ E +LI++K LDRE + + + D G P +S+ + +SV D N+ P K IPE+ PV +S ++ ATD D N K+ L+S+ F ++ G + + +PLDRE P H L+VL +D +R L + ++D+NDN+P ++ P + L EN+ N+ I + V+D D+ NG+V H + + F+ E+ +D E T E +++L D G P L+ + +KV DENDN P++T S +S+ E+ ++ V A+D DS NA I++ L D P F+L+ TG L +L E Y+ ++A DNG PP S + T+++ + N
Sbjct: 144 VKIRFLIEDINDNAP---LFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVL---VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAY------LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFT--------------QSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL---GPDAPPE--FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTS-NVTVFVSIIDQN 585 HSP 3 Score: 110.153 bits (274), Expect = 1.011e-23 Identity = 134/540 (24.81%), Postives = 235/540 (43.52%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDI----GPNSVHSYTLEPLLDL-FELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKK--PLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYN-----VIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDND-GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISD 1749
E PVG + + + IG N ++ S + ++ + + + + + LDRE+ + +L + + V + + D+NDN P + V N + S+ +PL T I + ++ H+ + D P S + +L + +S + + ++ A DAG+ L L I + D NDN P+F + +V I E+ + +V D D G N +++ + + PE L RR G + + K L+ + DK+ I A+D+G PL+S + ++ID N+++P K + EN TV LI VTD D G+N V ++ E +FT + +I+ DRE S + D G +S+ ++I+V+DVN+ P V P YN V+P P F +VIA D D +A ++ +++ N F ID GN+ LM+ D H ++V D P+S + + +N+ +++
Sbjct: 281 ENAPVGTSVTQL-HATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAM-VLVNVTDVNDNVPSIDIRYIVNPV--NDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRR-------TGMLTVVKKLDR-EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY---KFYVPENLPRHGTVGLITVTDPDYGDNSAVTLS-------ILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIV-PPYNYSYELVLPSTNPGTVVF-QVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNE 795
BLAST of Protocadherin 11 vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813]) HSP 1 Score: 233.032 bits (593), Expect = 2.854e-62 Identity = 217/757 (28.67%), Postives = 355/757 (46.90%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSN-GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVS-SRLDREQLC----DKSNCILQMSAFI---NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGN--LGTNGELSE-GLYVLKMMASDNGRP 2382
EE+P +IG+++KD L++ N L F + +I+I+ ++ ++F + +R+DRE+LC +C ++ I +K+ I DINDN+P F T + ENS I LP A D D+G N V +Y L ++F L + TP + +L+++ ++D E+K ++ +VK D G Q S L +S+ D NDN P+F + V I E+ + +V Q+ D D GEN ++ F ++ N +ARR F + + G I +++ L+ + P+ L + A D G +P + ++ NV D+N++ PSI IV P + + + EN T +ALI VTD D +NG+V C T + + S+ F L LD E + ++ D G P + + I V D N+ P IPE+ KV ATD D P+A + L D F +D G L ++K LDRE + +L DN P T+++ + ++I D NDN P F++ ENL + T+G + V+DPD G N V ++ D F ++ G I DRE + D G S S K+ + V D NDN+P++ P N + + S+ + + V A D D+ NA + + ++ + LF ++ TGN L ++++ GL+ + + A+D G+P
Sbjct: 53 EEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDT--YVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSN-IARRLFHLNATTGLITIKEPLDREETPNH-KLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP-VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC---FTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVP-PLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDE--------NDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPP-YNYSYELVLPSTNPG-----TVVFQVIAVDNDTGMNAEVRYSIVGGNTRD----LFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 780 HSP 2 Score: 138.272 bits (347), Expect = 2.664e-32 Identity = 137/474 (28.90%), Postives = 218/474 (45.99%), Query Frame = 1
Query: 1084 CKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL-----TLISD-NDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-----LLEPT--SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRES-----FIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
K+ F + DIN++AP + P I EN+ + L D D G NG N EL + L+ E +LI++K LDRE + + + D G P +S+ + +SV D N+ P K IPE+ PV +S ++ ATD D N K+ L+S+ F ++ G + + +PLDRE P H L+VL +D +R L + ++D+NDN+P ++ P + L EN+ N+ I + V+D D+ NG+V H + + F+ E+ +D E T E +++L D G P L+ + +KV DENDN P++T S +S+ E+ ++ V A+D DS NA I++ L D P F+L+ TG L +L E Y+ ++A DNG PP S + T+++ + N
Sbjct: 144 VKIRFLIEDINDNAP---LFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVL---VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAY------LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFT--------------QSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL---GPDAPPE--FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTS-NVTVFVSIIDQN 585 HSP 3 Score: 110.153 bits (274), Expect = 1.011e-23 Identity = 134/540 (24.81%), Postives = 235/540 (43.52%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDI----GPNSVHSYTLEPLLDL-FELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKK--PLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYN-----VIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDND-GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISD 1749
E PVG + + + IG N ++ S + ++ + + + + + LDRE+ + +L + + V + + D+NDN P + V N + S+ +PL T I + ++ H+ + D P S + +L + +S + + ++ A DAG+ L L I + D NDN P+F + +V I E+ + +V D D G N +++ + + PE L RR G + + K L+ + DK+ I A+D+G PL+S + ++ID N+++P K + EN TV LI VTD D G+N V ++ E +FT + +I+ DRE S + D G +S+ ++I+V+DVN+ P V P YN V+P P F +VIA D D +A ++ +++ N F ID GN+ LM+ D H ++V D P+S + + +N+ +++
Sbjct: 281 ENAPVGTSVTQL-HATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAM-VLVNVTDVNDNVPSIDIRYIVNPV--NDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRR-------TGMLTVVKKLDR-EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY---KFYVPENLPRHGTVGLITVTDPDYGDNSAVTLS-------ILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIV-PPYNYSYELVLPSTNPGTVVF-QVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNE 795
BLAST of Protocadherin 11 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 163.31 bits (412), Expect = 3.224e-40 Identity = 190/715 (26.57%), Postives = 314/715 (43.92%), Query Frame = 1
Query: 295 QSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAF------INAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTR--VKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDREL-RPFHPLVVLV--TDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLS----VRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRP 2382
+S+ + + S ++ ++ +DRE L DK IL+++A+ I+A T V + ++D+ DNSP FE S+ E E++ IG + A D+D G N Y+L + L+ +S + +D E S L R V A D G + S + I++ DVNDN P+F + +V I+E+ + + V D D G NG+V + + + ++ G++ LR+ +++ + P I A+D LSS L NVIDIN+HAP++I + + EN V + D D G NG + + + F+I E +T K LDRE + ++ + RD G P +T +I++ + D+N+ P + YNV I E++P S + A D D D + + + F I G+ + + EL R H + V + TD R +N+ I D+N P S + E+ + LK D D G N ++ Y+I+ F ++ G I +DRE + + + +D SP L+ +I + + D NDN P F+ SS AA +S V SF+ V A D D N + + ++ + + LF L+ +G L + +L + VL + A D G P
Sbjct: 208 RSQNLFTLDTMSGEIRLAKSMDREVL-DKH--ILKVTAYERVDPTISAST--TVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGE-GNGKNLLAINAKSGVIQTAAPLDRETLS----LIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSS----GIGGLTIDYSTGEVTLRERIDAKNSP--ITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKM---ITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTT------KLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFD-KKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGR---CVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARI------VYSIDSSQF---FRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSP------------QFTSSSYAATISEDIPVGTSFL-QVSAIDADIGPNGIVDY-FLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP 870 HSP 2 Score: 152.14 bits (383), Expect = 8.509e-37 Identity = 173/696 (24.86%), Postives = 302/696 (43.39%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLC-DKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISA 2256
+ E+ P+G + + L G NG + L K ++ I +S + ++ LDRE L + + I ++ V I ++D+NDN+P F S+ V EN I ATD D G N Y++ + L ++ LR ++D + N ++A D + L S + L I++ D+ND+ P + + + + E+ + + V +V D D G NG + + + + + F + +G I K L+ + ++ L +TARD G L++ + + DIN++AP+ K I E + + + D D+ E ++ F IL+ L + L R+ + V I D G + +++ + DVN P P IPE P+ + A D D N ++ D+ FF ID G++ + LDRE R ++V +D++ P TS + + + DINDN P+ + + + E++ ++ Q+ D D G NG V + L + + + F ++ GT+ +DRE + I+L I D+G+PSLS +I L ++D NDN P TF E ++ I+ + S S + + A D D +NA+ISF++
Sbjct: 279 IREDAPIGTTVLSVFA-RDLDSGENGEIEYSL----GEGNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTG-EVTLRERIDAK---NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED-------FIIDEDSGLIKTTKLLDR-ETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEY---NVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILD---IGDQGAILSVSGELKRQ-DHKVRVEISATDQGGLQGRCV--VNVFIDDVNS-APYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASP-PLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQL---FRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAP--TF---EQLSYDLYIAEN----SPVGSTVGTIVARDADEGDNADISFRIFGG 934 HSP 3 Score: 144.05 bits (362), Expect = 2.830e-34 Identity = 124/452 (27.43%), Postives = 226/452 (50.00%), Query Frame = 1
Query: 928 TPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKL---TLISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSF-HLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKD 2265
P++ ++ F++ +++G+I L KS++ ++ DK L +TA + +S+ ++ +V+D+ +++P G +I E+ TTV + D D G NG++ L + +L + + + PLDRE +S I + ++ D G P + + + I+V+DVN+ P + SYNV I E++ + + A V ATD+D N K+ S G ID G + L + +D + P V+ D + P + ++++ L I + DIND+ P L+ L EN+ +G++ D DSG NG +K+ + + + F ++ED G I + + +DRE T+ L++ D G+PSL+ I + + D NDN P TF + ++N +IS R S I+ ++A D D E+ I++++ A ++
Sbjct: 203 APQDSRSQNLFTLDTMSGEIRLAKSMDR-EVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFG---EIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLA---INAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASD-SYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEVTLRERIDAKNSPI-TAVIRAKDGAQP-ALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGS---------EDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAP--TF---DKKEYNVTISEEMP----RGSQIITLKAVDND--EDQKITYRIEEADRE 624 HSP 4 Score: 122.479 bits (306), Expect = 1.223e-27 Identity = 157/643 (24.42%), Postives = 276/643 (42.92%), Query Frame = 1
Query: 520 QIGYSQELPLATDIDIGPNSVHS--YTLEPLLDLFELMYTP--PRSLKL----VLRGKVDYEKKSNRYFL----TRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL-LEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESF---IVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPP 2385
Q Y +ELP T I+ SV + + +PL + M P RS L + G++ K +R L +V A + + + + + + + DV DN PIF K + I ED + TV V +DLD GENG + + + L ++ + +G I L+ + L + A D G S + V+D+N++AP V + I+EN +A + TD D G NGKV+ ++++S L ST ++ +++ +D + S I I +D P S+ ++I+VID+N++ P L + E++ + +V A D+D P+ +K ++ D + D G +K K LDRE + L V D P S TS + + + DINDN P + + + E + S I LK D D + K+ + + A D+ + + D G I S+ + ++ + I TDQG + + V+ V F D N+ F+ + ++ ++ ++A D D +NA I + + S+ F ++ +G++ + +L + + + ASD+ PP
Sbjct: 167 QEKYVKELPEDTPIETIIASVKASHASSQPL---YYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNL----LAINAKSGVIQTAAPLDR-ETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAP---VFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGL---TIDYSTGEVTLRERIDAK-NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDS-GLIKTTKLLDRETTARYSLKVTARDMGTP-SLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE--DQKITYRIEEA----DREVFSILDIG-DQGAILSVSGELKRQDHKVRVEISATDQG----GLQGRCVVNV-----------FIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSS-------QFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPP 763 HSP 5 Score: 112.464 bits (280), Expect = 1.146e-24 Identity = 130/506 (25.69%), Postives = 237/506 (46.84%), Query Frame = 1
Query: 412 INAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPL-LDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDP--DANLKLTLISDNDG-FFEID----VFGNLKLM--KPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLL 1887
+N T I V ++ DINDN+P F+ + V E G SQ + L +D + +Y +E ++F ++ + L + G++ K+ + + A D G Q + +N+ I+DVN + P F SV+I E + + V + +D D G+N R+ + I+ + ++F + +GDI + L+ D F + +TA DH + PL++ ++ + DIN+++P I E+ T+ + D D G NG V+ L S++S + L R + TS T + + LDRE + I + I RD G P S I++++ DVN+ P + + SY++ I E+ PV S+ ++A D D +A++ + D F+I+ G ++++ D E + L + ++++ + I +SD+NDN P L + + ++N+ IG + DPD N +++ L
Sbjct: 561 LNTSTTIAVVLK--DINDNAPTFDKKEYNVTISEEMPRG-SQIITLKA-VDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGEL---KRQDHKVRVEISATDQGGLQ--GRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSS-------QFFRIDPSSGDISVSSDLDREDRA-TFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAAT---ISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLR--VSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFE-QLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFEL---QASSGQLSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPAFDPDQ--NATLEYFL 1037 HSP 6 Score: 94.7449 bits (234), Expect = 3.080e-19 Identity = 88/292 (30.14%), Postives = 140/292 (47.95%), Query Frame = 1
Query: 298 SKGVIQIKPESCDLFVSSRLDREQLCDKSNCIL---QMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL-----EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVK---SING--DIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI 1134
S +I P S D+ VSS LDRE S + S +N T I+V ++ DINDNSP+F +S+ E+ +G S A D DIGPN + Y L P + LF L T S L + K+D E+ + + + A D G L + + ++++DVNDN P F + + + I E++ + TV ++ +D DEG+N +SF I + +L F ++ NG I R + +KF + A + LSS + +V D+N++ P++
Sbjct: 723 SSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILD--DINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRT---SGTLRVSSKLDREQFA--VIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKL----FDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA---SSGQLSSTVPVRIHVSDVNDNKPAL 1000
BLAST of Protocadherin 11 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 149.828 bits (377), Expect = 4.885e-36 Identity = 156/609 (25.62%), Postives = 269/609 (44.17%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISA 2256
V I ++D+NDN+P F S+ V EN I ATD D G N Y++ + L ++ LR ++D + N ++A D + L S + L I++ D+ND+ P + + + + E+ + + V +V D D G NG + + + + + F + +G I K L+ + ++ L +TARD G L++ + + DIN++AP+ K I E + + + D D+ E ++ F IL + L + L R+ + V I D G + +++ + DVN P P IPE P+ + A D D N ++ D+ FF ID G++ + LDRE R ++V +D++ P TS + + + DINDN P+ + + + E++ ++ Q+ D D G NG V + L + + + F ++ GT+ +DRE + I+L I D+G+PSLS +I L ++D NDN P TF E ++ I+ + S S + + A D D +NA+ISF++
Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTG-EVTLRERIDAK---NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED-------FIIDEDSGLIKTTKLLDR-ETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEY---NVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSIL---DIGDQGAILSVSGELKRQ-DHKVRVEISATDQGGLQGRCV--VNVFIDDVNS-APYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASP-PLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQL---FRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAP--TF---EQLSYDLYIAEN----SPVGSTVGTIVARDADEGDNADISFRIFGG 575 HSP 2 Score: 133.65 bits (335), Expect = 3.642e-31 Identity = 144/552 (26.09%), Postives = 238/552 (43.12%), Query Frame = 1
Query: 760 LNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDREL-RPFHPLVVLV--TDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLS----VRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRP 2382
+ I++ DVNDN P+F + +V I+E+ + + V D D G NG+V + + + ++ G++ LR+ +++ + P I A+D LSS L NVIDIN+HAP++I + + EN V + D D G NG + + + F+I E +T K LDRE + ++ + RD G P +T +I++ + D+N+ P + YNV I E++P S + A D D D + + + F I G+ + + EL R H + V + TD R +N+ I D+N P S + E+ + LK D D G N ++ Y+I+ F ++ G I +DRE + + + +D SP L+ +I + + D NDN P F+ SS AA +S V SF+ V A D D N + + ++ + + LF L+ +G L + +L + VL + A D G P
Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSS----GIGGLTIDYSTGEVTLRERIDAKNSP--ITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKM---ITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTT------KLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFD-KKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGR---CVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARI------VYSIDSSQF---FRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSP------------QFTSSSYAATISEDIPVGTSFL-QVSAIDADIGPNGIVDY-FLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP 511 HSP 3 Score: 132.88 bits (333), Expect = 6.166e-31 Identity = 150/570 (26.32%), Postives = 241/570 (42.28%), Query Frame = 1
Query: 442 IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPD-KFHLAITARDHGAIPLSSECKLIFNV-IDINNHAPSIIVKPTLGNKCQIIENT-IGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDAN------LKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLY--ENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDG------TIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEP 2097
I +IDIND++P ++ EN IG A D D GPN + Y++E D + L+ K+ + + RY L +V A D G L + + + + D+NDN P F K +V I E+ + + +K +D E+ ++++ I R FS+ I + + D K + I+A D G + + + + NV ID N AP P +I E++ IG + L D D+G+N ++ + ++ +F I S+ + + LDRE ++ +V + D+ P +T I + + D+N+ P I ED+PV +SF +V A D D N L + S + F +D G L++ LDRE L + D P S + + + +T+SD+NDN P E S+ LY EN ST+G + D D G N + F + K F E+D I + D E + L G LS + + V+D NDN+P
Sbjct: 108 INVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED-----FIIDEDSGLIKTTKLLDRETTARYSL-KVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQI--ITLKAVDNDEDQKITYRIEEAD-----REVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGL----QGRCVVNVFIDDVNSAPYFNDHPF---SVKIPEHSPIGYPVITL-KAEDHDRGDNARIVYSIDSSQFFRI------DPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP-SLSAASEITLTLSDVNDNAPT-FEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGG-------ADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSG--QLSSTVPVRIHVSDVNDNKP 639 HSP 4 Score: 112.849 bits (281), Expect = 1.005e-24 Identity = 130/506 (25.69%), Postives = 237/506 (46.84%), Query Frame = 1
Query: 412 INAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPL-LDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDP--DANLKLTLISDNDG-FFEID----VFGNLKLM--KPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLL 1887
+N T I V ++ DINDN+P F+ + V E G SQ + L +D + +Y +E ++F ++ + L + G++ K+ + + A D G Q + +N+ I+DVN + P F SV+I E + + V + +D D G+N R+ + I+ + ++F + +GDI + L+ D F + +TA DH + PL++ ++ + DIN+++P I E+ T+ + D D G NG V+ L S++S + L R + TS T + + LDRE + I + I RD G P S I++++ DVN+ P + + SY++ I E+ PV S+ ++A D D +A++ + D F+I+ G ++++ D E + L + ++++ + I +SD+NDN P L + + ++N+ IG + DPD N +++ L
Sbjct: 202 LNTSTTIAVVLK--DINDNAPTFDKKEYNVTISEEMPRG-SQIITLKA-VDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGEL---KRQDHKVRVEISATDQGGLQ--GRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSS-------QFFRIDPSSGDISVSSDLDREDRA-TFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAAT---ISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLR--VSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFE-QLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFEL---QASSGQLSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPAFDPDQ--NATLEYFL 678 HSP 5 Score: 94.7449 bits (234), Expect = 3.510e-19 Identity = 88/292 (30.14%), Postives = 140/292 (47.95%), Query Frame = 1
Query: 298 SKGVIQIKPESCDLFVSSRLDREQLCDKSNCIL---QMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL-----EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVK---SING--DIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI 1134
S +I P S D+ VSS LDRE S + S +N T I+V ++ DINDNSP+F +S+ E+ +G S A D DIGPN + Y L P + LF L T S L + K+D E+ + + + A D G L + + ++++DVNDN P F + + + I E++ + TV ++ +D DEG+N +SF I + +L F ++ NG I R + +KF + A + LSS + +V D+N++ P++
Sbjct: 364 SSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILD--DINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRT---SGTLRVSSKLDREQFA--VIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKL----FDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA---SSGQLSSTVPVRIHVSDVNDNKPAL 641
BLAST of Protocadherin 11 vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0]) HSP 1 Score: 132.109 bits (331), Expect = 1.134e-30 Identity = 159/634 (25.08%), Postives = 280/634 (44.16%), Query Frame = 1
Query: 241 IGSNGLNKCQLFD--MTSHDQSKGVIQIKPESCDLFVSSRLD-REQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSII-----VKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPV-KSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDAN--LKLTLISDNDG-FFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTD-NSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEP 2097
+G NG + + D + S D+ G I + P + D + S + R + D + L T ++V +++D P+FE + VE E++ IG +A + G + Y+L+ + E + S + ++ D+EK+ + + T V A +A + S ++I + DVNDN PIF + + E + + + V D+D G G VS+ I + FS+ + G+++ +K L +FHL ++A+D G + + VID + P ++ T I ++G + + GD+ +N F I E T K+ + + LD ++ ++ ++I +P +S + I + D N+ PP I EDL ++ F V A+DKD N ++ ++IS + G EID F G L LD E + L V TD PP R++++ L I + D+NDN P+ + + + EN + +G++ D DS NG++ + + + + F ++E G +++ R IDREV S + + I+ D+G P S + V D NDN P
Sbjct: 467 LGQNGWIRYSVLDTELVSIDKETGRIFV-PNTIDCNIGSEIKFRVRAEDGGSPALS--------TDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQ---NQDEHLTVDTMSGTVCIQKTFDFEKQ--KSYQTTVIATNANSETSTSL--ISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSS------FSINPVTGEVFAQKPLAR----GRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAMSKVKYSIYSGDQDHN------------FSIDE------DTGKIYVTRYLDADVHDTVLLNIQAT---LPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPP--RSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNG--------SEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPP 1043 HSP 2 Score: 112.849 bits (281), Expect = 9.907e-25 Identity = 91/317 (28.71%), Postives = 153/317 (48.26%), Query Frame = 1
Query: 766 ISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI-NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTS-YFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPA-LKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISD-NDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPP 1704
I I D NDN P F + I ED +L++ Y V D D+ +NG V + I + P + + F+ + G SL + + L + A D G P SS L +V+D+N++AP +++EN+ T V ++ D D NG++ ++N S YF I E+ + K+ +DRE++S +++SIV D G+P +S+ S ISV+DVN+ PP+ L + P V+P P++++ ++A D D N + + F + G++ L + L+ L V+V+D P
Sbjct: 825 IFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTG------SLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEF---EKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEYFGIDEKLG------NVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLSITPI--VVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQSSLFVVKSNGDVYLRRQLNASDERHQRLSVIVSDQGVP 1124 HSP 3 Score: 103.605 bits (257), Expect = 7.271e-22 Identity = 133/524 (25.38%), Postives = 225/524 (42.94%), Query Frame = 1
Query: 235 LAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINA----QTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL---EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSII-VKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSIN--------VSIVCRDNGIPVKSTLKSISISV----IDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITIS 1746
+AIGS G + + S DQ I ++ ++V+ LD + +L + A + + QT + +FIE D NDN P+F + + E+ ++ + A+D D N Y++ P + +T S +L DYE + R + RVKA D G S + L I + DVNDN P F K ++ ++E++ V +V+ +D D ENG++ + I + E YF + G++Y ++S++ ++ ++I A D G P SS +V+D+N++ PS + + P + + IG I+ D DKG NG V L R + SS F ++K D L +N +S++ D G+P KS + + + + D+ P K Y IP+ P + AT + L S+ F I + P+ RP + LV++++D N R S+ L + S
Sbjct: 758 IAIGSVGAMSKVKYSIYSGDQDHN-FSIDEDTGKIYVTRYLDADV---HDTVLLNIQATLPSGESNQTQVVIFIE--DHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTGSLL----DYE--ATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSE------YFGIDEKLGNVYTKRSIDR-EVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLSITPIVVPAGSPLSTAIGT-----IVAMDPDKGLNGSV------------LYRAQLQSSLF--VVKSNGDVYLRRQLNASDERHQRLSVIVSDQGVPRKSVVCHVPVRISKGSADIQIQEPFQK----YIEIPKSCPTGCRLTTLNAT----GVSSWLIQSSEISNHFAIREGVLFMISHPIH---RPPYSLVIVLSDK---NDRQKSIQLRVLAS 1229 HSP 4 Score: 98.9821 bits (245), Expect = 1.703e-20 Identity = 166/708 (23.45%), Postives = 294/708 (41.53%), Query Frame = 1
Query: 439 FIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLIS-DNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEP-TSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYV---LKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAI 2538
+ I DINDN+P++ + + N G S+ L A D D+G N Y++ LD EL+ + ++ + +D S F RV+A D G L + L + + D P F K V I EDT + + +V+ + G + R+ + + + E + +V +++G + ++K+ D + T A +S + + D+N++ P I P + E + ++ +D D G G+V SY ++ E F+ + T ++ +KPL R ++ + +D G +I I+VID + P ED+ + V A K +K ++ S D D F ID G + + + LD ++ H V+L + P+ + + I I D NDN P+ + E+L + ++ SD D NG+V++ +I ++ + I D+F G++ +D E T LR+ TD G P S + + V D NDN P + E + + + + S ++ + V A D DS EN I +++ + + F ++ GN+ T + + + ++A D G PP+ S A+ I V N LS+T IV A + +VA+
Sbjct: 428 LLTIGDINDNAPQWHSSQIHISL--NRTQGGSRTL-TAKDPDLGQNGWIRYSV---LDT-ELVSIDKETGRIFVPNTIDCNIGSEIKF--RVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDE------HLTVDTMSGTVCIQKTF---DFEKQKSYQTTVIATNANSETSTSLISIRLKDVNDNWP--IFYPN-EYHLTVREGPKPEEPLLVVSASDMDSGTFGEV-------SYHILSESSSFSINPVTGEVFAQKPLAR---GRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAMSK-----VKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADV---HDTVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEI-DQFTGQLSTGSL-----LDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEF-----EKSWYTMEVLEN----SPPKTIVGKVVARDKDSLENGQIVYRITNGSE------YFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSST-ASARISVLDVND-----NPPSCLSITPIVVPAGSPLSTAIGTIVAM 1069 HSP 5 Score: 97.0561 bits (240), Expect = 6.985e-20 Identity = 171/761 (22.47%), Postives = 290/761 (38.11%), Query Frame = 1
Query: 331 CDLFVSSRLDREQLCDKSNCILQMS-----AFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTR---VKACDAGEDQLCSKLNLNISINDVNDNRP----IFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSID--IPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQI---IENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHL--YENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDE-----------------------------NNQFNFSISSSAARL--------SVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSG 2439
DL V+ +LDRE DK +++ A I ++ IEIID NDN+P F + + N IG ATD DIG NS SY ++ P S + + V S T V A D G L S + I++ + P I+L + S +ME++ L V +V + R+ P+ ++ +YL +D + HL G I + E + + DIN++AP + QI + T G + + D D G NG + + +T I T ++ + +D + S I + D G P ST + ++D PP + IPED P+ + KV+A + + ++ + + D +D G + + K D E + + V+ T+ NS T++ ++I + D+NDN P + P +HL E + + SD DSG G+V + ++ + F +N G +F+ +P+ R L + D G S + I + V D++ P ++ E + NFSI ++ V ++ ++N+QA+ P N I DN P F+ L+ ++ + +L E YV++ ASD + K+ + + SS+ G
Sbjct: 183 ADLVVNGQLDRE-FRDKYELLIEAQDGGKPAKIGQ---LRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKK-------TSAPSNSNFAISQSGVITTTASLLPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQYRDTKLRLIGSSALCPQ----------QTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQIII--EHPQLLTIGDINDNAPQW-------HSSQIHISLNRTQGGSRT--LTAKDPDLGQNGWIRYSVLDTELVSI------DKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATN---ANSETSTSLISIRLKDVNDNWP-IFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESS--------SFSINPVTGEVFAQKPLAR---GRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAMSKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADVHDTVLLNIQATLPSGESNQTQVVIFIEDHNDNPP--QFSSSLVEISIREDLKLHEPFYVVQ--ASDKDK----KKNGEVRYSIISSHPG 882 HSP 6 Score: 82.4185 bits (202), Expect = 1.636e-15 Identity = 153/675 (22.67%), Postives = 273/675 (40.44%), Query Frame = 1
Query: 430 IKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPN-SVHSYTL-----EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHT--PENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFH-LAITARDHGAIPLSSECKLIFNVIDINNHAPSI-IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPAL---KVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDREL-RPFHPLVVLVTDNSPPNSRTT-----SLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIK-------DKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYVLKMMASDNG 2376
I + +E+ D NDN+P F +E E +Q+G S LP TD D GP VH + + + L LV+ G++D E + L ++A D G+ +L +I I D NDN P+F + + + + + + V D D GEN R+S++I T P N F++ S +G I SL +P H + + A DHG+ LSS + V+ +P + I+ N ++EN+ + VA + + + + +L + + + + L++ LDRE S ++ + +G + + ++I D+N+ P ++ S N + T KDPD +G+ V + +L+ +D+E R F P + S R S AL+ + + D + +P F + Q+++ + VK + ++ N K I+ + V+ GT+ + D E ++ T+ S + + I LK D NDN PI+ +P N+++ ++ E ++ V ASD DS +S+ ++S F++ +TG + L+ G + L + A D G
Sbjct: 106 IDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGD-GPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELL--IEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSN----SNFAI-SQSGVITTTASL----LPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQYR------DTKLRLIGSSALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQIIIEHPQLLTIG--DINDNAPQWHSSQIHISLN--------RTQGGSRTLTAKDPDLG--------QNGWIRYSVL-DTELVS-IDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFE--------KALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNANSETSTSLISIRLK--DVNDNWPIF-YP----NEYHLTVREGPK----PEEPLLVVSASDMDSGTFGEVSYHILSESSS------FSINPVTGEVFAQKPLARGRFHLVVSAKDGG 717 HSP 7 Score: 80.8777 bits (198), Expect = 5.289e-15 Identity = 173/709 (24.40%), Postives = 291/709 (41.04%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEY-TSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVK--------SINGDIYLRKSLN-SIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI-IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTF-------KLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYN--VIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPL----DRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESF-----IVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTN-------GELSEGLYVLKMMASDNGRPPKHS---KDATLYIKVYSSNSGFF 2445
V + + D NDN P+ + T +E E+S++G A+D+DIG N S+ L L D + P + LVLR S + + +++ D G L + NL IS NR + + ++ T L+ +DEG R F PE LA +S+ S++ + +R +L +I +++ L + G ++ V ++N++ PS + KP ++ EN + VA + D D L+ YF++ + T + F + + PLD E++ ++I D T +++I V D+N+ P +P Y V P FAK+ A D D L +L + F + MK L +R L + V TDN P S +TS+ +++ I + E F + NS IG L++ + L+G+ + H Y I D K F + G +F PIDRE + ++ + ++ S + K + V DENDN P++T S A LS+++S I + ASD DS EN +S++++S NI TL TG++ N E + + + A D+G P + + +L + +S ++ FF
Sbjct: 1713 VRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFSFEL--LEDSSGSLDLVPETGDLVLR-----RLSSLQSWKIKLRVVDHGVPGLYVEKNLEIS------NRNPQTEAKAPLEFLKQTYLST---------IDEGLP-RGQFIAKLQPE--LAGLTYSIVEGNIDSAFSVDSEGVIRTNLELDREILERYSLKVIGTGSGQ---QIGTRVDVRVNNLNDNVPSFPMSKPR-----RVPENLRVGSYVATVGAKDVDN---------LAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATDGSF---DTFTNLTIFVSDINDNAPTFS-KPLYQTTVSPATFSPGQPFAKIEAHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLPPAGERYL-----VTVTATDNGVP-SFSTSVPVSVIIGEAEPTDKPGFEKAEFRF--EVMENSKIG-LQIGN----LSGE-ESREFH-YRIQDPE-ASKIFSIDKFGRLFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVFT--------------SVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNI----VTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFF 2341 HSP 8 Score: 69.3218 bits (168), Expect = 1.838e-11 Identity = 106/460 (23.04%), Postives = 191/460 (41.52%), Query Frame = 1
Query: 466 NSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSIN---GDIYLRKSLNSI--DIPDK-FHLAITARDHG--AIPLSSECKLIFNVIDINNHAP---------SIIVKPTLGNKCQIIE--NTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRD-NGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLL 1776
+ P FE F E ENS+IG L + H +P +++ + +L + G +D E+++ F + ++ K + + + D NDN P+F + + + Q + Q++ D D GENGRVS+ I L+ ++ ++N G I L + ++ + P+ + + + ARDHG A + ++ + + AP ++ ++G Q I N +GM L+ K + GK+ ++ T +L +K LD E I++ + D NG +S + + I V V+E+ P + SY + IP P S ++ A D+D + + ISD +I+ G ++L KPL + +V +SP T++ L I D+ ++PKLL
Sbjct: 2127 DKPGFEKAEFRFEVMENSKIG----LQIGNLSGEESREFHYRIQDPEA---SKIFSIDKFGRLFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCH--VIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRI-------LSGNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSL---KEHQGKLGIDV----------------KTGELTLKTHLDWESEPIISMYLSVSDGNG---RSAVVPLKIVVEPVDEFAPVF-TKSSYTLQIPISTPAGESVGQMQAIDEDGGVHGVVKYSISDRQSTVKIEEHTGIIRLQKPLVSRRNLTIEQITVVAYSSPTKQSKTTVYLEIGPFDVQPSLPKLL 2547 HSP 9 Score: 65.0846 bits (157), Expect = 3.155e-10 Identity = 127/619 (20.52%), Postives = 254/619 (41.03%), Query Frame = 1
Query: 337 LFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLAT----DID--------IGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVN-DNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSID-IPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVN-----------CELSNTSYFVILERW------EFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPA-LKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLN--GNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPI--DREVTSEIILRILLTDQGSPSLSHEEKIVLKVA 2076
+ +++ LD E L + + I + T + +F+ DINDN+P F + S +S P A D+D +G S + + P + PP RY +T V A D G + + +++ I + ++P F K +ME++++ + + +G S E ++ ++ A + FS+ G +++ ++ +F + I + + +C +I V+D N++ P V ++ + ++ + IM +D D G NG+V+ L+ + + L W EF ++T++++++ RD+G P ++ + + +S+ + A V P Y V + ED V + K+ A+++ N L + ++ G IDV G L L LD E P + + V+D N R+ + L I + +++ P + +S+ L ++ ++GQ++ D D G++G VK Y+I+D+ + + E G I +P+ R +T E +I + SP+ + + L++
Sbjct: 1984 IHLTAPLDFEVLPEHTLTIKATDGSFDTFTNLTIFVS--DINDNAPTFSKPLYQTTV---SPATFSPGQPFAKIEAHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLPP---------------AGERYLVT-VTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNL---------SGEESREFHYRIQDPEASKIFSIDKF-GRLFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVI--VLDENDNLP---VFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVE----------------ARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSLKEHQGKLGIDVKTGELTLKTHLDWESEPIISMYLSVSDG---NGRSAVVPLKIVVEPVDEFAP-VFTKSSYTLQIPISTPAGESVGQMQAIDEDGGVHGVVK------YSISDR--QSTVKIEEHTGIIRLQKPLVSRRNLTIE---QITVVAYSSPTKQSKTTVYLEIG 2535 HSP 10 Score: 52.7582 bits (125), Expect = 1.852e-6 Identity = 37/127 (29.13%), Postives = 64/127 (50.39%), Query Frame = 1
Query: 1522 FAKVIATDKDPDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL--LEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIH 1893
F +++AT ++ + N F I+ G++ ++ PLDRE H L++++TD SR S + +T++D NDN P+L P+ + E+ + + + SD D G NGK F L+
Sbjct: 1650 FKRILATGMTEESRFRF---QGNAPKFSINSTTGSISVL-PLDREASQEHLLIIILTDG---GSRNDSCTVRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFSFELLE 1769
BLAST of Protocadherin 11 vs. Ensembl Celegans
Match: cdh-4 (Cadherin-4 [Source:UniProtKB/TrEMBL;Acc:A0A1C3NSI5]) HSP 1 Score: 115.161 bits (287), Expect = 2.158e-25 Identity = 162/668 (24.25%), Postives = 281/668 (42.07%), Query Frame = 1
Query: 460 NDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLL-DLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLT---RVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVE--PSYNVIPEDLPVNSSFAKVIATD-----KDPDANLKLTLISDNDGF--FEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSP-----PNSRTTSLALNITISDINDNIPKLLEPTSF-HLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFS--IRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESF---IVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYVLKMMASDNGRPPKH 2391
N +SP F +VE E++ IG A D D G N Y + + E++ +S ++ + + K L +V A DAG S + + I DVN++ P F + + +RI E+ + + +++V D D G NG++ F + + N+ S+ + G + L KSL+ D D AI A D G S L +V D+N++ P +V+ + + +I E+ V+ + D D G N K+ L++ ++ + F + PLD N+SI D+G P+ ST + + ++D+ A++ + + E+ + + + A + K NL+ +I DG+ F ID G ++ LDRE + + + V D+ P R L + I I D ND+ P +P + EN N I +++ +D D N L+ + I + F ++ G I + IR +DRE SE L + + D G P L +++ V DENDN P +T + SVR F + + A D D ENA +++ + F+++ + + + Y L + A+D+G P +
Sbjct: 602 NKHSPVFSSFPEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGSSHEVLTVDEQSGEITVASDLSKLMKEKLEVLDVQLKVSAIDAGTPVKSSVKTMKLRIKDVNNHSPQFDEVSYYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGN---NQEKSSVISIDAKTGIVKLLKSLDRED-QDVHTFAIIASDEGFPMRVSVTNLTISVEDVNDNPPKCVVQHS---RARIPEDLPHGAFVSCMAAFDEDIGQNSKLKFLLNSEKVPFRIDH--HSGCIFIHAPEYPLDYHKTPFFNLSIEVADHGDPILSTSCHLHVELVDIAHNHLAIEFDDVAKEASVYENSEIGTEVIMIEAKETGDEQKVKAENLEYRIIG-GDGWPHFSIDQKGTVRTTHLLDRETKSAYWITVEARDSKTDLYKDPRRRDV-LHVFIRILDRNDHRPVAKKPMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLM---FKIERGDPQSFFRIDLTSGYITTSGIRRLDREKQSEHELWVSICDGGEPQLCSNVIVIVNVLDENDNSPTFT--------------QAIHHYSVRSKFAGKLCRIFAVDADEGENARLTYNITEGDA------RFSIDNNGNIIASEAIHGDESYALTVQATDHGTPGQQ 1235 HSP 2 Score: 110.153 bits (274), Expect = 7.326e-24 Identity = 159/638 (24.92%), Postives = 266/638 (41.69%), Query Frame = 1
Query: 337 LFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQI--GYSQELPL---ATDIDIGPNS--VHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGED-QLCSKLNLNISINDV---------------NDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDI--------YLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGF-FEIDVFGNLKLMK----PLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQ--LKVSDPDSGLNGKVKFLLIHAYTINDKLIKDK---FFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGS-----PSLSHEEKIVLKVADENDNEPIWTFP 2112
L VS++++R + I + V IEI+D ND++P F ++ + I G ++ + ATD D G N V+ +T E L++ + ++ L V+ KK N + T V A D G S LNL N N + P+F E V + ED + V ++ D D G NG + + I+ + + +V +G+I +++ L +D+ L ++A D G SS + + D+NNH+P + +I EN + + D D GNNGK+ L N + + + KL+ K LDRE +I+ D G P++ ++ +++ISV DVN+ PP V+ S IPEDLP + + + A D+D N KL + +++ F ID + PLD PF L + V D+ P +TS L++ + DI N +E ++ NS IG + + ++G KVK A + ++I F + GT+ + +DRE S + + D + P + +++ D ND+ P+ P
Sbjct: 445 LRVSAKINRSERVYNFKVIASLHGINEKLAEKDVSIEILDSNDHAPVFS-----AKWMRQTPIVIGKPGDVLVKVDATDQDEGENGKIVYKFTSELPLEI------NANTGEITL---VEVPKKGNSWPAT-VWAIDLGLPLSRMSALNLMFYKNGTKIPAKPKPIIIQESENKHSPVFSSFPEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGS--SHEVLTVDEQSGEITVASDLSKLMKEKLEVLDV----QLKVSAIDAGTPVKSSVKTMKLRIKDVNNHSPQF---DEVSYYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGNNQEKSSVISIDAKTGIVKLL--KSLDREDQDVHTFAIIASDEGFPMRVSVTNLTISVEDVNDNPPKCVVQHSRARIPEDLPHGAFVSCMAAFDEDIGQNSKLKFLLNSEKVPFRIDHHSGCIFIHAPEYPLDYHKTPFFNLSIEVADHGDP-ILSTSCHLHVELVDIAHN-HLAIEFDDVAKEASVYENSEIGTEVIMIEAKETGDEQKVK-----AENLEYRIIGGDGWPHFSIDQKGTVRTTHLLDRETKSAYWITVEARDSKTDLYKDPRRRDVLHVFIRILDRNDHRPVAKKP 1049 HSP 3 Score: 108.227 bits (269), Expect = 3.004e-23 Identity = 198/786 (25.19%), Postives = 336/786 (42.75%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHI------IKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKF--EYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL---EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQT--VYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINV-SIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSS----FAKVIATDKDPDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVN--EDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKL--ISAFKDNIPVYLFTLELMTGNLGTNGE--LSEGL-------YVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
V E+ VG +IG + I + + I G + F S ++S G I +K S LDRE+ ++ ++ A V ++I D+NDN+P F +Y F + E++ +G S + A D D P+ ++L P DL E S L + ++D EK + + R A D G + L I ++DVND+ P F K E I D L T + +KD D N F I E + F + S N D+ L++ ++ ++ L +TA D G S++ K I++ + S I P + EN+ T +++ G N ++ + FV+ F + K+ +D E + + +DN K I++ + ++N+ P + +E V I E+LP + +++A D D D +K ++ D G F+ID + G + ++KPLD E+ F L V+ +D + T + +T+ D NDN P + T S + E+ + + + S D N +++ L + + FVN G + +P+D E S + L ++ D G P L E ++ + V DENDN P + E ++ + + S ++ V+A D DS +S++L +S + PV F + +NG+ +S+ + Y LK++A D GRPP S +A L I V N
Sbjct: 2617 VMEDADVGNVIGRVQQMETEIDEIRFTI-VPGSEESDSFLPFSVERSTGKIIVK---------SSLDRERK-NQWKMTIRADAAGGVHAITTVTVDIGDVNDNAPAFHGDYERFTIS--EDAAVGTSVTIFSAMDRDDSPSGRIRFSLVEENPYFDLNE------NSGWLTVASQLDREKIDHYKLIAR--ATDEG--GFNTDLPFTIVVSDVNDSPPQFEK--EEFNI--DLHLPSTSPILHFSIKDDDLSPNNVSQFFIPKGNEEGV----FWIDS-NNDLLLKRP-EIVENKMQYQLKVTAFD-GVFETSTKVK-----INLKSSKDSDIRCPEANKTVILAENSKKGT---VVLGESSLLGPNVTFKLSDNDGNVFVV----NFRNGIVKVKESDQIDYEKNQQLEFHRLTIQDNSEVCKEL---ITVVIENLNDNRPKI-IEKLLKVSIDENLPTSEDARQYITRIVAEDADFD-EIKFRMVDDFGGLFQIDDINGVVTVVKPLDSEILGFFNLTVVASDGEFEDKAT----ILVTVIDQNDNAPTFEKSTYSMKVMESESIGYELAHFRASGGDQ--NETIEYYLKPSDVTS--------FVNLNAQTGILTLAKPLDFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKF-----EKEKYVGKVKEN----SKSGEKVLTVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFA-------INSNGDVLISQSIDYEKIKKYNLKVIAKDGGRPPLRS-EALLEIHVEDEN 3320 HSP 4 Score: 82.8037 bits (203), Expect = 1.649e-15 Identity = 139/611 (22.75%), Postives = 266/611 (43.54%), Query Frame = 1
Query: 667 KVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLK------CNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRY---FSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPD----ANLKLTLISDNDGF-----FEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIG----QLKVSDPDSGLNGKVKFLLIH-----AYTINDK---LIKDKFFVNEDDGTIFSIRPID-REVTSEIILRILL--TDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSP-ENANISFKLI--------SAFKDNIPVYLFTLELMTGNLGTNGELSEGLYVLKMMASDN 2373
++DYEK F R+ D E +C +L + + I ++NDNRP ++ +E++ ED + Q + +++ +D D E + F R+ + F + ING + + K L+S +I F+L + A D + ++ VID N++AP+ K T K E +IG +A + GD+ + + S+ + FV L + T L + KPLD E +S++ +++V +D+G+P T + ISV+D N+ P + E + E+ V A D D + + +L ++S+ F I+ G++ + + +D E + L V+ D P R+ +L L I + D ND+ P + L + IG + VSD D NG + I ++ +N+K L K + D + ++ D + T++ L I + T + +P++ +P+ I + + + E I ++ASD D +N + F L+ + +++ +LF ++ TG++ ++ +++GL+ + +D+
Sbjct: 2970 QIDYEKNQQLEF-HRLTIQDNSE--VCKEL-ITVVIENLNDNRPKIIEKLLKVSIDENLPTSEDAR--QYITRIVAEDADFDE---IKF--------RMVDDFGGLFQIDDINGVVTVVKPLDS-EILGFFNLTVVASDG---EFEDKATILVTVIDQNDNAPTF-EKSTYSMKVMESE-SIGYE-LAHFRASGGDQNETIEYYLKPSDVTSFVNL-----NAQTGILTLAKPLDFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSGEKVLTVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFAINSNGDVLISQSIDYEKIKKYNLKVIAKDGGRPPLRSEAL-LEIHVEDENDHAPTFDDCNMTALVQE---GEAIGHRLLKFSVSDLDGPKNGAPFTVEIQGDGAKSFKVNEKLELLTAKKLEYRKKDKYLLTVIAKDVKGKTTDCPLTIFIRQTSRHAPTM----------------KPM-------------KIQINTLQNELPEGIIGRLKASDEDEEDQNGLLRFGLVEGSIQSPRAQVQESRSTHLFRVDPNTGDIWSDHSITQGLHTFNVTVTDS 3518 HSP 5 Score: 73.1738 bits (178), Expect = 1.379e-12 Identity = 147/683 (21.52%), Postives = 286/683 (41.87%), Query Frame = 1
