SMED30002653
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppSub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30002653 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Alignments
SMED30002653 aligns in the following genomic locations:
Homology
BLAST of SMED30002653 vs. TrEMBL
Match: A0A4S2LZM5 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_003893 PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.235e-19 Identity = 70/317 (22.08%), Postives = 148/317 (46.69%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQF-LSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIV 948 +E +P+ P V+ + ++M + P +R G+ +E+E ++ +TP+V + + + QT+ + P + F + E P + V P+V ++ TQ+ D+ P V GF +++E ++ VTP + + + S++ ++ + + GY + E + +VP+V+ +++ T+++TE+ R G S + +P ++TPM + YK+R+ + +P + ++SE +++ + ++P V + T TDLT K PGF S + ++P+V Sbjct: 2034 EEHEHPITAVPYVRH--YKTRMERSLVAKPRLRPGYRSEMEHKQTFSVTPMVPEYRTTIEQTLPSV---PRLKPGFATEVERPISMDVVPVVP--EYKTQLSTDVPARPQVQRGFSSEREYIRSMSVTPMVPE--YESKLEHKVVERPVLEAGYASEGEHEHPMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPM--------------------------------TTEYKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVVQPGFVSEQQHMLTMEVVPVV 2309 HSP 2 Score: 93.9745 bits (232), Expect = 1.643e-16 Identity = 64/326 (19.63%), Postives = 151/326 (46.32%), Query Frame = 1 Query: 4 EVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK-GKNLTRHFS 978 EV P+ + + ++ +Q+ TD+ P V+ GF +E E + + +TP+V ++ S+ ++ P + + + S E + ++V P+V+ ++ T++ ++ + P GF ++ + +P +VTP + + +++ + + + GY++ +E T +E+VPVV + + T+++T++ V+ G S ++ M ++ P++ +K+ ++ E P+ + + + +E L +KQ Q + T L + S T + + + +N++P+V + T HF+ Sbjct: 2107 EVERPISMDVVPVVPEYKTQLSTDVPARPQVQRGFSSEREYIRSMSVTPMV--PEYESKLEHKVVERPVLEAGYASEGEHEHPMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPMTTE--YKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVVQPGFVSEQQHMLTMEVVPVV--------------------------------PEFKTELSTEVHARPQLTAGHETRLDYERQLQWETELKQYQ--SAVSTRLPSRPSLTSVYSATLEHETSMNVVPVVPYDERFTSHFT 2394 HSP 3 Score: 85.8853 bits (211), Expect = 8.326e-14 Identity = 48/195 (24.62%), Postives = 107/195 (54.87%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESR 585 +E + + +TPMV + + S++ + P + G+ +E E + + + P+VR++++ ++ TE+ P F S +P + VTP+ ++ T+ME + ++PI+ +G+ +++E +V P + + +++T +++ V G+ + ++ ++E+VPVV E F T++STE+ + G E+R Sbjct: 2145 REYIRSMSVTPMVPEYE--SKLEHKVVERPVLEAGYASEGEHEHPMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPMTT--EYKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVVQPGFVSEQQHMLTMEVVPVVPE--FKTELSTEVHARPQLTAGHETR 2333
BLAST of SMED30002653 vs. TrEMBL
Match: A0A4S2M563 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_003893 PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.354e-19 Identity = 70/317 (22.08%), Postives = 148/317 (46.69%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQF-LSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIV 948 +E +P+ P V+ + ++M + P +R G+ +E+E ++ +TP+V + + + QT+ + P + F + E P + V P+V ++ TQ+ D+ P V GF +++E ++ VTP + + + S++ ++ + + GY + E + +VP+V+ +++ T+++TE+ R G S + +P ++TPM + YK+R+ + +P + ++SE +++ + ++P V + T TDLT K PGF S + ++P+V Sbjct: 2034 EEHEHPITAVPYVRH--YKTRMERSLVAKPRLRPGYRSEMEHKQTFSVTPMVPEYRTTIEQTLPSV---PRLKPGFATEVERPISMDVVPVVP--EYKTQLSTDVPARPQVQRGFSSEREYIRSMSVTPMVPE--YESKLEHKVVERPVLEAGYASEGEHEHPMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPM--------------------------------TTEYKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVVQPGFVSEQQHMLTMEVVPVV 2309 HSP 2 Score: 93.9745 bits (232), Expect = 1.881e-16 Identity = 64/326 (19.63%), Postives = 151/326 (46.32%), Query Frame = 1 Query: 4 EVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK-GKNLTRHFS 978 EV P+ + + ++ +Q+ TD+ P V+ GF +E E + + +TP+V ++ S+ ++ P + + + S E + ++V P+V+ ++ T++ ++ + P GF ++ + +P +VTP + + +++ + + + GY++ +E T +E+VPVV + + T+++T++ V+ G S ++ M ++ P++ +K+ ++ E P+ + + + +E L +KQ Q + T L + S T + + + +N++P+V + T HF+ Sbjct: 2107 EVERPISMDVVPVVPEYKTQLSTDVPARPQVQRGFSSEREYIRSMSVTPMV--PEYESKLEHKVVERPVLEAGYASEGEHEHPMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPMTTE--YKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVVQPGFVSEQQHMLTMEVVPVV--------------------------------PEFKTELSTEVHARPQLTAGHETRLDYERQLQWETELKQYQ--SAVSTRLPSRPSLTSVYSATLEHETSMNVVPVVPYDERFTSHFT 2394 HSP 3 Score: 85.5001 bits (210), Expect = 9.188e-14 Identity = 48/195 (24.62%), Postives = 107/195 (54.87%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESR 585 +E + + +TPMV + + S++ + P + G+ +E E + + + P+VR++++ ++ TE+ P F S +P + VTP+ ++ T+ME + ++PI+ +G+ +++E +V P + + +++T +++ V G+ + ++ ++E+VPVV E F T++STE+ + G E+R Sbjct: 2145 REYIRSMSVTPMVPEYE--SKLEHKVVERPVLEAGYASEGEHEHPMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPMTT--EYKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVVQPGFVSEQQHMLTMEVVPVVPE--FKTELSTEVHARPQLTAGHETR 2333