Query: 295 QSKGVIQIK------PESCDLFVSS-RLDREQLCDKSNCILQMSA--FINAQTWIKVFIEII---DINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLD-----EGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPD---KFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTV-ALIMVTDGDKGNNGKVNCELS---NTSYFVILERW--EFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDG-FFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNS-PPNSRTTSLALNITISDINDNIPKLLEPTS-FHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLI 2250
+SKG+I + P S D RL+ ++ ++N ++ A + K +EII I ++P FE + E++ IG AT D N Y+L D+ P + + + G++DYEK + +Y L V A +G+ Q+ S+ + I DVND P F++ + S +I + Q + + D+D + E+ ++ ++I E F++ G++ L + + D+ + K L ++ D ++ KL+ ++ + P P + + N + T V ++T KG + L+ +++ E W T ++ + + L+ + +V D + ++++SVID+N+ PP V P Y+ I E + V ATD D + ++ +L+ ++ FF + G + + K L+ + L + TD++ PP+ TT++ +NI + +P+ F + E+ + + IG+++ + + +++F ++ +D + F V G I +DRE ++ + I G + + + + D NDN P + + F+IS AA V S + A D D + I F L+
Sbjct: 2113 KSKGLIGYRILDKKSPFSVDFLTGEVRLNNLKMLAETNYTFEVEAREVTRPKMIAKAQVEIIVKSGITTHAPVFEKLKYTASTPESTSIGQRLLTIKATTSD--ENDTIEYSLSGSKDI----EIHPETGDVTITGQLDYEK-TQKYDLKLV-ATSSGK-QVSSEAEFIVLIEDVNDEMPEFIRSDVSAKISDSAITGQFITIMSATDMDTTNSLDEESQKLLYKIVDGDET-----LFNISPATGELSLARPVEQDDLVNEDTKKVLNVSVTDG---MFTAYAKLVVEILRSGSMQP-----PPRFEQSHYVANALENTIVNKSALLTVAVKGGVPPLQFSLAPTTSSNSSTSKEAWPVAIDRKTGRIHVSRVLNYHRDKRYQIPLVVED--ATGRRAFSTLTLSVIDINDKPPFF-VLPFYSTSISESAKEGDTVMMVSATDDDENDTIEYSLLDGSESQFFSVHPRQGTITVAKKLEHKAGVTLSLTIKATDSANPPHHATTTVEVNIASESV--KVPRFSNSHYLFSVMEDADVGNVIGRVQQMETEI---DEIRFTIVPGSEESDSFL--PFSVERSTGKIIVKSSLDRERKNQWKMTIRADAAG--GVHAITTVTVDIGDVNDNAPAF-----HGDYERFTISEDAA---VGTSVTI-FSAMDRDDSPSGRIRFSLV 2752 HSP 6 Score: 58.151 bits (139), Expect = 4.195e-8 Identity = 116/520 (22.31%), Postives = 204/520 (39.23%), Query Frame = 1
Query: 307 VIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTW--IKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLL-DLFEL--------MYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFH----LAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTI-GMTTVALIMVTDGDKGNNGKVNC---ELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAK-------VIATDKDPDAN--LKLTLISDND-GFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLAL-NITISDINDNIPKL 1773
V ++ ++ L ++ ++ +L + L +S + Q W V I++ PKF + + Q S+ + + T I S S +PL+ +LF + + P S +++ +DYE + +V+ + + S +++IND NDN P F+ + E ++ + V D D GENG V++ I E L F + + +G++ L K L+ P+ H L I A D A L E L I +N AP + + ++T G + L + G + NC E+ S V L W KL +K ++ +IV G + + + +I N++ P + + I E++P SS V A D+DP +N + ++S D F +D + G ++ D E + V D P R+ +L +T+ D ND P+
Sbjct: 1308 VFDVRQDTGQLLLAKKV---ELLKRGELRLNISV-TDGQAWDHSTVIIQVSRQISQRPKFSASHY--------QTDVSERVAVGTQIYTLKASGESLGTKPLVFNLFSVDDVAMEDKIRVEPSSGNVIVMEPLDYEAARRIRAVVQVQQAN-----MKSFATFSVNINDENDNSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESL----FKIDAKSGEVRLAKPLD----PELQHVESILRIRAIDSAANSLKDEMSL---HIRNSNEAPETAKFDRKVYQTTLYDSTRPGTPVLVLNALHHGTVSYKLEPNCTFFEVHTLSGAVHLATW-----LTKLKHRKSVE-------CTAIVESTEG---QQDIAKVIAKIIRTNQHSPIFRRQVYRGTIRENMPTGSSVLSKSLLPLVVSAIDEDPGSNGLVGYRMLSPKDEQMFSVDQYSGAIRTQMSFDFEKMKEYSFYVQAFDMGQPPRRSLMPSLIVVTVIDENDEPPRF 1784
BLAST of Protocadherin 11 vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 112.849 bits (281), Expect = 1.018e-24 Identity = 136/503 (27.04%), Postives = 217/503 (43.14%), Query Frame = 1
Query: 727 AGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI-NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDK---FHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDK--------GNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNG----IPVK--STLKSISISVIDVN----EYPPALK-------VEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-----ISDNDGFFEIDVFGNLKLMKP---LDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEP---TSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKD-KFF--VNEDDGTIFSIRPIDREVTSEIILRILLTDQGSP-SLSHEEKIVLKVADENDNEPIW 2103
A ED S ++L I I+DVNDN P F + + ++ ED LNQT+ +V D D G+N R+++ + NH FS+ S NG+I + L++ + ++ + +TARDHG P+S + ++ N + S + PT + E+ G T V I D D+ NG+ ++ + F I E + + E + IN++++ +D+G P K ++ ++ I + DVN E+P K +E +Y P + KV ATD D AN + S++ F ID + P DRE RP + V TD ++ + DINDN P+ P TS +E + G S I D D+ N ++ + L T ++ D FF VN G I I+PI + T + I ++ D G P +L ++ L V D+ P W
Sbjct: 617 AREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHN---------FSINS-NGEISAKVRLDADQLNERHFVYRFNVTARDHGE-PVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKM---NLFSIDEHTGLVK--LRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDP------PTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRG-DRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAV-GTSVITVFAF-DNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMK-TQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKW 1093 HSP 2 Score: 100.908 bits (250), Expect = 4.634e-21 Identity = 180/740 (24.32%), Postives = 315/740 (42.57%), Query Frame = 1
Query: 316 IKPESCDLFVSSRLDREQLCDKSNCILQMS-AFINAQTWIKVFIEIIDINDNSPKFE---YTSFVVEFYENSQIGYSQELPLATDIDIGPNSVH-SYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKS---NRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQT------VY--QVLVKDLDE--GENGRVSFEINHTPENRL--ARRYFSVKSINGDIYLRKSLN-SIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENT--IGMTTVALIMVTDGDKGNNGKVNCELSNTS--YFVILERWEFTSSTFKLIIKKPLDRELMS---SINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPD--ANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK---LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDG----TIFSIRPIDREV-TSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKV 2421
++ +S +FV LD E D+ + +L S NA T V+I I D+NDN+P+FE Y + V+E E+ I ATD D S Y LE E+ S + L +D + + + F+ V+A D + L ++ +++ D+NDN PIF + R+ + N+ VY V +D D+ EN + + I N+L F + G I+ +SL+ I +F + + A D G + V D+N++AP G+ +E T IG ++ ++ + +LS S ++V ++ SS L +K+PLD E ++ ++ I D ++ ++ ++++D N++ P + + V ED+P +S + ATD+D A ++ SD F ID G L++ LDRE + L++ DNS R + + + D+NDN P+ + P F +N T +++ +D D+ G + + + + F N D G TI ++ DRE IL I L +E + + + D NDN + + + ++S RL +E+ I V D D + + +F ++KD+ P + + + G++ GE++ G Y + DN R +DA Y+ V
Sbjct: 1384 VRTDSGTIFVKEPLDFE-ASDQYHLVLIASDGRHNATT--NVYIHIEDVNDNAPQFEQQKYATTVIE--EDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQ-GADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFV--VQAIDDDGNGLVGYADVQVNVRDINDNSPIFPE-----RLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGI---VRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGS----VEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEA---AVHVALVDRNDHAPHIHGATEHRV-REDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYDNSNNIGRQM---VAVYLQDVNDNGPEPYTVPRPCIFRENTPVNQLGTC-EIRATDRDTAEFGPPFTMEVSPSFKYSQYLNVIFNANGDGGNGSMTITPLQEFDREAPVPGKILEIPLILADRAGRRNEASVHVIIGDLNDN-------TMHDGRMTIHVNSYLGRL--KETVIGRVYVDDADDWDLGDKTF----SWKDSRPGFELSDK---GSITMAGEMAAGTYTMSANVHDNAR----DEDAVGYVTV 2075 HSP 3 Score: 100.908 bits (250), Expect = 4.793e-21 Identity = 142/626 (22.68%), Postives = 262/626 (41.85%), Query Frame = 1
Query: 328 SCDLFVSSRLDREQL---------CDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIME-DTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNS---IDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILER-------WEFTSSTFKLIIKKPLDRELMSSINVSIVCR--DNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDA--NLKLTLISDNDGFFEIDV--------FGNLKLMKPLDRE----LRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEP 2097
+ ++F + + DRE++ D+S L + N +KV I I D+NDN+P FE ++ E+ G+ A D+D +S Y L S + ++ +D+E S++Y L + A + + + N+ I I DVNDN P F + + ++E D + + ++ V D D+ E S I + E + A F + +G I L K+L+ +P ++ + A D L + NV DIN+++P I L + I V + V D + E +N Y ++ + + +T K+ + LDRE+ S I R D G+P + +++I V D+N+ P + + E P+ ++ A D D +A N+ +S+ +F + G L++ +PLD E FH L + V+D A+++ + D ND+ P + T + E++ ++IG+ +D D+G + + IN + + F + DGT+ +DRE + + +++ + + + + + + D NDN P
Sbjct: 1277 TGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDN-VKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLD--KHSNLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEA-SDQYHLVLI----ASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEK---SSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVP-SWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSP--IFPERLFGYIEENREPIHSDGVYFMDVQARDFDD---PTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFH-LGIRVSD----GRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPRGTSIGRYTATDRDAGDTAR--------FRINRQSDPKRQFTIDQDGTLRVAHTLDREDIA--VYNLIIEAYDNSNNIGRQMVAVYLQDVNDNGP 1870 HSP 4 Score: 92.8189 bits (229), Expect = 1.256e-18 Identity = 158/714 (22.13%), Postives = 293/714 (41.04%), Query Frame = 1
Query: 415 NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTR--VKACDAGED-QLCSKLNLNISINDVNDNRPIFLKCNE-SVRIMEDTQLNQTVYQVLVKDLDEGE--------NGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDK---FHLAITARDHGAIPL------SSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMT--TVALIMVTDGDKGNNGKVNCELSNTS-----YFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDND-----------GFFEI--DVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE----PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKF-----FVNEDDGT-IFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEP-----IWTFPSDENNQFNFSISSSAARLSVRESFIVNVQA--SDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASD 2370
N ++ + + I I D+NDN P F + + E+ + + A D D G NS +Y+++ ++ + ++ + ++D ++ + R+F+ R V A D GE L S ++I + ND +FL ++ + + ED Q V Q+ +D D E NGR + ++N FS+ G + LR +++ D+ + +L + +D G+ + +S L+ + D+NN+ P + +I+E T T+ + TD D NG + L T FVI + + + ++ DRE +V++ D G S+ V+D+N+ P + PSY + V +S V A D D N ++T + D FFE+ G + L+KP+ + + F V+ DN P + +S + + + D PK + EN+ N I + + N V + L + +K + KF F N ++ + + +D E + L + TD S ++ + V++V D ND P ++T DE N + + + IV V+A +D D P+N + ++++ + F ++ +TG + N + +Y+L + ASD
Sbjct: 621 NRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVD------NHNFSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMN----------LFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVV----FDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFE-RPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKF-IFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKA-ESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTS-RVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKP------IVTVKAIDTDSDGPQN-EVHYRIVGE-ANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASD 1302 HSP 5 Score: 90.8929 bits (224), Expect = 4.576e-18 Identity = 167/728 (22.94%), Postives = 311/728 (42.72%), Query Frame = 1
Query: 442 IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLE----------PLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAG-EDQLCSKLNLNISINDVNDNRPIFLK---CNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHT--PENRLARRYFSV-KSING----DIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMV-TDGDKGNN-------GKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGI--------PVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVF---GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEP--TSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDRE----VTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSP--ENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL-----SEGLYVLKMMASDNGRPPKHS-KDATLYIKVYSSNSGFF 2445
+E++DINDNSP+FE S+ +G S A D D N+ +Y+LE LD FEL+ RS ++ L + + + F+ V A D G + L S + +++ D P + C + + E+ +LN+ + + + N V +++ + P N+ ++ K NG ++ + + L+ + + + L +TA D + ++S + V D+N+ P V G + +E T G V + + TD D N G+ N E T +F I E T ++ + DRE + +++ D + P K +K + I + DVN+ P+ + + + E + A D D +NL+ LI G V G + + +PLD E + LV++ +D ++ TT++ I I D+NDN P+ + + + E+++ + + +D D + K ++ Y + + + F + + GTI ++ +DR+ V S + + D G+ + + + + + V D NDN PI FP F + I + + + ++VQA D D P ENANI + ++ N +F ++ TG + L SE +++++ A+D G P + + T+ + + N+ FF
Sbjct: 967 VEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNR--RSGEITLIKPIPMKTQK---FIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQV-NNYTLTLTATDMTS-RVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGE--ETKHFRIDEL------TGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVK-VQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGR--HNATTNVY--IHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ--DEKSSRIV---YRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYAD-VQVNVRDINDNSPI--FPE---RLFGY-IEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLIN-GESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFF 1661 HSP 6 Score: 89.7373 bits (221), Expect = 1.056e-17 Identity = 162/689 (23.51%), Postives = 279/689 (40.49%), Query Frame = 1
Query: 424 TWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPL-----ATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGK----------VDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSF--EINHTP--ENRLARRYFS-VKSINGDIYLRKSLNSIDIP---DKFHLAITARDHGAIP--LSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENT-IGMTTVALIMVTDGDKGNNGKVNCELSNT--------SYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSF----------AKVIATDKD-PDANLKLTLISDNDG----FFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNS--------PPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNS-TIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENAN-ISFKLISAFKD---NIPVYLFTLELM 2301
++ + I I D+N+N P+F + + + + Y + P ATD D N Y+L YT S K + + V +++++ VKA D G+ L ++ + D+NDN P F + + + + +V V D D N +++ EI+ T E++ +F V +G+I L K IP KF + A D+G IP L S ++ NV+D AP P + EN + + V+ GD N V +L+ + S F ++E + +++I + LD E +++ +++ D V ST K+ + V DVN+ P V+ I E++ N K I TD D P + ++ + +G F ID + G + + DRE + L V +D S PN ++ + I I+D+NDN P E + G + +K D D N +++ LI A + F V D GTIF P+D E + + L ++ +D + ++ + + + D NDN P + E ++ ++ + + NV A+D D E ++ I ++L D I Y T+EL+
Sbjct: 847 SYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSL---------YYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKP-----IPMKTQKFIFNVIADDNG-IPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDS-RNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVAST-KTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNK--DNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSN--LRYHLIGA-----GGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGRHNATTN---VYIHIEDVNDNAPQF-----EQQKYATTVIEEDVDIP---KVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELV 1498
BLAST of Protocadherin 11 vs. Ensembl Fly
Match: ft (gene:FBgn0001075 transcript:FBtr0077478) HSP 1 Score: 218.009 bits (554), Expect = 5.761e-57 Identity = 198/728 (27.20%), Postives = 336/728 (46.15%), Query Frame = 1
Query: 355 LDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSV---HSYTLEPLLDLFELMYTPPRS-----LKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHL-----------AITARDHGAIPLSSECKLIFNVIDINNHAPSIIVK--PTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL--TLISDND-GFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPS-LSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSV-----RESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGL-----YVLKMMASDNGRPPKHSKDATLYIKVYS 2427
LDRE + D + ++ S I+V I+++D+NDNSP+F S + F E++ G L ATD D+G N V + + + F L+ T S L L G +D E + + + + A D G L +N++I DVNDN PIF + +V + E V V+ D D G+N ++++ + T F+V G I + +N P + ++ + ARDHG+ + N++D N+H P I + P G + EN + T VA + V D D G NG+ + + + + R E + + + LDRE + N+++V D G P ++T + I V DVN++ P + V+ E P S A + ATD+D N ++ ++S N+ +F +D + G + PLDRE+R L + D PN + L + I D ND P+ + + L E+ + + + +D D G NG V F L + ++L +F ++ G + + RP+DRE S+ + ++ DQG+P+ S + L VAD NDN+P + +P + +S++ + + +E +++V ASD D +NA I ++L S + LF L+ +G + G+ + Y L + A D G+ + +DA + I + S
Sbjct: 118 LDREGMRDHYDLVVLSS---QPTYPIEVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGS--YQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYYLAET------EHQFTVNPETGVISTTERVN---CPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHF-RLEEAADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGG-PNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSV---ERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQF-YP----RHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGEG-----LFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAGQ-RRSQQDAIVEIVLKS 815 HSP 2 Score: 196.438 bits (498), Expect = 3.453e-50 Identity = 214/802 (26.68%), Postives = 348/802 (43.39%), Query Frame = 1
Query: 208 IGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQ-TWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL--EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARD------------------------------------HGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILER----WEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT---LISDNDGFFEI-DVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENL---NGNSTIGQLKVSDPDS-GLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRE-----SFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
IGH I + A + L M HD G ++P + L ++ LDRE KS L++ Q T I++ D NDN P FE T + + EN+Q GY +A D D+G N+ SY + + D+F L P++ L L ++DYE+ ++++ V+A D G+ L + + + ++ D+NDN PIF + S + E+ + V V KD+D G NG + + I + F + S NG I R++L+ + + L +TARD LSS K+ + D+N+ P I N+ I+EN T V + D D+G NG ++ + + + + + +L + LDREL SS ++I RD G P +ST + I ++D N+ P + + E+ + + +V ATD D AN ++ ++ D + F I + G +++ K L+ E + L V D + N + L I I DINDN P L+ P + EN NG + + D D+ LN +V++ L + D F +N G I ++P+DRE SE L ++ D GSP L+ + ++V D NDN+P+ F + S A +VRE + ++ +A+D D NA + F L+ ++ F ++ TG + T L +Y L +MA D+ + L I V N
Sbjct: 1838 IGHTISTLR-AHDPDTLGSVTFLLMDGHD---GKFLLEPSTGKLILNDTLDRET---KSKYELRIRVSDGVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLN---PQTGMLTLTARLDYEEV--QHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVD----SEFGIDS-NGTIRTRRNLDR-EHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFIS----ANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVL-TVNAYDADTPPLNSQVRYFLKEGDS-------DLFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPV------------FELQSYHA--TVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEH-----MHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVN 2590 HSP 3 Score: 179.874 bits (455), Expect = 3.945e-45 Identity = 203/809 (25.09%), Postives = 357/809 (44.13%), Query Frame = 1
Query: 184 EEVPVGKIIGHII-KDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQ----TWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL-----------------------------------------EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARR---YFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVIL----ERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGI--PVKSTLKSISISVIDVNEYPPALKVEPSYNVIPED-LPVNSSFAKVI-ATDKDP---DANLKLTLISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFH--LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQG-SPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG-------LYVLKMMASDNGRPPKHSK 2397
E G +G I+ +D+ L G N QL D + V + P++ L +++RLD E++ + IL + A N Q T I V+ ++D+NDN+P F+ S+ E +EN I A DID G N + Y++ + EL T LKL R Y++ + + FL K + +L S + + I I DVND P+F+ NE+ IME+ +N V V D DEG NG + + + + + + FS+ +G + + +L+ ++ + L ITARD G P S+E +L+ ++D N+++P K + EN V + TD D+G NG++ Y ++L + + T + + K L+ E +S ++++ D + P T + ++I+++D+N+ P P + E+ +P N + + A D D ++ ++ L + F I+ G++ L+KPLDRE + + L ++ D P T + + + + DINDN P + E S+H + ENL + + + +D D GLN K++F L+ + +F ++ + G I + +DRE TS L ++ D + + + + V+D NDN P + ++ +N ++ R+S E F+ +A D D ENA + + + + +D + F + TG + T EL Y + + A D G SK
Sbjct: 1933 ENAQRGYQVGQIVARDADL--GQN----AQLSYGVVSDWANDVFSLNPQTGMLTLTARLDYEEV---QHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEFGIDSNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEET---QLKLKYRSPRKYQQ-TRQEFLAHQK-----QQRLSSTVKVTILIKDVNDEVPVFISANETA-IMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDR-ELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQY---SASVAENASIGAMVLQVSATDVDEGANGRIR-------YSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAE-LTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGI-VRVEVQDINDNDP-VFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHM-------HRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKF-----DSTTYNVAVPE---RISKGE-FVFGARALDLDDGENAVVHYTI--SGRDQ---HYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSK 2687 HSP 4 Score: 177.563 bits (449), Expect = 1.854e-44 Identity = 201/737 (27.27%), Postives = 347/737 (47.08%), Query Frame = 1
Query: 310 IQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQ-IGYSQELPLATDID-IGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKS------NRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKD-LDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIP--DKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQII--ENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFT--SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT---LISDNDGFFEI--DVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLA-LNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGS--PSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPD-SPENANISFKLISA-FKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
+I+P+S ++ V+ LDREQ + ++ A+T I + I+ D NDN+P+FE++ + F E Q I ++ +ATD D GPNSV SY+L+ +F + P + ++ + V ++ N Y LT V A D G+ L S+ +NI+I D ++N P F + + +D Q + +V D D G N E++++ FSV +G I L K I +P ++ L + A D G P S E +++ V N P V N Q+I EN +T+ + TD D G NG + +S + ER +F+ T ++I++ LD +L+ +++I +D G S++ ++I + DVN+ PP + + IPE+ PV + + A DKD N + L S D F I G + D E R + L + + P+S S A L + + +N+ P+ L+P F + E + +G ++ +D DSG +G+V +LL+ + NDK F ++ + G I+ R +DRE + ++L ++ + GS + + E ++++ + D ND P + + S S AA + + + V+A D D +N S+ +I+ K + F +++ TG + T L Y L + A D G PP+ + AT++I++ N
Sbjct: 2959 FRIEPQSGNITVAGHLDREQQDEYILKVVASDGAWRAETPITITIQ--DQNDNAPEFEHSFYSFSFPELQQSIALVGQI-IATDRDKQGPNSVISYSLQQPSPMFSI---DPATGEVFSKKAVRFKHSQYVRSPENMYALT-VLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTN-----EMDYSLMTFNLSSIFSVGRHDGWITLVKP---IQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSV-----NSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGN-----ERQDFSVDERTGGIVIQQQLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKN---PDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSS--NDK----GFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND-------PPEFIKHYYTSTISEAAPVGTK---VTTVKAIDKDVRTQNNQFSYSIINGNLKQS-----FKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQ-TGSATVHIELEDVN 3645 HSP 5 Score: 174.481 bits (441), Expect = 1.752e-43 Identity = 204/751 (27.16%), Postives = 333/751 (44.34%), Query Frame = 1
Query: 274 FDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIK-------VFIEIIDINDNSPKFEY---TSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIK--KPLDRELMSSIN----------------------VSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDAN--LKLTLISDND-GFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTS-FHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESF-----IVNVQASDPDSPENANISFKLISAFKDNIPV-YLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRP 2382
+D+ D+++ +I S + + LDRE+ + IL S+ ++ V I IID+NDN+P F + + EN+ +G L D D G NS SY+L + + P + L L+ + E S + A DAG L SKL+L++ I DVND+ P+F + + E T++N + + D+D G+NGR+S+EI R+ F V +G +++R L+ + D + L ++ RD G SS ++ +VID N++AP T I EN T V + D D G N +++ LS+ + +FT T IK +P DRE + ++ + DNGIP + + V DVN+ P P + I E + V D D N + +L N+ G F +D G L L + LDRE + H L+V+ D + + +++ ++ I + D NDN P+ + +S + E + + + + SD D G+N +V F +I+ +D F ++ G+++ +P+D E + L I +D G+PSLS + V D+NDN PI FP S+A ++E IV V A DPDS N +S+ IS + +P F + TG + T E+ S + L ++A+D +P
Sbjct: 868 YDIIQGDRAQN-FRIDTRSGRITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTN--NPNQQFRIGPVTGVLYLQRPIRAEPGS--LIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERM----FGVFP-DGYLFVRAPLDR-EERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQ-FTNSTF--TFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSS-------QTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVF------SISAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPI--FP------------STAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYA-ISKQEPQLPQGRHFGINTETGVIHTLREIDRESIDTFRLTVVATDRAQP 1576 HSP 6 Score: 153.295 bits (386), Expect = 5.835e-37 Identity = 192/751 (25.57%), Postives = 330/751 (43.94%), Query Frame = 1
Query: 226 DSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESC-DLFVS-SRLDREQLCDKSNCILQMSA----FINAQ------TWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTP------PRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHG-AIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVI---LERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLY--ENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTS--EIILRILLT--DQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISA-FKDNIPVYLFTLELMTGNLGTNGELSEGLYVLKMMASDNGRP 2382
DS+ I SNG + + ++ +S + + C D F S S L+ QL K + F+ Q + +KV I I D+ND P F ++ EN I A D D G N Y ++ D P P +L + +D E +S+ +L + A D GE ++ L I I D NDN P+F S + E+ + V QV D+DEG NGR+ + I +N FS+ G + + K+LN + ++ L + A D P +L N++DIN++ P+ + P L +++ENT+ ++ V D + +N S YF+ + + +S+ + + KPLDRE S +++V D G P + + + V D+N+ P +++ + + E+LP + ATDKD +A L+ L+ ++ F ID G + LDRE + L ++ D+S R +S+ L I++SD+NDNIPK + T++++ E ++ + + D D G N ++H YTI+ + + F +N G + + + + S ++ I+++ DQG SLS + ++ + + E TF N+ F S ++ I V A+ P I + + D++ V + L G G + EL+ LY + + A+D P
Sbjct: 2072 DSEFGIDSNGTIRTRR-NLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVF-ISANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSS--YLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNH----DFSISEDTGVVRVAKNLNYERL-SRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYL---ARVMENTVPPNGGYVLTVNAYD-ADTPPLN---SQVRYFLKEGDSDLFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPK-FDSTTYNVAVPERISKGEFVFGARALDLDDGENA-----VVH-YTISGR-DQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTVIL---RPPELFPTFAYMANSHFAMSEDVRPGKM------ITKVSATSPKKGLVGKIRYAIAGGIMGDSLRVDPNSGLLSVGQDGLDYELTH-LYEIWIEAADGDTP 2788 HSP 7 Score: 138.272 bits (347), Expect = 2.144e-32 Identity = 184/713 (25.81%), Postives = 311/713 (43.62%), Query Frame = 1
Query: 433 KVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMY-TPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNG-------------------IPVK------------------STLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLI-----------SDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSF--HLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQG--SPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRE-----SFIVNVQASDPDSPE-NANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPP 2385
KV + ++D ND+ P+F T FV E+ QIG++ A D P+++ S T L+D + + P + KL+L +D E KS +Y L R++ D + ++ I ++D NDN P+F S I E+ Q V Q++ +D D G+N ++S+ + + A FS+ G + L L+ ++ + L + A+D+G LS+ + NV+D+N++AP I P + ++ EN T V + D D GNNG + E S T+ V E ++ T + ++ LDRE S+ +++ RD P K ST+K ++I + DVN+ P + + I E++ +N+ V A D D N + + SD F G L+++ LDRELR + L + D P T S L I I D NDN P + +P + + EN + + + Q+ +D D G NG++++ ++ +D F ++ED G + + ++ E S L + D +P+ E + + + D NDN P F S AR+ +++ V A D D+P N+ + + L D LF + +G++ L + Y L ++A D G PP
Sbjct: 1808 KVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHD----PDTLGSVTFL-LMDGHDGKFLLEPSTGKLILNDTLDRETKS-KYEL-RIRVSDGVQ---YTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGV----VSDWANDVFSLNPQTGMLTLTARLDYEEV-QHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAP--IFDP-MSYSSEVFENVPIATEVVTVSAKDIDSGNNGLI--EYSITAGDVDSEFGIDSNGTIR--TRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVK-VTILIKDVNDEVPVF-ISANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLL-IRILDENDNSP-VFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHD------FSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAE-LTINILDINDNRP------------TFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSD-----LFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPP 2470 HSP 8 Score: 133.65 bits (335), Expect = 5.361e-31 Identity = 174/709 (24.54%), Postives = 310/709 (43.72%), Query Frame = 1
Query: 304 GVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIK-VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLD-EGENGRVSFEINH-TPENRLARRYFSVKSINGDIYLRKSL-----NSIDIPDKFH-LAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGF-FEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLY--ENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNG 2376
G +I ES +++ RLDRE++ D + + + + T V + ++D NDN PKF F + EN++IG ++D+D+G N+ SY+ + E P+S + + G +D E++ ++ +V A D ++ + I+I D NDN P F S E Q V Q++ D D +G N +S+ + +P FS+ G+++ +K++ + P+ + L + A D+G PL SEC + N++D +N+ P L Q + ++ V DK + G + S + F + + + + KP+ + + + D G+P +S + I V N P V ++PE+ PV S+ V ATD D P+ L+ ++ N+ F +D G + + + LD +L + L + V D + ++ L I ++D+NDN P + +H Y EN + + Q +D DS N +IH + + F +N+ +GTI S D E L+I + S S+ + + V N+ P + P F+F +S ++A + R + VQA+D DS E+ + + L+ + D F ++ TG + L ++ VL +MA + G
Sbjct: 2855 GTFEIT-ESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRL-FSLNVTENAEIGSFVIRVTSSDLDLGANANASYSFSE--NPGEKFRIEPQSGNITVAGHLDREQQDE--YILKVVASDGA---WRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQQPSP-------MFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQ-----DAVRGQRIVRVHANDKQDLGTNEMDYSLMT-FNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQDFSVDERTGGIVIQQQLDYDLIQEYHLNITVQDLGYHPLSSVAM-LTIILTDVNDN-PPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNA-----IIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDS-SMESYANLYVHVLGVNEFYPQFLQPV-----FHFDVSETSA-VGTR---VGAVQATDKDSGEDGRVYYLLVGSSNDK----GFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYG 3520 HSP 9 Score: 123.635 bits (309), Expect = 7.082e-28 Identity = 146/569 (25.66%), Postives = 252/569 (44.29%), Query Frame = 1
Query: 433 KVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFE-INHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDK--FHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVIL-----ERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNG-IPVKSTLKS-ISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD---PDANLKLTLISDN-DGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLL-EPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDN 2091
+V I + N ++P+F S+ V EN +G + ATD D GPN + Y++ + + R+ +V++ ++DY+ + V+ D G L S L I + DVNDN P+F I E+ + V+Q D D +N + + + P+ R +F + NG I S S D ++ + L I A++ + + S L +V+ +N P + +P + E + T V + TD D G +G+V Y++++ + + ++T + + + LDRE + + ++++ ++ G I T ++ + IS+ D N+ PP + I E PV + V A DKD + ++I+ N F+IDV G + LDRE + LV+ D P +T S ++I + D+NDN P E + ++ EN ++I L SDPD NG Y + K V+ + G + S DRE+T + I + D G P + + + V D+NDN
Sbjct: 3214 RVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQDFS-VDERTGGIVIQQQLDYDLIQEYHLNITVQ--DLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPD----RHFFIMNQSNGTI---SSAVSFDYEERRIYTLQIKAKNPDS-SMESYANLYVHVLGVNEFYPQFL-QPVF--HFDVSETSAVGTRVGAVQATDKDSGEDGRV--------YYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND-PPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLP-PQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGP-----FTYQLIGGKHKSWLSVDRNSGVVRSTTSFDREMTPILEAIIEVEDSGKPKQKSQHLLTITVLDQNDN 3753 HSP 10 Score: 110.153 bits (274), Expect = 1.014e-23 Identity = 163/729 (22.36%), Postives = 285/729 (39.09%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKS-NCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLAT----DIDIGPNSVHSYTL---EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAG---EDQLCSKLNLNISINDVNDNRPIFLKCNESV---RIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPEN--RLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAP---------------SIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELM-SSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT--SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQF-NFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISA 2256
V E P G + + + G+N +F +++ ++ + I + L++ LD E + + N + T + + ++D NDN P F T+ V + E G + P+ T D D G N SY + EP L + + + V+ + +++S F V A D E QL ++ + + + D+NDN P+F+ N ++ + + V QV KD D NG V++EI P+ +L R + G + ++ ++ L + + D ++ +I + S+ +G + + + + G+ G+V+ F I + S+ + LDRE V + G +++ + ++V+D N+ PP P + EDL + + + + A D D ++ L+ +DG F ++ G L L LDRE + + L + V+D + T I +SD NDN P L E T SF + EN +GQ+ D D G N ++ + ++ + D F +N G + +D E IL + D G PSLS + V D NDN PI+ S + F N I++ +V V A D DS N I + + +
Sbjct: 1393 VLETSPTGTELMRF----RASDADQGVNSQVVFSISAGNR-RDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKE----GIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLP--QGRHFGINTETGVIHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFKQEV--------RYQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTAHLASAEIEYFVTNVTATGSRGQVD------RLFDIDAKLGILSTAAE------LDREAGPEEYEVEVYAIALGGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHDGKFLLEPSTGKLILNDTLDRETKSKYELRIRVSD----GVQYTEAYATIQVSDTNDN-PPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWA------NDVFSLNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATE----------VVTVSAKDIDSGNNGLIEYSITAG 2069 HSP 11 Score: 100.138 bits (248), Expect = 1.161e-20 Identity = 177/783 (22.61%), Postives = 312/783 (39.85%), Query Frame = 1
Query: 313 QIKPESCDLFVSSRL--DREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVV---EFYENSQIGYSQELPLATDIDIGPNSVHSYTL-EPLLDLFELM-------YTPPRSLKLVLRGK---------VDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISIN-DVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILE----RWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT--LISD--NDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSF--HLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRI------------------------------------LLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNI----PVYLFTLELMTGNLGTNGELSEGL---YVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
+I ES D F + + DR Q ++ ++ + + V +E DINDN+P F + + +F + + A D D N + +Y + +LF+L +TP K +R + V E++S+ ++T + G + + ++ V +N PI + ++ V V G G+V R F + + G + L+ P+++ + + A G P +S K+ V+D N+ P + P + N + ++ IG T ++ + D D G V F++++ ++ ST KLI+ LDRE S + I D V+ T +I V D N+ PP + IPE+ +++A D D N +L+ ++SD ND F G L L LD E + L+V DN P S +T++ + + D+NDN P + +P S+ ++EN+ + + + D DSG NG ++ Y+I + +F ++ + GTI + R +DRE S L + L Q LS K+ + + D ND P++ ++ N +I+ + ++ V+A D D N I + + A +++ P+ F+L G L L L Y+L + A D G PP+ S ++ L I++ N
Sbjct: 1555 EIDRESIDTFRLTVVATDRAQPSERQ---------LSTEKLVTVIVE--DINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFKQEVRYQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTAHLASAEIEYFVTNVTAT----GSRGQVD-------------RLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQ--IGHT-ISTLRAHDPD--TLGSVT--------FLLMDGHDGKFLLEPSTGKLILNDTLDRETKSKYELRIRVSDG---VQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQP-SLSTTITVYCNVLDLNDNAP-IFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIE------YSITAGDVDSEFGIDSN-GTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANETAIMENVAIN----------TVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPL-PFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQ-STESQLLIRILDEN 2272 HSP 12 Score: 98.5969 bits (244), Expect = 2.939e-20 Identity = 156/625 (24.96%), Postives = 268/625 (42.88%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATD-IDIGPNSVHSYTLEPLLDLFEL--MYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTS---YFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLK---LTLISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTD-NSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLY-----ENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENAN-ISFKLISA 2256
V I I+D ++N PKFE ++ +++ G A D D+G N + Y+L F L +++ R + K + RY L V+A D G + + I + N + P F + V + E+ + T+ V D D G NG + + I+ E R+ FSV G I +++ L+ D+ ++HL IT +D G PLSS L + D+N++ P K C I EN T V D D N ++ + +F I+ + ++ T + + + ++ + D+ + + ++ + V+ VNE+ P ++P ++ + E V + V ATDKD + + L + S ND F ID G + + + LDRE + L V+ + S + T + I+I D ND P+ ++ H Y E + + +K D D +F +Y+I + +K F ++ G I + +DRE TS L I D G P + + +++ D NDN P +T P N + + + + I+ + ASDPD P N +++LI
Sbjct: 3110 VNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEM-DYSLM----TFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELV-VRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNE----RQDFSVDERTGGIVIQQQLD-YDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEY---HCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQ---SNGTISSAVSFDYEERRIYTLQIKAKNPDSSM---ESYANLYVHVLGVNEFYPQF-LQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGNDP-PEFIK----HYYTSTISEAAPVGTKVTTVKAIDKDVRTQNN-QF----SYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFT-PEGLNGYISENEPAGTS--------IMTLIASDPDLPRNGGPFTYQLIGG 3694 HSP 13 Score: 87.8113 bits (216), Expect = 5.321e-17 Identity = 127/557 (22.80%), Postives = 229/557 (41.11%), Query Frame = 1
Query: 622 LMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD---PDANLKLTLISDNDGFFEID-----VFGNLKLMKPLDRELRP---FHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFH-LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRE---SFIVNVQASDPDSPENANISFKL 2247
L P L V + +DYE + ++A D L S + +++ D NDN P+ + + ++E+ Q + V D D G+NG V + + +N + +S G+IY R L+ +I D + + A D G ++ ++ +++D N++ P +L + EN + V + +D D G N + S E++ + + + LDRE + +V D ++ I+I++ D N+ P + PE + ++IATD+D P++ + +L + F ID VF + + +R + L VL TDN P + L +NI I D ++N PK + L ++ I ++ +D ++ + L+ T N + F V DG I ++PI + L + TD+G P S E ++V+ V EN + P FS++S + E S I+ V A+D D+ N + + +
Sbjct: 2752 LRVDPNSGLLSVGQDGLDYEL--THLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRL----QNDFDGTFEITES--GEIYTRMRLDREEIGD-YAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRLFSL----NVTENAEIGSFVIRVTSSDLDLGANANASYSFSENPG----EKFRIEPQSGNITVAGHLDREQQDEYILKVVASDGAWRAET---PITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQQPSP-MFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECL-VNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLM---TFN---LSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTP------------RFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSI 3268
BLAST of Protocadherin 11 vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0078045) HSP 1 Score: 213.772 bits (543), Expect = 1.202e-55 Identity = 208/755 (27.55%), Postives = 339/755 (44.90%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFIN---AQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL--EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--------NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIP--EDLPVNSSFAKVIATDKDPDANLKLTLI------SDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLK-VSDPDSGLNGKVKFL---LIHAYTIN---DKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLK--VADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAF-----KDNIPVYLFTLELMTGNLGTNGEL 2331
V E++P G ++G +I A G + + S D G I+ S ++ ++ LD E KS +L + A + +V IE+ D+NDN+P+FE + + E++++G A D D G + +Y+L E LF + RS L+L +DYE S R+ L V A D G L + L + + + DVNDN P+F K SV + E +N + QV DLD G N R+++ I ++ + ++F + +G IYLR L+ + D++ L + A D+G ++ ++I V+D N++ P + +I EN + V ++ +D D G N + L I ++ T ++ ++PLDREL ++ + RD G PV+S + I V DVN+ P + +P +V+ E+ P + +V A D+D N +T SD G F ID G ++ LD E R + L V +D P R T L + + D+NDN P + F + E+ +G + + P + V+ L YT+N LI+ F ++ G + R +DREV SE L I D + + I +K VAD NDN P W P D + +S + ++ I N A+D D+ N ++ ++LI F + LF ++ +TG L L
Sbjct: 836 VKEDIPRGTVVGSVIA----ASGDVAHRSPVRYSIYSGD-PDGYFSIETNSGNIRIAKPLDHEA---KSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAI---DARSGHLILSQHLDYES-SQRHTLI-VTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDR-ETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKY---EFRIEENLRRGSVVGVVTASDLDLGENAAIRYSL-----LPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEI-ADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNP-PRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEW--PQDP---IDLQVSEATPVGTI----IHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPL 1557 HSP 2 Score: 204.142 bits (518), Expect = 9.857e-53 Identity = 211/773 (27.30%), Postives = 351/773 (45.41%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP--LLDLFELMYTPPRS----LKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI-IVKPTLGNKCQIIENTIGMTTVALIMVTDGD-KGNNGKVNCELSNT-SYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLI-----SDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFH---LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIK-DKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSS-AARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNL-----GTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKV 2421
VFE V V IG+I G++ + + + + + I + ++ +LDRE S + +S I+V + + D NDN+P F TS +EF EN+ + L A D+D+ P + Y + + D F L R L L + G +D E L ++A D G L + +NI+I DVNDN+PIF + + E+ + +V QV D D ENG V + IN ++ + F + G IY+ K+L+ + + L + A+DHG PL + + V D+N++ P+I ++ + +I E+ VA I V D D K VN L+ +F + R +S + +I+ PLDRE++S+ +S+V D G P KSI + + DVN+ PP + + + + E +S +V+A D+D N LT + +F+ID G + +D E P L V+ D P +T+ L +TI D+NDN P + SF+ + EN I ++ SDPD G+N V YTI + +F V G I +D E S +L TD+G LS I +++ D NDN P++ +P ++ S+ S A + IV V A+DPD +S+++++ + I F ++ TG + ++ +++L + A+D G + + DA +++ +
Sbjct: 86 VFEGVAVDYQIGYIGD-------FGGIDSGPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRETRASYSLVAIPLSG-----RNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLL--IEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDK--EQMFRIDPRTGAIYINKALD-FETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTR---DNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVL-VTIHDVNDNEPIFDQ--SFYNVSVAENEPVGRCILKVSASDPDCGVNAMVN------YTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRG--GLSTTAMIKMQLTDVNDNRPVF-YP----REYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGI----FRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGN-LRSNADAVVFLSI 817 HSP 3 Score: 169.088 bits (427), Expect = 7.863e-42 Identity = 179/695 (25.76%), Postives = 318/695 (45.76%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYT-PPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIEN-----TIGMTTVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKP----LDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYN-VIPEDLPVNSSFAKVIATDKD--PDANLKLTLIS-DNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL-LEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMT--GNLGTNGEL---------SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
+F+ I D+NDN P+FE + E + G S LA D D G NS +Y+L + + P++ + R +D E + V A D G L S + ++I+DVNDN PIF + +V + E+ + + + +V D D G N V++ I E F V+S +G+I + L+ + + + A D G LS+ + + D+N++ P + K + E+ T + ++ TD D GN G+V+ + N + ++R ST ++ + +P + + M +N+S D G + + +S+ID + PP + + YN + ED+P + VIA D + ++ ++ S D DG+F I+ GN+++ KPLD E + L + T PP T +NI + D+NDN P+ + E+ + + D DSG +G+V + L+ K F ++ G + + +D E + L + TD G PSLS I++ V D NDN P++ E ++++ ++S S + + I+ V ASD D+ NA I+++++ A DN+ + + ++ G +G + + Y L ++A+DNG P H+K + ++V +N
Sbjct: 490 IFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLT--VVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIG---EGFKHLTEFEVRSASGEICIAGELD-FERRSSYEFPVLATDRGG--LSTTAMIKMQLTDVNDNRPVFYPREY---KVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDR-----STGEIFVVRPDMLSVRTQPMHMLNIS--ATDGGNLRSNADAVVFLSIIDAMQRPPIFE-KARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ--VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESG------KGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVF-----EKDEYSVNVSESRS----INAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVI-VRVLDAN 1147 HSP 4 Score: 142.124 bits (357), Expect = 1.679e-33 Identity = 196/766 (25.59%), Postives = 328/766 (42.82%), Query Frame = 1
Query: 301 KGVIQIKPESCDLFVSSRLDREQLCDKSNCI--LQMSAFINAQT-WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL-----------EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGE---DQLCSKLNLNISINDVNDNRPIFLKCNES------VRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSL----NSIDIPDKFHLAITARDHGAI-PLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL----SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKS-------------------------ISISVIDVNEYPPALKVEPSYNVIPEDLPVNSS---FAKVIATDKD--PDANLKLTLISDNDG-FFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL-LEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSL-SHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHS 2394
+ I S +L V+ LDRE + I L +A N Q+ I V IE+ D+NDN+P++ ++ E + +G ATD D G N Y L E + LF + + L L+ +D+E + + +L V+A D ++L + + + + I D ND+ P F+ N S + I + T++ + V ++ D D G+NG++++EI T N R F + S G I L KSL ++ +F+L I A+DHG P S L V +N+ P + + I+EN + V + N ++ E+ +N + V +R T+ + DRE +S + + RD +STL S I I+V DVN+ P + Y + +P NS V+A+D D P+A+L ++ N G F ID +PLDRE + L + +D P SR + I + D NDN P+ L + + E+ +++ Q+ D D G+N ++ + L + + +F ++ G I ++ +DRE+ + +L TD G + S + + V D NDN PI+ ++ + I A + ++ + VQA D D NA I + L + +++ F + TG L + L S L L+++A D G PP+ S
Sbjct: 1423 EAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSL---TGALSLQAPLDFE--AVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEI--TGGNGEGR--FRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVY---RATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITT-------RGQFDRESQASYVLPVYVRDAN--RQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGL---SVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANE-------TQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIF-------ERYPY-IGQVPALIQPGQTLL-KVQALDADLGANAEIVYSLNA--ENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSS 2146 HSP 5 Score: 129.028 bits (323), Expect = 1.687e-29 Identity = 177/734 (24.11%), Postives = 318/734 (43.32%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTS-FVVEFYENSQIGYSQELPLATDIDIGPNS--VHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQ-LCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSID--IPDKFHLAITARDHGAIPL-SSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVE-PSYNV-IPEDLPVNSSFAKVIATDKDPD-ANLKLTLISDN-DGFFEIDVF-GNLKLMKP--LD------------------------------------RELRPFHPLVVLVTDNSPPNSRTTSLA-------------LNITISDINDNIPKLLEPTSFH-LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIP-VYLFTLELMTGNLGTNGELSEGL---YVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
++I + D+NDNSP+F S + + ENS+ G + +A+D+D GPN+ ++S T L + F + + S +L R +D E+ S RY L +++A D G+ + N+ I + D NDN P F + + ED L +V Q+ D D G N R+ + + + + + A I+G L ++ +D + ++ + A D G + S+ + NV+DIN++ P P +G +I+ T+ + D D G N ++ L N + ++ ST L + L E +++ +V RD G P +S+L I + + + + P L+ + +Y V + E+ P + +V+A D ++ + + N DG +D G +++ KP LD R R +T++ P R +A L I + D NDN PK + + E N + + Q+ D D+G N ++++ ++ N +I+ F G + + +DRE+ L+I+ TD+G P ++ I +++ D NDN+P TFP + N S A L + I ++ A+D D+ ++++L + +I + +F L+ +G L L L Y L ++ASD H L ++V N
Sbjct: 1833 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTV-VASDLDEGPNADLIYSITGGNLGNKFSIDSS---SGELSAR-PLDREQHS-RYTL-QIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFA--------IDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPG---QTLLKVQALDADLGANAEIVYSL-NAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAF-----SGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQP--TFPPN-----NLVTVSEATELG---AVITSISANDVDT--YPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAA----HEARTVLTVRVNDEN 2526 HSP 6 Score: 114.775 bits (286), Expect = 3.021e-25 Identity = 196/824 (23.79%), Postives = 327/824 (39.68%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDRE--QLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKF-EYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDL--FELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTV---------YQVLVKDLDEG-ENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAI--PLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVIL-ERWEFTSSTFK-------LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKS---ISISVIDVNEYPPALKVEPSYN-------VIPEDLPVNSSFAKVIATDKDPDANLKLTL---ISDNDGFFEIDV-FGNLKLMKPL-----DRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTD---QGSPSLSHEEK--------------------IVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRE----SFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTN--GELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
E + G ++G ++ S L +G N + L + S Q+ P + ++ LDRE +L D + + + V I + D+NDN+P+ + VV E G A D D G N+ +Y++ D L P S + R +D+E++S + V A D G + L + + D+NDNRP F + R+ ED L V V+ ++E E+ RV++ +N ++ L F + +G++ + + L+ ++ +F L I A D A P SS + V D+N++AP P Q+ E T T + TD D G NG + L YF L E E S F+ L ++ PLD E + + + D V L++ + + ++D N++ P V P+ + I + + A ++A D+D N +LT + +G F I+ G ++L+K L D E L++ D+ P + +SL L++ + ++N P+ L+ + EN+ S + Q+ N + +Y I + D F V+ G I + DRE + +L + + D Q + S S K I + V D NDN P + S LSV E I V ASD D NA++ + + N F+++ +G L Y L++ ASD G+P + I V N
Sbjct: 1164 ENLRRGSVVG-VVTASDLDLGENAAIRYSLLPINSS------FQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRS-ARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERS--IYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKD-LIEAAFDIDRHSGNLVVARLLDR-EVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPI---DLQVSEATPVGTIIHNFTATDADTGTNGDLQYRL--IRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHF-VSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANL------SYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFR-------------PGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGN----KFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQN 1946 HSP 7 Score: 82.8037 bits (203), Expect = 1.648e-15 Identity = 178/740 (24.05%), Postives = 300/740 (40.54%), Query Frame = 1
Query: 424 TWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDE--GENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVK---------PTLGNKCQIIENTIGMTTVALIMVTDGD-KGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSIN------VSIVCRDNGIPVKSTLKSISISVIDVNEYPPALK--VEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDN-DGFFEIDVFGNLKLMKPLDRELRPFHPL-VVLVTDNSPPNSRTTSLALN----ITISDINDNIPKLLEPTSF--HLYENLNGNSTIGQLKVSDPD--SGLNGKVKFLLI-----HAYTINDKLIKDKFFVNE----DDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQF---NFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL----SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFF---FGGETDRLSLTLIVAL 2493
++ ++ IE+ D NDNSPKF FV E + G A D D G N+ Y + + P + ++R + +++ + ++ A D G Q+ + + I DVNDN+P F N V + E T+L + + D+D R+ E EN F++ +G + L++ L+ ++ ++ L + A D + L V D N++AP + + P + + + + TV TD D +GNN KV Y + + F+ ++ + R L +++ V I+ +D G P LKS ++ + N+ ++ Y I E P+ S V+ +D + L +I+ N + FE+ + L+KPLDRE + L +VL + PP + + + ITI D NDN P + + E +I QL+ D D + N +V + + H +TI+ L+ FVN D G + E+I+R + P L + L++ DENDNEP FP E F N + SS R ASD D +++ + A D +F ++ +G L T+ + Y ++++ASD G K A++ ++V + F F T R L VAL
Sbjct: 2304 SYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEP--AFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF-PPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIEN---MSIFALDRYSGKLVLKRRLD-YELQQEYELDVIASDAAH---EARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTV---NATDADSEGNNSKV-------IYIIEPAQEGFSVHPSNGVVSVNMSR-LQPAVSSSGDYFVRIIAKDAGKPA---LKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSV---VLQLGQDA-LDQSLAIIAGNEESAFELLQSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTID--LVTGVLFVNNRLDYDSGA----------KSYELIIRACDSHHQRP-LCSLQPFRLELHDENDNEP--KFPLTEYVHFLAENEPVGSSVFR----------AHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESG-LVTSAFVFDYEQRQRYDMELLASDMG-----GKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVAL 2984 HSP 8 Score: 67.781 bits (164), Expect = 6.250e-11 Identity = 132/573 (23.04%), Postives = 222/573 (38.74%), Query Frame = 1
Query: 742 LCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI---NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVN--------EYPPA-LKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPF--HPLVVLVTDN----SPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTI----GQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFS---------IRPIDREVTSEIILRILLTDQGSP------SLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPE--NANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL 2331
L S L I + D NDN P F + + E V QV D D G N R+ + I NH + + + N I L + +I D + L I A D G ++ + ++D+N++ P+ +V + + + +I V G V+ E N S F L+R+ + KL++K+ LD EL + ++ D ++ L ++ V D N + PPA + P+ + I E L V+ V ATD D + N N K++ ++ F HP +V+ N P S + + I D P L T + N NG+ Q + ++ G V L D L + + ++ + F ++P+DRE LR++L+ P + S +++ + D NDN PI+ D + ++ IS A +R S I +QA D D N+ + + + S + ++FT++L+TG L N L
Sbjct: 2302 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTN--IVLDR-----EIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIE--NMSIFA-LDRY-----SGKLVLKRRLDYELQQEYELDVIASDAAHEARTVL---TVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGN-------------------NSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGK--PALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQ-----DALDQSLAIIAGNEESAFELLQSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIF----DRSAKYEAEISELAP---LRYS-IAQLQAIDADQENTPNSEVVYDITSGNDE----HMFTIDLVTGVLFVNNRL 2818 HSP 9 Score: 65.0846 bits (157), Expect = 4.419e-10 Identity = 101/423 (23.88%), Postives = 181/423 (42.79%), Query Frame = 1
Query: 178 VFEEVPVGKII---GHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMS--------AFINAQTWIKVFIEIIDINDNSPKFEYTS-FVVEFYENSQIGYS--QELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLK-LVLRGKVDYEKKSNRYFLTRVKACDAGEDQ-LCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKP---TLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRD 1389
+ E P+G ++ G D LAI + N+ F++ QSK ++ +KP LDRE+ D L +S + +N+ + I V I I+D NDN P F+ ++ + E E + + YS Q + D + PNS Y + D E M+T L + ++DY+ + Y L ++ACD+ + LCS + ++D NDN P F + E+ + +V++ DLD+G G++++ I P + + + F V S +G + + + ++ + + A D G S ++ D P + L + + + V + TD D G +G+V +LS + R S+ ++IK+ L + N+ + RD
Sbjct: 2657 ISEAAPLGSVVLQLGQDALDQSLAIIAG--NEESAFELL---QSKAIVLVKP----------LDRER-NDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGND--EHMFTIDLVTGVLFVNNRLDYDSGAKSYELI-IRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESG-LVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRD--EFTPQFTERTYRFVLPAAVALPQGYV----VGQVTATDSDSGPDGRVVYQLSAPHSHFKVNR-----SSGAVLIKRKLKLDGDGDGNLYMDGRD 3048 HSP 10 Score: 51.6026 bits (122), Expect = 6.462e-6 Identity = 130/597 (21.78%), Postives = 230/597 (38.53%), Query Frame = 1
Query: 328 SCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKF------EYTSF---VVEFYENSQIGYSQELPLATDIDI-GPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDE-----GENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHG-----AIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGN--NGKVNCELSN------------TSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATD--KDPDANLKLTL---ISDNDGF--FEIDVFGNLKLMK-PLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYEN---LNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPI 1977
S L + RLD E + ++ A A+T + V + D NDN+P F Y + + E E+ + + ATD D G NS Y +EP + F + P + V ++ S+ + R+ A DAG+ L S L + ND R FL+ +I E L V Q+ LD+ N +FE+ + L + + D+Y K L ++ HG ++ SS +I ++D N++ P I + + +I E ++A + D D+ N N +V ++++ T + R ++ S +++LII+ C + +L+ + + D N+ P + + + E+ PV SS + A+D K P L ++ SD + F +D L D E R + + +L +D + S+A+ + I ++ P+ E T + L +GQ+ +D DSG +G+V + L ++ F VN G + R +
Sbjct: 2484 SGKLVLKRRLDYELQQEYELDVIASDAAHEARTVLTVRVN--DENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVH--PSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAIIAGNEESAFELLQSKAIVLVK---PLDRERNDLY------------KLRLVLS-HPHGPPLISSLNSSSGISVIITILDANDNFP--IFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIR---------------ACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDM---GGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHS--------HFKVNRSSGAVLIKRKL 3032
BLAST of Protocadherin 11 vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0343249) HSP 1 Score: 213.772 bits (543), Expect = 1.202e-55 Identity = 208/755 (27.55%), Postives = 339/755 (44.90%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFIN---AQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL--EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--------NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIP--EDLPVNSSFAKVIATDKDPDANLKLTLI------SDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLK-VSDPDSGLNGKVKFL---LIHAYTIN---DKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLK--VADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAF-----KDNIPVYLFTLELMTGNLGTNGEL 2331
V E++P G ++G +I A G + + S D G I+ S ++ ++ LD E KS +L + A + +V IE+ D+NDN+P+FE + + E++++G A D D G + +Y+L E LF + RS L+L +DYE S R+ L V A D G L + L + + + DVNDN P+F K SV + E +N + QV DLD G N R+++ I ++ + ++F + +G IYLR L+ + D++ L + A D+G ++ ++I V+D N++ P + +I EN + V ++ +D D G N + L I ++ T ++ ++PLDREL ++ + RD G PV+S + I V DVN+ P + +P +V+ E+ P + +V A D+D N +T SD G F ID G ++ LD E R + L V +D P R T L + + D+NDN P + F + E+ +G + + P + V+ L YT+N LI+ F ++ G + R +DREV SE L I D + + I +K VAD NDN P W P D + +S + ++ I N A+D D+ N ++ ++LI F + LF ++ +TG L L
Sbjct: 836 VKEDIPRGTVVGSVIA----ASGDVAHRSPVRYSIYSGD-PDGYFSIETNSGNIRIAKPLDHEA---KSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAI---DARSGHLILSQHLDYES-SQRHTLI-VTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDR-ETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKY---EFRIEENLRRGSVVGVVTASDLDLGENAAIRYSL-----LPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEI-ADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNP-PRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEW--PQDP---IDLQVSEATPVGTI----IHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPL 1557 HSP 2 Score: 204.142 bits (518), Expect = 9.857e-53 Identity = 211/773 (27.30%), Postives = 351/773 (45.41%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP--LLDLFELMYTPPRS----LKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI-IVKPTLGNKCQIIENTIGMTTVALIMVTDGD-KGNNGKVNCELSNT-SYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLI-----SDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFH---LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIK-DKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSS-AARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNL-----GTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKV 2421
VFE V V IG+I G++ + + + + + I + ++ +LDRE S + +S I+V + + D NDN+P F TS +EF EN+ + L A D+D+ P + Y + + D F L R L L + G +D E L ++A D G L + +NI+I DVNDN+PIF + + E+ + +V QV D D ENG V + IN ++ + F + G IY+ K+L+ + + L + A+DHG PL + + V D+N++ P+I ++ + +I E+ VA I V D D K VN L+ +F + R +S + +I+ PLDRE++S+ +S+V D G P KSI + + DVN+ PP + + + + E +S +V+A D+D N LT + +F+ID G + +D E P L V+ D P +T+ L +TI D+NDN P + SF+ + EN I ++ SDPD G+N V YTI + +F V G I +D E S +L TD+G LS I +++ D NDN P++ +P ++ S+ S A + IV V A+DPD +S+++++ + I F ++ TG + ++ +++L + A+D G + + DA +++ +
Sbjct: 86 VFEGVAVDYQIGYIGD-------FGGIDSGPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRETRASYSLVAIPLSG-----RNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLL--IEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDK--EQMFRIDPRTGAIYINKALD-FETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTR---DNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVL-VTIHDVNDNEPIFDQ--SFYNVSVAENEPVGRCILKVSASDPDCGVNAMVN------YTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRG--GLSTTAMIKMQLTDVNDNRPVF-YP----REYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGI----FRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGN-LRSNADAVVFLSI 817 HSP 3 Score: 169.088 bits (427), Expect = 7.863e-42 Identity = 179/695 (25.76%), Postives = 318/695 (45.76%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYT-PPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIEN-----TIGMTTVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKP----LDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYN-VIPEDLPVNSSFAKVIATDKD--PDANLKLTLIS-DNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL-LEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMT--GNLGTNGEL---------SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
+F+ I D+NDN P+FE + E + G S LA D D G NS +Y+L + + P++ + R +D E + V A D G L S + ++I+DVNDN PIF + +V + E+ + + + +V D D G N V++ I E F V+S +G+I + L+ + + + A D G LS+ + + D+N++ P + K + E+ T + ++ TD D GN G+V+ + N + ++R ST ++ + +P + + M +N+S D G + + +S+ID + PP + + YN + ED+P + VIA D + ++ ++ S D DG+F I+ GN+++ KPLD E + L + T PP T +NI + D+NDN P+ + E+ + + D DSG +G+V + L+ K F ++ G + + +D E + L + TD G PSLS I++ V D NDN P++ E ++++ ++S S + + I+ V ASD D+ NA I+++++ A DN+ + + ++ G +G + + Y L ++A+DNG P H+K + ++V +N
Sbjct: 490 IFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLT--VVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIG---EGFKHLTEFEVRSASGEICIAGELD-FERRSSYEFPVLATDRGG--LSTTAMIKMQLTDVNDNRPVFYPREY---KVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDR-----STGEIFVVRPDMLSVRTQPMHMLNIS--ATDGGNLRSNADAVVFLSIIDAMQRPPIFE-KARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ--VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESG------KGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVF-----EKDEYSVNVSESRS----INAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVI-VRVLDAN 1147 HSP 4 Score: 142.124 bits (357), Expect = 1.679e-33 Identity = 196/766 (25.59%), Postives = 328/766 (42.82%), Query Frame = 1
Query: 301 KGVIQIKPESCDLFVSSRLDREQLCDKSNCI--LQMSAFINAQT-WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL-----------EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGE---DQLCSKLNLNISINDVNDNRPIFLKCNES------VRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSL----NSIDIPDKFHLAITARDHGAI-PLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL----SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKS-------------------------ISISVIDVNEYPPALKVEPSYNVIPEDLPVNSS---FAKVIATDKD--PDANLKLTLISDNDG-FFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL-LEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSL-SHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHS 2394
+ I S +L V+ LDRE + I L +A N Q+ I V IE+ D+NDN+P++ ++ E + +G ATD D G N Y L E + LF + + L L+ +D+E + + +L V+A D ++L + + + + I D ND+ P F+ N S + I + T++ + V ++ D D G+NG++++EI T N R F + S G I L KSL ++ +F+L I A+DHG P S L V +N+ P + + I+EN + V + N ++ E+ +N + V +R T+ + DRE +S + + RD +STL S I I+V DVN+ P + Y + +P NS V+A+D D P+A+L ++ N G F ID +PLDRE + L + +D P SR + I + D NDN P+ L + + E+ +++ Q+ D D G+N ++ + L + + +F ++ G I ++ +DRE+ + +L TD G + S + + V D NDN PI+ ++ + I A + ++ + VQA D D NA I + L + +++ F + TG L + L S L L+++A D G PP+ S
Sbjct: 1423 EAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSL---TGALSLQAPLDFE--AVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEI--TGGNGEGR--FRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVY---RATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITT-------RGQFDRESQASYVLPVYVRDAN--RQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGL---SVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANE-------TQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIF-------ERYPY-IGQVPALIQPGQTLL-KVQALDADLGANAEIVYSLNA--ENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSS 2146 HSP 5 Score: 129.028 bits (323), Expect = 1.687e-29 Identity = 177/734 (24.11%), Postives = 318/734 (43.32%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTS-FVVEFYENSQIGYSQELPLATDIDIGPNS--VHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQ-LCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSID--IPDKFHLAITARDHGAIPL-SSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVE-PSYNV-IPEDLPVNSSFAKVIATDKDPD-ANLKLTLISDN-DGFFEIDVF-GNLKLMKP--LD------------------------------------RELRPFHPLVVLVTDNSPPNSRTTSLA-------------LNITISDINDNIPKLLEPTSFH-LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIP-VYLFTLELMTGNLGTNGELSEGL---YVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
++I + D+NDNSP+F S + + ENS+ G + +A+D+D GPN+ ++S T L + F + + S +L R +D E+ S RY L +++A D G+ + N+ I + D NDN P F + + ED L +V Q+ D D G N R+ + + + + + A I+G L ++ +D + ++ + A D G + S+ + NV+DIN++ P P +G +I+ T+ + D D G N ++ L N + ++ ST L + L E +++ +V RD G P +S+L I + + + + P L+ + +Y V + E+ P + +V+A D ++ + + N DG +D G +++ KP LD R R +T++ P R +A L I + D NDN PK + + E N + + Q+ D D+G N ++++ ++ N +I+ F G + + +DRE+ L+I+ TD+G P ++ I +++ D NDN+P TFP + N S A L + I ++ A+D D+ ++++L + +I + +F L+ +G L L L Y L ++ASD H L ++V N
Sbjct: 1833 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTV-VASDLDEGPNADLIYSITGGNLGNKFSIDSS---SGELSAR-PLDREQHS-RYTL-QIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFA--------IDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPG---QTLLKVQALDADLGANAEIVYSL-NAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAF-----SGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQP--TFPPN-----NLVTVSEATELG---AVITSISANDVDT--YPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAA----HEARTVLTVRVNDEN 2526 HSP 6 Score: 114.775 bits (286), Expect = 3.021e-25 Identity = 196/824 (23.79%), Postives = 327/824 (39.68%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDRE--QLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKF-EYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDL--FELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTV---------YQVLVKDLDEG-ENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAI--PLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVIL-ERWEFTSSTFK-------LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKS---ISISVIDVNEYPPALKVEPSYN-------VIPEDLPVNSSFAKVIATDKDPDANLKLTL---ISDNDGFFEIDV-FGNLKLMKPL-----DRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTD---QGSPSLSHEEK--------------------IVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRE----SFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTN--GELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
E + G ++G ++ S L +G N + L + S Q+ P + ++ LDRE +L D + + + V I + D+NDN+P+ + VV E G A D D G N+ +Y++ D L P S + R +D+E++S + V A D G + L + + D+NDNRP F + R+ ED L V V+ ++E E+ RV++ +N ++ L F + +G++ + + L+ ++ +F L I A D A P SS + V D+N++AP P Q+ E T T + TD D G NG + L YF L E E S F+ L ++ PLD E + + + D V L++ + + ++D N++ P V P+ + I + + A ++A D+D N +LT + +G F I+ G ++L+K L D E L++ D+ P + +SL L++ + ++N P+ L+ + EN+ S + Q+ N + +Y I + D F V+ G I + DRE + +L + + D Q + S S K I + V D NDN P + S LSV E I V ASD D NA++ + + N F+++ +G L Y L++ ASD G+P + I V N
Sbjct: 1164 ENLRRGSVVG-VVTASDLDLGENAAIRYSLLPINSS------FQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRS-ARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERS--IYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKD-LIEAAFDIDRHSGNLVVARLLDR-EVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPI---DLQVSEATPVGTIIHNFTATDADTGTNGDLQYRL--IRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHF-VSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANL------SYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFR-------------PGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGN----KFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQN 1946 HSP 7 Score: 82.8037 bits (203), Expect = 1.648e-15 Identity = 178/740 (24.05%), Postives = 300/740 (40.54%), Query Frame = 1
Query: 424 TWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDE--GENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVK---------PTLGNKCQIIENTIGMTTVALIMVTDGD-KGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSIN------VSIVCRDNGIPVKSTLKSISISVIDVNEYPPALK--VEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDN-DGFFEIDVFGNLKLMKPLDRELRPFHPL-VVLVTDNSPPNSRTTSLALN----ITISDINDNIPKLLEPTSF--HLYENLNGNSTIGQLKVSDPD--SGLNGKVKFLLI-----HAYTINDKLIKDKFFVNE----DDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQF---NFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL----SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFF---FGGETDRLSLTLIVAL 2493
++ ++ IE+ D NDNSPKF FV E + G A D D G N+ Y + + P + ++R + +++ + ++ A D G Q+ + + I DVNDN+P F N V + E T+L + + D+D R+ E EN F++ +G + L++ L+ ++ ++ L + A D + L V D N++AP + + P + + + + TV TD D +GNN KV Y + + F+ ++ + R L +++ V I+ +D G P LKS ++ + N+ ++ Y I E P+ S V+ +D + L +I+ N + FE+ + L+KPLDRE + L +VL + PP + + + ITI D NDN P + + E +I QL+ D D + N +V + + H +TI+ L+ FVN D G + E+I+R + P L + L++ DENDNEP FP E F N + SS R ASD D +++ + A D +F ++ +G L T+ + Y ++++ASD G K A++ ++V + F F T R L VAL
Sbjct: 2304 SYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEP--AFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF-PPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIEN---MSIFALDRYSGKLVLKRRLD-YELQQEYELDVIASDAAH---EARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTV---NATDADSEGNNSKV-------IYIIEPAQEGFSVHPSNGVVSVNMSR-LQPAVSSSGDYFVRIIAKDAGKPA---LKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSV---VLQLGQDA-LDQSLAIIAGNEESAFELLQSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTID--LVTGVLFVNNRLDYDSGA----------KSYELIIRACDSHHQRP-LCSLQPFRLELHDENDNEP--KFPLTEYVHFLAENEPVGSSVFR----------AHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESG-LVTSAFVFDYEQRQRYDMELLASDMG-----GKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVAL 2984 HSP 8 Score: 67.781 bits (164), Expect = 6.250e-11 Identity = 132/573 (23.04%), Postives = 222/573 (38.74%), Query Frame = 1
Query: 742 LCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI---NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVN--------EYPPA-LKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPF--HPLVVLVTDN----SPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTI----GQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFS---------IRPIDREVTSEIILRILLTDQGSP------SLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPE--NANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL 2331
L S L I + D NDN P F + + E V QV D D G N R+ + I NH + + + N I L + +I D + L I A D G ++ + ++D+N++ P+ +V + + + +I V G V+ E N S F L+R+ + KL++K+ LD EL + ++ D ++ L ++ V D N + PPA + P+ + I E L V+ V ATD D + N N K++ ++ F HP +V+ N P S + + I D P L T + N NG+ Q + ++ G V L D L + + ++ + F ++P+DRE LR++L+ P + S +++ + D NDN PI+ D + ++ IS A +R S I +QA D D N+ + + + S + ++FT++L+TG L N L
Sbjct: 2302 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTN--IVLDR-----EIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIE--NMSIFA-LDRY-----SGKLVLKRRLDYELQQEYELDVIASDAAHEARTVL---TVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGN-------------------NSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGK--PALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQ-----DALDQSLAIIAGNEESAFELLQSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIF----DRSAKYEAEISELAP---LRYS-IAQLQAIDADQENTPNSEVVYDITSGNDE----HMFTIDLVTGVLFVNNRL 2818 HSP 9 Score: 65.0846 bits (157), Expect = 4.419e-10 Identity = 101/423 (23.88%), Postives = 181/423 (42.79%), Query Frame = 1
Query: 178 VFEEVPVGKII---GHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMS--------AFINAQTWIKVFIEIIDINDNSPKFEYTS-FVVEFYENSQIGYS--QELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLK-LVLRGKVDYEKKSNRYFLTRVKACDAGEDQ-LCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKP---TLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRD 1389
+ E P+G ++ G D LAI + N+ F++ QSK ++ +KP LDRE+ D L +S + +N+ + I V I I+D NDN P F+ ++ + E E + + YS Q + D + PNS Y + D E M+T L + ++DY+ + Y L ++ACD+ + LCS + ++D NDN P F + E+ + +V++ DLD+G G++++ I P + + + F V S +G + + + ++ + + A D G S ++ D P + L + + + V + TD D G +G+V +LS + R S+ ++IK+ L + N+ + RD
Sbjct: 2657 ISEAAPLGSVVLQLGQDALDQSLAIIAG--NEESAFELL---QSKAIVLVKP----------LDRER-NDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGND--EHMFTIDLVTGVLFVNNRLDYDSGAKSYELI-IRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESG-LVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRD--EFTPQFTERTYRFVLPAAVALPQGYV----VGQVTATDSDSGPDGRVVYQLSAPHSHFKVNR-----SSGAVLIKRKLKLDGDGDGNLYMDGRD 3048 HSP 10 Score: 51.6026 bits (122), Expect = 6.462e-6 Identity = 130/597 (21.78%), Postives = 230/597 (38.53%), Query Frame = 1
Query: 328 SCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKF------EYTSF---VVEFYENSQIGYSQELPLATDIDI-GPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDE-----GENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHG-----AIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGN--NGKVNCELSN------------TSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATD--KDPDANLKLTL---ISDNDGF--FEIDVFGNLKLMK-PLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYEN---LNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPI 1977
S L + RLD E + ++ A A+T + V + D NDN+P F Y + + E E+ + + ATD D G NS Y +EP + F + P + V ++ S+ + R+ A DAG+ L S L + ND R FL+ +I E L V Q+ LD+ N +FE+ + L + + D+Y K L ++ HG ++ SS +I ++D N++ P I + + +I E ++A + D D+ N N +V ++++ T + R ++ S +++LII+ C + +L+ + + D N+ P + + + E+ PV SS + A+D K P L ++ SD + F +D L D E R + + +L +D + S+A+ + I ++ P+ E T + L +GQ+ +D DSG +G+V + L ++ F VN G + R +
Sbjct: 2484 SGKLVLKRRLDYELQQEYELDVIASDAAHEARTVLTVRVN--DENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVH--PSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAIIAGNEESAFELLQSKAIVLVK---PLDRERNDLY------------KLRLVLS-HPHGPPLISSLNSSSGISVIITILDANDNFP--IFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIR---------------ACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDM---GGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHS--------HFKVNRSSGAVLIKRKL 3032
BLAST of Protocadherin 11 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0339463) HSP 1 Score: 202.216 bits (513), Expect = 4.446e-52 Identity = 187/669 (27.95%), Postives = 304/669 (45.44%), Query Frame = 1
Query: 442 IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLD---LFELMYTP-----PRSLKLVLRGKVDYEKKSNRYFL-TRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDT---QLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND-GFFEI---DVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE--PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPP 2385
+ ++D ND+SP FE F E + +G + ATD DIG N+ Y +E + D L + P RS + R +D E + + L T A ++ + ++ + + D NDN P F + +V++ ED + TV + D D+G N + + I + FS+ S++GD+ L K L+ + + L I A+D G+ S+ +L+ NVID N++AP T + ++EN + + D D+G N ++ +S L T + KPLDRE +V +D G+P KS S+ I+V DVN+ PA + + ED P + V ATD D D+ L + + N G F I + G + + + LD + L V TD+ R+ + ++I I+D N+ P + E P S ++E+ +T+ + +D D G+N ++ + L + +IN D F +N G I + P+DRE TS +L + D G+PSLS + + V D NDN P + P + SI A + + ++ V ASDPD N I + L +I F ++ +G + TN L S ++ L +A D G PP
Sbjct: 452 VNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAII----GGNTQSQFSIDSMSGDVSLVKPLDYESV-RSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFY---TSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA---VDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS---GGRSDTATVHINITDANNFAP-IFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL-NEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSP-----LYQASILEDA----LVGTSVIQVAASDPDVGLNGRIKYLLSDR---DIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092 HSP 2 Score: 174.481 bits (441), Expect = 1.694e-43 Identity = 181/690 (26.23%), Postives = 309/690 (44.78%), Query Frame = 1
Query: 286 SHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIK-----VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPL----ATDIDIGPNSVHSYTL-----EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK--LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND---GFFEIDVF------GNLKLMKPLDRELRPFHPLVVLVTDNSPPN-SRTTSLALNITISDINDNIPKLLEP--TSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKD-KFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDN 2268
+ DQ + +I S + S LDRE D + ++ + +AQ+ + V ++++D NDN P+F ++ V+ E+ Q G +++ + ATD D G N+ Y + + + + S + L +DYE S R + ++A D G + L +++ D NDN P F ++E+ + + +V D DEG N +++ I+ +N +V G + K L+ + +F + A+D G P S+ ++ V D+N++ P+ K N + E+ T V + TD D+ + NT R+ TS + + I + LD + +++ D+G +S ++ I++ D N + P + P + ED PV ++ V ATD D N ++T + + G D F G + PLDRE + L V D P+ S TT + + +T D+NDN P P + L + L G S I Q+ SDPD GLNG++K+LL +D+ I+D F ++ GTI + + +DRE + L + D+GSP LS ++ +++ D ND+ P TF SD+ I+ S S + + A DPD NA + + +I N
Sbjct: 513 AQDQEMPIFRIDSRSGVISTRSSLDRE-TSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPED-QWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSM------SGDVSLVKPLDYE--SVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFP----LAVDPRTGWVQTIKPLDR-EEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEAN---VGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTR-----GRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVT--DVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVGLNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPP--TFASDK-------ITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSN 1159 HSP 3 Score: 169.088 bits (427), Expect = 7.496e-42 Identity = 167/571 (29.25%), Postives = 260/571 (45.53%), Query Frame = 1
Query: 433 KVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGD--IYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFT--SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLT-LISDN---DGFFEID-VFGNLKLMKPLDRE-LRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLL-EPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTS---EIILRILLTDQGSPSLSHEEKIVLKVADENDNEPI 2100
++ + +ID NDN+P+F + F EN +GY+ A D D G N+ +Y++ D F L P ++ +D E++ F +V A D G + ++ I++ DVNDN P F + ED V V D D E+ R+ +EI T N R F++ S NG I + +SL+ +F L + A D G S + N+ D NN AP P + E+ TTV ++ TD D G N ++ L+ S + F+ T ++ PLDRE S +++ +D G P S + I V DVN+ PA K P Y I ED V +S +V A+D D N ++ L+SD DG F ID G ++ K LDRE + FH + V SPP S T + + I + D+ND+ P + + ++ EN S +G++ DPD G+N V + +I N + + + + ++ +D E T E+++R SP L ++ I + V D NDN P+
Sbjct: 674 QLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIK-PLDREEQGR--FAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEI--TTGNTRGR--FAITSQNGRGLITIAQSLD-YKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPY---SASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFK-SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSST--VEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTR--PGSERAQLLTMTELDYESTRKRFELVVRA-----ASPPLRNDAHIEILVTDVNDNAPV 1219 HSP 4 Score: 143.28 bits (360), Expect = 6.346e-34 Identity = 175/674 (25.96%), Postives = 286/674 (42.43%), Query Frame = 1
Query: 454 DINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFE--LMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENR-LARRY----FSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIP---LSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMT---TVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEIDV---FGNLKLMKPLDRELRPFHPLVVLVTDNS-PPNSRTTSLALNITISDINDNIPKLLEPTSF--HLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGT--IFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKL----ISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRP 2382
++ + SP FE +V E G + A D + P Y++ LLD L R+ + +D E YF RV A D L +++ D ND+ P F I E + TV + D D G+N + + I + LA+ F + S +G I R SL+ + D +HL +TA D + ++ + V+D N++ P + Q+ E+ G T TVA I TD D+GNN + + NT ++ S + + + KPLD E + S + I +D G P +S + ++VID N+ P + E++PV + +V A D D AN ++T IS+ D F + V G ++ +KPLDRE + V+ D PP S ++S+ IT+ D+NDN P P + ++ E+ + + + +DPD +H Y I + +F + +G I + +D + +L + TD G S + + + D N+ PI+ EN ++ S+ A V + +V V A+D D NA I++ L I+ P F++ TG + TN L + Y+L + A D G P
Sbjct: 351 ELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVV---YSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYF--RVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDR-ETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY---TVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQ-----SQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVV--ITVQDVNDNDPA-FNPKYYEANVGEDQPPGTPVTTVTATDPDEDSR-------LH-YEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF-----ENAPYSASVFEDAP---VGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP 985 HSP 5 Score: 120.168 bits (300), Expect = 7.074e-27 Identity = 109/399 (27.32%), Postives = 182/399 (45.61%), Query Frame = 1
Query: 1306 SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL----ISDNDGF--------FEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNS--RTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNS---TIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEP-IWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
S T + LDRELM +V D+ P +S ++ ++V+D N++ P + E I E V S+ + ATD+D N ++ ++D G F ID G + LDRE + L+V D + S RT + ++ + + D NDN P+ E T + + E+ G + T+ ++ +D D G N +++ +I T + +F ++ G + ++P+D E L I D GSPS S+ ++++ V D NDN P +T E+ N + + I+ VQA D D NA I++ IS DN P+ ++ TG + T L +G + +++A D G PPK S +++ I V N
Sbjct: 411 SRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNT------QSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYN----------IIRVQAYDSDEGANAEITYS-ISERDDNFPL---AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPK-SASSSVVITVQDVN 788 HSP 6 Score: 120.168 bits (300), Expect = 8.100e-27 Identity = 136/488 (27.87%), Postives = 217/488 (44.47%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLAR-RYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNT----SYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDAN--LKLTLIS--DNDGFFEIDVFGN----LKLMKPLDRE-LRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPD 1854
V I + D+NDN P F + E+ G ATD D + T F + R L + + +DY K+ R+ LT V A D+G + +++NI+ D N+ PIF S + ED + TV V D D G N ++++ +N N L FS+ G I L+ + + L +TA+D G LS + V D+N++AP+ K L + I+E+ + T+V + +D D G NG++ LS+ FVI + TS T + K LDRE ++ +++ + D G P S+ + I + DVN+ PP + +PE+ PV S ++ A D D N + ++I D++ F + G+ L M LD E R LVV SPP + I ++D+NDN P L + F+ + + + IG++ D D
Sbjct: 780 VVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGL-ITIAQSLDY-KQEKRFLLT-VAATDSGGRSDTATVHINIT--DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDR-ETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAF--KSPL-YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVI----DPTSGTIR--TNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRAA--SPP--LRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDAD 1248
BLAST of Protocadherin 11 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304900) HSP 1 Score: 202.216 bits (513), Expect = 4.553e-52 Identity = 187/669 (27.95%), Postives = 304/669 (45.44%), Query Frame = 1
Query: 442 IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLD---LFELMYTP-----PRSLKLVLRGKVDYEKKSNRYFL-TRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDT---QLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND-GFFEI---DVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE--PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPP 2385
+ ++D ND+SP FE F E + +G + ATD DIG N+ Y +E + D L + P RS + R +D E + + L T A ++ + ++ + + D NDN P F + +V++ ED + TV + D D+G N + + I + FS+ S++GD+ L K L+ + + L I A+D G+ S+ +L+ NVID N++AP T + ++EN + + D D+G N ++ +S L T + KPLDRE +V +D G+P KS S+ I+V DVN+ PA + + ED P + V ATD D D+ L + + N G F I + G + + + LD + L V TD+ R+ + ++I I+D N+ P + E P S ++E+ +T+ + +D D G+N ++ + L + +IN D F +N G I + P+DRE TS +L + D G+PSLS + + V D NDN P + P + SI A + + ++ V ASDPD N I + L +I F ++ +G + TN L S ++ L +A D G PP
Sbjct: 452 VNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAII----GGNTQSQFSIDSMSGDVSLVKPLDYESV-RSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFY---TSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLA---VDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS---GGRSDTATVHINITDANNFAP-IFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL-NEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSP-----LYQASILEDA----LVGTSVIQVAASDPDVGLNGRIKYLLSDR---DIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092 HSP 2 Score: 174.481 bits (441), Expect = 1.734e-43 Identity = 181/690 (26.23%), Postives = 309/690 (44.78%), Query Frame = 1
Query: 286 SHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIK-----VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPL----ATDIDIGPNSVHSYTL-----EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK--LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND---GFFEIDVF------GNLKLMKPLDRELRPFHPLVVLVTDNSPPN-SRTTSLALNITISDINDNIPKLLEP--TSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKD-KFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDN 2268
+ DQ + +I S + S LDRE D + ++ + +AQ+ + V ++++D NDN P+F ++ V+ E+ Q G +++ + ATD D G N+ Y + + + + S + L +DYE S R + ++A D G + L +++ D NDN P F ++E+ + + +V D DEG N +++ I+ +N +V G + K L+ + +F + A+D G P S+ ++ V D+N++ P+ K N + E+ T V + TD D+ + NT R+ TS + + I + LD + +++ D+G +S ++ I++ D N + P + P + ED PV ++ V ATD D N ++T + + G D F G + PLDRE + L V D P+ S TT + + +T D+NDN P P + L + L G S I Q+ SDPD GLNG++K+LL +D+ I+D F ++ GTI + + +DRE + L + D+GSP LS ++ +++ D ND+ P TF SD+ I+ S S + + A DPD NA + + +I N
Sbjct: 513 AQDQEMPIFRIDSRSGVISTRSSLDRE-TSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPED-QWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSM------SGDVSLVKPLDYE--SVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFP----LAVDPRTGWVQTIKPLDR-EEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEAN---VGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTR-----GRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVT--DVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVGLNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPP--TFASDK-------ITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSN 1159 HSP 3 Score: 169.088 bits (427), Expect = 7.170e-42 Identity = 167/571 (29.25%), Postives = 260/571 (45.53%), Query Frame = 1
Query: 433 KVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGD--IYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFT--SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLT-LISDN---DGFFEID-VFGNLKLMKPLDRE-LRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLL-EPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTS---EIILRILLTDQGSPSLSHEEKIVLKVADENDNEPI 2100
++ + +ID NDN+P+F + F EN +GY+ A D D G N+ +Y++ D F L P ++ +D E++ F +V A D G + ++ I++ DVNDN P F + ED V V D D E+ R+ +EI T N R F++ S NG I + +SL+ +F L + A D G S + N+ D NN AP P + E+ TTV ++ TD D G N ++ L+ S + F+ T ++ PLDRE S +++ +D G P S + I V DVN+ PA K P Y I ED V +S +V A+D D N ++ L+SD DG F ID G ++ K LDRE + FH + V SPP S T + + I + D+ND+ P + + ++ EN S +G++ DPD G+N V + +I N + + + + ++ +D E T E+++R SP L ++ I + V D NDN P+
Sbjct: 674 QLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIK-PLDREEQGR--FAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEI--TTGNTRGR--FAITSQNGRGLITIAQSLD-YKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPY---SASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFK-SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSST--VEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTR--PGSERAQLLTMTELDYESTRKRFELVVRA-----ASPPLRNDAHIEILVTDVNDNAPV 1219 HSP 4 Score: 143.28 bits (360), Expect = 6.724e-34 Identity = 175/674 (25.96%), Postives = 286/674 (42.43%), Query Frame = 1
Query: 454 DINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFE--LMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENR-LARRY----FSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIP---LSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMT---TVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEIDV---FGNLKLMKPLDRELRPFHPLVVLVTDNS-PPNSRTTSLALNITISDINDNIPKLLEPTSF--HLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGT--IFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKL----ISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRP 2382
++ + SP FE +V E G + A D + P Y++ LLD L R+ + +D E YF RV A D L +++ D ND+ P F I E + TV + D D G+N + + I + LA+ F + S +G I R SL+ + D +HL +TA D + ++ + V+D N++ P + Q+ E+ G T TVA I TD D+GNN + + NT ++ S + + + KPLD E + S + I +D G P +S + ++VID N+ P + E++PV + +V A D D AN ++T IS+ D F + V G ++ +KPLDRE + V+ D PP S ++S+ IT+ D+NDN P P + ++ E+ + + + +DPD +H Y I + +F + +G I + +D + +L + TD G S + + + D N+ PI+ EN ++ S+ A V + +V V A+D D NA I++ L I+ P F++ TG + TN L + Y+L + A D G P
Sbjct: 351 ELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVV---YSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYF--RVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDR-ETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY---TVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQ-----SQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVV--ITVQDVNDNDPA-FNPKYYEANVGEDQPPGTPVTTVTATDPDEDSR-------LH-YEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF-----ENAPYSASVFEDAP---VGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP 985 HSP 5 Score: 120.168 bits (300), Expect = 7.497e-27 Identity = 109/399 (27.32%), Postives = 182/399 (45.61%), Query Frame = 1
Query: 1306 SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL----ISDNDGF--------FEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNS--RTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNS---TIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEP-IWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
S T + LDRELM +V D+ P +S ++ ++V+D N++ P + E I E V S+ + ATD+D N ++ ++D G F ID G + LDRE + L+V D + S RT + ++ + + D NDN P+ E T + + E+ G + T+ ++ +D D G N +++ +I T + +F ++ G + ++P+D E L I D GSPS S+ ++++ V D NDN P +T E+ N + + I+ VQA D D NA I++ IS DN P+ ++ TG + T L +G + +++A D G PPK S +++ I V N
Sbjct: 411 SRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNT------QSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYN----------IIRVQAYDSDEGANAEITYS-ISERDDNFPL---AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPK-SASSSVVITVQDVN 788 HSP 6 Score: 120.168 bits (300), Expect = 8.159e-27 Identity = 136/488 (27.87%), Postives = 217/488 (44.47%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLAR-RYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNT----SYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDAN--LKLTLIS--DNDGFFEIDVFGN----LKLMKPLDRE-LRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPD 1854
V I + D+NDN P F + E+ G ATD D + T F + R L + + +DY K+ R+ LT V A D+G + +++NI+ D N+ PIF S + ED + TV V D D G N ++++ +N N L FS+ G I L+ + + L +TA+D G LS + V D+N++AP+ K L + I+E+ + T+V + +D D G NG++ LS+ FVI + TS T + K LDRE ++ +++ + D G P S+ + I + DVN+ PP + +PE+ PV S ++ A D D N + ++I D++ F + G+ L M LD E R LVV SPP + I ++D+NDN P L + F+ + + + IG++ D D
Sbjct: 780 VVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGL-ITIAQSLDY-KQEKRFLLT-VAATDSGGRSDTATVHINIT--DANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDR-ETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAF--KSPL-YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVI----DPTSGTIR--TNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRAA--SPP--LRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDAD 1248
BLAST of Protocadherin 11 vs. Ensembl Zebrafish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 243.817 bits (621), Expect = 4.128e-66 Identity = 233/776 (30.03%), Postives = 356/776 (45.88%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSS-RLDREQLCDKSN----CILQ----MSAFINAQT--WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP---LLDLFELMYTPPRSLKL---VLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHT--PENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFT---SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL--TLISDND--GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHS 2394
V EE P +IG + D L + L+ + + +++ ++ D+F + +DRE L D N C L+ ++ I Q+ I+ IE+ DINDN+P+F + EN+ +G +PLATD D N V YTL + LF L R KL ++ G +D E K + Y LT +KA D G S L + I D NDN P F K + + E++ + +V QV D D G NG + + ++ P +L R + +G IY++ L+ +I + + ARD G P SS+ + +V D N++AP++ ++ +G I E+ T VAL+ V+D D+G N V C ++ F + + + + L PLD E + V IV D+G P S+ S+ + V D N+ P E+ +V+A+D D N +L ++I+D+ G FEID G ++ PLDRE + + V D P+ R T+ + I + D NDN PK +L SF + EN+ S +G + V D D G N +V+ + + KF + GTI S DRE S R+ D G P S + + V DENDN P+ T PS N+ F +S AA SV E V+A D DS NA +L+ + P LF + G + EL+ GL+ L + SD G+P +H+
Sbjct: 29 VHEEQPPSTLIGSLAADQGLP------DTGHLYKL---EVGAPYLRVDGKTGDIFTTEIPIDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVPENTHMGALFSIPLATDKDTERNGVADYTLTAGPEAVALFGLQVAEDRGEKLPQLIVLGSLDRELK-DSYDLT-IKAVDGGNPPRYSSALLRVVIADANDNAPKFEKSSYEAEVAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDPVPKLLR----IDRSSGIIYVKGPLDREEI-NNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIR-GIGLVTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFAEENQPGEKVVEVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVV-IKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSV--------EPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPS--NSSF-IRLSPMAAPDSVVEV----VEAEDIDSGSNA----ELVYSIAGGNPHDLFYISPSNGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHA 767
BLAST of Protocadherin 11 vs. Ensembl Zebrafish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 244.588 bits (623), Expect = 6.202e-66 Identity = 233/776 (30.03%), Postives = 356/776 (45.88%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSS-RLDREQLCDKSN----CILQ----MSAFINAQT--WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP---LLDLFELMYTPPRSLKL---VLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHT--PENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFT---SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL--TLISDND--GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHS 2394
V EE P +IG + D L + L+ + + +++ ++ D+F + +DRE L D N C L+ ++ I Q+ I+ IE+ DINDN+P+F + EN+ +G +PLATD D N V YTL + LF L R KL ++ G +D E K + Y LT +KA D G S L + I D NDN P F K + + E++ + +V QV D D G NG + + ++ P +L R + +G IY++ L+ +I + + ARD G P SS+ + +V D N++AP++ ++ +G I E+ T VAL+ V+D D+G N V C ++ F + + + + L PLD E + V IV D+G P S+ S+ + V D N+ P E+ +V+A+D D N +L ++I+D+ G FEID G ++ PLDRE + + V D P+ R T+ + I + D NDN PK +L SF + EN+ S +G + V D D G N +V+ + + KF + GTI S DRE S R+ D G P S + + V DENDN P+ T PS N+ F +S AA SV E V+A D DS NA +L+ + P LF + G + EL+ GL+ L + SD G+P +H+
Sbjct: 29 VHEEQPPSTLIGSLAADQGLP------DTGHLYKL---EVGAPYLRVDGKTGDIFTTEIPIDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVPENTHMGALFSIPLATDKDTERNGVADYTLTAGPEAVALFGLQVAEDRGEKLPQLIVLGSLDRELK-DSYDLT-IKAVDGGNPPRYSSALLRVVIADANDNAPKFEKSSYEAEVAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDPVPKLLR----IDRSSGIIYVKGPLDREEI-NNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIR-GIGLVTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFAEENQPGEKVVEVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVV-IKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSV--------EPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPS--NSSF-IRLSPMAAPDSVVEV----VEAEDIDSGSNA----ELVYSIAGGNPHDLFYISPSNGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHA 767
BLAST of Protocadherin 11 vs. Ensembl Zebrafish
Match: pcdh7b (protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]) HSP 1 Score: 232.646 bits (592), Expect = 2.437e-62 Identity = 221/820 (26.95%), Postives = 359/820 (43.78%), Query Frame = 1
Query: 352 RLDREQL--C----DKSNCIL--QMSAFINAQTWIKVF---IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL--------------------------------EPLLDLFELMYT----PPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK----LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT--LISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFF-------------------FGGET--DRLSLTLIVALASVTCIICVSLLVAIIIVRRH 2556
R+DRE+L C D++ C + ++S AQ+W+ +F + I+DINDN+P F + EN IG LP ATD D G N + Y L +FEL + +L+++G +D E++ + RV+ D G+ S+ L + I DVNDN P F K + E++ + Q+ D D G NG++ + E+ RR + G + + ++ D+ + + ARD G P + + +I N+ D N++ P+I ++ +G + E+ I T +AL+ V+D DKG NG V C + F + E K L PLD E + NV IV D+G P S+ S+ + V D+N+ PP PE+ V+A D D N +++ L S +G F ID G++++ LDRE + V+ D P + ++ + + ++D NDN PK ++ +F++ ENL NS +G + V D D G N + + I F ++ + GTIFS DRE + R+ D G P S + L V D NDN P FP NN + SS R VR V A+D D+ NAN+S++++ P LF ++ TG + G+L + GL+ L + +D+G P S+ T + +Y + + F G+ D L +A+ V+ I+ V L++ ++++ R+
Sbjct: 84 RIDREKLPQCQMIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGESTVRRIGTSGSGSVDSHSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVR--DGGDPPRSSQAILRVMITDVNDNTPRFEKSVYEADLPENSSPGAPILQLKAGDTDVGVNGQIEYVFGAATES--VRRLLRLDESTGWLSVLHRIDREDV-SQLRFTVMARDRGQPPKTDKATVIINIKDENDNVPNIDIR-KIGRIFLKDGVANVAEDVIVDTPIALVQVSDRDKGPNGIVTCTVVGDVPFQLKPASEVEGDMNKKKYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPPVFSKSTVEVSFPENNAPGERVVTVVALDADSGKNAEISYSLDSSVNGIFSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVV-VLVADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGQNADMSLYIEEEENI--------FSIDNNTGTIFSNMAFDREQRNNYSFRVKAVDGGDPPRSATATVSLSVMDVNDNPPTVLFPM--NNSYTLLPPSSNIRTVVR-----TVSATDTDTGVNANLSYRIVGGN----PFKLFDMDAWTGVISLVGKLEQKHFGLHRLVVQVNDSGVP---SQSTTTLVHIYVNETLFNSTIVEAQVAKSLSTPLNADIAGDPNYDLGKQRLSIAIGVVSGIMTVILIILVVVMARY 874 HSP 2 Score: 119.013 bits (297), Expect = 1.528e-26 Identity = 147/581 (25.30%), Postives = 253/581 (43.55%), Query Frame = 1
Query: 253 GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFIN----AQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLD-LFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRP---------IFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVK---SINGDIYLRKSLNSIDIP------DKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEID-----VFGNLKLMKPLDRELRPFHPLVVLVTDNS-PPNSRTTSLALNITISDINDNIPKLLEP--TSFHLY-ENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHA 1896
G ++ +F++ D + G + +P+ L + LDREQ D L++ + +Q ++V I D+NDN+P+FE + + + ENS G A D D+G N Y + + L+ + L + ++D E S F V A D G+ K + I+I D NDN P IFLK + + ED ++ + V V D D+G NG V+ + + F +K + GD+ +K P ++++ I A D G+ LSS LI V D+N++ P + K T+ + EN V ++ D D G N +++ L ++ + + + T + + LDRE ++ +D G+PV ++ + V D N+ P + I E+L NS + D D N ++L I + + F ID +F N+ DRE R + V D PP S T +++L ++ D+NDN P +L P S+ L + N + + + +D D+G+N + + ++
Sbjct: 208 GASRSSVFELQVADTTDG--EKQPQ---LIIKGALDREQR-DSYELTLRVRDGGDPPRSSQAILRVMI--TDVNDNTPRFEKSVYEADLPENSSPGAPILQLKAGDTDVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREDVSQLRFT--VMARDRGQPPKTDKATVIINIKDENDNVPNIDIRKIGRIFLK-DGVANVAEDVIVDTPIALVQVSDRDKGPNGIVTCTV-------VGDVPFQLKPASEVEGDMNKKKYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPP-VFSKSTV--EVSFPENNAPGERVVTVVALDADSGKNAEISYSLDSSVNGI----FSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVVVLVADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGQNADMSLYIEEEENIFSIDNNTGTIFSNMA----FDREQRNNYSFRVKAVDGGDPPRSATATVSL--SVMDVNDNPPTVLFPMNNSYTLLPPSSNIRTVVRTVSATDTDTGVNANLSYRIVGG 757 HSP 3 Score: 105.916 bits (263), Expect = 1.518e-22 Identity = 130/534 (24.34%), Postives = 233/534 (43.63%), Query Frame = 1
Query: 220 IKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQT-WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQEL----PLA----TDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFL---------------TRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFT--SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPAL--KVEPSYNVIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDND-GFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSL 1725
+K +G NG + + + + + ++++ + L V R+DRE + ++ +T V I I D NDN P + F ++ ++++ P+A +D D GPN + + T+ + P LK + D KK +YFL + A D+G L S +L + + D+NDN P+F K V E+ + V V+ D D G+N +S+ ++ + FS+ + GDI + L+ + +++ + A+D G L ++ V D N++ P + I EN + V +I V D DKG N ++ S ++ E F+ ++T + DRE ++ + + D G P +S ++S+SV+DVN+ PP + + SY ++P + + V ATD D +ANL ++ N F++D + G + L+ L+++ H LVV V D+ P+ TT+L
Sbjct: 301 LKAGDTDVGVNG--QIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREDVSQLRFTVMARDRGQPPKTDKATVIINIKDENDNVPNIDIRKIGRIFLKDGVANVAEDVIVDTPIALVQVSDRDKGPNGIVTCTV---------VGDVPFQLKPASEVEGDMNKK--KYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPPVFSKSTVEVSFPENNAPGERVVTVVALDADSGKNAEISYSLDSS-----VNGIFSIDADTGDIRVNTILDR-EQTERYEFKVIAKDKGMPVLQGSATVVVLVADKNDNEPKFMQDVF---TFYIQENLQPNSPVGMITVMDADKGQN-------ADMSLYIEEEENIFSIDNNTGTIFSNMAFDREQRNNYSFRVKAVDGGDPPRSATATVSLSVMDVNDNPPTVLFPMNNSYTLLPPSSNIRTVVRTVSATDTDTGVNANLSYRIVGGNPFKLFDMDAWTGVISLVGKLEQKHFGLHRLVVQVNDSGVPSQSTTTL 805
BLAST of Protocadherin 11 vs. Ensembl Zebrafish
Match: pcdh7b (protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]) HSP 1 Score: 233.032 bits (593), Expect = 2.564e-62 Identity = 221/820 (26.95%), Postives = 359/820 (43.78%), Query Frame = 1
Query: 352 RLDREQL--C----DKSNCIL--QMSAFINAQTWIKVF---IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL--------------------------------EPLLDLFELMYT----PPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK----LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT--LISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFF-------------------FGGET--DRLSLTLIVALASVTCIICVSLLVAIIIVRRH 2556
R+DRE+L C D++ C + ++S AQ+W+ +F + I+DINDN+P F + EN IG LP ATD D G N + Y L +FEL + +L+++G +D E++ + RV+ D G+ S+ L + I DVNDN P F K + E++ + Q+ D D G NG++ + E+ RR + G + + ++ D+ + + ARD G P + + +I N+ D N++ P+I ++ +G + E+ I T +AL+ V+D DKG NG V C + F + E K L PLD E + NV IV D+G P S+ S+ + V D+N+ PP PE+ V+A D D N +++ L S +G F ID G++++ LDRE + V+ D P + ++ + + ++D NDN PK ++ +F++ ENL NS +G + V D D G N + + I F ++ + GTIFS DRE + R+ D G P S + L V D NDN P FP NN + SS R VR V A+D D+ NAN+S++++ P LF ++ TG + G+L + GL+ L + +D+G P S+ T + +Y + + F G+ D L +A+ V+ I+ V L++ ++++ R+
Sbjct: 84 RIDREKLPQCQMIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGESTVRRIGTSGSGSVDSHSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVR--DGGDPPRSSQAILRVMITDVNDNTPRFEKSVYEADLPENSSPGAPILQLKAGDTDVGVNGQIEYVFGAATES--VRRLLRLDESTGWLSVLHRIDREDV-SQLRFTVMARDRGQPPKTDKATVIINIKDENDNVPNIDIR-KIGRIFLKDGVANVAEDVIVDTPIALVQVSDRDKGPNGIVTCTVVGDVPFQLKPASEVEGDMNKKKYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPPVFSKSTVEVSFPENNAPGERVVTVVALDADSGKNAEISYSLDSSVNGIFSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVV-VLVADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGQNADMSLYIEEEENI--------FSIDNNTGTIFSNMAFDREQRNNYSFRVKAVDGGDPPRSATATVSLSVMDVNDNPPTVLFPM--NNSYTLLPPSSNIRTVVR-----TVSATDTDTGVNANLSYRIVGGN----PFKLFDMDAWTGVISLVGKLEQKHFGLHRLVVQVNDSGVP---SQSTTTLVHIYVNETLFNSTIVEAQVAKSLSTPLNADIAGDPNYDLGKQRLSIAIGVVSGIMTVILIILVVVMARY 874 HSP 2 Score: 119.013 bits (297), Expect = 1.426e-26 Identity = 147/581 (25.30%), Postives = 251/581 (43.20%), Query Frame = 1
Query: 253 GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFIN----AQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLD-LFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRP---------IFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVK---SINGDIYLRKSLNSIDIP------DKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEID-----VFGNLKLMKPLDRELRPFHPLVVLVTDNS-PPNSRTTSLALNITISDINDNIPKLLEP--TSFHLY-ENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHA 1896
G ++ +F++ D + G Q + L + LDREQ D L++ + +Q ++V I D+NDN+P+FE + + + ENS G A D D+G N Y + + L+ + L + ++D E S F V A D G+ K + I+I D NDN P IFLK + + ED ++ + V V D D+G NG V+ + + F +K + GD+ +K P ++++ I A D G+ LSS LI V D+N++ P + K T+ + EN V ++ D D G N +++ L ++ + + + T + + LDRE ++ +D G+PV ++ + V D N+ P + I E+L NS + D D N ++L I + + F ID +F N+ DRE R + V D PP S T +++L++ D+NDN P +L P S+ L + N + + + +D D+G+N + + ++
Sbjct: 208 GASRSSVFELQVADTTDGEKQPQ-----LIIKGALDREQR-DSYELTLRVRDGGDPPRSSQAILRVMI--TDVNDNTPRFEKSVYEADLPENSSPGAPILQLKAGDTDVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREDVSQLRFT--VMARDRGQPPKTDKATVIINIKDENDNVPNIDIRKIGRIFLK-DGVANVAEDVIVDTPIALVQVSDRDKGPNGIVTCTV-------VGDVPFQLKPASEVEGDMNKKKYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPP-VFSKSTV--EVSFPENNAPGERVVTVVALDADSGKNAEISYSLDSSVNGI----FSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVVVLVADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGQNADMSLYIEEEENIFSIDNNTGTIFSNMA----FDREQRNNYSFRVKAVDGGDPPRSATATVSLSVM--DVNDNPPTVLFPMNNSYTLLPPSSNIRTVVRTVSATDTDTGVNANLSYRIVGG 757 HSP 3 Score: 106.301 bits (264), Expect = 1.288e-22 Identity = 127/495 (25.66%), Postives = 219/495 (44.24%), Query Frame = 1
Query: 337 LFVSSRLDREQLCDKSNCILQMSAFINAQT-WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQEL----PLA----TDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFL---------------TRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFT--SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPAL--KVEPSYNVIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDND-GFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSL 1725
L V R+DRE + ++ +T V I I D NDN P + F ++ ++++ P+A +D D GPN + + T+ + D+ P LK + D KK +YFL + A D+G L S +L + + D+NDN P+F K V E+ + V V+ D D G+N +S+ ++ + FS+ + GDI + L+ + +++ + A+D G L ++ V D N++ P + I EN + V +I V D DKG N ++ S ++ E F+ ++T + DRE ++ + + D G P +S ++S+SV+DVN+ PP + + SY ++P + + V ATD D +ANL ++ N F++D + G + L+ L+++ H LVV V D+ P+ TT+L
Sbjct: 338 LSVLHRIDREDVSQLRFTVMARDRGQPPKTDKATVIINIKDENDNVPNIDIRKIGRIFLKDGVANVAEDVIVDTPIALVQVSDRDKGPNGIVTCTV--VGDV-------PFQLKPASEVEGDMNKK--KYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPPVFSKSTVEVSFPENNAPGERVVTVVALDADSGKNAEISYSLDSS-----VNGIFSIDADTGDIRVNTILDR-EQTERYEFKVIAKDKGMPVLQGSATVVVLVADKNDNEPKFMQDVF---TFYIQENLQPNSPVGMITVMDADKGQN-------ADMSLYIEEEENIFSIDNNTGTIFSNMAFDREQRNNYSFRVKAVDGGDPPRSATATVSLSVMDVNDNPPTVLFPMNNSYTLLPPSSNIRTVVRTVSATDTDTGVNANLSYRIVGGNPFKLFDMDAWTGVISLVGKLEQKHFGLHRLVVQVNDSGVPSQSTTTL 805
BLAST of Protocadherin 11 vs. Ensembl Zebrafish
Match: pcdh7b (protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]) HSP 1 Score: 233.417 bits (594), Expect = 3.458e-62 Identity = 221/820 (26.95%), Postives = 359/820 (43.78%), Query Frame = 1
Query: 352 RLDREQL--C----DKSNCIL--QMSAFINAQTWIKVF---IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL--------------------------------EPLLDLFELMYT----PPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK----LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT--LISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFF-------------------FGGET--DRLSLTLIVALASVTCIICVSLLVAIIIVRRH 2556
R+DRE+L C D++ C + ++S AQ+W+ +F + I+DINDN+P F + EN IG LP ATD D G N + Y L +FEL + +L+++G +D E++ + RV+ D G+ S+ L + I DVNDN P F K + E++ + Q+ D D G NG++ + E+ RR + G + + ++ D+ + + ARD G P + + +I N+ D N++ P+I ++ +G + E+ I T +AL+ V+D DKG NG V C + F + E K L PLD E + NV IV D+G P S+ S+ + V D+N+ PP PE+ V+A D D N +++ L S +G F ID G++++ LDRE + V+ D P + ++ + + ++D NDN PK ++ +F++ ENL NS +G + V D D G N + + I F ++ + GTIFS DRE + R+ D G P S + L V D NDN P FP NN + SS R VR V A+D D+ NAN+S++++ P LF ++ TG + G+L + GL+ L + +D+G P S+ T + +Y + + F G+ D L +A+ V+ I+ V L++ ++++ R+
Sbjct: 84 RIDREKLPQCQMIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGESTVRRIGTSGSGSVDSHSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVR--DGGDPPRSSQAILRVMITDVNDNTPRFEKSVYEADLPENSSPGAPILQLKAGDTDVGVNGQIEYVFGAATES--VRRLLRLDESTGWLSVLHRIDREDV-SQLRFTVMARDRGQPPKTDKATVIINIKDENDNVPNIDIR-KIGRIFLKDGVANVAEDVIVDTPIALVQVSDRDKGPNGIVTCTVVGDVPFQLKPASEVEGDMNKKKYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPPVFSKSTVEVSFPENNAPGERVVTVVALDADSGKNAEISYSLDSSVNGIFSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVV-VLVADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGQNADMSLYIEEEENI--------FSIDNNTGTIFSNMAFDREQRNNYSFRVKAVDGGDPPRSATATVSLSVMDVNDNPPTVLFPM--NNSYTLLPPSSNIRTVVR-----TVSATDTDTGVNANLSYRIVGGN----PFKLFDMDAWTGVISLVGKLEQKHFGLHRLVVQVNDSGVP---SQSTTTLVHIYVNETLFNSTIVEAQVAKSLSTPLNADIAGDPNYDLGKQRLSIAIGVVSGIMTVILIILVVVMARY 874 HSP 2 Score: 119.398 bits (298), Expect = 1.145e-26 Identity = 147/581 (25.30%), Postives = 251/581 (43.20%), Query Frame = 1
Query: 253 GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFIN----AQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLD-LFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRP---------IFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVK---SINGDIYLRKSLNSIDIP------DKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEID-----VFGNLKLMKPLDRELRPFHPLVVLVTDNS-PPNSRTTSLALNITISDINDNIPKLLEP--TSFHLY-ENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHA 1896
G ++ +F++ D + G Q + L + LDREQ D L++ + +Q ++V I D+NDN+P+FE + + + ENS G A D D+G N Y + + L+ + L + ++D E S F V A D G+ K + I+I D NDN P IFLK + + ED ++ + V V D D+G NG V+ + + F +K + GD+ +K P ++++ I A D G+ LSS LI V D+N++ P + K T+ + EN V ++ D D G N +++ L ++ + + + T + + LDRE ++ +D G+PV ++ + V D N+ P + I E+L NS + D D N ++L I + + F ID +F N+ DRE R + V D PP S T +++L++ D+NDN P +L P S+ L + N + + + +D D+G+N + + ++
Sbjct: 208 GASRSSVFELQVADTTDGEKQPQ-----LIIKGALDREQR-DSYELTLRVRDGGDPPRSSQAILRVMI--TDVNDNTPRFEKSVYEADLPENSSPGAPILQLKAGDTDVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREDVSQLRFT--VMARDRGQPPKTDKATVIINIKDENDNVPNIDIRKIGRIFLK-DGVANVAEDVIVDTPIALVQVSDRDKGPNGIVTCTV-------VGDVPFQLKPASEVEGDMNKKKYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPP-VFSKSTV--EVSFPENNAPGERVVTVVALDADSGKNAEISYSLDSSVNGI----FSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVVVLVADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGQNADMSLYIEEEENIFSIDNNTGTIFSNMA----FDREQRNNYSFRVKAVDGGDPPRSATATVSLSVM--DVNDNPPTVLFPMNNSYTLLPPSSNIRTVVRTVSATDTDTGVNANLSYRIVGG 757 HSP 3 Score: 106.301 bits (264), Expect = 1.290e-22 Identity = 127/495 (25.66%), Postives = 219/495 (44.24%), Query Frame = 1
Query: 337 LFVSSRLDREQLCDKSNCILQMSAFINAQT-WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQEL----PLA----TDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFL---------------TRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFT--SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPAL--KVEPSYNVIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDND-GFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSL 1725
L V R+DRE + ++ +T V I I D NDN P + F ++ ++++ P+A +D D GPN + + T+ + D+ P LK + D KK +YFL + A D+G L S +L + + D+NDN P+F K V E+ + V V+ D D G+N +S+ ++ + FS+ + GDI + L+ + +++ + A+D G L ++ V D N++ P + I EN + V +I V D DKG N ++ S ++ E F+ ++T + DRE ++ + + D G P +S ++S+SV+DVN+ PP + + SY ++P + + V ATD D +ANL ++ N F++D + G + L+ L+++ H LVV V D+ P+ TT+L
Sbjct: 338 LSVLHRIDREDVSQLRFTVMARDRGQPPKTDKATVIINIKDENDNVPNIDIRKIGRIFLKDGVANVAEDVIVDTPIALVQVSDRDKGPNGIVTCTV--VGDV-------PFQLKPASEVEGDMNKK--KYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPPVFSKSTVEVSFPENNAPGERVVTVVALDADSGKNAEISYSLDSS-----VNGIFSIDADTGDIRVNTILDR-EQTERYEFKVIAKDKGMPVLQGSATVVVLVADKNDNEPKFMQDVF---TFYIQENLQPNSPVGMITVMDADKGQN-------ADMSLYIEEEENIFSIDNNTGTIFSNMAFDREQRNNYSFRVKAVDGGDPPRSATATVSLSVMDVNDNPPTVLFPMNNSYTLLPPSSNIRTVVRTVSATDTDTGVNANLSYRIVGGNPFKLFDMDAWTGVISLVGKLEQKHFGLHRLVVQVNDSGVPSQSTTTL 805
BLAST of Protocadherin 11 vs. Ensembl Xenopus
Match: ENSXETT00000027070.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:3:19099783:19110965:-1 gene:ENSXETG00000013163.1 transcript:ENSXETT00000027070.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 249.98 bits (637), Expect = 1.438e-68 Identity = 230/828 (27.78%), Postives = 389/828 (46.98%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCD-KSNCILQMSAFINAQT-WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP--LLDLFELMYTPPRSL-KLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQII-ENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEI---------DVFGNLKLMKPLDRE-LRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLY--ENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYVLK---MMASDNGRPPKHSKDATLYIKVY-------------------SSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAII 2541
++EE +G +IG+I D L + + L+ + F + S + K + + E+ DL+V+ R+DRE LC + NC L + A + + + + +EI D+NDNSP F + F + E + +G L A D D+G NS+ SY L + E + T R +LVL +D EKK++ + + A D G + I + D+NDN P+F K V + E+ + V + D DEG N +++ N PEN A+ F++ NG + + L+ ++ + + + A+D G L S CKL+ V D+N++AP I++ + II E++ T +AL+ + D D G NG+V ++S + F ++ + + +KL+ LDRE S N++I D G P + K+I + + DVN+ P I E+ P +SF +V ATD D + N K+ + D +I V G L + D E LR F+ + D P T + + + ++D+NDN P + E + Y EN S+ ++ +D D NGKV ++++ I D + +N G +++ R D E E ++++ D GSPS S + + + D+NDN P +PS ++ S+ S + + V A D DS NA +S+ L+ P +L + TG + +L E + + +M DNG P S TL + V SSN+ F+ L++++A ++ + ++LVA+I
Sbjct: 38 IYEEQRLGYVIGNIAND--LGVSAEELSSRK-FHIVSRSK-KQYLNVHLENGDLYVADRIDREALCGMQQNCFLNIEAVMESPLHFYTINVEIQDVNDNSPSFSKSIFEISISELAVVGTHFALGSAKDPDLGNNSIQSYKLSANDYFGMLEKVNTDGRKYPELVLEKTLDREKKNSSVLI--LSAFDGGTPSKTGTSLIRIVVTDINDNYPLFNKDTYRVTVSENVPIGFLVIDLHATDADEGSNAEITYLFNDIPEN--AQEVFAINPENGSVQITGKLD-YEVATNYEMTVEAKDGGG--LVSYCKLLIQVSDVNDNAPDILIT----SFSDIIPEDSRVGTVIALVNLDDLDSGENGEVVGQISESLPFHLISS---SGNYYKLVTSMDLDREKTSEYNITIKAEDKGSPQLTNSKTIRLILTDVNDNAPVFDKMDYVAYIQENNPSGNSFYRVHATDPDINENGKVVYMILTDIIEDIPISSYVSINTVSGVLYAQRSFDYEKLREFY---IQAEDKGSPQ-LTNNKTIRLILTDVNDNAP-VFEKMDYVAYIQENNPSGSSFFRVHATDSDINENGKVVYMILTD-IIEDMPLSSYISINTVSGVLYAQRSFDYESLREFYIQVMAKDSGSPSRSANATVKICITDQNDNAPKILYPSQDSEA--ASVFEFIPHFSTKGYLVTKVVAVDADSGHNAWLSYHLLQVPD---PSFLI-IGQNTGEIRITRDLQETDALRQRIVVMVKDNGY-PMLSSTVTLNLVVAENFQQVLPEITNQHIDTESSSNATFY-----------LVISIALISILFIFTVLVAVI 823
BLAST of Protocadherin 11 vs. Ensembl Xenopus
Match: ENSXETT00000047801.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 243.817 bits (621), Expect = 7.066e-66 Identity = 233/849 (27.44%), Postives = 393/849 (46.29%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSS-RLDREQLCD----KSNCILQMSAFI---NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFH-LAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT--LISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG----LYVLKMMASDNGRP-PKHS-KDATLYIKVYSSNSGF----------------FFGGE----TDRLSLTLIVALASVTCIICVSLLVAIIIVRRH-RYSSIQYS 2580
V EE+P +IG+++KD L + + Q F + +I+++ + ++F +S R+DRE+LC ++ C ++ + +K+ I DINDNSP F T + EN+ + +P A D D+G N + Y L ++F L + TP + +L+++ +D E+K ++ ++K D G S L +++ DVNDNRP+F + + V I ED + +V Q+ D D G N ++ F + N LA+R+F++ + G I +++ L+ + P +H L + A D + P S + N+ DIN++ PSI I+ P G Q+ E T +ALI VTD D NGKV C + F + ++ + F L PLD E + IV D+G P + + I + D N+ P + E+ P + K+ ATD D N +L+ L + F +D G L ++ LDRE + + V+ DN P S T+ + +++ D NDN P +F++ ENL T+G + V+D DSG N V L++A +D F ++ G I DRE ++ D+GSP S K+ + V D NDN+P++ PS N +++ + ++ S + V A D D+ NA++ + +I LF + +GN+ +L G LY L + +D+G+P P H+ L++ +N + F GE T+ +I +A +I V + A++ R+ R+ +Q S
Sbjct: 50 VREELPENVLIGNLLKDLNLTLDPDLSTPLQ-FKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDT--YVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITN-LAKRHFAIDNNTGLITVKEPLDREESP--YHKLTVLASDGSSTP--SRATVTINITDINDNIPSIDTRYIINPVNGT-VQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPVFD---NQFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNP-SLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNA--------RDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPS---NNYSYDLVQTSTSPG---SVVARVYAIDNDTGINADLRYSIIGGNSRG----LFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSGKPEPFHTIAFVHLFVNETITNGSYIQELVRKSKETAVGEDFRDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKS 867
BLAST of Protocadherin 11 vs. Ensembl Xenopus
Match: ENSXETT00000047798.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 243.432 bits (620), Expect = 7.184e-66 Identity = 233/849 (27.44%), Postives = 393/849 (46.29%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSS-RLDREQLCD----KSNCILQMSAFI---NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFH-LAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT--LISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG----LYVLKMMASDNGRP-PKHS-KDATLYIKVYSSNSGF----------------FFGGE----TDRLSLTLIVALASVTCIICVSLLVAIIIVRRH-RYSSIQYS 2580
V EE+P +IG+++KD L + + Q F + +I+++ + ++F +S R+DRE+LC ++ C ++ + +K+ I DINDNSP F T + EN+ + +P A D D+G N + Y L ++F L + TP + +L+++ +D E+K ++ ++K D G S L +++ DVNDNRP+F + + V I ED + +V Q+ D D G N ++ F + N LA+R+F++ + G I +++ L+ + P +H L + A D + P S + N+ DIN++ PSI I+ P G Q+ E T +ALI VTD D NGKV C + F + ++ + F L PLD E + IV D+G P + + I + D N+ P + E+ P + K+ ATD D N +L+ L + F +D G L ++ LDRE + + V+ DN P S T+ + +++ D NDN P +F++ ENL T+G + V+D DSG N V L++A +D F ++ G I DRE ++ D+GSP S K+ + V D NDN+P++ PS N +++ + ++ S + V A D D+ NA++ + +I LF + +GN+ +L G LY L + +D+G+P P H+ L++ +N + F GE T+ +I +A +I V + A++ R+ R+ +Q S
Sbjct: 30 VREELPENVLIGNLLKDLNLTLDPDLSTPLQ-FKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDT--YVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITN-LAKRHFAIDNNTGLITVKEPLDREESP--YHKLTVLASDGSSTP--SRATVTINITDINDNIPSIDTRYIINPVNGT-VQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPVFD---NQFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNP-SLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNA--------RDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPS---NNYSYDLVQTSTSPG---SVVARVYAIDNDTGINADLRYSIIGGNSRG----LFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSGKPEPFHTIAFVHLFVNETITNGSYIQELVRKSKETAVGEDFRDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKS 847
BLAST of Protocadherin 11 vs. Ensembl Xenopus
Match: ENSXETT00000047804.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 243.432 bits (620), Expect = 7.198e-66 Identity = 232/849 (27.33%), Postives = 393/849 (46.29%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSS-RLDREQLCD----KSNCILQMSAFI---NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFH-LAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDG--FFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG----LYVLKMMASDNGRP-PKHS-KDATLYIKVYSSNSGF----------------FFGGE----TDRLSLTLIVALASVTCIICVSLLVAIIIVRRH-RYSSIQYS 2580
V EE+P +IG+++KD L + + Q F + +I+++ + ++F +S R+DRE+LC ++ C ++ + +K+ I DINDNSP F T + EN+ + +P A D D+G N + Y L ++F L + TP + +L+++ +D E+K ++ ++K D G S L +++ DVNDNRP+F + + V I ED + +V Q+ D D G N ++ F + N LA+R+F++ + G I +++ L+ + P +H L + A D + P S + N+ DIN++ PSI I+ P G Q+ E T +ALI VTD D NGKV C + F + ++ + F L PLD E + IV D+G P + + I + D N+ P + E+ P + K+ ATD D N +L+ + + F +D G L ++ LDRE + + V+ DN P S T+ + +++ D NDN P +F++ ENL T+G + V+D DSG N V L++A +D F ++ G I DRE ++ D+GSP S K+ + V D NDN+P++ PS N +++ + ++ S + V A D D+ NA++ + +I LF + +GN+ +L G LY L + +D+G+P P H+ L++ +N + F GE T+ +I +A +I V + A++ R+ R+ +Q S
Sbjct: 50 VREELPENVLIGNLLKDLNLTLDPDLSTPLQ-FKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDT--YVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITN-LAKRHFAIDNNTGLITVKEPLDREESP--YHKLTVLASDGSSTP--SRATVTINITDINDNIPSIDTRYIINPVNGT-VQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPVFD---NQFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNP-SLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNA--------RDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPS---NNYSYDLVQTSTSPG---SVVARVYAIDNDTGINADLRYSIIGGNSRG----LFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSGKPEPFHTIAFVHLFVNETITNGSYIQELVRKSKETAVGEDFRDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKS 867
BLAST of Protocadherin 11 vs. Ensembl Xenopus
Match: ENSXETT00000027046.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:3:19129014:19145839:-1 gene:ENSXETG00000013174.1 transcript:ENSXETT00000027046.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 236.884 bits (603), Expect = 6.561e-65 Identity = 221/741 (29.82%), Postives = 348/741 (46.96%), Query Frame = 1
Query: 106 ILTLMKLFIXXXXXXXXXXXXXXXVFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCD-KSNCILQMSAFI-NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP--LLDLFELMYT-PPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKL---------MKPLDRE-LRPFHPLVVLVTDNSPP-NSRTTSLALNITISDINDNIPKLLEPTS----FHLYENLNGNSTIGQLKVS----DPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVAD------ENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANIS 2238
I ++ +FI + + YSV+EE+ G IIG+I D L+I + K F + SHD+ K I + ++ DLFV R+DRE LC + CIL + A I N + +EI DINDN P F SF VE E + G L A D D+G NSV SY L L E + + +LVL +D EK+S+ + D G + ++ I ++D NDN P+F + V I ED + V Q+ D D+G N ++++ +H PEN AR+ F++ G+I L+ ++ ++ + + ARD G L S CK+ VID N++AP I + I E+ T +A+ D D G NGKV C++S F ++ T + +K++ +DRE + N+ I +D G P + K+I +++ DVN++ P + IPE+ +S + A D D + N ++ N +I + ++ + + D E +R F V+ V SPP NS TT + + I+D NDN P++L P+S LYE + +S G L D DSG N + + L+ A F + + G I R +S + +++ D G P+LS + L +A+ E +N+PI D N F+F + + A +S+ FI+ V + AN S
Sbjct: 13 IWDMVHIFILCIFYKMIYGQIQYSVYEELKPGSIIGNIANDLNLSINELSVRK---FHIASHDR-KQFISVNLDNGDLFVRERIDRETLCGLEPQCILDLKAMIENPLQIFTIKVEINDINDNEPSFSKKSFEVEVSEFAVPGARFALDYAQDPDLGTNSVQSYGLSANKYFSLGERTSSDGSKYPELVLEKHLDREKQSS--LELSLIPSDGGSPKKTCTASVKIVVHDANDNYPVFTQDTYVVNINEDAPNSFLVLQLQAADEDDGTNAQITYSFSHIPEN--ARQIFTINPQTGEIRKTGHLD-YEVTKRYTITVEARDGGG--LVSPCKVSIQVIDANDNAPEIQIS---SYSATIPEDAPTQTVIAIFNTYDMDSGENGKVVCQISEELPFQLI---SLTENYYKIMTSSRMDREETAEYNIEITAKDKGSPPLYSNKTIQVTLTDVNDHIPTFEKSNYIAYIPENNQPGTSVLSIKAFDHDINENGQILYSIMNKDIQDIPISSHISINSATGVIYALHAFDYEKIREFQFQVMAVDSGSPPLNSNTT---ITVCITDKNDNAPEILYPSSDTEGTALYEFIPHSSDRGYLVTKVIAVDADSGHNAWLSYHLLQAQE------PSVFTIGQSTGEIRLARGFQETDSSRQKVVVMVKDNGEPTLSATVTLNLIIAENFQVLPEINNKPIKL---DNPNNFSFYLVIAIAVISLL--FILTVVGTVISKCRKANTS 722 HSP 2 Score: 97.4413 bits (241), Expect = 6.447e-20 Identity = 116/441 (26.30%), Postives = 201/441 (45.58%), Query Frame = 1
Query: 1108 DINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTF-KLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL----ISDN-DGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL-LEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPV-YLFTLELMTGNL-GTNGELSEGL--YVLKMMASDNGRPPKHS 2394
DIN++ PS K + ++ E + AL D D G N + LS YF + ER S + +L+++K LDRE SS+ +S++ D G P K+ S+ I V D N+ P + I ED P + ++ A D+D N ++T I +N F I+ G ++ LD E+ + + V D + ++I + D NDN P++ + S + E+ + I D DSG NGKV I+++L + E+ I + +DRE T+E + I D+GSP L + I + + D ND+ P + +++N + ++ SV ++++A D D EN I + +++ +IP+ ++ TG + + E + + ++MA D+G PP +S
Sbjct: 127 DINDNEPSFSKK---SFEVEVSEFAVPGARFALDYAQDPDLGTNSVQSYGLSANKYFSLGERTSSDGSKYPELVLEKHLDREKQSSLELSLIPSDGGSPKKTCTASVKIVVHDANDNYPVFTQDTYVVNINEDAPNSFLVLQLQAADEDDGTNAQITYSFSHIPENARQIFTINPQTGEIRKTGHLDYEVTKRYTITVEARDGG---GLVSPCKVSIQVIDANDNAPEIQISSYSATIPEDAPTQTVIAIFNTYDMDSGENGKV------VCQISEELPFQLISLTENYYKIMTSSRMDREETAEYNIEITAKDKGSPPLYSNKTIQVTLTDVNDHIPTF----EKSNYIAYIPENNQPGTSV-----LSIKAFDHDINENGQILYSIMNKDIQDIPISSHISINSATGVIYALHAFDYEKIREFQFQVMAVDSGSPPLNS 546
BLAST of Protocadherin 11 vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 249.98 bits (637), Expect = 4.120e-68 Identity = 219/786 (27.86%), Postives = 359/786 (45.67%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVS-SRLDREQLCDKSN------CILQMSAFI------NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP---LLDLFELMYTPPRSLK---LVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK---LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND----GFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVY 2424
V EE P +IG + D L + L+ + + +++ ++ D+F + + +DRE L + N CIL+ I + ++ IE+ DINDN+P F + EN+ IG +PLATD D GPN V SY L+ +LF L + K L++ G +D E+ + Y LT +K D G S L +++ D NDN P F + + E++ + +V QV D D+G N + + + PE + RR + G I ++ ++ D+ ++ A+D GA P S+ +++ V D+N++AP+I ++ +G I E+ T VAL+ V+D D+G N V C ++ F + + E S + K L PLD E + + IV D+G P S+ S+ + V+DVN+ P + PE+ A+V A+D D +N +L + + G F I G +++ LDRE R + L V+ D P+ + T+ L + + D NDN PK +L +F + EN+ S +G + V D D G N +V+ + + F + GTI S DRE S ++ D G P S + + V DENDN P T PS+ +++ + + RL + V A D DS NA +++ + P LF + +G + E+ GL+ L + SD G+PP++ T + +Y
Sbjct: 42 VPEEQPPNTLIGSLAADYGLP------DVGHLYKL---EVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERW-DSYDLT-IKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPE--VVRRLLRLDRNTGLITVQGPVDREDL-STLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIR-GIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVL-VNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSV--------EQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHR----LLTPQTRLG---ETVSQVTAEDIDSGINAELTYSIAGGN----PYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRY---GTALVHLY 789
BLAST of Protocadherin 11 vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 249.98 bits (637), Expect = 4.120e-68 Identity = 219/786 (27.86%), Postives = 359/786 (45.67%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVS-SRLDREQLCDKSN------CILQMSAFI------NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP---LLDLFELMYTPPRSLK---LVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK---LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND----GFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVY 2424
V EE P +IG + D L + L+ + + +++ ++ D+F + + +DRE L + N CIL+ I + ++ IE+ DINDN+P F + EN+ IG +PLATD D GPN V SY L+ +LF L + K L++ G +D E+ + Y LT +K D G S L +++ D NDN P F + + E++ + +V QV D D+G N + + + PE + RR + G I ++ ++ D+ ++ A+D GA P S+ +++ V D+N++AP+I ++ +G I E+ T VAL+ V+D D+G N V C ++ F + + E S + K L PLD E + + IV D+G P S+ S+ + V+DVN+ P + PE+ A+V A+D D +N +L + + G F I G +++ LDRE R + L V+ D P+ + T+ L + + D NDN PK +L +F + EN+ S +G + V D D G N +V+ + + F + GTI S DRE S ++ D G P S + + V DENDN P T PS+ +++ + + RL + V A D DS NA +++ + P LF + +G + E+ GL+ L + SD G+PP++ T + +Y
Sbjct: 42 VPEEQPPNTLIGSLAADYGLP------DVGHLYKL---EVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERW-DSYDLT-IKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPE--VVRRLLRLDRNTGLITVQGPVDREDL-STLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIR-GIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVL-VNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSV--------EQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHR----LLTPQTRLG---ETVSQVTAEDIDSGINAELTYSIAGGN----PYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRY---GTALVHLY 789
BLAST of Protocadherin 11 vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 235.343 bits (599), Expect = 3.500e-63 Identity = 195/679 (28.72%), Postives = 314/679 (46.24%), Query Frame = 1
Query: 460 NDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP---LLDLFELMYTPPRSLK---LVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK---LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND----GFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVY 2424
NDN+P F + EN+ IG +PLATD D GPN V SY L+ +LF L + K L++ G +D E+ + Y LT +K D G S L +++ D NDN P F + + E++ + +V QV D D+G N + + + PE + RR + G I ++ ++ D+ ++ A+D GA P S+ +++ V D+N++AP+I ++ +G I E+ T VAL+ V+D D+G N V C ++ F + + E S + K L PLD E + + IV D+G P S+ S+ + V+DVN+ P + PE+ A+V A+D D +N +L + + G F I G +++ LDRE R + L V+ D P+ + T+ L + + D NDN PK +L +F + EN+ S +G + V D D G N +V+ + + F + GTI S DRE S ++ D G P S + + V DENDN P T PS+ +++ + + RL + V A D DS NA +++ + P LF + +G + E+ GL+ L + SD G+PP++ T + +Y
Sbjct: 1 NDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERW-DSYDLT-IKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPE--VVRRLLRLDRNTGLITVQGPVDREDL-STLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIR-GIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVL-VNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSV--------EQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHR----LLTPQTRLG---ETVSQVTAEDIDSGINAELTYSIAGGN----PYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRY---GTALVHLY 650 HSP 2 Score: 138.658 bits (348), Expect = 1.342e-32 Identity = 151/586 (25.77%), Postives = 247/586 (42.15%), Query Frame = 1
Query: 337 LFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEI--IDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLV-LRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRP--------IFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIP--DKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNS--SFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFH---LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSP 2037
L V LDRE+ D + +++ N + + +D NDN+PKFE ++ E ENS IG+S A D D G N+ YT ++ + R+ L+ ++G VD E S F V A D G ++ + +++ D+NDN P + + I ED V V V D DEGEN V+ + +L R+ S + Y ++ +D + + I A D G PLSS L V+D+N++AP T + EN VA + +D D G+N ++ L L + + ++ +K LDRE S + +V D G P ++ ++V+D N+ P + YN + E++P S VI DK +A ++L++ DN F + G + DRE + + + D P R+ + + I + D NDN P + P++ L T+ Q+ D DSG+N ++ Y+I F + G I + I+R L + ++D+G P
Sbjct: 71 LIVMGNLDRER-WDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRF--SVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQL-RQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSIT---EVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGL--FTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLS-GYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVP-PRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAEL------TYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKP 639 HSP 3 Score: 135.191 bits (339), Expect = 1.480e-31 Identity = 130/530 (24.53%), Postives = 230/530 (43.40%), Query Frame = 1
Query: 208 IGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGV---IQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTW-IKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLAT--------DIDIGPNSVHSYTLE-----PLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL-SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKV--EPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDND--GFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSL 1725
IGH + K G N D T H + V +++ + + V +DRE L +L ++ +V + + D+NDN+P E + +++ S+++ T D D G N+ + + L E + L +DYEK + + + A D+G L S +L + + DVNDN P+F + V E+ + + V +V D D G N + + + P A+ F++ NG+I ++ SL+ + D + L + A D G+ L ++ NV+D N++ P ++ G ++EN ++ V ++ V DGDKG N +V + + FVI + T ++ DRE S+ + D G+P +S ++I+V+D N+ P + S+ ++ + + ++V A D D N +LT I+ + G F+I G + L K ++R H LVV V+D P T+L
Sbjct: 134 IGHSVIQVKANDSDQGANA--EIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKD--YTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEP---AAQGLFTISPENGEIRVKTSLDR-EQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLS---GYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVI------QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTAL 646
BLAST of Protocadherin 11 vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 228.409 bits (581), Expect = 5.665e-61 Identity = 218/761 (28.65%), Postives = 352/761 (46.25%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLA-IGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVS-SRLDREQLCDKSNCILQMSAFINAQT---------WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDV---FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGE--LSE-GLYVLKMMASDNGRP 2382
V EE+P +IG ++KD L+ I L F + +I+I+ + ++F + +R+DRE+LC + +L F + +K+ I DINDN+P F T + ENS I LP A D DIG N V +Y L ++F L + TP + +L+++ ++D E+K ++ +VK D G Q S L +S+ D NDN PIF++ V I E+ + +V Q+ D D GEN R+ F ++ N +A+R F + + G I +++ L+ + P L + A D G+ P + ++ NV DIN++ PSI IV PT G + EN T +ALI V D D +NG+V C T + V S+ F L LD E + ++ D G P + + I V D N+ P +PE+ + K+ ATD D N +++ + D E ++ G L +K LDRE + + VL DN P + + +T+ D NDN P +F++ E+L + T+G + V+DPD G N V ++ + D+F ++ G I DRE + D G S S ++ + V D NDN+PI+ P N F + + S+ + + V A D D NA + + ++ LF +E +GN+ + +S+ GL+ + + A+D G+P
Sbjct: 30 VREEMPENVLIGDLLKDLNLSLIPDKSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLC--AGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDT--YVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSN-IAKRLFHLNTTTGLITVKEPLDREESPSH-KLLVLATDGGSTP--ARATVLVNVTDINDNVPSIDIRYIVNPTNGT-VLLSENAPLNTKIALITVMDKDSEHNGRVTC---FTDHEVPFRLRPVFSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVF-VTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILD--------VNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPP-SNYSFEWVLPSTNPG-----TVVFKVVAIDDDIGMNAEVLYSIVGGNTKG----LFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLGQP 759 HSP 2 Score: 145.206 bits (365), Expect = 1.120e-34 Identity = 146/475 (30.74%), Postives = 220/475 (46.32%), Query Frame = 1
Query: 1084 CKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDN------DGFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL-----LEPT--SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWT-----FPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
K+ F + DIN++AP + PT I EN+ + +L D D G NG N +L + L+ E +LI++K LDRE + + + D G P +S+ + +SV D N+ P +E V IPE+ P+ SS ++ ATD D N ++ N F ++ G + + +PLDRE P H L+VL TD +R T L + ++DINDN+P + + PT + L EN N+ I + V D DS NG+V H + + F+ E + D E T E +++L D G P L+ +++KV DENDN P++T ENN S A+L+ + A+D DS +NA IS+ L F D P F L+ TG L +L + Y ++A DNG PP S +AT+++ V N
Sbjct: 123 VKIRFLIEDINDNAP---LFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF-IEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKLLVLATDGGSTPARATVL---VNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAFL------DFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENN-------SPGAQLT-------KISATDADSGQNAEISYML--GF-DAPPE--FNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMS-NATVFVTVLDQN 564
BLAST of Protocadherin 11 vs. Ensembl Mouse
Match: Pcdhgb5 (protocadherin gamma subfamily B, 5 [Source:MGI Symbol;Acc:MGI:1935196]) HSP 1 Score: 226.868 bits (577), Expect = 6.678e-61 Identity = 195/657 (29.68%), Postives = 320/657 (48.71%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKS-NCILQMSAFI-NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLK----LVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLT---LISDND-----GFFEIDV-FGNLKLMKPLDRE-LRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL----LEPTSFHLYENLNGNSTIGQLKVS----DPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVAD 2079
EE+P G ++G++ KD ++ K ++ K + ES +L VSSRLDREQ+C K C L+ A N + V +E+ DIND++P F +T ++ E++Q G L +A D DI NS+ +Y L P F L+ + + LVL +D E+++ Y+ + A D G+ L L I + D NDN P+F + VR+ E+ TV +V D DEG N +S+ + A + F + S +G+I +K+L+ +I ++ + + ARD G L ++C + N+ D N++ P I V+ L I EN T +ALI + DGD G NG+VNC L + F I+ + +++KL+ + LDREL NV+I D G P S+ +++ V DVN+ P + SY V I E+ P +S A+V A+D D +N ++ + SD + + ++ G + + D E LR F L + D+ P + + ++++ + + D NDN P++ LEP L++ + + G L D DSG N +L H +D + F + G + + R + + + L + + D G P LS ++L AD
Sbjct: 39 EEMPTGSVVGNLAKDLGFSVQELPTRKLRI------SSEKPYFSVSSESGELLVSSRLDREQICGKKLVCALEFEAVAENPLNFYHVSVELEDINDHTPNFTHTFSELQISESAQPGTRFILEVAEDADIALNSLQNYKLSPSPG-FSLVNKEKQDGRKYPELVLEKTLDREQQN--YYRLVLTALDGGDPPLSGTTELRIQVTDANDNPPVFNQEVYKVRLPENVPPGTTVLRVTATDKDEGVNSEISYSFHR------AGQVFGLNSKSGEIITQKTLDFEEI-KEYSIVVEARDGGG--LVAQCTVEINIQDENDNRPEITVRSLLE---MIPENAPPGTLIALIKIHDGDSGENGEVNCRLDDEVPFKIISS---SKNSYKLVTDRALDRELTPEYNVTITATDRGKPPLSSSTKVTLHVGDVNDNAPLFH-QASYLVYIAENNPPGASIAQVSASDPDLGSNGHVSYSIIASDLEPKSLWSYVTVNAQSGVVFAQRAFDHEQLRSFQ-LTLQARDHGSP-TLSANVSMRVLVGDRNDNAPRVLYPALEPDGSALFDMVPRAAQPGYLVTKVVAVDADSGHNA---WLSYHVLQASDPGL---FSLGLRTGEVRTARALGEKDAARQRLLVGVRDGGQPPLSATATLLLVFAD 662 HSP 2 Score: 173.711 bits (439), Expect = 1.107e-43 Identity = 180/661 (27.23%), Postives = 307/661 (46.44%), Query Frame = 1
Query: 643 SLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEI--DVFGNLKLM--KPLDRELRPFHPLVVLVTDNS-PPNSRTTSLALNITISDINDNIPKLLEPTSFHLY--ENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDE-NNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTN---GELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETD---------RLSLTLIVALASVTCIICVSLLVAIIIVRRHRYS 2565
S +L++ ++D E+ + + ++ E+ L + ++++ + D+ND+ P F ++I E Q + +D D N +++++ +P L + ++ L K+L+ + + + L +TA D G PLS +L V D N++ P + K ++ EN TTV + TD D+G VN E+S S+ + + S + ++I +K LD E + ++ + RD G V ++ I++ D N+ P + V +IPE+ P + A + D D N ++ D++ F+I + KL+ + LDREL P + + + TD PP S +T + L++ D+NDN P L S+ +Y EN ++I Q+ SDPD G NG V + +I A + K + VN G +F+ R D E L + D GSP+LS + + V D NDN P +P+ E + F + AA+ + V A D DS NA +S+ ++ A LF+L L TG + T GE L + D G+PP S ATL + V++ + +D L L+VALA V+ + +++++AI + RH S
Sbjct: 81 SGELLVSSRLDREQICGKKLVCALEFEAVAENPL-NFYHVSVELEDINDHTPNFTHTFSELQISESAQPGTRFILEVAEDADIALNSLQNYKLSPSPGFSLVNKEKQDGRKYPELVLEKTLDR-EQQNYYRLVLTALDGGDPPLSGTTELRIQVTDANDNPPVFNQEVY---KVRLPENVPPGTTVLRVTATDKDEG----VNSEIS-YSFHRAGQVFGLNSKSGEIITQKTLDFEEIKEYSIVVEARDGGGLVAQC--TVEINIQDENDNRPEITVRSLLEMIPENAPPGTLIALIKIHDGDSGENGEVNCRLDDEVPFKIISSSKNSYKLVTDRALDRELTPEYNVTITATDRGKPPLSSSTKVTLHV--GDVNDNAP-LFHQASYLVYIAENNPPGASIAQVSASDPDLGSNGHVSYSII-ASDLEPKSLWSYVTVNAQSGVVFAQRAFDHEQLRSFQLTLQARDHGSPTLSANVSMRVLVGDRNDNAPRVLYPALEPDGSALFDMVPRAAQPGY---LVTKVVAVDADSGHNAWLSYHVLQASDPG----LFSLGLRTGEVRTARALGEKDAARQRLLVGVRDGGQPPL-SATATLLL-VFADSLQEALPDLSDHSLPPDPQAELQFYLVVALALVSVLFLLAVILAIALRLRHSSS 716 HSP 3 Score: 120.168 bits (300), Expect = 5.339e-27 Identity = 130/476 (27.31%), Postives = 205/476 (43.07%), Query Frame = 1
Query: 907 VSFEINHTPENRL----ARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIF-----NVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTF-KLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDG--FFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLY-ENLNGNSTIGQLKVSDPDSGLNGKVK--------FLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPS-----DENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISA 2256
+ F + P +L + YFSV S +G++ + L+ I K + A + A+ +E L F + DIN+H P+ ++ QI E+ T L + D D N N +LS + F ++ + + + +L+++K LDRE + + + D G P S + I V D N+ PP E +PE++P ++ +V ATDKD N +++ G F G + K LD E + +VV D + I I D NDN P++ + + EN + I +K+ D DSG NG+V F +I + + KL+ D R +DRE+T E + I TD+G P LS K+ L V D NDN P++ S ENN SI+ V ASDPD N ++S+ +I++
Sbjct: 54 LGFSVQELPTRKLRISSEKPYFSVSSESGELLVSSRLDREQICGK--KLVCALEFEAV---AENPLNFYHVSVELEDINDHTPNFT---HTFSELQISESAQPGTRFILEVAEDADIALNSLQNYKLSPSPGFSLVNKEKQDGRKYPELVLEKTLDREQQNYYRLVLTALDGGDPPLSGTTELRIQVTDANDNPPVFNQEVYKVRLPENVPPGTTVLRVTATDKDEGVNSEISYSFHRAGQVFGLNSKSGEIITQKTLDFEEIKEYSIVVEARDG---GGLVAQCTVEINIQDENDNRPEITVRSLLEMIPENAPPGTLIALIKIHDGDSGENGEVNCRLDDEVPFKIISSSKNSYKLVTD--------------RALDRELTPEYNVTITATDRGKPPLSSSTKVTLHVGDVNDNAPLFHQASYLVYIAENNPPGASIA--------------QVSASDPDLGSNGHVSYSIIAS 490
BLAST of Protocadherin 11 vs. UniProt/SwissProt
Match: sp|Q08174|PCDH1_HUMAN (Protocadherin-1 OS=Homo sapiens OX=9606 GN=PCDH1 PE=1 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 1.619e-65 Identity = 209/742 (28.17%), Postives = 344/742 (46.36%), Query Frame = 1
Query: 310 IQIKPESCDLFVS-SRLDREQLCDKSN------CILQMSAFI------NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP---LLDLFELMYTPPRSLK---LVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK---LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND----GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVY 2424
+++ ++ D+F + + +DRE L + N CIL+ I + ++ IE+ DINDN+P F + EN+ IG +PLA+D D GPN V SY L+ +LF L + K L++ G +D E+ + Y LT +K D G S L +++ D NDN P F + + + E++ + +V QV D D+G N + + + PE + RR + G I ++ ++ D+ ++ A+D G P S+ +++ V D+N++AP+I ++ +G I E+ T VAL+ V+D D+G N V C ++ F + + E S + K L PLD E + + IV D+G P S+ S+ + V+DVN+ P + PE+ A++ A+D D +N +L + + G F I G +++ LDRE R + L V+ D P+ + T+ L + + D NDN PK +L +F + EN+ S +G + V D D G N +V+ + + F + GTI S DRE S ++ D G P S + + V DENDN P T PS+ +++ + + RL + V A D DS NA +LI + P LF + +G + E+ GL+ L + SD G+PP++ T + +Y
Sbjct: 99 LRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERW-DSYDLT-IKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPE--VVRRLLRLDRNTGLITVQGPVDREDL-STLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIR-GIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVL-VNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSV--------EQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHK----LLTPQTRLG---ETVSQVAAEDFDSGVNA----ELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRY---GTALVHLY 811 HSP 2 Score: 70.4774 bits (171), Expect = 8.081e-11 Identity = 72/302 (23.84%), Postives = 127/302 (42.05%), Query Frame = 1
Query: 211 GHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQ---------LCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRP-IFLKCNESVRIME-DTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFH----LAITARDHGAIP 1071
G +I + + +G N ++ + +KG+ I PE+ ++ V + LDREQ D+ + LQ +A V + ++D NDN PKF + + EN + D D G N+ ++E F + ++ + + ++++ + ++KA D G + + + I++ D NDN P I N S +++ T+L +TV QV +D D G N + + I L F + S +G I L K +I + H L + D G P
Sbjct: 522 GEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTA--------TVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDFVI-----QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGL----FQIGSHSGAITLEK-----EIERRHHGLHRLVVKVSDRGKPP 801
BLAST of Protocadherin 11 vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 3.060e-62 Identity = 217/759 (28.59%), Postives = 356/759 (46.90%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSN-GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVS-SRLDREQLCD----KSNCILQMSAFINAQT---WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGN--LGTNGELSE-GLYVLKMMASDNGRP 2382
+ EE+P +IG ++KD L++ N L F + +I+I+ ++ ++F + +R+DRE+LC +C ++ I +K+ I DINDN+P F T + ENS I LP A D D+G N V +Y L ++F L + TP + +L+++ ++D E+K ++ +VK D G Q S L +S+ D NDN P+F + V I E+ + +V Q+ D D GEN ++ F ++ N +ARR F + + G I +++ L+ + P+ L + A D G +P + ++ NV D+N++ PSI IV P + + + EN T +ALI VTD D +NG+V C T + + S+ F L LD E + ++ D G P + + I V D N+ P IPE+ KV ATD D P+A + L D F +D G L ++K LDRE + +L DN P T+++ + ++I D NDN P +F++ ENL + T+G + V+DPD G N V ++ D F ++ G I DRE + D G S S K+ + V D NDN+P++ P N + + S+ + + V A D D+ NA + + ++ + LF ++ TGN L ++++ GL+ + + A+D G+P
Sbjct: 30 IREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDT--YVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSN-IARRLFHLNATTGLITIKEPLDREETPNH-KLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP-VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC---FTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVP-PLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDE--------NDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPP-SNYSYELVLPSTNPG-----TVVFQVMAVDNDTGMNAEVRYSIVGGNTRD----LFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759 HSP 2 Score: 139.043 bits (349), Expect = 7.573e-32 Identity = 136/473 (28.75%), Postives = 213/473 (45.03%), Query Frame = 1
Query: 1087 KLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDN------DGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-----LLEPT--SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRES-----FIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
K+ F + DIN++AP + P I EN+ + L D D G NG N EL + L+ E +LI++K LDRE + + + D G P +S+ + +SV D N+ P K IPE+ PV +S ++ ATD D N K+ N F ++ G + + +PLDRE P H L+VL +D +R L + ++D+NDN+P ++ P + L EN+ N+ I + V+D D+ NG+V H + + F+ E +D E T E +++L D G P L+ + +KV DENDN P++T S +S+ E+ + V A+D DS NA I++ L D P F+L+ TG L +L E Y+ ++A DNG PP S + T+++ + N
Sbjct: 124 KIRFLIEDINDNAP---LFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVL---VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLETAAY------LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFT--------------QSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLL---GPDAPPE--FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTS-NVTVFVSIIDQN 564 HSP 3 Score: 107.071 bits (266), Expect = 4.987e-22 Identity = 135/541 (24.95%), Postives = 235/541 (43.44%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDI----GPNSVHSYTLEPLLDL---FELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKK--PLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPS-YN---VIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDND-GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISD 1749
E PVG + + + IG N ++ S + ++ + + + + + LDRE+ + +L + + V + + D+NDN P + V N + S+ +PL T I + ++ H+ + D F L L +DYE S + + ++ A DAG+ L L I + D NDN P+F + +V I E+ + +V D D G N +++ + + PE L RR G + + K L+ + DK+ I A+D+G PL+S + ++ID N+++P + EN TV LI VTD D G+N V ++ E +FT + +I+ DRE S + D G +S+ ++I+V+DVN+ P V PS Y+ V+P P F +V+A D D +A ++ +++ N F ID GN+ LM+ D H ++V D P+S + + +N+ +++
Sbjct: 260 ENAPVGTSVTQL-HATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAM-VLVNVTDVNDNVPSIDIRYIVNPV--NDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLETAAYLDYE--STKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRR-------TGMLTVVKKLDR-EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHN---EYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLS-------ILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVF-QVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNE 774
BLAST of Protocadherin 11 vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 3.372e-62 Identity = 217/759 (28.59%), Postives = 356/759 (46.90%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSN-GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVS-SRLDREQLCD----KSNCILQMSAFINAQT---WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGN--LGTNGELSE-GLYVLKMMASDNGRP 2382
+ EE+P +IG ++KD L++ N L F + +I+I+ ++ ++F + +R+DRE+LC +C ++ I +K+ I DINDN+P F T + ENS I LP A D D+G N V +Y L ++F L + TP + +L+++ ++D E+K ++ +VK D G Q S L +S+ D NDN P+F + V I E+ + +V Q+ D D GEN ++ F ++ N +ARR F + + G I +++ L+ + P+ L + A D G +P + ++ NV D+N++ PSI IV P + + + EN T +ALI VTD D +NG+V C T + + S+ F L LD E + ++ D G P + + I V D N+ P IPE+ KV ATD D P+A + L D F +D G L ++K LDRE + +L DN P T+++ + ++I D NDN P +F++ ENL + T+G + V+DPD G N V ++ D F ++ G I DRE + D G S S K+ + V D NDN+P++ P N + + S+ + + V A D D+ NA + + ++ + LF ++ TGN L ++++ GL+ + + A+D G+P
Sbjct: 30 IREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDT--YVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSN-IARRLFHLNATTGLITIKEPLDREETPNH-KLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP-VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC---FTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVP-PLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDE--------NDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPP-SNYSYELVLPSTNPG-----TVVFQVMAVDNDTGMNAEVRYSIVGGNTRD----LFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759 HSP 2 Score: 139.043 bits (349), Expect = 8.318e-32 Identity = 136/473 (28.75%), Postives = 213/473 (45.03%), Query Frame = 1
Query: 1087 KLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDN------DGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-----LLEPT--SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRES-----FIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
K+ F + DIN++AP + P I EN+ + L D D G NG N EL + L+ E +LI++K LDRE + + + D G P +S+ + +SV D N+ P K IPE+ PV +S ++ ATD D N K+ N F ++ G + + +PLDRE P H L+VL +D +R L + ++D+NDN+P ++ P + L EN+ N+ I + V+D D+ NG+V H + + F+ E +D E T E +++L D G P L+ + +KV DENDN P++T S +S+ E+ + V A+D DS NA I++ L D P F+L+ TG L +L E Y+ ++A DNG PP S + T+++ + N
Sbjct: 124 KIRFLIEDINDNAP---LFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVL---VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLETAAY------LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFT--------------QSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLL---GPDAPPE--FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTS-NVTVFVSIIDQN 564 HSP 3 Score: 107.071 bits (266), Expect = 5.384e-22 Identity = 135/541 (24.95%), Postives = 235/541 (43.44%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDI----GPNSVHSYTLEPLLDL---FELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKK--PLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPS-YN---VIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDND-GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISD 1749
E PVG + + + IG N ++ S + ++ + + + + + LDRE+ + +L + + V + + D+NDN P + V N + S+ +PL T I + ++ H+ + D F L L +DYE S + + ++ A DAG+ L L I + D NDN P+F + +V I E+ + +V D D G N +++ + + PE L RR G + + K L+ + DK+ I A+D+G PL+S + ++ID N+++P + EN TV LI VTD D G+N V ++ E +FT + +I+ DRE S + D G +S+ ++I+V+DVN+ P V PS Y+ V+P P F +V+A D D +A ++ +++ N F ID GN+ LM+ D H ++V D P+S + + +N+ +++
Sbjct: 260 ENAPVGTSVTQL-HATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAM-VLVNVTDVNDNVPSIDIRYIVNPV--NDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLETAAYLDYE--STKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRR-------TGMLTVVKKLDR-EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHN---EYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLS-------ILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVF-QVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNE 774
BLAST of Protocadherin 11 vs. UniProt/SwissProt
Match: sp|Q6X862|PC11X_GORGO (Protocadherin-11 X-linked OS=Gorilla gorilla gorilla OX=9595 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 3.463e-62 Identity = 218/759 (28.72%), Postives = 356/759 (46.90%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSN-GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVS-SRLDREQLCD----KSNCILQMSAFINAQT---WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGN--LGTNGELSE-GLYVLKMMASDNGRP 2382
+ EE+P +IG ++KD L++ N L F + +I+I+ ++ ++F + +R+DRE+LC +C ++ I +K+ I DINDN+P F T + ENS I LP A D D+G N V +Y L ++F L + TP + +L+++ ++D EKK ++ +VK D G Q S L +S+ D NDN P+F + V I E+ + +V Q+ D D GEN ++ F ++ N +ARR F + + G I +++ L+ + P+ L + A D G +P + ++ NV D+N++ PSI IV P + + + EN T +ALI VTD D +NG+V C T + + S+ F L LD E + ++ D G P + + I V D N+ P IPE+ KV ATD D P+A + L D F +D G L ++K LDRE + +L DN P T+++ + ++I D NDN P +F++ ENL + T+G + V+DPD G N V ++ D F ++ G I DRE + D G S S K+ + V D NDN+P++ P N + + S+ + + V A D D+ NA + + ++ + LF ++ TGN L ++++ GL+ + + A+D G+P
Sbjct: 30 IREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNMFGLDVIETPEGDKMPQLIVQKELDREKKDT--YVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSN-IARRLFHLNATTGLITIKEPLDREETPNH-KLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP-VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC---FTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVP-PLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDE--------NDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPP-SNYSYELVLPSTNPG-----TVVFQVIAVDNDTGMNAEVRYSIVGGNTRD----LFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759 HSP 2 Score: 138.658 bits (348), Expect = 1.190e-31 Identity = 136/473 (28.75%), Postives = 213/473 (45.03%), Query Frame = 1
Query: 1087 KLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDN------DGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-----LLEPT--SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRES-----FIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
K+ F + DIN++AP + P I EN+ + L D D G NG N EL + L+ E +LI++K LDRE + + + D G P +S+ + +SV D N+ P K IPE+ PV +S ++ ATD D N K+ N F ++ G + + +PLDRE P H L+VL +D +R L + ++D+NDN+P ++ P + L EN+ N+ I + V+D D+ NG+V H + + F+ E +D E T E +++L D G P L+ + +KV DENDN P++T S +S+ E+ + V A+D DS NA I++ L D P F+L+ TG L +L E Y+ ++A DNG PP S + T+++ + N
Sbjct: 124 KIRFLIEDINDNAP---LFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNMFGLDVIETPEGDKMPQLIVQKELDREKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVL---VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLETAAY------LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFT--------------QSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLL---GPDAPPE--FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTS-NVTVFVSIIDQN 564 HSP 3 Score: 108.227 bits (269), Expect = 2.225e-22 Identity = 128/484 (26.45%), Postives = 214/484 (44.21%), Query Frame = 1
Query: 355 LDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDI----GPNSVHSYTLEPLLDL---FELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKK--PLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPS-YN---VIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDND-GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISD 1749
LDRE+ + +L + + V + + D+NDN P + V N + S+ +PL T I + ++ H+ + D F L L +DYE S + + ++ A DAG+ L L I + D NDN P+F + +V I E+ + +V D D G N +++ + + PE L RR G + + K L+ + DK+ I A+D+G PL+S + ++ID N+++P + EN TV LI VTD D G+N V ++ E +FT + +I+ DRE S + D G +S+ ++I+V+DVN+ P V PS Y+ V+P P F +VIA D D +A ++ +++ N F ID GN+ LM+ D H ++V D P+S + + +N+ +++
Sbjct: 315 LDREETPNHKLLVLASDGGLMPARAM-VLVNVTDVNDNVPSIDIRYIVNPV--NDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLETAAYLDYE--STKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRR-------TGMLTVVKKLDR-EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHN---EYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLS-------ILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVF-QVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNE 774
BLAST of Protocadherin 11 vs. UniProt/SwissProt
Match: sp|Q9BZA8|PC11Y_HUMAN (Protocadherin-11 Y-linked OS=Homo sapiens OX=9606 GN=PCDH11Y PE=1 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 3.583e-61 Identity = 217/759 (28.59%), Postives = 356/759 (46.90%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSN-GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVS-SRLDREQLCD----KSNCILQMSAFINAQT---WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFEL--MYTPP--RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGN--LGTNGELSE-GLYVLKMMASDNGRP 2382
+ EE+P +IG+++KD L++ N L F + +I+I+ ++ ++F + +R+DRE+LC +C ++ I +K+ I DINDN+P F T + ENS I LP A D D+G N V +Y L ++F L + TP + +L+++ ++D E+K ++ +VK D G Q S L +S+ D NDN P+F + V I E+ + +V Q+ D D GEN ++ F ++ N +ARR F + + G I +++ L+ + P+ L + A D G +P + ++ NV D+N++ PSI IV P + + + EN T +ALI VTD D +NG+V C T + + S+ F L LD E + ++ D G P + + I V D N+ P IPE+ KV ATD D P+A + L D F +D G L ++K LDRE + +L DN P T+++ + ++I D NDN P F++ ENL + T+G + V+DPD G N V ++ D F ++ G I DRE + D G S S K+ + V D NDN+P++ P N + + S+ + + V A D D+ NA + + ++ + LF ++ TGN L ++++ GL+ + + A+D G+P
Sbjct: 62 IREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDT--YVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSN-IARRLFHLNATTGLITIKEPLDREETPNH-KLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP-VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC---FTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVP-PLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDE--------NDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPP-YNYSYELVLPSTNPG-----TVVFQVIAVDNDTGMNAEVRYSIVGGNTRD----LFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 791 HSP 2 Score: 139.043 bits (349), Expect = 7.670e-32 Identity = 136/473 (28.75%), Postives = 215/473 (45.45%), Query Frame = 1
Query: 1087 KLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDN------DGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-----LLEPT--SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRES-----FIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
K+ F + DIN++AP + P I EN+ + L D D G NG N EL + L+ E +LI++K LDRE + + + D G P +S+ + +SV D N+ P K IPE+ PV +S ++ ATD D N K+ N F ++ G + + +PLDRE P H L+VL +D +R L + ++D+NDN+P ++ P + L EN+ N+ I + V+D D+ NG+V H + + F+ E+ +D E T E +++L D G P L+ + +KV DENDN P++T S +S+ E+ ++ V A+D DS NA I++ L D P F+L+ TG L +L E Y+ ++A DNG PP S + T+++ + N
Sbjct: 156 KIRFLIEDINDNAP---LFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVL---VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAY------LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFT--------------QSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL---GPDAPPE--FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTS-NVTVFVSIIDQN 596 HSP 3 Score: 110.923 bits (276), Expect = 3.884e-23 Identity = 134/540 (24.81%), Postives = 235/540 (43.52%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDI----GPNSVHSYTLEPLLDL-FELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKK--PLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYN-----VIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDND-GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISD 1749
E PVG + + + IG N ++ S + ++ + + + + + LDRE+ + +L + + V + + D+NDN P + V N + S+ +PL T I + ++ H+ + D P S + +L + +S + + ++ A DAG+ L L I + D NDN P+F + +V I E+ + +V D D G N +++ + + PE L RR G + + K L+ + DK+ I A+D+G PL+S + ++ID N+++P K + EN TV LI VTD D G+N V ++ E +FT + +I+ DRE S + D G +S+ ++I+V+DVN+ P V P YN V+P P F +VIA D D +A ++ +++ N F ID GN+ LM+ D H ++V D P+S + + +N+ +++
Sbjct: 292 ENAPVGTSVTQL-HATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAM-VLVNVTDVNDNVPSIDIRYIVNPV--NDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRR-------TGMLTVVKKLDR-EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHN---EYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLS-------ILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIV-PPYNYSYELVLPSTNPGTVVF-QVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNE 806
BLAST of Protocadherin 11 vs. TrEMBL
Match: A0A2H1C537 (Cadherin domain protein OS=Fasciola hepatica OX=6192 GN=D915_10443 PE=4 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 1.049e-96 Identity = 270/921 (29.32%), Postives = 421/921 (45.71%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDS--KLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLC----------------------------DKSN---CILQMSAFINAQTWIKVFIEIIDINDNSPKF-------EYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPL-LD--LFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQ-LCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQ----------------IIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELM--SSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKV-EPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITI--SDINDNIPKLLEPTSFHLYENLNGNS-TIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSP-SLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQ---------------------ASDPDSPENANISFKLISAF----------------------KDNIPVYLFTLELMTGN------LGTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYS----------SNSGFF-FGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRR 2553
EE VG +G++ D+ K I N L + L+D D +G +++ E+ LFV++R+DRE +C D+S C + ++ I Q W+ V I I DIND+ P F E + + V E+ GY L A D D G NSV +Y+L LD LF + Y PP +L LV+ ++D E KS + + ACD G+ Q LC + +ND+NDN+P+F K V + E +N TV ++ D D G G V + P ++ +F + + G++ ++ +N+ + P +F + + A+D G +PL + + V D+N+H P I ++ + Q + EN T + L++ D D G+N V C L + LE ++L DRE + + V ++C D G P +ST + I+I V+D NE+ P+ + + NV + E PV + +V ATD+D ++ L + F ID G + LDRE P V TD + R + NIT+ +DINDN P+L +FH+ EN G S +GQL D D G NG V++ L+ + + D F +N D G +F++R +DRE S+ L +LL D+G+P +L+ I + V DENDN P+W+ P + + A R + R +VN + A+DPD+P NAN+++ L++ + N+P Y F L TG+ LG G GL L + DNG PP S A L++++ S +N GF + T L + LIV L + C+ + L+VA +RR
Sbjct: 42 EESEVGSFVGNLKLDAERKFLIPYNQLTRFDLYD----DTRQGYFRVEQETGKLFVAARIDREAICPQPDALIPDKLTTYTEDLWSTLPGQRNGDQSGANVCQVHLALHIAQQFWVNVIITIHDINDHKPYFPIGSADAEPSLYTVNISESVTAGYEVPLIGAKDADAGMNSVQTYSLRGAELDPSLFAIAYKPPFTLNLVILRELDAETKST--YHGELVACDGGQPQPLCGAQPFQVFVNDLNDNKPVFTKSLYEVEVEETLPINSTVIRLNATDADSGPRGHVQYLFGQ-PISQAVHHHFRLDPVTGELITQRGMNARENP-RFIIPVVAKDGGLVPLIGQTVVQITVRDVNDHDPWIEIRAVQSVRQQGPQSRSNLTDKNTSLFVSENQPIGTNIGLLIAGDEDVGDNSAVVCHLKSNQAHFYLEHANSAKGREMYRLGTNLSFDREALLDGVVYVDVLCLDGGNPKRSTERKIAIQVLDENEFTPSFDTSQKTQNVYLEEGKPVGTFVIQVRATDEDATPKIEHYLSREAQNLFHIDAESGAITTRVILDREQMPKIRFNVYATDQDQSDRRASPAVANITVHLADINDNAPELTGNRAFHIVENRPGFSDLVGQLTSIDKDVGNNGTVRYSLVSVSGNGNPIANDTFMLNPDSGKLFTLRSLDREQYSQYELVVLLEDRGTPQALNSTATITVDVLDENDNAPVWSDPLRIMSALKYVSIPEALRQNSRMLGLVNFKDLGLLNATTPFYHGQKVTRLTATDPDAPHNANLTYHLLATYFIPFNEEFDLGKESAHSFASRVAPNVPTY-FKLSATTGDLFIGPGLGGAGSAKSGLAELYLRVCDNGNPPLDSS-ARLFVQLTSYNPTSVILDPNNGGFLSYLISTGHLGIALIVVLFVIMCLTSICLVVAFTTIRR 952
BLAST of Protocadherin 11 vs. TrEMBL
Match: A0A504YKU6 (Protocadherin-1 OS=Fasciola gigantica OX=46835 GN=FGIG_00296 PE=4 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 2.810e-96 Identity = 271/921 (29.42%), Postives = 422/921 (45.82%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDS--KLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLC----------------------------DKSN---CILQMSAFINAQTWIKVFIEIIDINDNSPKF-------EYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPL-LD--LFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQ-LCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQ----------------IIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELM--SSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKV-EPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITI--SDINDNIPKLLEPTSFHLYENLNGNS-TIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSP-SLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQ---------------------ASDPDSPENANISFKLISAF----------------------KDNIPVYLFTLELMTGN------LGTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYS---------SNSGFFFGG--ETDRLSLTLIVALASVTCIICVSLLVAIIIVRR 2553
EE VG +G++ D+ K I N L + L+D D +G +++ E+ LFV++R+DRE +C D+S C + ++ I Q W+ V I I DIND+ P F E + + V E+ GY L A D D G NSV +Y+L LD LF + Y PP +L LV+ ++D E KS + + ACD G+ Q LC + +ND+NDN+P+F K V + E +N TV ++ D D G G V + P ++ +F + + G++ R+ +N+ + P +F + + A+D G +PL + + V D+N+H P I ++ + Q + EN T + +++ D D G+N V C L + LE ++L DRE + + V ++C D G P +ST + I+I V+D NE+ P+ + + NV + E PV + +V ATD+D ++ L + F+ID G + LDRE P V TD + R + NIT+ +DINDN P+L +FH+ EN G S +GQL D D G NG V++ L+ + + D F +N D G +F++R +DRE S+ L +LL D+G+P +L+ I + V DENDN P+W+ P + + A R + R +VN + A+DPD+P NAN+++ L++ + N+P Y F L TG+ LG G GL L + DNG PP S A L++++ S SN+G F T L + LIV L + C+ + L+VA +RR
Sbjct: 42 EESEVGSFVGNLKLDAERKFLIPYNQLTRFDLYD----DTRQGYFRVEQETGKLFVAARIDREAICPQPDDLIPDKLTTYTEDIWSTLPGQRNGDQSGANVCQVHLALHIAQQFWVNVIITIHDINDHKPYFPIGSADAEPSLYTVNISESVTAGYEIPLIGAKDADAGMNSVQTYSLRGAELDPSLFAIAYKPPFTLNLVILQELDAETKST--YHGELVACDGGQPQPLCGAQPFQVFVNDLNDNKPVFTKSLYEVEVEETLPINSTVIRLNATDADSGPRGEVQYLFGQ-PISQAVHHHFRLDPVTGELATRRGMNARENP-RFIIPVVAKDGGLVPLMGQTVVQITVRDVNDHDPWIEIRAVQSVRQQGPQSRSNITDKNTSLFVSENQPIGTNIGVLIAGDEDVGDNSAVVCHLKSNQAHFYLEHANSAKGREMYRLGTNFSFDREALPDGVVYVDVLCLDGGNPKRSTERKIAIQVLDENEFTPSFDTSKKTQNVYLEEGKPVGTFVIQVRATDEDATPKIEHYLSREAQNLFQIDAESGAITTRVILDREQMPKIRFNVYATDQDHSDRRASPAVANITVHLADINDNAPELTGNRAFHIVENRPGFSDLVGQLTSIDKDVGNNGTVRYGLVSVSGNGNPIANDTFMLNPDSGKLFTLRSLDREQYSQYELVVLLEDRGTPHALNSTATITVDVLDENDNAPVWSDPLRIMSALKYVSVPEALRRNSRMLGLVNFKDLGLLNATTPFYHGQKVARLTATDPDAPHNANLTYHLLATYFIPFNEEYDLGKESAHSFVSRVAPNVPTY-FKLSETTGDLFIGPGLGGAGSAKSGLAELYLRVCDNGNPPLESS-ARLFVQLTSHNPTSVILDSNNGGFLSYLISTGHLGIALIVVLFVIMCLTSICLVVAFTTIRR 952
BLAST of Protocadherin 11 vs. TrEMBL
Match: A0A4E0R475 (Protocadherin-1 OS=Fasciola hepatica OX=6192 GN=D915_007004 PE=4 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 6.220e-96 Identity = 270/921 (29.32%), Postives = 421/921 (45.71%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDS--KLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLC----------------------------DKSN---CILQMSAFINAQTWIKVFIEIIDINDNSPKF-------EYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPL-LD--LFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQ-LCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQ----------------IIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELM--SSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKV-EPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITI--SDINDNIPKLLEPTSFHLYENLNGNS-TIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSP-SLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQ---------------------ASDPDSPENANISFKLISAF----------------------KDNIPVYLFTLELMTGN------LGTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYS----------SNSGFF-FGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRR 2553
EE VG +G++ D+ K I N L + L+D D +G +++ E+ LFV++R+DRE +C D+S C + ++ I Q W+ V I I DIND+ P F E + + V E+ GY L A D D G NSV +Y+L LD LF + Y PP +L LV+ ++D E KS + + ACD G+ Q LC + +ND+NDN+P+F K V + E +N TV ++ D D G G V + P ++ +F + + G++ ++ +N+ + P +F + + A+D G +PL + + V D+N+H P I ++ + Q + EN T + L++ D D G+N V C L + LE ++L DRE + + V ++C D G P +ST + I+I V+D NE+ P+ + + NV + E PV + +V ATD+D ++ L + F ID G + LDRE P V TD + R + NIT+ +DINDN P+L +FH+ EN G S +GQL D D G NG V++ L+ + + D F +N D G +F++R +DRE S+ L +LL D+G+P +L+ I + V DENDN P+W+ P + + A R + R +VN + A+DPD+P NAN+++ L++ + N+P Y F L TG+ LG G GL L + DNG PP S A L++++ S +N GF + T L + LIV L + C+ + L+VA +RR
Sbjct: 42 EESEVGSFVGNLKLDAERKFLIPYNQLTRFDLYD----DTRQGYFRVEQETGKLFVAARIDREAICPQPDALIPDKLTTYTEDLWSTLPGQRNGDQSGANVCQVHLALHIAQQFWVNVIITIHDINDHKPYFPIGSADAEPSLYTVNISESVTAGYEVPLIGAKDADAGMNSVQTYSLRGAELDPSLFAIAYKPPFTLNLVILRELDAETKST--YHGELVACDGGQPQPLCGAQPFQVFVNDLNDNKPVFTKSLYEVEVEETLPINSTVIRLNATDADSGPRGHVQYLFGQ-PISQAVHHHFRLDPVTGELITQRGMNARENP-RFIIPVVAKDGGLVPLIGQTVVQITVRDVNDHDPWIEIRAVQSVRQQGPQSRSNLTDKNTSLFVSENQPIGTNIGLLIAGDEDVGDNSAVVCHLKSNQAHFYLEHANSAKGREMYRLGTNLSFDREALLDGVVYVDVLCLDGGNPKRSTERKIAIQVLDENEFTPSFDTSQKTQNVYLEEGKPVGTFVIQVRATDEDATPKIEHYLSREAQNLFHIDAESGAITTRVILDREQMPKIRFNVYATDQDQSDRRASPAVANITVHLADINDNAPELTGNRAFHIVENRPGFSDLVGQLTSIDKDVGNNGTVRYSLVSVSGNGNPIANDTFMLNPDSGKLFTLRSLDREQYSQYELVVLLEDRGTPQALNSTATITVDVLDENDNAPVWSDPLRIMSALKYVSIPEALRQNSRMLGLVNFKDLGLLNATTPFYHGQKVTRLTATDPDAPHNANLTYHLLATYFIPFNEEFDLGKESAHSFASRVAPNVPTY-FKLSATTGDLFIGPGLGGAGSAKSGLAELYLRVCDNGNPPLDSS-ARLFVQLTSYNPTSVILDPNNGGFLSYLISTGHLGIALIVVLFVIMCLTSICLVVAFTTIRR 952
BLAST of Protocadherin 11 vs. TrEMBL
Match: A0A1S8XBC1 (Cadherin domain protein OS=Opisthorchis viverrini OX=6198 GN=X801_00089 PE=4 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 8.707e-96 Identity = 286/914 (31.29%), Postives = 427/914 (46.72%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDS--KLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLC------------------------------DKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTS--------FVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL---EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGE-DQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKP--------TLGNK-----CQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELM--SSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEP-SYNVIPEDLPVNSSFA-KVIATDKDPDANLKLTLISDNDGFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITIS--DINDNIPKLLEPTSFHLYENLNGNS-TIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSP-SLSHEEKIVLKVADENDNEPIW--TFPSDENNQFNF--SISSSAARLSV-----------------RESFIVNVQASDPDSPENANISFKLISAF-------------------KDNIPVYLF----TLELMTGNLGTNGELSE-GLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDR-----------LSLTLIVALASVTCIICVSLLVAIIIVRR 2553
EE VG IG++ D+ K I + L +L+D D + +I+P+S LFV++R+DRE +C D C L +S F+ + WI V I I DINDN P F S +VV E+ Q G+ L A D D G N+V SYTL E LF + Y+PP +L L++ ++D E+K+N + + ACD G+ C L I + DVNDN+P+F K V + E TV V D D G +G V ++I P +++ +F + + +G +Y +K +++ D F + + A+D G +PL + + +V D+N+HAP I V+P T G K + EN T + LI+V D D G+N V C+L Y LE + L + DRE + S +V I C D G P + T KSI+I ++DVNE+ P + +YN+ E+ SF + ATD D + L + F ID G + K LDRE P V TD + S S NITI+ DINDN P L+E + EN G S +GQL D D+GLNG V++ L+ T N+ L+ D F VN++ G +F++R +DRE S+ L +L D G+P S + + IV+ V DENDN+P W P + Q++ + S A+RL R + + A+D DS NAN++F L++ + +P Y + ELM G LSE GL + + SDNG PP K A L++++ ++S F G + + + + L + L V C+ + L+VA +R+
Sbjct: 41 EEAEVGSFIGNLKLDAERKFLIPYSQLTHFELYD----DSKQNYFRIEPDSGKLFVAARIDRETICPQPELLSGRLAVQDHRMWAPTLGSEEYGQSDSKKCELHLSLFVAQEYWINVIIAIHDINDNRPYFPIGSGESTKPNVYVVSVSESVQPGHEVPLIGARDSDSGINAVQSYTLRGDELNPALFAVSYSPPFTLNLIVLDELDAERKAN--YTGEIVACDGGQPSPKCGVQPLLIHVTDVNDNKPVFEKQVYEVTVNETVLNGSTVLTVHASDADSGSHGSVRYQIGQ-PVSQVVLDHFGLDASSGRLYTKKPIDAKDTA-LFVIPVLAKDGGNVPLIGQSVVRISVTDVNDHAPWIEVRPVQLPGKQVTSGVKFSEGAMWVYENQPVGTNLGLIIVGDEDIGDNSLVECKLQEREYRFYLEHANSAKGREMYSLSTNQSFDRESLPDGSTSVQITCSDKGDPTQKTEKSIAIQILDVNEFSPEFPADRRNYNIQIEEGQNPGSFVFQAEATDLDATPMIYYYLSREAQSLFHIDPHSGRVTTRKLLDRESTPKIRFTVHATDKNLLESDVNSTLANITITLTDINDNEPTLVENEVLRIVENRPGFSDLVGQLIAIDKDAGLNGTVRYKLLSVLTENNNLVNDTFMVNQESGKLFTLRSLDREQCSQYRLHVLAYDLGTPESKNTTQTIVVDVLDENDNKPEWRPMLPLLPDGQYSAQSAYSKYASRLLGLDKVFELGQLNTTAPLHRGQRVCKLAATDADSARNANLTFHLVTTYFTPEIEGDDTQRLMYHSGKATTMPNYFMVSSTSGELMIGAGLRGAGLSEPGLAEIYLRVSDNGNPPLE-KTARLFVRISDTSSSLFGMGTSGKGLLTYLISNGNIGIALTIVLIFVMCLTSICLIVAFSALRQ 945
BLAST of Protocadherin 11 vs. TrEMBL
Match: A0A074ZLL5 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_04911 PE=4 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 1.463e-94 Identity = 286/914 (31.29%), Postives = 427/914 (46.72%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDS--KLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLC------------------------------DKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTS--------FVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL---EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGE-DQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKP--------TLGNK-----CQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELM--SSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEP-SYNVIPEDLPVNSSFA-KVIATDKDPDANLKLTLISDNDGFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITIS--DINDNIPKLLEPTSFHLYENLNGNS-TIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSP-SLSHEEKIVLKVADENDNEPIW--TFPSDENNQFNF--SISSSAARLSV-----------------RESFIVNVQASDPDSPENANISFKLISAF-------------------KDNIPVYLF----TLELMTGNLGTNGELSE-GLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDR-----------LSLTLIVALASVTCIICVSLLVAIIIVRR 2553
EE VG IG++ D+ K I + L +L+D D + +I+P+S LFV++R+DRE +C D C L +S F+ + WI V I I DINDN P F S +VV E+ Q G+ L A D D G N+V SYTL E LF + Y+PP +L L++ ++D E+K+N + + ACD G+ C L I + DVNDN+P+F K V + E TV V D D G +G V ++I P +++ +F + + +G +Y +K +++ D F + + A+D G +PL + + +V D+N+HAP I V+P T G K + EN T + LI+V D D G+N V C+L Y LE + L + DRE + S +V I C D G P + T KSI+I ++DVNE+ P + +YN+ E+ SF + ATD D + L + F ID G + K LDRE P V TD + S S NITI+ DINDN P L+E + EN G S +GQL D D+GLNG V++ L+ T N+ L+ D F VN++ G +F++R +DRE S+ L +L D G+P S + + IV+ V DENDN+P W P + Q++ + S A+RL R + + A+D DS NAN++F L++ + +P Y + ELM G LSE GL + + SDNG PP K A L++++ ++S F G + + + + L + L V C+ + L+VA +R+
Sbjct: 41 EEAEVGSFIGNLKLDAERKFLIPYSQLTHFELYD----DSKQNYFRIEPDSGKLFVAARIDRETICPQPELLSGRLAVQDHRMWAPTLGSEEYGQSDSKKCELHLSLFVAQEYWINVIIAIHDINDNRPYFPIGSGESTKPNVYVVSVSESVQPGHEVPLIGARDSDSGINAVQSYTLRGDELNPALFAVSYSPPFTLNLIVLDELDAERKAN--YTGEIVACDGGQPSPKCGVQPLLIHVTDVNDNKPVFEKQVYEVTVNETVLNGSTVLTVHASDADSGSHGSVRYQIGQ-PVSQVVLDHFGLDASSGRLYTKKPIDAKDTA-LFVIPVLAKDGGNVPLIGQSVVRISVTDVNDHAPWIEVRPVQLPGKQVTSGVKFSEGAMWVYENQPVGTNLGLIIVGDEDIGDNSLVECKLQEREYRFYLEHANSAKGREMYSLSTNQSFDRESLPDGSTSVQITCSDKGDPTQKTEKSIAIQILDVNEFSPEFPADRRNYNIQIEEGQNPGSFVFQAEATDLDATPMIYYYLSREAQSLFHIDPHSGRVTTRKLLDRESTPKIRFTVHATDKNLLESDVNSTLANITITLTDINDNEPTLVENEVLRIVENRPGFSDLVGQLIAIDKDAGLNGTVRYKLLSVLTENNNLVNDTFMVNQESGKLFTLRSLDREQCSQYRLHVLAYDLGTPESKNTTQTIVVDVLDENDNKPEWRPMLPLLPDGQYSAQSAYSKYASRLLGLDKVFELGQLNTTAPLHRGQRVCKLAATDADSARNANLTFHLVTTYFTPEIEGDDTQRLMYHSGKATTMPNYFMVSSTSGELMIGAGLRGAGLSEPGLAEIYLRVSDNGNPPLE-KTARLFVRISDTSSSLFGMGTSGKGLLTYLISNGNIGIALTIVLIFVMCLTSICLIVAFSALRQ 945
BLAST of Protocadherin 11 vs. Ensembl Cavefish
Match: ENSAMXT00000036470.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:10716691:10726912:1 gene:ENSAMXG00000037804.1 transcript:ENSAMXT00000036470.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 250.366 bits (638), Expect = 1.686e-68 Identity = 231/827 (27.93%), Postives = 390/827 (47.16%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDK-SNCILQMSAFINAQTWIKVF---IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPR---SLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRL-ARRYFSV-------KSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDV----FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG---LYVLKMMASDNGRPPKHSKDATLYIKVYSSNSG----------FFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRRHR 2559
V EEV G ++G++ KD L I L + ++F + S +S + ++ LFV+ R+DRE LC C + + A AQ +K+F + I+DINDN+P F + ++ E S +G LPLA D D G N+V +Y L P + F L S++LVL+ +D E +S + + + A D G+ L + I I DVNDN P+F + V++ E+ V + DLDEG N +++ I + L A YFS+ ++I+ + L+K+L+ + L +TA D G S L NVID+N++ P+ + K ++ENT+ T V + TD D G NG++ L + + + S T ++ +K PLDRE ++ + +D G +++ + I V+DVN+ PP + V + + ED ++ + D D N +++ G F + + +L + PLDRE P + + +L TD P ++S+ L + I+D+NDN P+ + T F++ EN + I + DPD N ++ + LI+ ++ + +N G I+S + + E ++ TD G+P LS + + + DENDN P+ P E N +A F+ V+A D DS NA +S+ + +N LF + +G + T +S+ + L + D+G P S AT+ + V + S L+L L++A+ SV+ I +S L+A+I + +R
Sbjct: 34 VSEEVKAGTVVGNVAKD--LNINVQDL-EARMFRIVSSRKS---FDVSLKTGALFVTDRIDREALCSTIKKCSMHIEAM--AQNPLKLFRIEVHIMDINDNAPLFPVSKQILNITELSAVGEKFTLPLAEDPDTGSNAVKNYKLSP-NEYFSLNVQNGEDSGSVELVLQKALDRETQSVIHLI--LTAIDGGKPPLSGTTEIAILILDVNDNSPVFSQSLYKVKVKENAAFGTKVLSLSATDLDEGLNSEITYAIIR--QGTLSANEYFSLNVQSGGEQNISPQLVLQKALDR-EKQATVQLILTALDGGRPHRSGTLDLSINVIDVNDNTPAFSKEMY---KVSVLENTLPGTPVIKLNATDLDAGLNGEIVYSLISHGKEKWADIFAINSITGEITVKGPLDREDTAAFELHAQAQDKGSSPRASHCKVLIEVLDVNDSPPVISVTSLTSTVREDATTGTAVGLITIADNDIGKNGEVSAKVKGTGPFALQASYKNYYSLVVNGPLDREDMPQYSVTILATDKGTP-PLSSSIVLAVDIADVNDNAPRFSDIVTVFYVKENSPSGNIIATVTAQDPDVNENAQIVYSLINRKNMDSSWMS-MVDINPVSGDIYSKQSFNYEEVKSFQFKVQATDSGAPPLSSNVTVNVFIVDENDNRPVILPPYSEAGSLNTENIPYSAEAGY---FVGKVRAIDADSGYNALLSYHITEPKGNN----LFRIGSSSGEIRTKRRMSDNDLKTHPLVITVCDHGEP---SLSATVSVDVVVAESMDSVRPSLREVQIKEDNFSNLNLYLLIAIVSVSVIFLLS-LIALIAAKCYR 830
BLAST of Protocadherin 11 vs. Ensembl Cavefish
Match: ENSAMXT00000049785.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:10740740:10748152:1 gene:ENSAMXG00000032814.1 transcript:ENSAMXT00000049785.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 237.269 bits (604), Expect = 9.698e-65 Identity = 198/682 (29.03%), Postives = 329/682 (48.24%), Query Frame = 1
Query: 73 MSLIMFEMFFCILTLMKLFIXXXXXXXXXXXXXXXVFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCD-KSNCILQMSAFINAQTWIKVF---IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP----LLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPFH-------PLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYEN-------LNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLS 2046
M + FC+ TL+ LF + S S + EEV G ++G++ KD + + Q+ +K + ++ LFV+ RLDRE+LC+ K C L + AQ IK++ + + DINDNSP F + V EN G LPLA D+D+G NS+ SYTL P LD+ + S +LVL+ +D EK+S ++ A D G+ + +++ +++ D+NDN P+F K +++ E+ + V D DEG NG + + + N A R FS+ +NG+I ++ +++ + P L I A+D + P + CK++ V D+N++AP I+V + I E+ VALI VTD D G NGKV+C++ TS F + ++ +++ LI+ +PLDREL+S N++++ D G P S+ I++ + DVN+ P + + + E+ PV A + A D D +A++ +LI ++ N+ + L+ F+ V TD P + ++++ +N+ I D NDN P +L P S N +G+++ D DSG N + +Y I + + F V G I + R + L + ++D G PSLS
Sbjct: 1 MGFTTSGIGFCLRTLLLLFCWDFSRGQISYS----ISEEVKKGTVVGNLAKDLNVDVQELQSRMLQVV----AGSNKRYFDVNLKTGVLFVNDRLDREELCESKQKCSLNIEVM--AQNPIKLYRVEVNVADINDNSPFFPLETLVKNIIENVVPGDRFSLPLARDLDVGMNSLKSYTLSPNEHFSLDV-QSYGEQSVSAELVLQKPLDREKQS--IVKLKLTAVDGGKPAKSATMDIIVNVLDINDNNPVFSKPLYKIKVKENLPFGTKIITVAATDSDEGTNGEIMYSLVEQDGNS-ASRLFSINEVNGEISVKGNIDYEENP-AIELRIQAQDKSSSPRLTLCKVLIEVEDVNDNAPEILVTLL---RSSISEDIKPGADVALITVTDKDDGKNGKVDCKIVGTSPFRLQLSYK---NSYSLIVNEPLDRELVSQYNITVIASDEGSPSLSSTAVITVHISDVNDNSPVFQAPVIHISVKENSPVGGLLATITAHDSDIGENAHVSYSLIDGESSRTQVSTLMNINYLTGELYSLQSFNYEETKQIQFKVQATDAGIP-ALSSNVTVNVFILDENDNRPVILAPYSEAGTVNTENIPYSAEAGYFVGKIRAVDADSGYNA------LLSYHITEPKGNNLFRVGSSSGEIRTKRRMSDNDLKTHPLVLTVSDHGEPSLS 654 HSP 2 Score: 147.902 bits (372), Expect = 9.752e-36 Identity = 159/620 (25.65%), Postives = 278/620 (44.84%), Query Frame = 1
Query: 760 LNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDV-FGN---LKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVS----DPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDEN---NQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG---LYVLKMMASDNGRPPKHSKDATLYI-------------KVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAI 2538
+ +++ D+NDN P F I+E+ L +DLD G N S+ ++ L + + +S++ ++ L+K L+ + L +TA D G S+ +I NV+DIN++ P + KP K ++ EN T + + TD D+G NG++ L + ++ +K +D E +I + I +D + TL + I V DVN+ P + V + I ED+ + A + TDKD N K+ F + + + N L + +PLDREL + + V+ +D P+ +T++ + + ISD+NDN P P ++ ++ NS +G L + D D G N V + LI + + + +N G ++S++ + E T +I ++ TD G P+LS + + + DENDN P+ P E N N S+ A F+ ++A D DS NA +S+ + +N LF + +G + T +S+ + L + SD+G P + + + +V GF L+L L++A+ SV+ I +SL+ I
Sbjct: 116 VEVNVADINDNSPFFPLETLVKNIIENVVPGDRFSLPLARDLDVGMNSLKSYTLSPNEHFSLDVQSYGEQSVSAELVLQKPLDR-EKQSIVKLKLTAVDGGKPAKSATMDIIVNVLDINDNNP-VFSKPLY--KIKVKENLPFGTKIITVAATDSDEGTNGEIMYSLVEQDGNSASRLFSINEVNGEISVKGNIDYEENPAIELRIQAQDKSSSPRLTLCKVLIEVEDVNDNAPEILVTLLRSSISEDIKPGADVALITVTDKDDGKNGKVDCKIVGTSPFRLQLSYKNSYSLIVNEPLDRELVSQYNITVIASDEGSPSLSSTAV-ITVHISDVNDNSPVFQAPV---IHISVKENSPVGGLLATITAHDSDIGENAHVSYSLIDGESSRTQ-VSTLMNINYLTGELYSLQSFNYEETKQIQFKVQATDAGIPALSSNVTVNVFILDENDNRPVILAPYSEAGTVNTENIPYSAEAGY------FVGKIRAVDADSGYNALLSYHITEPKGNN----LFRVGSSSGEIRTKRRMSDNDLKTHPLVLTVSDHGEPSLSATVSVDVVVVENVDSIQPSLRQVPMKEEGF------SDLNLYLLIAIVSVSGIFLLSLITLI 710 HSP 3 Score: 137.502 bits (345), Expect = 1.655e-32 Identity = 138/504 (27.38%), Postives = 235/504 (46.63%), Query Frame = 1
Query: 949 RRYFSVKSINGDIYLRKSLNSIDI---PDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVI-LERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDG-----FFEI-DVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKL-IKDKF--FVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRE-----SFIVNVQASDPDSPENANISFKLISAFKDNIPV-YLFTLELMTGNLGT----NGELSEGLYVLKMMASDNGRP 2382
+RYF V G +++ L+ ++ K L I I L ++ NV DIN+++P ++ + N IIEN + +L + D D G N + LS +F + ++ + S + +L+++KPLDRE S + + + D G P KS I ++V+D+N+ P +P Y + + E+LP + V ATD D N ++ + + DG F I +V G + + +D E P L + D S + R T + I + D+NDN P++L + E++ + + + V+D D G NGKV ++ +L K+ + VNE P+DRE+ S+ + ++ +D+GSPSLS I + ++D NDN P++ P +SV+E + + A D D ENA++S+ LI V L + +TG L + N E ++ + K+ A+D G P
Sbjct: 69 KRYFDVNLKTGVLFVNDRLDREELCESKQKCSLNIEVMAQNPIKL---YRVEVNVADINDNSPFFPLETLVKN---IIENVVPGDRFSLPLARDLDVGMNSLKSYTLSPNEHFSLDVQSYGEQSVSAELVLQKPLDREKQSIVKLKLTAVDGGKPAKSATMDIIVNVLDINDNNPVFS-KPLYKIKVKENLPFGTKIITVAATDSDEGTNGEIMYSLVEQDGNSASRLFSINEVNGEISVKGNIDYEENPAIELRIQAQDKSS-SPRLTLCKVLIEVEDVNDNAPEILVTLLRSSISEDIKPGADVALITVTDKDDGKNGKVDCKIVGTSPFRLQLSYKNSYSLIVNE---------PLDRELVSQYNITVIASDEGSPSLSSTAVITVHISDVNDNSPVFQAP--------------VIHISVKENSPVGGLLATITAHDSDIGENAHVSYSLIDGESSRTQVSTLMNINYLTGELYSLQSFNYEETKQIQ-FKVQATDAGIP 540
BLAST of Protocadherin 11 vs. Ensembl Cavefish
Match: ENSAMXT00000035099.1 (protocadherin-10-like [Source:NCBI gene;Acc:103034638]) HSP 1 Score: 234.187 bits (596), Expect = 2.757e-63 Identity = 190/659 (28.83%), Postives = 319/659 (48.41%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSN-CILQMSAFI-NAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEIN-HTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLT---LISDNDG-----FFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYEN-----------LNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPI-DREVTSEIILRILLTDQGSPSLSHEEKIVLKVAD 2079
V EE+ G +G++ +D L K +L T + +++ E+ LFV+ R+DREQLC++S C L + A + N +V +E++D+NDN+P F F ++ E++ G L A D D+G N++ SY L + F L + +LVL+ +D E++ + + + A D G + +LN+++ D NDN P F + ++ME+ V ++ D DEG NG V + + H P R FSV G++ +R L + + + A+D G ++ CK++ V+D+N++ P +I+ T + E+ + T +A+I V D D G NG V+CE+ + F + ++ + + L+ LDRE + N+++ RD G P T K+I + V DVN+ P K +PSYNV + E+ P S + A D D N L+ L +D G + I+ GN+ ++ DRE LV+ D P + +++ LN+ + D NDN P ++ P L EN + + ++ +D D G N K+ + ++ A + L+ F G + IR + D + T+ +L IL+ D G PSLS I+L V D
Sbjct: 29 VPEEMEHGAFVGNLAEDLGLRPSELSERKFRLVSGTR----RRYLEVNMENGVLFVNERVDREQLCEQSPLCFLHLQAVLENPLELHRVELEVLDVNDNAPNFPRAGFSLDISESATPGSRFPLESAQDADVGENALRSYLLS-VNAHFALDVRAGKFAELVLQRPLDREQQGAHHMV--ITAVDGGSPERSGSAHLNVTVVDANDNAPAFERETYRAKVMENAHRGTVVIRLNATDPDEGLNGEVMYSFSGHAPAK--VRELFSVDPRTGEVRVR-GLVDYEKATMHEIYVQAKDKGPNAIAVHCKVLVTVVDVNDNRPEVILTST---SAPVQEDALPGTVIAVISVMDQDSGENGHVDCEIPHHVPFQLHSSFK---NYYTLVTSDFLDREKVPEYNITLTARDMGSPPLFTRKTIVVQVADVNDNAPVFK-QPSYNVYLTENNPPGFSVFTISAQDADAGQNSYLSYSVLETDIQGAPASTYVSINSDNGNIYALRSFDREQLKSFQLVIQAKDAGLP-PQVSNMTLNVFVLDQNDNAPVIVSP----LPENGTAANEIIPTSADAGHLVAKVTATDVDEGQNAKLLYQMLQA--TDPTLVSIALFT----GEVRMIRSLRDGDPTTHRLL-ILVKDSGEPSLSATASIILSVVD 658 HSP 2 Score: 137.117 bits (344), Expect = 2.198e-32 Identity = 135/513 (26.32%), Postives = 235/513 (45.81%), Query Frame = 1
Query: 331 CDLFVSSRLDREQLCDKSNCILQMSAFINAQTW-IKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNS--VHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNT-------SYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEP-------SYNVIPEDLPVNSSFAKVIATDKDPDANLKL---TLISDNDGFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPN-SRTTSLALNITISDIN-DNIPKLLEPTSFHLY 1800
+L + LDREQ I + ++ + + ++D NDN+P FE ++ + EN+ G ATD D G N ++S++ + EL PR+ ++ +RG VDYEK + V+A D G + + + +++ DVNDNRP + + S + ED + + V D D GENG V EI H +L + + ++ +L + +P+ +++ +TARD G+ PL + ++ V D+N++AP + +P+ + EN +V I D D G N ++ + T S +V S + + DRE + S + I +D G+P + + ++++ V+D N+ P + V P + +IP AKV ATD D N KL L + + I +F G +++++ L H L++LV D+ P+ S T S+ L++ S+ ++PK P LY
Sbjct: 182 AELVLQRPLDREQQGAHHMVITAVDGGSPERSGSAHLNVTVVDANDNAPAFERETYRAKVMENAHRGTVVIRLNATDPDEGLNGEVMYSFSGHAPAKVRELFSVDPRTGEVRVRGLVDYEKATMHEIY--VQAKDKGPNAIAVHCKVLVTVVDVNDNRPEVILTSTSAPVQEDALPGTVIAVISVMDQDSGENGHVDCEIPHHVPFQLHSSFKNYYTLVTSDFLDRE----KVPE-YNITLTARDMGSPPLFTRKTIVVQVADVNDNAP-VFKQPSY--NVYLTENNPPGFSVFTISAQDADAGQNSYLSYSVLETDIQGAPASTYV-----SINSDNGNIYALRSFDREQLKSFQLVIQAKDAGLPPQVSNMTLNVFVLDQNDNAPVI-VSPLPENGTAANEIIPTSADAGHLVAKVTATDVDEGQNAKLLYQMLQATDPTLVSIALFTGEVRMIRSLRDGDPTTHRLLILVKDSGEPSLSATASIILSVVDSEPEFSDLPK--RPGDHALY 676 HSP 3 Score: 129.028 bits (323), Expect = 8.680e-30 Identity = 147/610 (24.10%), Postives = 263/610 (43.11%), Query Frame = 1
Query: 760 LNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEI-DVFGNLKLMKP---LDRELRPFHPLVVLVTD-NSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG---LYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFF-FGGETDRLSLTLIVALASV--TCIICVSLLVAIIIVRR 2553
+ + + DVNDN P F + S+ I E +D D GEN S+ ++ L R ++ L++ L+ + H+ ITA D G+ S L V+D N++AP+ + + +++EN T V + TD D+G NG+V S + + E + T ++ ++ +D E + + + +D G + + ++V+DVN+ P + + + + ED + A + D+D N + + F++ F N + LDRE P + + + D SPP T + + ++D+NDN P +P+ + +L EN ++ + D D+G N + + ++ I +N D+G I+++R DRE L I D G P + + V D+NDN P+ P EN I ++A + V A+D D +NA + ++++ A L ++ L TG + L +G + L ++ D+G P S A++ + V S F +L LIV+L +V T ++ + +L AI RR
Sbjct: 113 VELEVLDVNDNAPNFPRAGFSLDISESATPGSRFPLESAQDADVGENALRSYLLSVNAHFALDVRAGKF----AELVLQRPLDR-EQQGAHHMVITAVDGGSPERSGSAHLNVTVVDANDNAPAFERETY---RAKVMENAHRGTVVIRLNATDPDEGLNGEVMYSFSGHAPAKVRELFSVDPRTGEVRVRGLVDYEKATMHEIYVQAKDKGPNAIAVHCKVLVTVVDVNDNRPEVILTSTSAPVQEDALPGTVIAVISVMDQDSGENGHVDCEIPHHVPFQLHSSFKNYYTLVTSDFLDREKVPEYNITLTARDMGSPP--LFTRKTIVVQVADVNDNAPVFKQPSYNVYLTENNPPGFSVFTISAQDADAGQNSYLSYSVLET-DIQGAPASTYVSINSDNGNIYALRSFDREQLKSFQLVIQAKDAGLPPQVSNMTLNVFVLDQNDNAPVIVSPLPENGTAANEIIPTSADAG---HLVAKVTATDVDEGQNAKLLYQMLQATDPT----LVSIALFTGEVRMIRSLRDGDPTTHRLLILVKDSGE-PSLSATASIILSVVDSEPEFSDLPKRPGDHALYLIVSLGAVSFTFLVAIIVLAAIKGYRR 703
BLAST of Protocadherin 11 vs. Ensembl Cavefish
Match: pcdh7a (protocadherin 7a [Source:ZFIN;Acc:ZDB-GENE-120206-1]) HSP 1 Score: 230.72 bits (587), Expect = 7.150e-62 Identity = 225/821 (27.41%), Postives = 359/821 (43.73%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQL-FDMTSHDQSKGVIQIKPESCDLFVSSR-LDREQL--C----DKSNCIL--QMSAFINAQTWIKVF---IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL------------------------------------EPLLDLFELMY--TP--PRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKP-----TLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWE-FTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDN--DGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDK--FFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELS---EGLYVLKMMASDNGRPPKHSKDATLYIKVYSSNS 2436
+ EE P IG++ D L + ++G+ + F + S + +I + +L SSR +DRE+L C D++ C L ++S Q+W+ +F I + D+NDN+P F + EN IG LP ATD D G N + Y L ++FEL TP + +L+++G +D E + + + RV+ D G S+ L ++I DVNDN P F + + E+T V QV D D G NG+V + E+ RR + +G + + ++ ++ + +TARD G P + +I NV D N++ P + ++ + EN + T VAL+ V+D D+G NG V C + F + E F L LD E V+IV D+G P S+ ++ + V+D+N++ P E+ V+A D D N ++ D +G F ID G+++ LDRE R + V+ D P S S + + ++D NDN PK ++ +F++ ENL NS +G + V+D D G N ++ + + + + F + + GTIFS DRE S R+ D G P S + L V DENDN P T P++E+ + +S AR VR V ASD D+ NA++ + L+ P LF + +G + L GL+ L + +D+G P S AT + V+ + S
Sbjct: 38 IAEEGPPDVRIGNVAAD--LGLSTSGIGTGDVTFALESGAE---FFKIDNVTGELTTSSRRIDREKLPQCQMIFDENECFLDFEVSVIGPLQSWVDLFEGRIVVTDVNDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIDRYELVQDSRDQRRPASATMPAGINNGAGDRRRGQEAGSVPAGRSNVFELQVADTPDGQKQPQLIVKGPLDREARDSYELVLRVR--DGGNPPRSSQALLRVAITDVNDNSPRFERAVYEAEMGENTPPGTPVLQVRASDRDIGVNGQVEYVFGAATES--VRRLLRLDEASGWLSVLHRIDREEV-SQLRFTVTARDRGQPPRTDRATVILNVRDENDNVPVVEIRKIGRILVRDGAAMVPENVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGENRNKKKFFLHTSALLDYEATRDYTVTIVAVDSGSPSLSSNSTLMVRVVDINDHAPTFAQSLVEVHFAENNAPGERVVTVVAADADSGKNAEIAYSLDPSVNGAFYIDADNGDIRATGALDREQRERYEFRVIARDKGSP-SLQGSATVVVQVTDRNDNAPKFVQEVFTFYVKENLLANSPVGMVTVTDADEGENAELCLFVEEDEEEEEAGGRRQELFSIENNTGTIFSAASFDRESRSTYTFRVRAVDGGEPPRSATATVSLFVTDENDNAPSVTAPANES--YTLLPPASGARTVVR-----TVMASDGDAGSNADLRYALVGGN----PFQLFEIGPSSGVITLAEPLERRHRGLHRLVVRVNDSGVP---SLCATALVHVFINES 833
BLAST of Protocadherin 11 vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 230.335 bits (586), Expect = 8.746e-62 Identity = 231/780 (29.62%), Postives = 351/780 (45.00%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSS-RLDREQLCD----KSNCILQ----MSAFINAQT--WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLD---LFELMYTPPRSLKL---VLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPD-KFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQ------IIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFT---SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNE-----YPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL--TLISDND--GFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHS 2394
V EE P +IG + D L S L K ++ +++ ++ ++F + +DRE L D C L+ ++ I Q+ I+ IE+ DINDN+P+F + EN+ +G + +P ATD D N V Y L + LF L R KL ++ G +D E K + Y LT + A D G S L + I D NDN P F K + + E++ + +V QV D D G NG + + I+ + + ++ G I ++ L+ +I KFH + ARD G P SS + V D N++AP++ ++ +G + I E+ T VAL+ V+D D+G N V C ++ F + + + + L PLD E + V IV D+G P S+ S+ + V D N+ PP +VE E+ VIA D D N +L ++I+D+ G FEID G ++ PLDRE + + V D P+ R T+ + I + D NDN PK +L SF + EN+ S +G + V D D G N +V+ L + N F V GTI S DRE S R+ D G P S + + V DENDN P+ T PS N+ F + L+ +S + V+A D D NA +L+ + P LF + G + EL+ GL+ L + SD G+P +H+
Sbjct: 29 VREEQPPNTLIGSLAADQGLP-DSGHLYKLEV--------GAPYLRVDGKTGEIFTTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELK-DSYDLT-INAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDP--VPKMLQIERSTGIISVKGPLDREEISSFKFH--VIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIR-GIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVE-----FAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVV-IKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQ-LSVEPDVGN-------FVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPS--NSSFR-----RLSPLAAPDSVVEVVEAEDIDYGSNA----ELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHA 767
BLAST of Protocadherin 11 vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 210.305 bits (534), Expect = 5.041e-56 Identity = 219/783 (27.97%), Postives = 360/783 (45.98%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSR-LDREQLC------DKSNCILQMSAF-INAQTW---IKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP----LLDLFELMYTPPRSLK----LVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI----NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI----IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLT--LISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL-LEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKV 2421
V EE+ G IG+ D +LA + L + + D + ++++ P + +LF + R +DRE LC D+ + +Q+ + + I+V I + DINDN+P F V EN+ G + A D D N V Y L P + FEL T + + LV+R +D E++ + + ++A D G L I++ D NDN P+F + +V I E++ + V Q+ D D G N V + + + +R F + +G + + LN + P + + I A D G P+ + + V D+N+++P+I IV P G I E + VALI V+D D G NG V C + N L++ + + + L ++ LD E + V I D G S S++I ++D N+ P EP+Y V +PE+ + V ATD+D D N ++ L D F +D G + L + LDRE + + +L D P + + + + D+NDN P+ L F++ EN+ +ST+G + V+D D G NG+V+ ++ T N +L F ++ + G I S DRE +L + TD G P S K+V+ V D NDN PI P N + F + ++ + + V A D D+ NA + + ++ N LF ++ + GN+ L+E GL+ L + SD G +H A +++ V
Sbjct: 43 VAEELREGAFIGNPSVDLRLADYNLELTYKVMLS-KAEDAAPPLVRVNPRTGELFAAGRKMDREALCGGQDPGDECHVDVQVGVLPVQPGPFFKLIEVRINVEDINDNAPAFAAPVLTVSVPENAPAGKRFPIQPANDPDSEANGVRRYELLPSDPATVSAFELSVTETANGEKVPYLVVRKSLDREER--QLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREESP-VYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNG-VIYISEASHVNLPVALITVSDPDIGANGAVTCYIYNPEVPFQLKKLTYPNQ-YLLETRETLDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVF-TEPTYKVSVPENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVI-VNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDEGENGRVRLSILG--TDNRQL----FSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEPVRSSTVKVVIHVMDINDNSPIVLMPP-SNTTYKFVVPR-----TLPGTIVTEVSAVDNDAEINAELRYHIVGGNPHN----LFHIDPVIGNITLMEPLTETHHGLHRLVVRVSDIGIAVQHHAVALVHVFV 801
BLAST of Protocadherin 11 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 188.348 bits (477), Expect = 3.383e-49 Identity = 220/813 (27.06%), Postives = 342/813 (42.07%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHD-----QSKGVIQIKPESCDLFVSSRLDREQLC--DKSNC-------ILQMSAFINAQT-----WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPL------LDLFELMYTPP-----------------RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKC-NESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLA-RRYFSVKSINGDIYLRKS--LNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG-----NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPS-------YNV-IPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEIDVF------GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-------SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDD---GTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLG---TNGELSEGLYVLKMMASDNG 2376
V EEV VG +IG + + SN L C F H + + + S +L V+ RLDRE LC + C +Q++A Q + V + + DIND++P F V E+ +G LP A D D G NS+ Y + L F L+ + R+L L LR ++D E + L + D G +L + L I + D NDN P+F+ VRI E +++ +V Q+ D D G NG +++ HT LA + V G + +R + L+ +P L + ARD G + S+ + + D N++AP V G +I+EN T V LI V+D D G++G V+ L + E F L + LD E NVS++ D G P S L ++ ISV+D+N+ P S Y V + E+ P + ++ATD D P+ + TL G ++F G L L PLDRE R + L V D P + ++ + +T+ D NDN P + + F + E + + +G + SD D G N +V L+ + + D G + ++ +DRE + L + D G P+LS ++ + V+D NDN P+ T P+ + + S A L V+V A+D D+ +N +++I P +F L +G L T L EGL+ L + D G
Sbjct: 33 VDEEVLVGYVIGDLRQ-------SNLLCVC-FFPPAPHVSPLPLHTPSLCIVNELSGELSVALRLDREALCMEEPDACRSTGFMHTVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRAL-LELREQLDREAVPSYELL--LWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSF-HTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMP-VHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLE---FPTGAELASPNKVQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAI-VRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLV-------REAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVITSPNTNDTWKHVRTFSPAGML-----VGVSVTANDIDAGDNGRPLYEIIGGN----PKGIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRG 812 HSP 2 Score: 100.523 bits (249), Expect = 1.038e-21 Identity = 110/404 (27.23%), Postives = 175/404 (43.32%), Query Frame = 1
Query: 1321 LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDAN--------LKLTLISDNDGFFEIDVFG--NLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIP---------KLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLI---KDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAA--RLSVRE-----SFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
L +++ LDRE + S + + D G P S ++I V+D N+ P P+ V I E V +S ++ A D D N KLT ++ G ++ + LDRE P H LVV+ D SR+ S+ + + ++D NDN P + L + ENL + + + VSDPD G +G V L + +L K +F + + R +D E + + +L D+G+P LS +++ V D NDN P++ P+ SI A +S+RE + ++N+ A+D DS N I+F L LF+L + TG L L Y L + A D G P + ++ A + + V N
Sbjct: 224 LELREQLDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGG-QLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRL--EFPTGAELASPNKVQFLLK-------TTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPA--------SIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKAR-AIVRVTVLDEN 608 HSP 3 Score: 91.2781 bits (225), Expect = 7.070e-19 Identity = 122/492 (24.80%), Postives = 202/492 (41.06%), Query Frame = 1
Query: 346 SSRLDREQL-CDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLAT--------DIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGK--VDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNE--------SVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQ----IIENTIGMTTVALIMVTDGDKGNNGKVNCEL-SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYN--------VIPEDLPVNSSFAKVIATDKDPDANLK--LTLISDN-DGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSR 1713
+ +LDRE + + + + ++ + V +E+ D NDN+P FE + E+ + + + LP T D D+G + LE EL P ++ +L+ +DYE+ + + V A D G +L LNL IS+ D+NDN P+F+ V + E+ V +L D D G NG ++F ++ FS+ G + L L+ + ++ L++ A D G+ + + V+D N++AP+ + N C + E T T V + +D D+G+N +V L I + + ++ LDRE +S+ D+G P S +SI+V D N+ P + P+ N P + V S V A D D N + +I N G F ++ G L L + + H LVV V D SR
Sbjct: 339 AEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLE-FPTGAEL--ASPNKVQFLLKTTRLLDYEEA--QQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDR-EKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTN-CMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVV--LDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVIT-SPNTNDTWKHVRTFSPAGMLVGVS---VTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRGGSGSR 817
BLAST of Protocadherin 11 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006996.1 (pep scaffold:Pmarinus_7.0:GL476780:2096:143714:1 gene:ENSPMAG00000006222.1 transcript:ENSPMAT00000006996.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 187.578 bits (475), Expect = 2.932e-48 Identity = 203/691 (29.38%), Postives = 314/691 (45.44%), Query Frame = 1
Query: 433 KVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFS--VKSINGDIYLRKSLNSIDIPD-KFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKG-NNGKVNC--ELSNTSYFVILER-WEFTSSTFKLIIKKPLDRELMSS--INVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDG---FFEIDVF-GNLKLMK-PLDRE-LRP-----FHPLVVLVTD-NSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLS---VRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKV 2421
+V I +I+ NDN P F + V +EN+ +G S LATD+D G SY D F L P S + + +D+E F V A D G + ++ +N+ DVNDN P+F + + E+ V +V D D N ++++ I T YFS V G + L ++L+ IP L I A D G+ PL+S I V D N+++P I + + I EN + TV + TDGD+ G+++ L ++ F I R + TS+T LDRE +S + V V +G K+ + +++I+++DVN+ PA + P I E+ P + V A DPD N TL+ D F+ I+ G ++ LDRE L P +VV D SPP T S + + + D+NDN P + P + + E L NST+ Q+ +DPD G NG V Y++ L + F ++ G I ++ +DRE + LR++ TD+G+P+LS + L V D NDN P F + SA L R+S ++++ +D DS NA +SF + +D F++ G + T L ++ Y L + A DNG P + T + V
Sbjct: 15 RVHITLINENDNRPIFSLPLYNVSVWENATLGTSVVQVLATDLDAGVFGQVSYHFSDDSDKFSL---DPASGLISVAAALDFEATPR--FTVTVMARDGGGQETAGRVRINLL--DVNDNTPVFQRDSYVGTARENDNSLTPVVRVRATDEDSPPNNQITYSILPTSA---YSSYFSITVSGGYGVVTLARALDYEKIPGGTISLTIMALDGGSPPLNSTVTAIVEVFDENDNSP-IFDRNSY--SIAIPENILAGATVLYVNATDGDQSPEYGQLSLIYSLEGSTQFRINARSGDITSTTL-------LDREAVSQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPAWRDLPYAVTIVENTPGGTDIFTVSA--ADPDLNENGTLVYAIDPPNPFYRINAASGKIRTTGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPYALQVLEGLPANSTLFQVTATDPDEGANGNVT------YSMTAALPRPDFQLDAATGLITTLVQLDREAVAAYQLRLVATDRGTPALSSTTTLSLVVLDVNDNAP------------TFHPARSAVSLMESVARDSVVISLNCTDADSGLNAELSFFITGGNQDG----QFSVGFRDGLVRTVVSLDRETKASYSLVIEAIDNG-PAGSRRTGTTTLDV 660 HSP 2 Score: 161.77 bits (408), Expect = 3.352e-40 Identity = 146/545 (26.79%), Postives = 243/545 (44.59%), Query Frame = 1
Query: 430 IKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYL------RKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVI--DINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFT--SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLI---SDNDGFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNS-RTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTI-FSIRPIDREVTSEIILRI 2013
+ +E+ D NDNSP F+ S+ + EN G + ATD D P +L L+ RS + +D E S + R G DQ +NI++ DVNDN P + +V I+E+T ++ V D D ENG + + I+ P N ++ + + +G I R+ LN I + ++ D G+ P + V+ D+N++ PS + P Q++E +T+ + TD D+G NG V ++ L R +F ++T + LDRE +++ + +V D G P S+ ++S+ V+DVN+ P S + E + +S + TD D N +L+ + DG F + G ++ + LDRE + + LV+ DN P S RT + L++ + D+NDN P LE + + EN+ + I Q++ +D D G+NG+V + +I F VN G I P+DRE + L++
Sbjct: 225 VTAIVEVFDENDNSPIFDRNSYSIAIPENILAGATVLYVNATDGDQSPE-YGQLSLIYSLEGSTQFRINARSGDITSTTLLDREAVSQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPAWRDLPYAVTIVENTPGGTDIFTVSAADPDLNENGTLVYAID--PPN----PFYRINAASGKIRTTGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPY---ALQVLEGLPANSTLFQVTATDPDEGANGNVTYSMT-----AALPRPDFQLDAATGLITTLVQLDREAVAAYQLRLVATDRGTPALSSTTTLSLVVLDVNDNAPTFHPARSAVSLMESVARDSVVISLNCTDADSGLNAELSFFITGGNQDGQFSVGFRDGLVRTVVSLDRETKASYSLVIEAIDNGPAGSRRTGTTTLDVLVLDVNDNRPLFLEGSYEVSVPENVTRGAIILQVQATDIDEGINGRVWYRIISGNQ------DGNFLVNVSSGLISRGATPLDRETVALHALQV 748 HSP 3 Score: 142.124 bits (357), Expect = 3.429e-34 Identity = 164/630 (26.03%), Postives = 274/630 (43.49%), Query Frame = 1
Query: 418 AQTWIKVFIEIIDINDNSPKFEYTSFVVEFYEN-SQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGED---QLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFE-INHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFH-LAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLI-IKKPLDRELMSSINVSIVCRDNGIPVKSTLKS---ISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSF----AKVIATDKD--PDANLKLTLISDNDGFFEIDV-FGN--LKLMKPLDRELRPFH--PLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL-LEPTSFHLYEN--LNGNSTIGQLKVSDPDSGL--NGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLS---VRESFIVNVQASDPDSP 2220
AQ V I I D NDN+P F ++ V E S G + A+D D G N+ Y + + ++ +D+E + Y L V A D D +L S +++ + DVND P FL+ E + + Q + + D D G NG + + I+ P N F + +GD+ +R+ + F+ L I A+D G PL+S + V+D++++ P + P + E + V+ + +D ++G N + S TS F ER + S L+ + +PLDRE ++ +++ RDN K + ++++D N+ P IPE+ P + + A+D D +A L +L+ + +F ID GN + L + LDRE P L +LV D R ++ L +T+ D+NDN P + + H+ EN G S I +K D D G+ G V++ + D F ++E G I ++ PID E E +L ++ TDQ P H L+V+ +N + + + +FS+++ A LS V + +V V A +P
Sbjct: 1152 AQATTSVLIRITDENDNAPAFGAATYEVLLTEGPSTAGVAVANVTASDPDEGDNARVVYAIVSGNTAATFGIDNGTGVLTAVKA-LDFEVSAGLYLLV-VTATDQPRDPARRLTSTATVSVHVADVNDVTPWFLRSYEGPIDVSEGQPGPRIATFMASDQDSGLNGELEYSIIDGDPRNE-----FVISPADGDLRVRRYVELDRETQAFYNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVFLNLPA---NASLSEAAAVLAIVSRVRASDANEGRNCAALLQHSPTS-FCNGERAFYADSQTGLVYVNRPLDRERVAEYRLTLTVRDNPDNPSYARKDSDIMIVTILDENDNSPVFSQVTYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAYFLIDRDRGNVSMALGQGLDREGIPGGRLELTILVQDG---GRRNATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVI-VVKAMDRDLGVCDAGTVRYSIASGG-------NDTFGIDESTGLIVTVAPIDYETRPEYLLMVVATDQAPP--FHTASCELRVSLQN----------ELDEKLSFSLAAYQAALSEAAVPGTVVVRVAAPQMKAP 1747 HSP 4 Score: 139.428 bits (350), Expect = 2.396e-33 Identity = 163/651 (25.04%), Postives = 290/651 (44.55%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSF-VVEFYENSQIGYSQELPLATDIDIGPNS-----VHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLK-CNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDK--FHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTS--YFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV--IPEDLPVNSSFAKVIATDKDPDANLKLT---LISDNDGFFEIDVF------GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLL------EP-TSFHLYENLNGNSTIGQLKVS-DPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTS--EIILRILLTDQGSPSLS-------------HEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLIS 2253
V++ + D NDNSP+FE S +VE E++ G + ATD D G N H++T + + L+ + +V K D+ +K++++ L R+ A D G + NL++ + DVNDN PIFL +V ++E V V D D G NG+V+F I ++L S+ +G I + N ID + + L + A D G PLS + V D+N+ P+ + ++E+ + VA + T+ KG+N K +++ F + +ST L K +R N++ V D+G P + + V+DVN++ P + P+ V I E +PV +V+A D D N + L + G + + F G + + LDRE + + L++L +D P S ++ L + + DI+DN P + P SF + E+ + +G + + D D G N V + I A +K ++ G + + +DREV+ II++ +P+++ E ++ L+ D ND P++T N+++ ++ A S ++ ++A D D N+ + ++++S
Sbjct: 1825 VYVNVTDENDNSPEFEAGSATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPRSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQVTFRIESGGGDKL-----SIGPSDGIIRVAPGAN-IDRETRAAYTLMVVAVDRGNPPLSGSAIVRVLVDDVNDERPAFLAPV---QTVSVLESLSVGSFVATVKATENYKGHNTKYTYKIAGIGKNAFTVHATSGLVTSTRLL---KSYER-----FNLTAVATDHGRPPLWGQAGLYVEVLDVNDHRPVFVLPPNGTVVNITEVMPVVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATSGIISTARALDRESQAVYSLILLASDQGQPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQSFSIPEHSPPGTAVGNVSGAVDADVGANAIV-YYFIAAGNEGNKFNLSRW------GLLVVLSDLDREVSPYYAIIVKASSNPNWTPAVTTGPEFDPSKDRTLREVRVYLE--DINDQWPVFT-----NHEYTAGVAVDAK----VGSELLQLEAVDRDVGNNSIVLYRILS 2440 HSP 5 Score: 116.316 bits (290), Expect = 2.707e-26 Identity = 134/487 (27.52%), Postives = 223/487 (45.79%), Query Frame = 1
Query: 313 QIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINA-----QTWIK-VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRG-KVDYEKKSNRYFLTRVKACDAGEDQ------LCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVIL--ERWEFTSSTFKLIIKK--PLDRELMSSINVSIVCRDNGIPV---KSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKL--TLISDN-DGFFEIDVFGNL--KLMKPLDRELRPFHPLVVLVTDN 1695
+I S D+ ++ LDRE + S IL + A +T I V I ++D+NDN P + + V EN+ G A D D+ N Y ++P + + S K+ G ++D E + F + +G D+ + + + + DVNDN P F+ +++++E N T++QV D DEG NG V++ + L R F + + G I L+ + + L + A D G LSS L V+D+N++AP+ P + ++E+ + V + TD D G +N EL S+F+ + +F+ +++ LDRE +S ++ I DNG P ++ ++ + V+DVN+ P L +E SY V +PE++ + +V ATD D N ++ +IS N DG F ++V L + PLDRE H L V +N
Sbjct: 290 RINARSGDITSTTLLDREAV---SQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPAWRDLPYAVTIVENTPGGTDIFTVSAADPDLNENGTLVYAIDPPNPFYRINAA---SGKIRTTGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPYALQVLEGLPANSTLFQVTATDPDEGANGNVTYSMTAA----LPRPDFQLDAATGLITTLVQLDREAVA-AYQLRLVATDRGTPALSSTTTLSLVVLDVNDNAPTF--HPAR-SAVSLMESVARDSVVISLNCTDADSG----LNAEL---SFFITGGNQDGQFSVGFRDGLVRTVVSLDRETKASYSLVIEAIDNG-PAGSRRTGTTTLDVLVLDVNDNRP-LFLEGSYEVSVPENVTRGAIILQVQATDIDEGINGRVWYRIISGNQDGNFLVNVSSGLISRGATPLDRETVALHALQVEAFNN 753 HSP 6 Score: 114.775 bits (286), Expect = 6.810e-26 Identity = 166/706 (23.51%), Postives = 308/706 (43.63%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYEN------SQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRL-ARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECK---LIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVAL----IMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELM--SSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLP-VNSSFAKVIATDKD----PDANLKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHL--YENLNGNSTIGQ---LKVSDPDSGLNGKVKF---LLIHAYTINDKLIKDKFFVNED-----DGTIFSIRPIDREVTSEIILRILLTDQGS----PSLSHE--EKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRES-----FIVNVQASDPDSPENANISFKLISAFKDNI-PVYLFTLELMTGNLGTN------GELSEGLYVLKMMASDNGRPPK 2388
V + + D+ND +P F + YE Q G +A+D D G N Y++ E + +P L +R V+ ++++ ++ + A D G L S L + + + DV+DN P+FL + + E + V +V D +EG N + + H+P + R F S G +Y+ + L+ + + + L +T RD+ P + +I ++D N+++P V + + +I EN+ T + + I +D D G N + L +++YF+I + + + + LDRE + + ++I+ +D G ++ + ++V+DVN+ P V + E+ P V +S V A D+D ++ ++ S + F ID G + + P+D E RP + L+V+ TD +PP T S L +++ + +L E SF L Y+ + + ++V+ P K+ +L+ + DK K + N + G I + +DRE T +L +L D G L+++ + + V DENDN P +F + SA + VRES + + A+D D+ N +S + + I P Y+ ++ +G + E + + +++A D G PP+
Sbjct: 1268 VSVHVADVNDVTPWF------LRSYEGPIDVSEGQPGPRIATFMASDQDSGLNGELEYSIIDGDPRNEFVISPADG-DLRVRRYVELDRETQAFYNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVFLNLPANASLSEAAAVLAIVSRVRASDANEGRN--CAALLQHSPTSFCNGERAFYADSQTGLVYVNRPLDRERVAE-YRLTLTVRDNPDNPSYARKDSDIMIVTILDENDNSP---VFSQVTYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAYFLI----DRDRGNVSMALGQGLDREGIPGGRLELTILVQDGG--RRNATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDTFGIDESTGLIVTVAPIDYETRPEYLLMVVATDQAPP-FHTASCELRVSLQN------ELDEKLSFSLAAYQAALSEAAVPGTVVVRVAAPQMKAPPKLPLPLAILVQKWH-EDKRHKQQESDNAELIAALQGEITTQAALDREATDSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSP----------EFE---AGSATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPR 1933 HSP 7 Score: 111.309 bits (277), Expect = 7.662e-25 Identity = 169/756 (22.35%), Postives = 307/756 (40.61%), Query Frame = 1
Query: 253 GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKS---NCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENS-QIGYSQELPLATDIDIG---PNSVHSYTLEPLLDLFELMYTPPRSLKLVLR-GKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFS-----VKSINGDIYLRKSLNSIDIPDKFHLAITARDHG-----AIPLSSECKLIF-NVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTS-------YFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSF-AKVIATDKDPDANLKLTL-----------ISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTD-NSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVY-LFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRP 2382
G+N + + + +I + + + LDRE + ++Q NA +++ + ++D+NDN+P F TS ENS +G S + A D D+G +V D F + S L++ +DYE + +L V A D + L +S+ + D + F + E V +V + + I E++ ++ S + ++ G+I + +L+ + D + L + +RD G A+ + ++ NV D N+++P + ++ E+ T + ++ TD D G+NG V+ + Y +I++ + T + K + I IV D G P +ST ++S+ V+DVN+ P Y V +L + A V ATD D N ++T I +DG + N+ DRE R + L+V+ D +PP S S + + + D+ND P L P + + E+L+ S + +K ++ G N K + + + K+ F V+ G + S R + + L + TD G P L + + ++V D ND+ P++ P + N + + +R IV V A D D +N + + + A + F + +G + T L S+ +Y L ++ASD G+P
Sbjct: 1534 GVNATLAYSLLGGSSAYFLIDRDRGNVSMALGQGLDREGIPGGRLELTILVQDGGRRNAT--VRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDTFGI----DESTGLIVTVAPIDYETRPE--YLLMVVATDQAPPFHTASCELRVSLQNELDEKLSFSLAAYQAALSEAAVPGTVVVRVAAPQMKAPPKLPLPLAILVQKWHEDKRHKQQESDNAELIAALQGEITTQAALDR-EATDSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPEF--EAGSATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNE--SGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPRSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQVTFRIESGGGDKLSIGPSDGIIRVAPGANI------DRETRAAYTLMVVAVDRGNPPLS--GSAIVRVLVDDVNDERPAFLAPVQTVSVLESLSVGSFVATVKATENYKGHNTKYTYKIA-------GIGKNAFTVHATSGLVTSTRLL--KSYERFNLTAVATDHGRPPLWGQAGLYVEVLDVNDHRPVFVLPPN-GTVVNIT---EVMPVVIR---IVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATSGIISTARALDRESQAVYSLILLASDQGQP 2252 HSP 8 Score: 53.5286 bits (127), Expect = 3.290e-7 Identity = 64/249 (25.70%), Postives = 110/249 (44.18%), Query Frame = 1
Query: 1720 SLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLI--SAFKDNIPVYLFTLELMTGNLGT--------NGELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
S ++IT+ + NDN P P + ++EN +++ Q+ +D D+G+ G+V +Y +D DKF ++ G I +D E T + ++ D G + +I L D NDN P+ F D S +A + +V V+A+D DSP N I++ ++ SA+ + ++G G ++ G L +MA D G PP +S T ++V+ N
Sbjct: 13 SARVHITLINENDNRPIFSLPLYNVSVWENATLGTSVVQVLATDLDAGVFGQV------SYHFSDD--SDKFSLDPASGLISVAAALDFEATPRFTVTVMARDGGGQETAGRVRINL--LDVNDNTPV--FQRD-------SYVGTARENDNSLTPVVRVRATDEDSPPNNQITYSILPTSAYSSYFSI------TVSGGYGVVTLARALDYEKIPGGTISLTIMALDGGSPPLNST-VTAIVEVFDEN 235
BLAST of Protocadherin 11 vs. Ensembl Sea Lamprey
Match: si:ch211-199f5.1 (protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]) HSP 1 Score: 177.178 bits (448), Expect = 1.184e-45 Identity = 153/671 (22.80%), Postives = 294/671 (43.82%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSR--LDREQLCDKS-NCILQMSAFINAQ----TWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL---EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSI---IVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDAN--LKLTLISDNDGFFEIDVF-------GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEP------TSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIF----SIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNE 2094
++EE P G ++G + D + G + + F + D + E D VS+R +DREQ C ++ +C+++ + +E++DIND++P F + VE E+ +G L A D+D+G N++ +Y L E + +LV++ ++D E++ + ++ A D G+ + I++ D NDN P+F + + +V + ED + + D+DEG NG V + + +P + RR F + G + L+ L+ ++ ++ ++I ARD G + + CK++ +V DIN++AP I + + G+ + E + V L+ V+D D NG V C L +F +L + + ++ LDRE M+ + + D G P + + ++ ++D N+ P + E+ + V A D D + N + ++ + + G + ++PLD E V D+ P T+ +++ I D NDN P + P L + + ++ D DS NG++ + ++ ++ F +N G +F S+ T ++ +++ D+GSP+LS I ++V D +
Sbjct: 35 LYEEQPAGTLVGRLSDDLQ---GRVAEHPSRHFRLMRRDDFS---LVHVEEADGTVSAREVIDREQQCGQAPSCVIRFDVLCTLPRGLFQLVHAEVELLDINDHAPDFARSEMHVEISESVALGTRVPLEGARDLDVGGNALRAYHLDENERFGLALRARTDGAKYAELVVKSRLDREQEGE--YTLQLTAWDGGDPPRSGTTLVRITVLDSNDNSPVFAQTSCNVTVREDATPGTVLLTLNATDVDEGPNGEVVYSFS-SPVDAEVRRLFQLDPKTGKLSLKGQLDH-ELNSEYEISIQARDMGPSSIPAHCKVLVHVEDINDNAPEIKLDFIMQSRGDTVFVSEGAAYESFVGLVTVSDIDSAENGLVACHLRGHPHFKLLPYRD----DYVVVTNSSLDREQMADYFLVLEASDGGTPPRVAARQFTVRLLDENDNEPRFHRSTYEASLLENNSPGAYVTTVTAWDADAEHNGMIAYNVVESEVAGASVSTYVSINPSSGAIYALRPLDYEAMTSLTFQVQARDDGVP-PLVTNATVSVRIVDENDNAPVVTHPPLRNGTGVVRLPRDAGLGYLVTVVRARDSDSEANGELSYRIVQGNE------RNLFRINRLGGEVFTNAASVTDAAASATRHSLV-VMVRDRGSPALSATAAIEIRVGAHGDGD 683 HSP 2 Score: 139.428 bits (350), Expect = 8.866e-34 Identity = 148/624 (23.72%), Postives = 263/624 (42.15%), Query Frame = 1
Query: 754 LNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDP-DANLKLTLISDND----GFFEIDVFGN--LKLM-----------KPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVN-VQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTN------GELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIV 2547
++ + + D+ND+ P F + V I E L V +DLD G N ++ ++ LA R + + ++ ++ L+ + ++ L +TA D G P S + V+D N+++P + T N + E+ T + + TD D+G NG+V S+ + ++ T KL +K LD EL S +SI RD G + + V D+N+ P +K+ D + S V ++ ++ + L +SD D G + G+ KL+ LDRE + LV+ +D P R + + + D NDN P+ T L EN + + + + D D+ NG + + ++ + + + +N G I+++RP+D E + + ++ D G P L + +++ DENDN P+ T P N + A ++V V+A D DS N +S++++ + N LF + + G + TN S + L +M D G P S A + I+V + G ET L +++ +A C L A+++V
Sbjct: 120 VHAEVELLDINDHAPDFARSEMHVEISESVALGTRVPLEGARDLDVGGNALRAYHLDENERFGLALRARTDGAKYAELVVKSRLDR-EQEGEYTLQLTAWDGGDPPRSGTTLVRITVLDSNDNSP--VFAQTSCN-VTVREDATPGTVLLTLNATDVDEGPNGEVVYSFSSPVDAEVRRLFQLDPKTGKLSLKGQLDHELNSEYEISIQARDMGPSSIPAHCKVLVHVEDINDNAPEIKL---------DFIMQSRGDTVFVSEGAAYESFVGLVTVSDIDSAENGLVACHLRGHPHFKLLPYRDDYVVVTNSSLDREQMADYFLVLEASDGGTP-PRVAARQFTVRLLDENDNEPRFHRSTYEASLLENNSPGAYVTTVTAWDADAEHNGMIAYNVVES-EVAGASVSTYVSINPSSGAIYALRPLDYEAMTSLTFQVQARDDGVPPLVTNATVSVRIVDENDNAPVVTHPPLRNGTGVVRLPRDAGL-----GYLVTVVRARDSDSEANGELSYRIVQGNERN----LFRINRLGGEVFTNAASVTDAAASATRHSLVVMVRDRG-SPALSATAAIEIRVGAHGDGDDGADETQPLDASMLAVMA--LGAACALTLAAVVLV 716
BLAST of Protocadherin 11 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 177.563 bits (449), Expect = 3.617e-45 Identity = 187/709 (26.38%), Postives = 315/709 (44.43%), Query Frame = 1
Query: 310 IQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQT-WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPP-----RSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVF------GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPEN-ANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPP 2385
I P + ++ VS RL+RE D+S +++ A A T V I + D+NDN+P+F T++ +EF E S+ A+D D G N + + + F + R L+ N+Y V A D G L S + I+I N N P FL+ S + + + + D D NG++++ + A R F V + G ++LR SL D F + + ARD G PLSS I +V + N +AP P + + EN +++A + TD D G NG + +++ + ++ + ++ +++ LD E N+S+ D G K+ +SISV DVN+ PP L Y VIPE+ P ++ + A D D +N +T+ S +DG E D+F G L LD E + + L V N P ++ +++ I+ +N+ P+ ++ +F + E+ + +G + +D D+G++G V ++L + F VNE G I +DRE + LR++ + GS +++++ VA + N+P P + ++ +S +A+ + +V V A D DSP SF + S F++ TG + L S LY L ++A D G PP
Sbjct: 485 FSIHPSTGEITVSRRLNRE---DRSGYAVKVRASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFV-VTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSV----VGGNASRRFDVDA-GGFLHLRASLAG-DAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPL---ELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGL---FDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSN-AVTMYSLDDG--EADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAF-NYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLF------GESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDP----PVFSSALYHGRVSEAAS----VGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRA----FSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPP 1155 HSP 2 Score: 157.918 bits (398), Expect = 4.379e-39 Identity = 165/639 (25.82%), Postives = 279/639 (43.66%), Query Frame = 1
Query: 307 VIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQ-TWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIP--------DKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIM-VTDGDKGNNGKVNCELSNTSYFVI----LERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT---LISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFH--LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREV--TSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSA 2157
V ++ P S ++ S LDRE + + Q +KV I + D NDNSP+F F E++ +G+ D D GPN+ +++L LD P + ++ + +++ E +S + +V+A D ++ I ++DVNDN P F + + E ++ V +V D D+G NG+V F + EN F V +G+I+ + L D +K+ +TA D G PLSS+ + N++ N +AP + + + T+ T L M D D+ NG++ +Y V+ R++ + F L ++ L + S +V++ RD G P S+ + ISV + N+Y P P +PE+ P SS A+V ATD D N + D G F+I G++ L+ LD E + L V D ++T ++I+++D+NDN P +L + ++ + EN +T+ + D DS N + Y+++D D F +N+ G + + +D E T E+ +R P H + V NE FP ++NF +S SA
Sbjct: 382 VFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQI-FSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSL---LDPSLPFSIHPSTGEITVSRRLNREDRSG--YAVKVRASDP---AWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTEN------FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRE----RYSTPVAATVRAGTRILDMSAVDPDRDVNGQI-------AYSVVGGNASRRFDVDAGGF-LHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGG-WQAKTECSGVSISVTDVNDN-PPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNA------VTMYSLDDGE-ADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAF----NYPDTFHYSTAQVHVQITGVNE---YFPRFVQREYNFVVSESA 977 HSP 3 Score: 155.606 bits (392), Expect = 2.595e-38 Identity = 158/562 (28.11%), Postives = 241/562 (42.88%), Query Frame = 1
Query: 727 AGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIP-LSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSY--FVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND--GFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNS-PPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNS---TIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESF-IVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELS---EGLYVLKMMASD 2370
AGE +L + + + D NDN P F + ED + V V D D G N +S+ + R +FSV G I SL+ + + + L +TA D G P LSS L+ V D+N+H P + P + + T V + D D G NG + LS ++ F + R + L + P D +L ++ VS D G P +S + ++++ D E+P P ED P ++ V A + L S + F +D G + + + LD E + + LVV D+ PP S L L + + DINDN P+ +S + + N+ TI L D DSG+NG+V Y+I D I + F VN + G I S+ +DRE + L + TD+GSP+ K+++ V DENDN P +T I S+ R F ++ V D D NA I+F L+ P F++ TG + + L+ Y +K+ ASD
Sbjct: 1 AGEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL------RGGDGHFSVNPSTGQIITTASLDR-EGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYV---AYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARAL--QGPRD-DLTLTVRVS----DGGAPPRSAVTTVTVRFRDAGEFP-RFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFS--AYLKLEVDVLDINDNAPEF---SSSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVD------YSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFT-----------QIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLD------PSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD 516 HSP 4 Score: 142.124 bits (357), Expect = 2.865e-34 Identity = 167/683 (24.45%), Postives = 282/683 (41.29%), Query Frame = 1
Query: 430 IKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGED-QLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL--TLISDNDG-FFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMT---------GNLGTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSNS 2436
+ V +E D NDN P+F E++ IG L ATD D G N++ SY L F + P + +++ +D E + + ++ V A D G L S L +++ DVND+ P FL V+ V +D D G NG + F ++ + A FSV G I+ ++L D L + D GA P S+ + D P P E+ TT+ ++ + G V+ L++ + + + + ++ + + LD E + + RD+G P S + + V+D+N+ P + +PE+ P + + A DKD N ++ ++I N G F ++ G ++ + LDRE + L V TD P T L I+++D NDN P+ + S H+ E+ + ++ D D G N + F L+ D + F ++ G I R ++RE S +++ +D P+ + + + V D NDN P + Q + I S E+ + V ASD D N + F + S +N V + E+ + G+ L++ +V+ M D GRPP S DAT+ I + N+
Sbjct: 12 VTVLVE--DENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVN---PSTGQIITTASLDREGRES--YVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGS-----ASAGFSVDPRRGVIHAARALQGPR--DDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAPGP---RSFSFREDQPPGTTITVVAARSSRRA--GPVSYHLASGGN--LGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPR-TIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVL-ISVTDENDNSPRFTQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLL------DPSL--PFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRF-------GQTAYYI--EFPEPSEGEALVARVSASDADDGANGQVFFFMRSQ-TENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAM--DRGRPPL-SSDATVTINIVVPNA 646 HSP 5 Score: 125.176 bits (313), Expect = 4.720e-29 Identity = 169/682 (24.78%), Postives = 278/682 (40.76%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPL--LDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLA-RRYFSVKSINGDI-YLRK-----SLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL---SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRD----NGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLK---LTLISDNDG-FFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLN-GKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENN---QFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYVLKMMASDNGRPPKHSKDAT 2406
I + + N +P+F + + EN G S ATD D G N Y++ LF++ S ++L G++DYE + + + V A D G ++IS+ DVNDN P+ + I E+ TV + D D N + ++ + + V + G + Y K ++ + + PD FH + TA+ H + +N + P + + + E+ V + TD D G +G V L S + F + E T ++I+ LDRE +S + ++ ++ G V L +++++ D N+ PP + + E V + V A D D + + S N G F I+ G + + PLDRE P + L V+ D P + T++ + + + D+NDN P LL +S + EN T+ L+ DPD N G F L+ +D + +F G + + RPIDRE E L + + D GSP L+ + L V D+NDN PS+ + N+ S FI +V+ DPD + N + P +F+ + T L + +EG + L + SD KHS T
Sbjct: 741 AIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRA---SGDVLLVGELDYETE--KLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYS-TAQVH------------VQITGVNEYFPRFVQREY---NFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEH------TGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVL--VNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVV-VALEDVNDNGPFLLT-SSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLG----SDPAWR-GYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN------PSEARDVRVHVNYFGSPFPG------GFIGDVRPRDPDISDRFNCDLT-------SGPFNVFSFQPNTCRLISQPRSAEGRFELSVRGSDG----KHSPATT 1362 HSP 6 Score: 122.094 bits (305), Expect = 3.892e-28 Identity = 169/693 (24.39%), Postives = 290/693 (41.85%), Query Frame = 1
Query: 307 VIQIKPESCDLFVSSRLDREQLCDKSNCI-LQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLD--LFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQII---ENTIGMTTVALIMVTDGDKGNNGKVNCEL-SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSIN---VSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL--TLISDNDG-FFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPP--NSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL 2331
V + P+S ++ V LD E + + S F ++K+ ++++DINDN+P+F + F + EN+ L A D D G N Y+ ++D + + P S ++ +D E ++ Y LT VKA D G + + IS+ D NDN P F + S + ED + V +V D DEG N ++F + P FS+ G+I + + LN D + + + A D A +S++ ++ V D+N++AP G I E + G VA + +D D G NG+V + S T F + S L + P +++N + D G P S+ +++I+++ N P E + + + + A D D D N ++ +++ N F++D G L L L + + V D P +SR T++ I++++ N P+ P L EN S++ ++ +D D+G+NG + Y+I F ++ G + + +D E L + D G + + + + V D NDN P+ + + I +A + ++ + A D DSP NA + L D+ LF L TG L T G L
Sbjct: 278 VFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVL-TAVDKDSGINGQVDYS---IIDGNIGNVFRVNPNSGEIRSVSTLDRENVAS-YELT-VKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIF-SAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLP--------FSIHPSTGEITVSRRLNREDR-SGYAVKVRASDP-AWTVSTDVTIV--VDDVNDNAPR------FGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAI---ISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAI------VYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLN-----ASDYYPVIPENAPSGTT----VLVMDAVDADSPSNAVTMYSL-----DDGEADLFVLNQKTGVLTTQGFL 922
BLAST of Protocadherin 11 vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0]) HSP 1 Score: 213.772 bits (543), Expect = 2.848e-56 Identity = 198/698 (28.37%), Postives = 310/698 (44.41%), Query Frame = 1
Query: 355 LDREQLCDKSNCI-LQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL--EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGD---------KGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL---ISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSIS---SSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG---LYVLKMMASDNGRP 2382
LDRE + S I + + V I I D NDN P F S E+S G ATD DIGPN +Y + + F+L PRS L +R +D E + + VKA DAG Q ++++S+ DVNDN P F K S I ED ++ TV QV V+D DEG NG ++ ++ + F++ S L K+ + + L +TARD G+ S+ ++ +I++N++ PS + + I E+ T V + TD D +GN G ++ S+ + + K LDRE ++ + + + G +S + +I V+DVN+ P + E+LP+ + AKV ATD+D N K+T + D F G + +PLDRE + + L V D+ P S++ A+ +TI+D+NDN P+ + + + EN S I ++ SDPD+G NG+V + +I N F ++ G I + +DRE + L I D G P + + VADENDN PI+ +N+ ++ I S +R++V V A+D D NA + + ++ F + M G L E++ Y L + ASD G P
Sbjct: 748 LDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPSRF-NISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQL---DPRSGILSVRSTLDRETIPSYTLV--VKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDN-----FTIDSTG--FVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQV---TSIPEDVAINTHVVKLNATDSDGTPLTFDIVEGNAGS---------------SFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKP-SQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGN------AFRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFA-----SNETSYGIDEGVSIGSRVAV-------VTATDRDEGSNAQVFYSIVRG-----DTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSP 1390 HSP 2 Score: 201.83 bits (512), Expect = 1.623e-52 Identity = 187/667 (28.04%), Postives = 303/667 (45.43%), Query Frame = 1
Query: 355 LDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENG--RVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILER-----WEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDN-DGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIV-NVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGT 2319
LD E K + +++SAF T I + D+NDN+P F + + YE+ +G A D+D+G N+ SY+L + Y S + V+R K +++++ + ++A D G + + I I DVNDNRP+F + + ED + + V D D G N R SF +T F++ ++ G + + +SL+ + + L ++ D G+ PL+ L+ NV DIN++ P + P+ + ++ ENT T V+ TD D NG + F I++ + ST + I K D E + ++++ RD G+PVK ++I + DVN++ P IPE + S+ V ATD D P L+ LIS N G F ID G++++ LDRE P + L V D SR++S + I + DINDN P P F + E+ + IGQ+ +D D NG V+ Y ++D D F +N G I +D E ++ ++ + D G+PS S + + V D NDN P QF S+ + ++ V V A+D DS N IS+ ++S ++ F ++ TG + T
Sbjct: 130 LDHET---KDSYTMRISAFDGKHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVS----GDTSYFTVDS-QGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNT------NHAFTLDAVTGVVTVSRSLD-FEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPP--VFSPS-AYQSRVKENTPAGTQVS---ATDRDSSTNGAL--------VFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGG-STSRSSSTRVTIALQDINDNSPIFQGPYVFRVSESSSPGHQIGQVAATDADDSSNGDVR------YALSDN--TDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPP----------QFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNEN----MAFAMDRFTGEITT 744 HSP 3 Score: 194.126 bits (492), Expect = 3.745e-50 Identity = 205/731 (28.04%), Postives = 326/731 (44.60%), Query Frame = 1
Query: 301 KGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSA----FINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVIL----ERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGF--FEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSF-HLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENN-QFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDA-TLYIKVYSSNSGFF 2445
KG I S + VSS LDRE S LQ+ A + + +V I + DINDNSP F+ +V E+S G+ ATD D N Y L D+F + + + + L+ ++DYEKK+ +Y +T V A D G S + + ++DVNDN P F K + + E+ V V D D G NG++S+ I EN F++ G+I R L+ I + L I A D + + + ++ D N++ P+ T ++ I E++ T V + TD D G NG V +Y +I ++ + L ++ LDRE + S + + D G P +S SI +SV+DVN+ P + I ED V+S+ +V DKD +N +TL +G F ID G + PLD E + L V D P S++ + + ITI ++NDN+P + P + E++ N+ + +L +D D + F ++ F +++ G I + +DRE T+ L + T+ GS S ++V D NDN P++ S + N I + A+ V A+D D ENA ++++L + D F + TG + T L + Y L++ A D+G+P + + A TL I + NS F
Sbjct: 523 KGAFNIDANSGSIRVSSELDRETTPSYS---LQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQ-GPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDVFSINTS---TGLITLKTQLDYEKKT-QYMVT-VTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMA----FAMDRFTGEITTRVPLDRETIA-SYSLTINADDGSLVRFMAATTVNISIADENDNQPTF----TGPSRFNISEDSPTGTRVGQLTATDRDIGPNGAV-------TYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTGFVLSKTPLDYETTAAYQLTVTARDGGSP-SKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSD---GTPLTFDIVEGNA------GSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAK----------VTATDRDEGENAKVTYEL--SVGD---TSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQF 1203 HSP 4 Score: 194.126 bits (492), Expect = 4.374e-50 Identity = 199/721 (27.60%), Postives = 331/721 (45.91%), Query Frame = 1
Query: 292 DQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQT-WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI---NHTPENRLARRYFSVKSINGDIYL-----RKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDAN--LKLTLISDND-GFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLI--SAFKDNIPVYLFTLE--LMTGNLGTNGELSEGLYVLKMMASDNGRPPKHS 2394
DQS G+I V+ RLDRE + + + ++ + I ++D+NDN+P F S+ +EN IG + ATD D G N+ +Y L + D + P L R +D E +++ + RV A D G+ + + ++IND+NDN P F + ++ + E+T + +VL D D G NGRV++ I NH F + S G I + R++L S ++L I+A+D G P S + V D N+++P T I E + VA++ TD D+G+N +V + +TS F I + L +KK ++RE + + ++I D G P+ ++ K +++ V DVN+ PP + + E+ ++S V A D D AN L+ ++IS ND F+I+ G + PLD E + + L V TD+ T + I + ++ND P + + + EN ++++ ++ SD DS +Y+I DKF +++ G I + +DRE+ S +++ +TD G+P LS+ + +K+ DENDN P + D ++ + + +SA SF + A+D D NA I++ L AF + TL L N T Y L + A D+G PP+ S
Sbjct: 1045 DQSSGLIS---------VAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELS-VGDTSKFEVNPATGLVTTKR-PLDREDQAS--YSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHG-------NAFRIDSTTGRITVVGVVDREALAS------YNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNET---SYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAI------NAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSK----YTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDS--------FGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKF----DSSSYSSSILENSAP-----SSFSFKLAATDADEGTNARITYNLSRNDAFMIGASSGVITLAQPLDRENKST--------YDLAIQARDHGTPPQAS 1701 HSP 5 Score: 188.348 bits (477), Expect = 2.402e-48 Identity = 199/672 (29.61%), Postives = 307/672 (45.68%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKV-DYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELS-NTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL--TLISDNDGF-FEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRP-IDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKV 2421
+ I + DINDN P F +++ EN+ G ATD D N + + D + ++T S ++ K DYE K+ RY LT V+A D G + I I DVND+ P+F N S +I E T + TV V DLD G GR+ + + + + F++ + +G I + L+ P + L + ARD G+ SS ++ + DIN+++P I P + ++ E++ + + TD D +NG V LS NT F I +ST + +K LD E + V++ +D G P +S+L + + V DVN+ PP + E+L + V ATD D AN K+ +++S N+ F +D F G + PLDRE + L + D S + +NI+I+D NDN P P+ F++ E+ + +GQL +D D G NG V + +I N F ++ G I S+R +DRE L + +D GSP S I + V D NDN P + E + F+ I A+ S ++ V+ D D N I+ L DN FT++ TG + + L + Y L + A D G P SK AT +K+
Sbjct: 362 LLINVNDINDNPPVFSPSAYQSRVKENTPAGTQVS---ATDRDSSTNGALVFGIIKGND--DGVFTIDGSTGIISIAKSPDYENKT-RYDLT-VQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRL----ISGNVKGAFNIDANSGSIRVSSELDRETTP-SYSLQVEARDGGSTSRSSSTRVTIALQDINDNSP-IFQGPYV---FRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDVFSI------NTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVR-FMAATTVNISIADENDNQPTFTGPSRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGN------SFQLDPRSG-ILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRF-----EKSLFSGEIREDAS----VHSTVLQVKVEDKDEGSNGAITLSLSGEGSDN-----FTID-STGFVLSKTPLDYETTAAYQLTVTARDGGSP---SKSATAQVKI 985 HSP 6 Score: 158.688 bits (400), Expect = 3.885e-39 Identity = 168/631 (26.62%), Postives = 291/631 (46.12%), Query Frame = 1
Query: 355 LDREQLCDKSNCILQMSAFINAQTWIK---VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL-EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI-NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL---SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFH--LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPD 2214
+DRE L + I + + W+ V I + D NDNSP F E IG + ATD D G N+ Y++ F + ++ VL K + +++ + ++A D G + S L + +NDVNDN P+F + + E++ + +V V D D G N + + I + E R F + S +G I L+ + ++ L +TA D +++ + VI++N+ P+ + + EN+ T+ +++ V+ D+ + G ++ + ++ F I +R S+ LDREL+S + + D G P S L ++I ++D N+ P + I E+ +S K+ ATD D N ++T +S ND F G + L +PLDRE + + L + D+ P + +S+ + +T+ DIND+ P L+ +S + EN + + ++ SD D+GLN ++ F L+ N+ K F ++ G I + P+DRE + LRI + D+G+PSLS +++ V DE+DN P + + ++N +IS S R + IV V A D D
Sbjct: 1266 VDREALASYNLTISAKDSGV--PPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAI-----NAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKR-----FKINSTSGVIMTTTPLD-FEEKSQYGLEVTATDS---KYTAKTNVTIRVINLNDITPAFTQQ---NYTASVRENS--PTSTSVVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIIST------ADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTP-PQASSITIRVTVIDINDHRP-LINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLS----NEH--KSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRF-----QPTEYNVTISESLP----RGASIVQVTARDID 1852 HSP 7 Score: 158.688 bits (400), Expect = 3.918e-39 Identity = 187/718 (26.04%), Postives = 321/718 (44.71%), Query Frame = 1
Query: 280 MTSHDQSKGVIQIKPESCDLFVSSR-LDREQLCDKSNCIL-QMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELS--NTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT---LISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSF--HLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHS 2394
M +DQ G+ I + + + R DRE +L Q +A + V I++ D NDN+P+F S+V EN+ + ATD D G N+ +Y+L + F +M + ++ V +D+E K + + R+ A D G+ L I+++DVNDN P F + ED + V Q+ DLD G N R+S+ + + YF+V S G I + + + + + +A+ A+D G+ S + + ++D+N++ P V + + E+ + + +D D GNN + + NT++ L+ + T + + + LD E SS + + D G P + + I+V D+N+ PP + + E+ P + +V ATD+D N L + ++DG F ID G + + K D E + + L V D P T+ + I I D+ND+ P + P+++ + E+ ST+ + +D DSG G++++ LI +K F ++ + G+I +DRE T L++ D GS S S ++ + + D NDN PI+ P F S SSS I V A+D D N ++ + A DN V F++ TG + +L + Y++ + A D G P + S
Sbjct: 4 MDGNDQ--GMFTIDSSTGSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAA-QVAIVTATDRDSGTNAAITYSLFSGENKF-MMNSKTGEIRTVT--PLDHETKDS--YTMRISAFD-GKHTTFVPL---ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTS-----YFTVDS-QGVIRTKGAFDR-ETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRP---VFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLD-----AVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT---QVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTA-QVTIFIEDVNDHSP-VFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGN------VKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPY----VFRVSESSSPGHQ------IGQVAATDADDSSNGDVRY----ALSDNTDV--FSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSS 667
BLAST of Protocadherin 11 vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9]) HSP 1 Score: 203.756 bits (517), Expect = 4.326e-53 Identity = 188/693 (27.13%), Postives = 329/693 (47.47%), Query Frame = 1
Query: 346 SSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPL--LDLFELMYTP-PRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVK---PTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFA-KVIATDKDPDAN--LKLTLISDND-GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDN-SPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELS---EGLYVLKMMASDNG 2376
++R+DRE S LQ+ + I V +++ DINDN P+F + + E+ + + + ATD D G N YT+ F L T P L + K ++++ ++ + A D G L +NI+I D ND+ P+F + + I E+T+ ++ +V D D G NG + + I+ + + F + S G I +++L+ ++ + + + A D G + + NV+D N+++P + + P G+K EN++ T +A I+VTD D N + +++N + EF F + ++KPLDREL+ N+++ D G+P +STL + I V DVN+ PA +Y +L N S+ ++ ATD D N + ++ ND G+F++D G + KPLDRE + + D+ S P +T S + +TI D NDN P+ ++ + + E + +T+ Q+ +D DSG NG++ + + + +D + F +N G +++ +DRE S +L D G P L K+ L ++D NDN P++ +P ++ SI + ++ V A+D D NA IS+ +I + F+++ TG + T L E + L + A D G
Sbjct: 54 TARIDRETTTQIS---LQLRTLNPSNQPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDW--DAIQSNSIFDLDSSTGVIRTKQNLD-FEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCF-KVEFLGFYF-IQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAF-TSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAP--KTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEI----SSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVF-YPV----EYFASIMENEP-----PGKLLQVTATDADEGTNAVISYDIIGGNNNG----NFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGG 717 HSP 2 Score: 154.836 bits (390), Expect = 4.970e-38 Identity = 166/652 (25.46%), Postives = 280/652 (42.94%), Query Frame = 1
Query: 196 VGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNC---ILQMSAFINAQTWIK----VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELM----SSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDAN----LKLTLISDNDGFFEID-VFGNLKLMKPLDRELRPFHP----LVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDRE-VTSEIILRILLTDQGSPSL-SHEEKIVLKVADEN 2085
VG ++ H + S+ K ++ + S S+ + S + RLDRE+L + I+Q A N T + V + + D+NDN+P F + + E S G A D D G N+ Y+L + + + + +L L +D E S+ + VKA DA L S + I++ D ND RP+F + + +V I ED + V + D D G+NG + + I++ LA F V+S G + + KSL+ + + L ITA+DHG IPLSS + NV+D+N++AP +P + EN V +D D G N + + + + + + S+T ++ +D E M S + ++ D G P ST KSI++ V D N+ P V P SS + T +DPD N + ++IS N+G+F + G L+++ + P +P L + +D P+ +T ++ I + EN +++ + + P S LNG +++ L + K F V + G + + R IDRE + + L + D+ PS + + + V D N
Sbjct: 1069 VGTLVAHALDHSR--------TKDIVYSLIS---SESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGM-DKFFINSSTGELHLSKTLDRETTSSYNLV--VKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISN---GNLA-AMFDVESATGRLIVAKSLD-FETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPV---TLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQT---PSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGF-------VSPPAAAAGSSLNVMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQI-----PDNPTIYQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSS------KGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677 HSP 3 Score: 145.591 bits (366), Expect = 3.476e-35 Identity = 188/760 (24.74%), Postives = 327/760 (43.03%), Query Frame = 1
Query: 205 IIGHIIKDSK---LAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL-----EPLLDLF--ELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDI-----PDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL-SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDAN--LKLTLISDN-DGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSP-PNSRTTSLALNITISDINDNIPKL-LEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVT----SEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG--LYVLKMMASDNGRPPKHSK 2397
++G ++ ++ L G NGL + QL TS+ ++G++ I S + ++ +L + +L + Q + IN + PKF +S+V + + Y +A D D G N Y++ E L +F +Y +SL L+G D V+A D G + + + I I D ND+R +F+ + E++ V ++ LD + + + + +F+V +G I R L+ ++ + + + A + + +I V D+N++AP + + + E ++ + V I D D+G+N K L S T ++++ SST +L + K LDRE SS N+ + D + I I+V D N+ P E Y V I ED + S + A+DKD N +K ++ + N F+++ G L + K LD E + L + D+ P S T ++ +N+ D+NDN P +P + + EN+N +G+ SD D+G N + A+++ + F VN I +I ID E L ++ TDQGSP LS + I ++V DENDN P + P ++AA S+ ++ + A DPD N +++ +IS F L TG L ++ + +Y L + ASD G+P + ++
Sbjct: 858 LVGQVVYNAAAVDLDAGKNGLVRYQL---TSN--AEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLSIN-HPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIFPGGKLYIR-KSLLQALKGSYDL----------IVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLIS------SESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAP-VFSRAVYA--ITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTG----MDKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFP-ESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVL--DVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHI------AFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSP-----------PAAAAGSSLN---VMTITAEDPDRNSNGKVTYSIISGNNG-----YFNLHPSTGQLQMIHQIPDNPTIYQLTIQASDGGQPSRQTQ 1559 HSP 4 Score: 138.272 bits (347), Expect = 6.602e-33 Identity = 145/549 (26.41%), Postives = 258/549 (46.99%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPL-ATDIDIGPNSVHSYTLEPLLDL--FELMYTPPRSLKLVLRGK-VDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL---SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLIS-DNDGFFEIDVFGN-LKLMKPLDRELRPFHPLVVL--VTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQL----KVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSP 2037
V I++ D+NDNSP F ++ E +Q G S L L ATD D G N SY++ DL F++ + LV K +D E+ S+ + A D G + ++I D NDN+P F+K + I E + TV QV D+D G+NGR+++EI+ + + F + + G ++ + L+ + + + A+DHG L S K+ + DIN++AP + P + I+EN + + TD D+G N ++ ++ +N F I SST + LD E+ ++ I +D G + ++++V++ + P E + E++P + +V AT KD + ++ ++S D F +D G +K+ +DRE + + L V+ V P +++ T +NI + D NDN P+ ++ + +++G +GQ+ D D+G NG V++ L T N + + ++N G I R + ++ +++L +D GSP
Sbjct: 411 VLIDVTDVNDNSPAFTSNAYTANISELAQNG-SYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQS----GLVTTAKPLDREQVSS--VTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSS--DAQVNGLFELNTQTGVLWTKSQLDR-ETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAP--VFYP-VEYFASIMENE-PPGKLLQVTATDADEGTNAVISYDIIGGNNNGNFSI------DSSTGVISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNGSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQAT---VNIEVLDRNDNAPQF---STSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQL----TSNAEGL---LWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSP 926 HSP 5 Score: 114.39 bits (285), Expect = 1.436e-25 Identity = 126/470 (26.81%), Postives = 205/470 (43.62%), Query Frame = 1
Query: 1069 PLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELS---NTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVF------GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL----LEPTSFH---LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSI-----------RPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPK 2388
P+S + + V DIN++ P PTL +I E+ TT + TD D GNNG V+ ++ NT+ F + T ST +I KKPLDRE ++I D G P I+I+++D N++ P I E+ S +V A D+D +N + D D +F G ++ + LD E++ + V+ +D P S+ + I + D NDN P+L L P + EN N+ I + V+D DS N + + + N DD F + +P+DRE+ L + +TD+G PS S +++ V D NDN P +T +N + +IS L+ S+++ + A+DPD +N +S+ I+ D + F ++ +G + T L + + A D+G PK
Sbjct: 78 PISVQVQ----VDDINDNEPRF---PTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVP-SKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKI----------------TNGDDEGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFT-----SNAYTANIS----ELAQNGSYVLQLNATDPDEGDNGTVSYS-ITGGND---LGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPK 510 HSP 6 Score: 113.235 bits (282), Expect = 3.031e-25 Identity = 170/678 (25.07%), Postives = 284/678 (41.89%), Query Frame = 1
Query: 418 AQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL---SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIAT------DKDPDANLKLTLISDNDGFFEIDV-FGNLKLMKPLDRE--LRPFHPLVVLVTDNSPPNSRTTS---LALNITISDINDNIPKLLEPTSFHLYENLN-GNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHS 2394
A+T + V + +++ DN P F Y + YEN G AT D N SY + D L + + G +D E+K+ +L V A L ++ +NI + D NDN P F + V I + Q VY DLD G+NG V +++ E L + S +G I L + L D ++ + + A D G+ P S + ++ NH P + + ++ + ++ D D G NG++ + + F I KL I+K L + L S ++ + D G+P S ++I + D N++ +L V ++ + NSS ++ T D ++ +LIS ++ F +DV G + LDRE ++ V ++ + N T + +T++D+NDN P L+ S + ++K D D G N K + L+ + DKFF+N G + + +DRE TS L + TD + +L KI + V D ND P+ FP + + +I+ A + S ++N+ ASD D +N I + + + N+ +F +E TG L L + LY L + A D+G P S
Sbjct: 722 AKTAV-VNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKD--KNGSISYAIVSG-DPTNLFLVDSTGGIIKINGDMDREEKAQ--YLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLW-----INSTSGVIKLARKLTDGD-ETQYTVQVLASDSGSPPQHS--TMTIHITLSINHPPKFTLSSYV---THVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIFPGG-------KLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHR-SLFVNNTFRFAVAE---NSSPGTLVGTLVAHALDHSRTKDIVYSLIS-SESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGM------DKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPV--FPESD---YTVNITEDA----LIGSLVINLNASDKDIGQNGLIKYSISNG---NLAA-MFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSS 1351
BLAST of Protocadherin 11 vs. Ensembl Nematostella
Match: EDO48237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF4]) HSP 1 Score: 184.496 bits (467), Expect = 5.467e-47 Identity = 205/765 (26.80%), Postives = 339/765 (44.31%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQ------LFDMT--SHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCE-LSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPD-ANLKLTLISD--NDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVR-ESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGL---YVLKMMASDNGRPPKHSKDATLYIKV 2421
V E+ VG ++ + S GSNG+ + L T S DQ GVI K F+ R + D L+ ++ + I ++D+NDN P FE + + E+ IG A+D D G N Y + S + + K+D EK + +V+A D G + + + I++ DVND P F K S I ED +NQ V V D D+G NG V FEI + +FS+ ING++ +++ L+ ++ F+L +TA+D G L ++ + +ID+N++AP + + + I EN + D D G NG++ + N F I E +T + IK+ LDRE + I RD G+P K I+I+++D+N+ PP E + I E+ +S +V A D D N+ +++S +D F I+ G + L L+ + H V V+ + S T + +N+T D N + P+ + S + E+ + +++ + +D D+G N K+ +Y+I + +F V+E G I + +DRE + TD G P L + + + +AD NDN+P++ PS E + R +R ++ V ASD D +NA I + S + FT++ G + T L Y L ++A+D G PP A++ +KV
Sbjct: 29 VSEDAEVGTVVA-TVSASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGVITTKRGLDREFLDRHFFRVKAEDGGEPSLE--------GYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSGAVTVMKKLDREKVPT--YTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGND----MNFFSINRINGEVRVKQKLD-YEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFV---SSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSINE------NTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQGLITLSCTLNYNTK--HVYVFSVSASDGMLSSTALVYVNVT--DSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKI------SYSI--ATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYE----------AKVREDIRPGGRVIEVSASDADIGKNAQIIYSFAS---NGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQ---ASVKVKV 740 HSP 2 Score: 176.792 bits (447), Expect = 1.316e-44 Identity = 178/670 (26.57%), Postives = 296/670 (44.18%), Query Frame = 1
Query: 463 DNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKS-NRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFH--LYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESF---IVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
+N P+F E++++G A+D D G N + Y++ P +L Y + V+ K +++ +R+F RVKA D GE L ++L I++ DVNDN PIF + + I ED + V V D D G NG V + I ++ + A FS+ ++G + + K L+ +P + L + A+D G P S+ + ++D+N+ P K I E+ V + TD D+G+NG+V E+ N F + R ++ +K+ LD E++ N+ + +D G P ++ I++IDVN+ P +IPE+ V F +V A DKD N ++T ND F I+ G + + + LDRE P + D P T+ + IT+ DINDN PK + +H + EN +++ Q+K DPDSG V Y+I D+ F G I ++ + + +D LS + + V D N + P F S +A + S ++ V A+D D+ NA IS+ + + + F+++ TG + T G L Y ++ A+D+G P +K + +YI + N
Sbjct: 15 NNPPQFSRLQEDASVSEDAEVGTVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGVITTKRGLDREFLDRHFF-RVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSA---FSIGEVSGAVTVMKKLDREKVP-TYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVY---SATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINR-----INGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTA-QITITLLDINDNPPKFSQ-EEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVV-------YSIVSSSGHDRCFRINPQGLITLSCTLNYNTKHVYVFSVSASDG---MLSSTALVYVNVTDSNTHAP------------EFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPE------FSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAK-SFVYIHIADVN 640 HSP 3 Score: 152.14 bits (383), Expect = 4.885e-37 Identity = 161/653 (24.66%), Postives = 285/653 (43.64%), Query Frame = 1
Query: 187 EVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINA----QTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL-----TLISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFP 2112
++P K IG + + + +G N + + + D I S + V +LDRE++ LQ+ A + V I ++D+ND +P+F + E+ + ATD D G N + + D+ + ++ ++ K+DYE F V A D G+ L ++ ++I++ DVNDN P F+ + I E+ + Q Y+V D D G NG ++F +N L FS+ G I +++ L+ +P KF I ARD G ++ ++DIN++ P + I EN+ T+V + D D G V +S++ + +R + + + L+ S+ D + S+ + ++V D N + P K + ED + +S V+ATD+D +N K+ TL+ + F +D G +K LDRE + V TD+ P + S I I+D+NDN P L+P+ + E++ + ++ SD D G N ++ I+++ N + F ++ G I +++P+DRE E L ++ TDQG+P K+ + + D D+ P++ P
Sbjct: 136 DIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSGAVTVMKKLDREKV---PTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDM-NFFSINRINGEVRVKQKLDYEMIG--VFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFM---QNDLP---FSINENTGGISIKEELDREKVP-KFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEY---HTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGH----DRCFRINPQGLITLSCTLNYNTKHVYVFSVSASDGML---SSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPE----FSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVY-IHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQI----IYSFASNGDG-QGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKP 755 HSP 4 Score: 128.642 bits (322), Expect = 8.434e-30 Identity = 127/463 (27.43%), Postives = 213/463 (46.00%), Query Frame = 1
Query: 433 KVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINH-TPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIK--KPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKD--PDANLKLTLISDND-GFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHL 1797
++ I ++DINDN PKF + ENS+ G S A D D GP +V Y++ P+ L + L ++Y K F + A + L S + +++ D N + P F + + S + ED L +V VL D D G N ++S+ I PE FSV G I SL+ + D + +TA DHG L ++ + ++ D+N++ P + +KP+ + ++ E+ V + +D D G N ++ ++ + FT + + II+ KPLDRE + +++V D G P + + + DV + PP + +P Y V +PED P S V A +D P+ + +++ N F+I+ G ++ + LD E + + L V T SP + TT + + + DINDN P L +FH+
Sbjct: 427 QITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNV-VYSIVSSSGHDRCFRINPQGL-ITLSCTLNYNTKHVYVF-----SVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPE-------FSVDETTGVIKTAGSLDREKV-DTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDP-VFLKPSY--EAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGD----GQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFE-KPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMKLDYETQSEYRLTVRAT-LSPFFTETTVM---VYLKDINDNTPVL---EAFHM 859
BLAST of Protocadherin 11 vs. Ensembl Nematostella
Match: EDO34815 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN97]) HSP 1 Score: 177.948 bits (450), Expect = 7.940e-46 Identity = 198/765 (25.88%), Postives = 331/765 (43.27%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMT---SHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMS--AFINAQTWIKV-FIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELP---LATDIDIGPNSVHSYTLE----------PLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLV-----VLVTDNSPPNSRTTSLAL-NITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPP 2385
VFE PVG + D +G N + +T SH + V ++ + V+ LDRE + D N + + ++T I + + I+D NDN PKF + + ENS G ++ +ATD DI N+ Y L P + +PP SL D+E+ +N F V A D S + I + D NDN P F+ + I E + Q+V +V D D G NGR+ F IN E + F + +G + + SL+ + + L ++A D P + + D+N++ P KP + E + + TD D+G+N + +S + S+T + I +PLDRE + + ++ RD G ++S + ++++ + D N+ P + + PV + V A D+D N +T F + GN+ LDRE + + LV + VTD+ ++ TS AL NI+++D NDN P+ + S + EN+ + + + D DSG+N ++ + L T D + F + G I + I+RE + I +D+G+P LS + K+ + V D NDN P++T + + ++S A F+V V A+D D N ++++ ++ + +FT+ TG + T G L S+ Y L +MA D G P
Sbjct: 123 VFENSPVGTSL----LDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKVSNHGT-IEVAGNLDRE-VNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIMATDRDIESNADVRYRLNGSDSIQFAVNPRTGVITTRVSPPPSL--------DHERTTNYTF--HVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGK-----FEIGRSDGVVRVSGSLDR-EAKAVYVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKF-TKPAF--NVDVSEGVAVGSVIVNATATDPDQGSNAAITYSMS-------YPGFAINSNTGSVTITRPLDRETKQAYSFTVHARDGG-GLESNV-AVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTYAILILPFIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGV--TQFTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSL----TGGDGV----FSIEPSTGQIRLQKAINREAKENYHVTITASDRGTPVLSSDAKVHVHVLDVNDNPPVFT-----SRVYERTMSEGNAAAG---EFVVQVNATDADVERNGHVTYTIMHG-----ALGMFTINETTGVIRTQGVLNRESKDFYTLIVMARDQGAVP 830 HSP 2 Score: 146.747 bits (369), Expect = 6.567e-36 Identity = 147/600 (24.50%), Postives = 263/600 (43.83%), Query Frame = 1
Query: 355 LDREQLCDKS-NCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLD-LFELMYTPPRSLKLV-LRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMS-------SINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTL-ISDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENL--NGNSTIG----QLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPI 2100
LD E+ + + + I A ++ +V I ++D NDN+P+F +S E + IG S A D D G N +++ + FE+ RS +V + G +D E K+ ++ V A D + +++ DVNDN P F K +V + E + + D D+G N +++ +++ F++ S G + + + L+ + + + ARD G L S + + D N+++P PT+ + +I+ T T V + D D GNNG V +Y +++ + T + LDRE S +N+S+ D+G+ ++ ++ISV D N+ P + E++PV + V A D+D N ++ ++ DG F I+ G ++L K ++RE + + + + +D P ++ +++ + D+NDN P +YE GN+ G Q+ +D D NG V + ++H F +NE G I + ++RE L ++ DQG+ I + V D+NDN PI
Sbjct: 292 LDHERTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGKFEI----GRSDGVVRVSGSLDREAKA--VYVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITYSMSYPG--------FAINSNTGSVTITRPLDR-ETKQAYSFTVHARDGGG--LESNVAVNVEIGDENDNSPQF---PTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHV-------TYAILILPFIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVT--DHGVTQFTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTGGDGVFSIEPSTGQIRLQKAINREAKENYHVTITASDRGTP-VLSSDAKVHVHVLDVNDNPPVFTS----RVYERTMSEGNAAAGEFVVQVNATDADVERNGHVTYTIMHG-------ALGMFTINETTGVIRTQGVLNRESKDFYTLIVMARDQGAVPYMDFGTIDVHVIDKNDNTPI 850 HSP 3 Score: 135.576 bits (340), Expect = 2.101e-32 Identity = 152/624 (24.36%), Postives = 272/624 (43.59%), Query Frame = 1
Query: 556 DIDIG-PNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLI--FNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL--TLISDNDGFFEIDVF-GNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGL--------YVLKMMASDNG 2376
D ++G P S +TL+P + + R+L+ +++ Y LT + A D G + ++I + D+NDN P+F N S + E++ + ++ V D D G+N V++ + + L R V S +G I + +L+ ++ D ++L ITA D G +P+S I ++D N++ P G+ + + + + IM TD D +N V L S++ F + R T ++ LD E ++ ++ D +L + I V+D N+ P + I E + S A+V A D D N ++ ++ S ++G FEI G +++ LDRE + + L V D S + R + +T+ D+NDN PK +P + + E + S I +DPD G N + + + + F +N + G++ RP+DRE + D G L + +++ DENDN P FP+ Q+ + R V + ++ V A D D N ++++ ++ + F + TGN+ T+ +L YVL + +D+G
Sbjct: 45 DGNVGDPRSNSDFTLDPNTGMIKTA----RNLE---------RQQTFSYNLT-IGAADHGLPSFSATTRVSIVVGDLNDNNPVFNPTNYSTTVFENSPVGTSLLDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKV-SNHGTIEVAGNLDR-EVNDFYNLTITATD-GGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIMATDRDIESNADVRYRLNGSDSIQFAVNPRTGVI--TTRVSPPPSLDHERTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGKFEIGRSDGVVRVSGSLDREAKAVYVLNVSAIDGS-YSPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITYSMSYP----------GFAINSNTGSVTITRPLDRETKQAYSFTVHARDGG--GLESNVAVNVEIGDENDNSP--QFPT---VQYQTDVID---RTPV-GTIVLAVNAEDRDVGNNGHVTYAIL--------ILPFIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHG 619 HSP 4 Score: 131.724 bits (330), Expect = 3.325e-31 Identity = 185/763 (24.25%), Postives = 320/763 (41.94%), Query Frame = 1
Query: 244 GSNGLNKCQLFDMTSHD-QSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMS-AFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNS--VHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLN-ISINDVNDNRPIFLKCNESVRIMEDTQLN---QTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKS-LNSID--IPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSII---VKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVS----DPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTS-----EIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVN-----VQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNL----GTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
G+NG + D D +S + P + + + L+R+Q + I + +V I + D+NDN+P F T++ +ENS +G S ATD D G N+ +S T LF + + + G +D ++ N ++ + A D G + + + + I D NDN P F + I E++ Q ++ D D N V + +N + + F+V G I R S S+D + + A D S +++ +V+D N++ P I ++ T+ I + +VA + D D G NG++ +++ S ++E S + + LDRE + +++ D + ++++++ DVN+ P +P++NV + E + V S ATD D +N +T GF G++ + +PLDRE + + V D S ++A+N+ I D NDN P+ PT + + ++ + +G + ++ D D G NG V + ++ F + D G I + +DRE S +L + +TD G + + + V D NDN+P QFN S S+ +V E+ V V A D DS N+ I + L +F++E TG + N E E +V + ASD G P S DA +++ V N
Sbjct: 34 GANGDVDYSIVDGNVGDPRSNSDFTLDPNTGMIKTARNLERQQTFSYNLTIGAADHGLPSFSATTRVSIVVGDLNDNNPVFNPTNYSTTVFENSPVGTSLLDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKVSNHGTIEVAGNLD--REVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIMATDRDIESNADVRYRLNGSDSIQ-----FAVNPRTGVITTRVSPPPSLDHERTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQ------SVARVTANDPDSGLNGRIFFSINSGSE----GKFEIGRSDGVVRVSGSLDREAKAVYVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKF-TKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITYSMSYPGFAINSNTGSVTITRPLDRETKQAYSFTVHARDGGGLES---NVAVNVEIGDENDNSPQF--PTVQYQTDVID-RTPVGTIVLAVNAEDRDVGNNGHVTYAILIL----------PFIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQP----------QFNQSEYSA----TVLENMPVGTKVTMVTARDEDSGINSQIMYSLTGGDG------VFSIEPSTGQIRLQKAINREAKENYHV-TITASDRGTPVL-SSDAKVHVHVLDVN 740
BLAST of Protocadherin 11 vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751]) HSP 1 Score: 180.644 bits (457), Expect = 8.392e-46 Identity = 184/682 (26.98%), Postives = 308/682 (45.16%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQ----IGYSQELPLATDIDIGPNSVHSYTLEPL-LDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGN---KCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELS---NTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDND-GFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLN-GNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGS-PSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELS---EGLYVLKMMASDNGRPPKHSKDATLYIKVY 2424
V I ++D+ND P F + E+SQ IG+ A D G N+ Y++ D L+ + + L L+ +VD+EK + Y V+A D G L N+ I++ D+NDN P F + VR+ EDT + T Y V V D D G GRVSF + P F++ S G + L K ++ + + L + A+D G+ P SS L V+D+N+++ P GN ++E T + + ++ TD D G NG+++ +TS F + K+ IK LDRE + N+ ++ D+G P +S+ + + V DVN+ P + + E+ PV + V A+D D +N +T D F +D G + + LDRE + + ++ TD + R + + + D+ND PK + S + E+L G+S + + D G N + ++++ F +N+ G + + P+DREVT IL ++ +D+G SL I + V D NDN P++ N+ F + +L + S + V A D D +N + +K+++ D F + TG + T L YVL++ A+D G+ K K + + +Y
Sbjct: 689 VNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVH----AISRDKGTNAEVVYSISKGNTDNIVLINS---TGTLYLQSEVDHEKIPSLYLT--VQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGT-----LFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYS------PVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRNGG-------KIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGG-SSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAG--------PKAFSLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFI------NETTF--KTVPEKLPI-GSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGT----FKINETTGVISTLRALDFEVTNRYVLRVSATDMGK--KQQKTSYQLVTIY 1319 HSP 2 Score: 180.644 bits (457), Expect = 8.537e-46 Identity = 191/652 (29.29%), Postives = 299/652 (45.86%), Query Frame = 1
Query: 355 LDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKF-EYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP--LLDLFELMYTPPRSLKL-----VLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI-NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAI-PLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL-SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDG-------FFEID-VFGNLKLMKPLDRELRPFHPLVVLVTD-NSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQF--NFSISSSAARLSVRESFIVNVQASDPDSPENANISF 2241
LDRE++ + I++ S + T V + + D+NDNSP F TS + +EN + + Q+L +A D D G NS SYT+ + ++F+L+ L V + +++ ++ + A D G L L+I++ D NDN+P F + S I E+ + ++ QV D D G N + + I H+ + F + G I L+ + + + + A D G+ LSS + V+D+N++ P I V TLG Q+ EN T VA + V+D D G NG+VN L YF + +++ + + + + LDRE + VC D G P ++T KS I+V DVN+ P + E+ VN+ A V A D+D +N +L N +F ID G + LDRE P L VLV D SPP S S+ +N+T D NDN P + + + L+EN S + QL DPD G N + + ++ T FF++ G + + R +D EV S ++ TD G S + + L D NDN+P++ PS + ++ N I S +L +A D DSP+ A F
Sbjct: 20 LDREKVSAYNLTIVEFSTPPKSYT---VLVYVQDLNDNSPSFVRGTSAKLVVFENDK-DFRQKL-IAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAI----FGIHPTTGVIVNNVRLD-YEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSM--KFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLT--DSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNT--------PFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGGGRSCNATVHVSL--TDLNDNQPVFD-PSSYSVEYFENTRIGQSICQL----------KAIDRDSPKFAITRF 636 HSP 3 Score: 167.548 bits (423), Expect = 8.228e-42 Identity = 194/749 (25.90%), Postives = 320/749 (42.72%), Query Frame = 1
Query: 253 GLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIK----VFIEIIDINDNSPKFEYTSFVVEFY---ENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKD-PDANLKLTLI--SDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARL----SVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG----LYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
G N + + +H + + I P + + + RLD E +S I+ + + + V IE++D+NDN+P + + Y EN+ IG +D D G N + TLE F + + ++ G+ +++++ +F + D G+ ++ + I++ DVND P F + R+ E+ +N V V D D G N + + I +T E+R +F++ +G I L+ IP + L + D G+ PLS C +I N+ D N++ P + EN+ + V ++ D D G N + + NT +F+ + T+S + LD E+ SS + D G +S ++ +S+ D+N+ P SY+V E+ + S ++ A D+D P + +I + D F +D G + L K LDRE + + L V D +S ++ +NIT+ D+ND P + +F + E+ S IG + D G N +V + + T N LI GT++ +D E + L + D+G+P L + + V D NDN P QFN SS RL + +F V D DS +SF L+S P LF L+ TG L + G Y L + A D G PP+ S A L +KV N
Sbjct: 202 GTNAEIQYSIETHSDPQAIFGIHPTTGVIVNNVRLDYE--AKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVGQ-SLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIP-QVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYF---NQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNTPFFLDPRKGLVTNS-------RTLDHEVQSSYTFQVAATDGG--GRSCNATVHVSLTDLNDNQPVFD-PSSYSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAI-VNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINST-------GTLYLQSEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSP----------QFNS--SSILVRLPEDTPIGHTFYT-VSVFDADSGVLGRVSFSLLSN-----PGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSST-AMLELKVVDVN 906 HSP 4 Score: 144.436 bits (363), Expect = 9.991e-35 Identity = 177/704 (25.14%), Postives = 297/704 (42.19%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKF-EYTSFVVEFYENSQIG---------YSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQT--VYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILE--------------------------RWEFTSSTFKLIIKKPLDRELMSS-INVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLIS---DNDGFFEI-DVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLY-ENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQF--NFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTN-----GELSEGLYVLKMMASDNGRPPKHS 2394
V I I +I D+ P+F T V ENS++G S + + I I N ++ ++P + + + +DYE N F + A G L + L+I++ D NDN P F N ++ EDT + V +V D+D G NG+V++ I E + F++ S G+I K L+ + F L I D G P S+ C++ V D+N++ P + P ++ I E+T V ++ TD DK + N + ++T IL ++ + T + ++ +D + S I + + D G+P + L + + +I E P ++ + +PE+ + +S V TD A L L IS +N +F I G + + KPLD E + LVV D++ P S+ + + I +SD+ND P + + E + + + + +D DSG NG+V F I K F ++ G I + R +D E + + TD+GSP + + + ++V D NDN P++ P + Q N ++S + + A+D DS NA +SF +I LF ++ +G L TN + Y L + A+D G PP S
Sbjct: 1948 VQIVIGNIQDDPPRFLNQTPARVSIPENSKVGSYITTVRARASSDAQVTYSI-ISGNKGRAFYVDPFTGV----------ISVASADALDYESTKN--FRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGV----FTIDSTTGEITTAKLLDR-ETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPP--LFDPL--SEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRAL--VYVRIIITRE--PKFELPSYFGKVPENAMMGTSVLTVRVTDNA--AGLPLGRISYNIENSNYFRIGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAP-SKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWF------AIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSR----------LYEINATDRDSGANARLSFTVIGGTGQG----LFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSS 2602 HSP 5 Score: 136.732 bits (343), Expect = 2.213e-32 Identity = 162/654 (24.77%), Postives = 286/654 (43.73%), Query Frame = 1
Query: 406 AFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPL---ATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDE----------------------------GENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKF-HLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNN-GKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLI---SDNDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTD-NSPPNSRTTSLALNITISDINDNIP--KLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTS--EIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISF 2241
+++ ++ + I +ID NDNSP F ++ + + E++ + + ATD+D G N +Y++ + ++T + + K+ ++++ F ++ D+G + + + + D+NDN P+F +E V I EDT+ V V+ D D+ G N ++ + T +++ + + + G I R++++ + I D F + + A D G P + L++ I I P + G ++ EN + T+V + VTD G G+++ + N++YF I +R S + KPLD E + + D+ P K + I+V DVN+ P E +PV + V A DKD AN ++ D+ G F ID G ++ + LD E H + V TD SPP T +++ I + D+NDN P ++ P + ENL NS + ++ +D DSG N ++ F +I T + DKF G + + D E T+ + L I TD G+P LS I++ VADE++ +P + + F + +A F+ V A+D DS + + F
Sbjct: 2043 GWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTG-AFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAG--VFTIDSTTGEITTAKL-LDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLSE-VNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQID---YKIDADTGVISARRTID-VRIRDSFIQIPVQAMDQGVPP---QRALVYVRIIITRE-PKFELPSYFG---KVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENSNYFRIGQRSGVIS------VNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPP--MHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGG-TGQGLFLIDKF-----SGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSF-----NRMDYKFDVPGNAK----IGDFVGQVTATDRDSGDQGRVFF 2657 HSP 6 Score: 136.346 bits (342), Expect = 3.215e-32 Identity = 188/752 (25.00%), Postives = 328/752 (43.62%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIK-----VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAG---EDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKL--TLISDN-DGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIH-AYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELS---EGLYVLKMMASDNGRPP 2385
E++P+G ++ + LA+ S+ + ++ + + G +I + + LD E + +L++SA + K V I + D NDN P F+ + YEN I + A D D G NS YT++ L + +D E+ S + +V+A D +D+L + L I I D+NDN P F+ N + +MED N V + D D G+ G V + I + FS+ G + L SL+ D+P ++ L I+A D G+ PL+S V+D+N++ P +G + EN T+V + D D G+N ++ + + V ++++ + ++ LDRE + +++ P + + S+ I+V+D N+ PP + P + +PE+ P + + D D N K+ +++S N DG F I G L LDRE + + L V D +PP T + I I D NDN P + S + E ++I L SD DSG NG + + L + Y + + ++ G ++S + + E + DQG + +K+ D+N++ P +T E + F ++SA+ L +V +D D N ++++L + LF +E TG++ T+ S +G + L ++A D+G PP
Sbjct: 1235 EKLPIGSVVAAV-----LAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEV---TNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGL-IQTTHPIDREEISE--YSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTY-VMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGK-----FSLDLKTGVLKLIGSLDYEDVP-QYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGT---VSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSG---VEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKF-ISPVVTLKVPENSPARLIYTLTVQ-DLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPP-YYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGV--------YSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFP---NTSASALVT----MVTATDADTDKSTNGKVTYRLDDSKNS---TSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPP 1941 HSP 7 Score: 133.65 bits (335), Expect = 1.992e-31 Identity = 195/775 (25.16%), Postives = 321/775 (41.42%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQT----WIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDID-IGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLI-FNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTL---KSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDP--DANLKLTLISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTD-NSPPNSRTTSLALNITISDINDNIPKLLEPTSF--HLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDN-----EPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGEL---SEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSN 2433
V E PV +G + S GSNG + D + ++ + S LDRE K++ + + A + +V + + D+ND SPKF + V E+ +G S +ATD D GPNS +Y + F L + L L +D E ++R+ L V + G L + + I++ DVNDN P+F+ + E + V VL D D+G+NG+V ++I N F + G I ++L+ ++ +++ L ++A D G + +L+ V D N++ P+ P + I EN T V I D D G N ++ + + S ++ S T + P+DRE +S ++ + D + L ++ I + D+N+ P V + + ED P N + A D D N++ ++S + G F +D+ G LKL+ LD E P + L + TD SPP TS L + ++ P F + EN +++ ++ D DSG N ++ Y+I + DKF +++ G I + +DRE L + T P + + V D NDN P+ T EN S ARL I + D D N + + ++S D FT+ TG L T +L ++ Y L + A D PP ++ A + I + N
Sbjct: 1025 VKENEPVATYLG-AVSASDSDEGSNGHVTYRF------DTQVAQFIVDKQTGKITTSQVLDREA---KASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFSLNQV---TGVLTLVSPLDRE-VTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKI----VNGNTDGTFKINETTGVISTLRALD-FEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPII---TWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQS---PRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKF-VSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPP---LTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAEL------TYSIPSGVEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPEN---------SPARL------IYTLTVQDLDYGNNTKVLYSIMSGNTDG----AFTIGRSTGELSTTTKLDRETKASYQLSVQAKDI-TPPYYTAFANITIFIEDQN 1744 HSP 8 Score: 132.88 bits (333), Expect = 3.400e-31 Identity = 181/672 (26.93%), Postives = 285/672 (42.41%), Query Frame = 1
Query: 421 QTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNL-NISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIP---LSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGF----FEIDVFGNLKLMKP-LDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEP-TSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSI-SSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGL---YVLKMMASDNGRPPK 2388
+T + I ++D+NDN P F + E IG LA D D G N Y + + LR +D+E +NRY L RV A D G+ Q + L I + D NDNRP F K I E+ +N V + D D G N R+ + I +++ R +F + S G I ++ +I ++ L + A D L + L + D+N++AP + + N ++E+ V I D D G G V + +T F + + + KLI LD E + + I D G P ++ + ++ V+DVN+ PP + + E+ P +S KV A D+D +N +LT S G F ID L + LDRE + + L V T S P R +S ++ I + D NDN PK + P + + EN + I L V D D G N KV + ++ T F + G + + +DRE + L + D P + I + + D+NDN P+ F S+ SS+ + L+ + I+N+ ASD DS N NI + L N +++++ TG + + + Y +A D G+ PK
Sbjct: 1205 ETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRA-LDFEV-TNRYVL-RVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTI----DSQSPRAHFKINSETGLIQTTHPIDREEI-SEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSR----NLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSL----DLKTGVLKLI--GSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTY-SIPSGVEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYP-FRVSSTSVRINVMDRNDNPPKFISPVVTLKVPEN-SPARLIYTLTVQDLDYGNNTKVLYSIMSGNT------DGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPV----------FQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTL-----SNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPK 1834 HSP 9 Score: 95.1301 bits (235), Expect = 1.243e-19 Identity = 172/725 (23.72%), Postives = 297/725 (40.97%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKS-------NCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL-EPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCEL--SNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKD--PDANLKLTLISDNDGFFEID-----VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLE-PTSFHLYENLNGNSTIGQLKVSDPDS--GLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTI-----FSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRE-----SFIVNVQASDPDSPENANISFKLISAFK 2262
++E VP+ + I K +GLN + + S + +I E+ + + +DRE++ + S + N T +K+ I+ D+NDN+PKF + + E+ + A D D G Y + P F L ++ L L G +DYE + + A D G L S N+ + DVNDN P F + + E+ +V +V D D G N +++ I E FS+ +G I L+ + D + L + A S + NV+D N++ P I P + ++ EN+ L V D D GNN KV + NT + R ST +L LDRE +S +S+ +D P + +I+I + D N+ PP + + I E P +S + A+DKD + N+ TL +D G + ID V+ + + +E F + + + + + + I I D N++ P+ + P H++ N + ++ + + +D D+ NGKV + L + K F V + G++ FS P R L I+ D GSP L + + + + D+ P + ++ + AR+S+ E S+I V+A + +A +++ +IS K
Sbjct: 1339 IYENVPINTNVTTI----KAHDDDSGLNSRIWYTIDSQ-SPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTAT-LKIIIQ--DLNDNAPKF-VSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDL---KTGVLKLIGSLDYEDVPQ--YTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVE----MDKFSIDKHSGLIVTNSILDR-EKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFI-SPVV--TLKVPENSPARLIYTL-TVQDLDYGNNTKVLYSIMSGNTDGAFTIGR-----STGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFF-----CIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDS-----KNSTSLFVVESNTGSVRTSAGFSNPPQGRHA-----LYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRF-------------LNQTPARVSIPENSKVGSYITTVRAR---ASSDAQVTYSIISGNK 2004 HSP 10 Score: 94.7449 bits (234), Expect = 1.787e-19 Identity = 138/571 (24.17%), Postives = 237/571 (41.51%), Query Frame = 1
Query: 304 GVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQ-TWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLE----PLLDLFELMYTP---------PRSLKLVLRGKVDYEKKSNRYFLTRVKACDA------------GEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEG-ENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGM---TTVALIMVTDGDKGNNGKVNCELSNTSYFVIL---ERWEFT--SSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNV-IPEDLPVNSSFAKVIATDKDPDANLKLTLI---SDNDGFFEIDVF-GNLKLMKPLDRELRPFH--PLVVLVTD-NSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLL 1887
GV I + ++ + LDRE I + I + T +V + + D+NDN P F+ S V E+++ G +ATD D S +Y L+ P + + + T S + ++DY+ ++ ++ + D DQ + + + P F + ++ E+ + +V V V D G GR+S+ I ++ YF + +G I + K L+ + +F L ++A D A + NV D+N+ KP G + + + G+ T V + D D G NG+V +F I ++ F T + ++ LD E + + +VS+ D G P T S++I V+D+N+ PP +V +V + E+LP+NS ++ ATD+D AN +L+ G F ID F G L D E + L + TD +PP S ++ +N+ D D ++ F + N +GQ+ +D DSG G+V F+
Sbjct: 2115 GVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLS-EVNIREDTRTGAVVTSVVATDTD--KESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITREPKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENS-------NYFRIGQRSGVISVNKPLD-YETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDE------KPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRV--------WFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMD-YKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVF 2659 HSP 11 Score: 93.5893 bits (231), Expect = 3.728e-19 Identity = 117/474 (24.68%), Postives = 198/474 (41.77%), Query Frame = 1
Query: 1063 AIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKK-----------------PLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLI----SDNDGFFEID-----VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKL----LEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEG---LYVLKMMASDNGRPP 2385
+ P S L++ V D+N+++PS + + K + EN LI V D D G+N S SY ++ + FKLI K+ +DRE + S ++I D G P +SI+V D N+ P IPE++ V +S +V A+DKD N ++ SD F I + N++ LD E + + +VV D + ++S + I + D+NDN P + S+ + EN + + ++ VSD DSG NG+V L D KF V D+ I + +DRE L+ + D+G P + E+ + V D ND P + + + + + +A + + V A D D N+ + + + + + ++ F ++ +G + T +L VL ++ D G PP
Sbjct: 36 STPPKSYTVLVY-VQDLNDNSPSFVRGTSA--KLVVFENDKDFRQ-KLIAV-DSDFGSN-------STQSYTIVSGN---VGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVIVNNVR----LDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGG----DGYFSMKFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKF-----DRHTYETRVWENAT----VNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPP 477 HSP 12 Score: 56.225 bits (134), Expect = 8.001e-8 Identity = 70/271 (25.83%), Postives = 108/271 (39.85%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQM-SAFINAQTWIKVFIEIIDINDNSPKFEYTS-FVVEFYENSQIGYSQELPL--------ATDIDIGPNSVHSYTLEP-------LLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRL 945
E +PVG I+ ++ K +G N F + S D KG I ++ + LD E + + T + V I ++D+NDN P F V+ EN LPL ATD D G N+ S+T+ L+D F S L DYE + + +KA DAG L S + + +++ D ++ P F + + + + ++ V QV D D G+ GRV F + N L
Sbjct: 2418 EGIPVGTIVVNVSAADK----DSGANGRVWFAIQSGDD-KGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLEN--------LPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKF--------SGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNPTSNAL 2667
BLAST of Protocadherin 11 vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 245.743 bits (626), Expect = 5.538e-67 Identity = 232/788 (29.44%), Postives = 353/788 (44.80%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSS-RLDREQLCD------KSNCILQMSAFIN------AQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLD---LFELMYTPPRSLKL---VLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHT--PENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSST---FKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL--TLISDN--DGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVY 2424
V EE P +IG + D L S L K ++ +++ ++ D+F + +DRE L D C L+ + + I+ IE+ DINDN+P+F + + EN+ +G +PLATD D N V Y L D LF L R KL ++ G +D E K + Y LT +KA D G Q S+ L + + D NDN P F + + E++ + +V QV D D G NG + + ++ P +L R + G IY++ L+ +I + + ARD G P SS+ + V D N++AP++ ++ +G I E+ T VAL+ V+D D+G N V C ++ F + + TS + L PLD E + V IV D+G P S+ S+ + V DVN+ P E+ + V ATD D N +L ++ D+ G FEID G +K PLDRE + + V D P + T+ + I + D NDN PK +L SF + EN+ S +G + V D D G N V + + KF V GTI S DRE S R+ D G P S + + V DENDN+P+ T PS+ + + ++S + + V V+A D DS NA++ F + P LF + +G + E++ GL+ L + SD G+PP+H AT + +Y
Sbjct: 28 VQEEQPPNTLIGSLAADHGLP-DSGHLYKLEV--------GAPYLRVDGKTGDIFTTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPLATDRDSERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELK-DSYDLT-IKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLR----IDRTTGIIYVKGPLDREEI-NSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIR-GIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVV-IKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSV--------EPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDV-------VEAEDLDSGPNADLVFSIAGGN----PYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRH---ATALVHIY 775
BLAST of Protocadherin 11 vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 247.669 bits (631), Expect = 7.273e-67 Identity = 232/788 (29.44%), Postives = 353/788 (44.80%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSS-RLDREQLCD------KSNCILQMSAFIN------AQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLD---LFELMYTPPRSLKL---VLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHT--PENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSST---FKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKL--TLISDN--DGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPK-LLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVY 2424
V EE P +IG + D L S L K ++ +++ ++ D+F + +DRE L D C L+ + + I+ IE+ DINDN+P+F + + EN+ +G +PLATD D N V Y L D LF L R KL ++ G +D E K + Y LT +KA D G Q S+ L + + D NDN P F + + E++ + +V QV D D G NG + + ++ P +L R + G IY++ L+ +I + + ARD G P SS+ + V D N++AP++ ++ +G I E+ T VAL+ V+D D+G N V C ++ F + + TS + L PLD E + V IV D+G P S+ S+ + V DVN+ P E+ + V ATD D N +L ++ D+ G FEID G +K PLDRE + + V D P + T+ + I + D NDN PK +L SF + EN+ S +G + V D D G N V + + KF V GTI S DRE S R+ D G P S + + V DENDN+P+ T PS+ + + ++S + + V V+A D DS NA++ F + P LF + +G + E++ GL+ L + SD G+PP+H AT + +Y
Sbjct: 105 VQEEQPPNTLIGSLAADHGLP-DSGHLYKLEV--------GAPYLRVDGKTGDIFTTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPLATDRDSERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELK-DSYDLT-IKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLR----IDRTTGIIYVKGPLDREEI-NSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIR-GIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVV-IKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSV--------EPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDV-------VEAEDLDSGPNADLVFSIAGGN----PYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRH---ATALVHIY 852
BLAST of Protocadherin 11 vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 235.343 bits (599), Expect = 6.006e-63 Identity = 234/875 (26.74%), Postives = 378/875 (43.20%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQL--C----DKSNCIL--QMSAFINAQTWIKVF---IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL---------------------------EPLLDLFELMYT----PPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK----LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSS----FAKVIATDKDPDANLKLT--LISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVYS----SNSGFFFGGETDRLSLTLIVALAS-----------------VTCIICVSLLVAIIIVRRH 2556
EE P +G++ D + GS + F + S + + I E R+DRE+L C D++ C + ++S AQ+W+ +F + I+DINDN+P F + EN IG LP ATD D G N + Y L +FEL + +L+++G +D E++ + RV+ D G+ S+ L + I DVNDN P F K + E++ + Q+ D D G NG++ + E+ RR + G + + ++ ++ + + ARD G P + ++ N+ D N++ P+I ++ +G + E+ + T +AL+ V+D D+G NG V C + F + E K L PLD E NV IV D+G P ++ S+ + V D N+ PP S NV+ P N++ V ATD D N +++ L S +G F ID G++++ LDRE + + V+ D N+ S + + + D NDN PK ++ +F++ ENL+ NS +G + V D D G N ++ + I + GTIFS DRE + R+ D G P S + L V DENDN P TFP N+ + SS R VR V A+D D+ NA++++ +I P LF ++ TG + +L + GL+ L + +DNG+P S+ T + VY SNS LS +L +A V+ I+ V L++ ++++ R+
Sbjct: 36 EEGPADVRVGNVAADLGMVAGSREVT----FTLESGSEFFKIDNITGELTT--NEKRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVR--DGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADADVGVNGQIEYVFGAATES--VRRLLRLDESTGWLSVLHRIDREEV-SQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIR-KIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIF----SKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGI-NTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENET--------GTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPI--NSSYTLLPPSSTVRTVVR-----TVIATDTDTGINADLNYSIIGGN----PFRLFEIDGATGVISLMAKLEQKHYGLHRLVVQVTDNGQP---SQSTTTLVHVYVNETLSNSTIVETQVARSLSTSLNTNIAGDPNYDLSKQRLSIVIGVVSGIMTVILIILVVVMARY 871
BLAST of Protocadherin 11 vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 234.572 bits (597), Expect = 6.316e-63 Identity = 222/810 (27.41%), Postives = 355/810 (43.83%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQL--C----DKSNCIL--QMSAFINAQTWIKVF---IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL---------------------------EPLLDLFELMYT----PPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK----LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSS----FAKVIATDKDPDANLKLT--LISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVY 2424
EE P +G++ D + GS + F + S + + I E R+DRE+L C D++ C + ++S AQ+W+ +F + I+DINDN+P F + EN IG LP ATD D G N + Y L +FEL + +L+++G +D E++ + RV+ D G+ S+ L + I DVNDN P F K + E++ + Q+ D D G NG++ + E+ RR + G + + ++ ++ + + ARD G P + ++ N+ D N++ P+I ++ +G + E+ + T +AL+ V+D D+G NG V C + F + E K L PLD E NV IV D+G P ++ S+ + V D N+ PP S NV+ P N++ V ATD D N +++ L S +G F ID G++++ LDRE + + V+ D N+ S + + + D NDN PK ++ +F++ ENL+ NS +G + V D D G N ++ + I + GTIFS DRE + R+ D G P S + L V DENDN P TFP N+ + SS R VR V A+D D+ NA++++ +I P LF ++ TG + +L + GL+ L + +DNG+P S+ T + VY
Sbjct: 36 EEGPADVRVGNVAADLGMVAGSREVT----FTLESGSEFFKIDNITGELTT--NEKRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVR--DGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADADVGVNGQIEYVFGAATES--VRRLLRLDESTGWLSVLHRIDREEV-SQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIR-KIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIF----SKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGI-NTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENET--------GTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPI--NSSYTLLPPSSTVRTVVR-----TVIATDTDTGINADLNYSIIGGN----PFRLFEIDGATGVISLMAKLEQKHYGLHRLVVQVTDNGQP---SQSTTTLVHVY 806 HSP 2 Score: 70.0922 bits (170), Expect = 1.140e-11 Identity = 84/336 (25.00%), Postives = 148/336 (44.05%), Query Frame = 1
Query: 436 VFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDK--FHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISV 1437
+ +++ D NDN P F V F EN+ G ATD D G N+ SY+L+ ++ + S + + +D E+K F +V A D G + L + + ++D NDN P F++ + + E+ N V V V D D+G+N + I FS+++ G I+ S S D K + + A D G P S+ + V+D N++AP++ P + + ++ T V ++ TD D G N +N + + F + +E +T + + L+++ + + DNG P +ST + + V
Sbjct: 489 LLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVN--GIFSIDSDSGDIRVNTNLDREQKERYEF--KVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEE------EEEIFSIENETGTIF---STLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTF-PINSSYTLLPPSSTVRTVVRTVIATDTDTGINADLNYSIIGGNPFRL---FEIDGATGVISLMAKLEQKHYGLHRLVVQVTDNGQPSQSTTTLVHVYV 807
BLAST of Protocadherin 11 vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 235.343 bits (599), Expect = 7.542e-63 Identity = 234/875 (26.74%), Postives = 378/875 (43.20%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQL--C----DKSNCIL--QMSAFINAQTWIKVF---IEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTL---------------------------EPLLDLFELMYT----PPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG------NKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFK----LIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSS----FAKVIATDKDPDANLKLT--LISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPT-SFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSE---GLYVLKMMASDNGRPPKHSKDATLYIKVYS----SNSGFFFGGETDRLSLTLIVALAS-----------------VTCIICVSLLVAIIIVRRH 2556
EE P +G++ D + GS + F + S + + I E R+DRE+L C D++ C + ++S AQ+W+ +F + I+DINDN+P F + EN IG LP ATD D G N + Y L +FEL + +L+++G +D E++ + RV+ D G+ S+ L + I DVNDN P F K + E++ + Q+ D D G NG++ + E+ RR + G + + ++ ++ + + ARD G P + ++ N+ D N++ P+I ++ +G + E+ + T +AL+ V+D D+G NG V C + F + E K L PLD E NV IV D+G P ++ S+ + V D N+ PP S NV+ P N++ V ATD D N +++ L S +G F ID G++++ LDRE + + V+ D N+ S + + + D NDN PK ++ +F++ ENL+ NS +G + V D D G N ++ + I + GTIFS DRE + R+ D G P S + L V DENDN P TFP N+ + SS R VR V A+D D+ NA++++ +I P LF ++ TG + +L + GL+ L + +DNG+P S+ T + VY SNS LS +L +A V+ I+ V L++ ++++ R+
Sbjct: 36 EEGPADVRVGNVAADLGMVAGSREVT----FTLESGSEFFKIDNITGELTT--NEKRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVR--DGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAADADVGVNGQIEYVFGAATES--VRRLLRLDESTGWLSVLHRIDREEV-SQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIR-KIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIF----SKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGI-NTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENET--------GTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPI--NSSYTLLPPSSTVRTVVR-----TVIATDTDTGINADLNYSIIGGN----PFRLFEIDGATGVISLMAKLEQKHYGLHRLVVQVTDNGQP---SQSTTTLVHVYVNETLSNSTIVETQVARSLSTSLNTNIAGDPNYDLSKQRLSIVIGVVSGIMTVILIILVVVMARY 871
BLAST of Protocadherin 11 vs. Planmine SMEST
Match: SMESG000025393.1 (SMESG000025393.1) HSP 1 Score: 2097.78 bits (5434), Expect = 0.000e+0 Identity = 1042/1069 (97.47%), Postives = 1047/1069 (97.94%), Query Frame = 1
Query: 73 MSLIMFEMFFCILTLMKLFIXXXXXXXXXXXXXXXVFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRRHRYSSIQYSVNVHTNDHNSLVNDSLTKWTEEQNQYIDTWNYPPHYCSYPVIPGVQKLSSIGEPLLPPPGPKDVLNSMNNSTHMCSVMHLRRPTNQDIDVSSADSGRGASEEENILNEAKNRESVRNRGKMYPTMPPISSVCACQDSLSLCGSCANNVGSQFHYQYVTYTPTSYPNYDDIDSSIQFHTSRPQNEQSNRNYHTIDTMVTATSMGSYTDVIPMDSNIQQNFPKDMSSFLGPHSNV 3279
MSLIMFEMFFCILTLMKLFISSYGSQSSSLSLNYSVFEEVPVGKIIGHIIKDSKLAIGSNG+NKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP LDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVR+MEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVID+NEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT+ISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKD FFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLS RESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLY+LKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRRHR LVNDSLTKWTEEQNQYIDTWNYPPHYCSYPVIPGVQKLSSIGEPLLPPPGPKDVLNSMNNSTHMCSVMHLRRPTNQDIDVSSADSGRGASEEENI NEAKNRESVRNRGKMYPTMPPISSVCACQDSLSLCGSCANNVGSQFHYQYVTYTPTSYPNYDDIDSSIQFHTSRPQNEQSNRNYHTIDTMVTATSMGSYTDVIPMDSNIQQN PKDMSSFLGPHSNV
Sbjct: 1 MSLIMFEMFFCILTLMKLFISSYGSQSSSLSLNYSVFEEVPVGKIIGHIIKDSKLAIGSNGVNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPPLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRVMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDINEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTIISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDTFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSARESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYILKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRRHR-----------------LVNDSLTKWTEEQNQYIDTWNYPPHYCSYPVIPGVQKLSSIGEPLLPPPGPKDVLNSMNNSTHMCSVMHLRRPTNQDIDVSSADSGRGASEEENIFNEAKNRESVRNRGKMYPTMPPISSVCACQDSLSLCGSCANNVGSQFHYQYVTYTPTSYPNYDDIDSSIQFHTSRPQNEQSNRNYHTIDTMVTATSMGSYTDVIPMDSNIQQNLPKDMSSFLGPHSNV 1052
BLAST of Protocadherin 11 vs. Planmine SMEST
Match: SMESG000025393.1 (SMESG000025393.1) HSP 1 Score: 2087.38 bits (5407), Expect = 0.000e+0 Identity = 1038/1065 (97.46%), Postives = 1043/1065 (97.93%), Query Frame = 1
Query: 85 MFEMFFCILTLMKLFIXXXXXXXXXXXXXXXVFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRRHRYSSIQYSVNVHTNDHNSLVNDSLTKWTEEQNQYIDTWNYPPHYCSYPVIPGVQKLSSIGEPLLPPPGPKDVLNSMNNSTHMCSVMHLRRPTNQDIDVSSADSGRGASEEENILNEAKNRESVRNRGKMYPTMPPISSVCACQDSLSLCGSCANNVGSQFHYQYVTYTPTSYPNYDDIDSSIQFHTSRPQNEQSNRNYHTIDTMVTATSMGSYTDVIPMDSNIQQNFPKDMSSFLGPHSNV 3279
MFEMFFCILTLMKLFISSYGSQSSSLSLNYSVFEEVPVGKIIGHIIKDSKLAIGSNG+NKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEP LDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVR+MEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVID+NEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLT+ISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKD FFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLS RESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLY+LKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRRHR LVNDSLTKWTEEQNQYIDTWNYPPHYCSYPVIPGVQKLSSIGEPLLPPPGPKDVLNSMNNSTHMCSVMHLRRPTNQDIDVSSADSGRGASEEENI NEAKNRESVRNRGKMYPTMPPISSVCACQDSLSLCGSCANNVGSQFHYQYVTYTPTSYPNYDDIDSSIQFHTSRPQNEQSNRNYHTIDTMVTATSMGSYTDVIPMDSNIQQN PKDMSSFLGPHSNV
Sbjct: 1 MFEMFFCILTLMKLFISSYGSQSSSLSLNYSVFEEVPVGKIIGHIIKDSKLAIGSNGVNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCDKSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPPLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRVMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNKCQIIENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSSTFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDINEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTIISDNDGFFEIDVFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYENLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDTFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSARESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYILKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRRHR-----------------LVNDSLTKWTEEQNQYIDTWNYPPHYCSYPVIPGVQKLSSIGEPLLPPPGPKDVLNSMNNSTHMCSVMHLRRPTNQDIDVSSADSGRGASEEENIFNEAKNRESVRNRGKMYPTMPPISSVCACQDSLSLCGSCANNVGSQFHYQYVTYTPTSYPNYDDIDSSIQFHTSRPQNEQSNRNYHTIDTMVTATSMGSYTDVIPMDSNIQQNLPKDMSSFLGPHSNV 1048
BLAST of Protocadherin 11 vs. Planmine SMEST
Match: SMESG000023091.1 (SMESG000023091.1) HSP 1 Score: 417.157 bits (1071), Expect = 1.263e-127 Identity = 307/954 (32.18%), Postives = 476/954 (49.90%), Query Frame = 1
Query: 178 VFEEVPVGKIIGHIIKDSKLAIGSNGLNKCQLFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLCD-----------KSNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEINHTPENR---LARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARDHGAIPLSSECKLIFNVIDINNHAPSIIVKPTLG-NKCQII--ENTIGMTTVALIMVTDGDKGNNGKVNCELSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISD--NDGFFEID-VFGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSR-TTSLALNITISDINDNIPKLLEPTS-FHLYE-NLNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTINDKLIKDKFF-VNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPVYLFTLELMTGNLGTNGELSEGLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRRHRY---------SSIQYSVNVHTNDHN--SLVNDSL-------------TKWTEEQNQYIDTWNYPPHYCSYPVIPGVQKLSSIGEPLLPPPGPKDVLNSMNNSTHMCSVMHLRRPTNQDIDVSSADSGRGASEEE 2889
V EE P +IG+I KDS+L S ++ F + ++ K +I ++ + +V+ R+DRE +C NC L ++ F+ + WI V I I DIND+ P FE V+E E I + L LA D+DIGPN++ Y LE D+F L Y PP L L L+ K+DY+ + + ++ACD G+ C L+I +ND NDN PIF+K V + E T + +++V+ D D G G +++ + + N + +F + +G I L + L++ P F + + A D G PL + + + DIN+H P I +KP C + EN + LI+VTDGD G NGKV+C ++ ++L+ + +I DRE S +SI C+D G P ST ++I I + DVNE+PP + I ED+ + F V DKD N+ LI + N +F ID FG +K+ LDRE + + ++V DN ++ TTS +L +++ D NDN P LL + ++ E N I Q+ D D G N V++ I+ +++IK+K F +N +G +F++ +DRE + +LLTD+G+P + EE I++ + D+NDN PIW FPS +N+ N + +++ I + A D D+ ENAN+++ L + + + +F L G + L+ ++VL + ASDNG P S TL I+ + +G G D +S LIV +A VTC+IC+SLL+AI++VRR + S+I +++N N +L ND KW NQY +Y + + SS+GEPLL + V + NS + R N +ID SS DSG G SEE+
Sbjct: 31 VKEESPPNYLIGNIKKDSRL---SEKNSESLTFQIYEDEEKKNYFRIVEKTGEFYVAGRIDRETICSFKEVGDSDPLKAQNCKLSLTVFVPKEHWINVEITIEDINDHVPVFEPNWKVIEIDERVSINFETPLALAKDLDIGPNNIQEYKLEQPSDIFGLNYEPPFILNLYLKSKLDYDVPDGKNYSLILRACDGGDPIQCGHQKLSIRVNDYNDNPPIFMKSEYMVNVSEKTAVGSEIFRVIATDRDSGLYGSINYFMYESVSNHKKSVEVPFFKISKNSGRIILNRKLDAKLTP-SFFMRLEAHDSGESPLMGQAVMKIIIEDINDHTPQISIKPKPDIPDCMLSLPENNDKNAYIGLIIVTDGDIGQNGKVSCVINKDEEKILLKVSNNGDDRMIYSIIANHTFDREAESLFTISITCKDYGQPPLSTSQTIEICISDVNEHPPVINNNIKEVNISEDVSIGQEFFTVEVEDKDATRNISF-LIQETINKIYFSIDRKFGKIKIKSNLDREKIDRYIICIVVEDNKQLGTQFTTSFSLTVSVMDANDNKPYLLNSSKVINIIEGNYGVKEKIFQVFALDNDIGSNAVVEY-TINYIKYRNEIIKEKVFTINRKNGELFALTSLDREKYDVYKISLLLTDKGNPPQTKEEIILVNIIDKNDNAPIWKFPSPQNDIINLT------KITYPGQIIATIHAYDNDTLENANVTYTL-TKVEPPLNSNIFKLHETQGTIQVTEFLTLKMFVLHLQASDNGNTPLKSVPTTLTIRYWPMETGSLLSGH-DSVSFNLIVTMAVVTCLICLSLLIAIVVVRRRQNYTCSHSQSPSNIMFAINTDQNRSQFITLRNDPYYLDPLAGDASVLSNKWF---NQYDSKNDYSLSLQRNKMFLSDFQASSLGEPLL-----QSVPSMHLNSPRDTLIRKSFRTANGEIDGSSGDSGHGISEED 962
BLAST of Protocadherin 11 vs. Planmine SMEST
Match: SMESG000008751.1 (SMESG000008751.1) HSP 1 Score: 358.992 bits (920), Expect = 9.686e-107 Identity = 297/945 (31.43%), Postives = 481/945 (50.90%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQ---LFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLC---DK-SNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARD-HGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNK--CQIIENTIGMTTVALIMVTDGDKGNNGKVNCE-LSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYEN---LNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTIND-----KLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPV-YLFTLELMTGNLGTNGELSE-GLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRRHRYSSIQYSVNVHTNDHNSLVNDSLTKWTEEQNQYIDTWNYPPHYCSYPVIPGVQKLSS------IGEPLLPP--PGPKDVLNS-MNNSTHMCSVMHLR-RPTNQDIDVSSADSGRGASEEENILNEAK 2910
EE + +IG+I +DS+ S + K + + + + D + ++ + L V+ R+DRE LC DK +C L++ WIKVFI I DINDN PKF ++ E+ +G L A D D+ V SY LE F L+Y P SL LV+ K+D+E S+RYF + ACD G C K L I + D NDN PIF + I E T + ++ D D G G+++F++ T +N++ YF++ G++ L SLN+ I KF L + ARD +G P SS+C+L V D NNHAP + +LG++ I+EN+ V +++ +DGD +NGKV C L N S ++ L+R ++L+ + DREL+ + I C+D G P + + ++SV D+NE+PP+ I ED+ +NS+ ++ A DKD +L L + F+ID+ G LK + DRE+ P + + V VTD T + + IT++D+NDN P + F + EN L + IG+L+ D D+ N V L+ + +++ +L+ F +++ +F +DRE + L I+++D G P S+ E I + V DENDN PIW + +NNQ + ++ +A + I+ VQA+D D+ +N+NIS+ ++ +++ FT+ G + + +L E G Y LK+ A+DNG PP+ S + +K+ ++ + + ++S TLIV + + ICV+L+V II++ R Y IQ + + T + + + +W E + ++D + P ++S + +PLL P++ + S + N + S HL+ R + D D SS DSG GASE I +EAK
Sbjct: 17 EESDINTLIGNIFEDSR----SEYMRKPKENFTYKIYTTDIDSNLTKLDFKG-HLLVNKRIDREFLCPNVDKIDDCQLELMIHAFPDHWIKVFIIIEDINDNKPKFPTKEKRIKVSESIAVGNQLPLQTAMDEDLEYFGVQSYNLEDSEPFFSLLYRPMFSLTLVVLKKLDFENISHRYFNLTLIACDGGTPVQCDKQKLQIEVTDSNDNNPIFDQTQNYKFIKESTPIGSVIFIFNASDADSGLFGKINFKLLPARTTKNKV---YFNLNFNTGELVLITSLNA-KIVSKFILDVEARDENGVGPFSSQCQLTIRVQDENNHAPIL----SLGDRESLTIMENSPAGEHVGMVIASDGDLEDNGKVTCVLLKNDSNYLALDRSHNMKDEIIYRLVTTRVFDRELLDYFTIMISCQDYGNPPHRSFQLFNVSVGDINEFPPSFYHSNYSIFISEDIEINSALIQIKALDKDKTHSLNYHLDPSVNDKFQIDINKGILKNIVHFDREVIPKYIVPVFVTDQVRGTILTGTTTVYITVTDVNDNTPVMTGIKQFVIRENVQILTYGNLIGELQTQDLDNSYNATVVCDLLSVHVLSNHMSWIRLLNHSFEIDKYKCNLFVKSSLDREQIDKYKLNIIISDLGIPKRSNMEIITVMVEDENDNSPIWRY---QNNQTAYQVNVTAE--TNLNHPIILVQATDIDAKKNSNISYNFVNNDVNSLWYEKYFTILTRNGGIFMSRDLQESGTYYLKIQATDNGSPPRFSDVTIITVKISTAEKTNYLIKNS-QISFTLIVVTSLASFSICVALMVGIILMWRKSY-PIQLNSDRTTGNWD---DPKTLQW--EISPFVDVDHRPNESIVLNDSKFYNSMTSDLCNICVADPLLTQFRDFPQNRIESNIPNQNILQSSGHLQFRQFSPDFDSSSVDSGHGASEYNPINSEAK 936
BLAST of Protocadherin 11 vs. Planmine SMEST
Match: SMESG000008751.1 (SMESG000008751.1) HSP 1 Score: 358.607 bits (919), Expect = 1.462e-106 Identity = 297/945 (31.43%), Postives = 481/945 (50.90%), Query Frame = 1
Query: 184 EEVPVGKIIGHIIKDSKLAIGSNGLNKCQ---LFDMTSHDQSKGVIQIKPESCDLFVSSRLDREQLC---DK-SNCILQMSAFINAQTWIKVFIEIIDINDNSPKFEYTSFVVEFYENSQIGYSQELPLATDIDIGPNSVHSYTLEPLLDLFELMYTPPRSLKLVLRGKVDYEKKSNRYFLTRVKACDAGEDQLCSKLNLNISINDVNDNRPIFLKCNESVRIMEDTQLNQTVYQVLVKDLDEGENGRVSFEI--NHTPENRLARRYFSVKSINGDIYLRKSLNSIDIPDKFHLAITARD-HGAIPLSSECKLIFNVIDINNHAPSIIVKPTLGNK--CQIIENTIGMTTVALIMVTDGDKGNNGKVNCE-LSNTSYFVILERWEFTSS--TFKLIIKKPLDRELMSSINVSIVCRDNGIPVKSTLKSISISVIDVNEYPPALKVEPSYNVIPEDLPVNSSFAKVIATDKDPDANLKLTLISDNDGFFEIDV-FGNLKLMKPLDRELRPFHPLVVLVTDNSPPNSRTTSLALNITISDINDNIPKLLEPTSFHLYEN---LNGNSTIGQLKVSDPDSGLNGKVKFLLIHAYTIND-----KLIKDKFFVNEDDGTIFSIRPIDREVTSEIILRILLTDQGSPSLSHEEKIVLKVADENDNEPIWTFPSDENNQFNFSISSSAARLSVRESFIVNVQASDPDSPENANISFKLISAFKDNIPV-YLFTLELMTGNLGTNGELSE-GLYVLKMMASDNGRPPKHSKDATLYIKVYSSNSGFFFGGETDRLSLTLIVALASVTCIICVSLLVAIIIVRRHRYSSIQYSVNVHTNDHNSLVNDSLTKWTEEQNQYIDTWNYPPHYCSYPVIPGVQKLSS------IGEPLLPP--PGPKDVLNS-MNNSTHMCSVMHLR-RPTNQDIDVSSADSGRGASEEENILNEAK 2910
EE + +IG+I +DS+ S + K + + + + D + ++ + L V+ R+DRE LC DK +C L++ WIKVFI I DINDN PKF ++ E+ +G L A D D+ V SY LE F L+Y P SL LV+ K+D+E S+RYF + ACD G C K L I + D NDN PIF + I E T + ++ D D G G+++F++ T +N++ YF++ G++ L SLN+ I KF L + ARD +G P SS+C+L V D NNHAP + +LG++ I+EN+ V +++ +DGD +NGKV C L N S ++ L+R ++L+ + DREL+ + I C+D G P + + ++SV D+NE+PP+ I ED+ +NS+ ++ A DKD +L L + F+ID+ G LK + DRE+ P + + V VTD T + + IT++D+NDN P + F + EN L + IG+L+ D D+ N V L+ + +++ +L+ F +++ +F +DRE + L I+++D G P S+ E I + V DENDN PIW + +NNQ + ++ +A + I+ VQA+D D+ +N+NIS+ ++ +++ FT+ G + + +L E G Y LK+ A+DNG PP+ S + +K+ ++ + + ++S TLIV + + ICV+L+V II++ R Y IQ + + T + + + +W E + ++D + P ++S + +PLL P++ + S + N + S HL+ R + D D SS DSG GASE I +EAK
Sbjct: 28 EESDINTLIGNIFEDSR----SEYMRKPKENFTYKIYTTDIDSNLTKLDFKG-HLLVNKRIDREFLCPNVDKIDDCQLELMIHAFPDHWIKVFIIIEDINDNKPKFPTKEKRIKVSESIAVGNQLPLQTAMDEDLEYFGVQSYNLEDSEPFFSLLYRPMFSLTLVVLKKLDFENISHRYFNLTLIACDGGTPVQCDKQKLQIEVTDSNDNNPIFDQTQNYKFIKESTPIGSVIFIFNASDADSGLFGKINFKLLPARTTKNKV---YFNLNFNTGELVLITSLNA-KIVSKFILDVEARDENGVGPFSSQCQLTIRVQDENNHAPIL----SLGDRESLTIMENSPAGEHVGMVIASDGDLEDNGKVTCVLLKNDSNYLALDRSHNMKDEIIYRLVTTRVFDRELLDYFTIMISCQDYGNPPHRSFQLFNVSVGDINEFPPSFYHSNYSIFISEDIEINSALIQIKALDKDKTHSLNYHLDPSVNDKFQIDINKGILKNIVHFDREVIPKYIVPVFVTDQVRGTILTGTTTVYITVTDVNDNTPVMTGIKQFVIRENVQILTYGNLIGELQTQDLDNSYNATVVCDLLSVHVLSNHMSWIRLLNHSFEIDKYKCNLFVKSSLDREQIDKYKLNIIISDLGIPKRSNMEIITVMVEDENDNSPIWRY---QNNQTAYQVNVTAE--TNLNHPIILVQATDIDAKKNSNISYNFVNNDVNSLWYEKYFTILTRNGGIFMSRDLQESGTYYLKIQATDNGSPPRFSDVTIITVKISTAEKTNYLIKNS-QISFTLIVVTSLASFSICVALMVGIILMWRKSY-PIQLNSDRTTGNWD---DPKTLQW--EISPFVDVDHRPNESIVLNDSKFYNSMTSDLCNICVADPLLTQFRDFPQNRIESNIPNQNILQSSGHLQFRQFSPDFDSSSVDSGHGASEYNPINSEAK 947 The following BLAST results are available for this feature:
BLAST of Protocadherin 11 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protocadherin 11 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Protocadherin 11 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protocadherin 11 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Protocadherin 11 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Protocadherin 11 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Protocadherin 11 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protocadherin 11 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protocadherin 11 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Protocadherin 11 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Protocadherin 11 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protocadherin 11 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Protocadherin 11 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Protocadherin 11 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30002762 ID=SMED30002762|Name=Protocadherin 11|organism=Schmidtea mediterranea sexual|type=transcript|length=3400bpback to top protein sequence of SMED30002762-orf-1 >SMED30002762-orf-1 ID=SMED30002762-orf-1|Name=SMED30002762-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1071bp MMSLIMFEMFFCILTLMKLFISSYGSQSSSLSLNYSVFEEVPVGKIIGHIback to top Aliases
The feature 'Protocadherin 11' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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