BLAST of SMED30002653 vs. TrEMBL
Match: A0A4S2M574 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_003893 PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.497e-19 Identity = 70/317 (22.08%), Postives = 148/317 (46.69%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQF-LSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIV 948 +E +P+ P V+ + ++M + P +R G+ +E+E ++ +TP+V + + + QT+ + P + F + E P + V P+V ++ TQ+ D+ P V GF +++E ++ VTP + + + S++ ++ + + GY + E + +VP+V+ +++ T+++TE+ R G S + +P ++TPM + YK+R+ + +P + ++SE +++ + ++P V + T TDLT K PGF S + ++P+V Sbjct: 2034 EEHEHPITAVPYVRH--YKTRMERSLVAKPRLRPGYRSEMEHKQTFSVTPMVPEYRTTIEQTLPSV---PRLKPGFATEVERPISMDVVPVVP--EYKTQLSTDVPARPQVQRGFSSEREYIRSMSVTPMVPE--YESKLEHKVVERPVLEAGYASEGEHEHPMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPM--------------------------------TTEYKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVVQPGFVSEQQHMLTMEVVPVV 2309 HSP 2 Score: 93.9745 bits (232), Expect = 1.866e-16 Identity = 64/326 (19.63%), Postives = 151/326 (46.32%), Query Frame = 1 Query: 4 EVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK-GKNLTRHFS 978 EV P+ + + ++ +Q+ TD+ P V+ GF +E E + + +TP+V ++ S+ ++ P + + + S E + ++V P+V+ ++ T++ ++ + P GF ++ + +P +VTP + + +++ + + + GY++ +E T +E+VPVV + + T+++T++ V+ G S ++ M ++ P++ +K+ ++ E P+ + + + +E L +KQ Q + T L + S T + + + +N++P+V + T HF+ Sbjct: 2107 EVERPISMDVVPVVPEYKTQLSTDVPARPQVQRGFSSEREYIRSMSVTPMV--PEYESKLEHKVVERPVLEAGYASEGEHEHPMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPMTTE--YKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVVQPGFVSEQQHMLTMEVVPVV--------------------------------PEFKTELSTEVHARPQLTAGHETRLDYERQLQWETELKQYQ--SAVSTRLPSRPSLTSVYSATLEHETSMNVVPVVPYDERFTSHFT 2394 HSP 3 Score: 85.5001 bits (210), Expect = 9.114e-14 Identity = 48/195 (24.62%), Postives = 107/195 (54.87%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESR 585 +E + + +TPMV + + S++ + P + G+ +E E + + + P+VR++++ ++ TE+ P F S +P + VTP+ ++ T+ME + ++PI+ +G+ +++E +V P + + +++T +++ V G+ + ++ ++E+VPVV E F T++STE+ + G E+R Sbjct: 2145 REYIRSMSVTPMVPEYE--SKLEHKVVERPVLEAGYASEGEHEHPMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPMTT--EYKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVVQPGFVSEQQHMLTMEVVPVVPE--FKTELSTEVHARPQLTAGHETR 2333
BLAST of SMED30002653 vs. TrEMBL
Match: G7Y4Z3 (Titin OS=Clonorchis sinensis OX=79923 GN=CLF_101087 PE=4 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.856e-19 Identity = 69/317 (21.77%), Postives = 151/317 (47.63%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQF-LSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIV 948 +E +P+ P V+ + ++M + P +R G+ +E+E ++ L +TP+V + + + QT+ + P + F + E P + V P+V ++ TQ+ ++ P V GF +++E ++ VTP + + + +++ ++ + + GY + +E ++ +VP+V+ +++ T+++TE+ R G S + +P ++TPM + YK+R+ + +P + ++SE +++ + ++P V + T TDLT K PGF S + ++P+V Sbjct: 2018 EEHEHPITAVPYVRH--YKTRMERSLAAKPRLRPGYRSEMEHKQTLSVTPMVPEYRTTIEQTLPSV---PRLKPGFATEVERPISMDVVPVVP--EYKTQLSTEVPARPQVQRGFSSEREYIRSMSVTPMVPE--YETKLEHKVVERPVLEAGYASEEEHEHAMNVVPLVRRTEYKTELATEVPSRPTARPGFASEATVPRPIEVTPM--------------------------------TTEYKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVTQPGFVSEQQHMLTMEVVPVV 2293 HSP 2 Score: 92.0485 bits (227), Expect = 6.954e-16 Identity = 64/330 (19.39%), Postives = 152/330 (46.06%), Query Frame = 1 Query: 4 EVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSH----HPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK-GKNLTRHFS 978 EV P+ + + ++ +Q+ T++ P V+ GF +E E + + +TP+V + + T+L H P + + + S +E + ++V P+V+ ++ T++ ++ + P GF ++ + +P +VTP + + +++ + + + GY++ +E T +E+VPVV + + T+++T++ + G S ++ M ++ P++ +K+ ++ E P+ + + + +E L +KQ Q + +T L + S T + + + +N++P+V + T HF+ Sbjct: 2091 EVERPISMDVVPVVPEYKTQLSTEVPARPQVQRGFSSEREYIRSMSVTPMVPEYE------TKLEHKVVERPVLEAGYASEEEHEHAMNVVPLVRRTEYKTELATEVPSRPTARPGFASEATVPRPIEVTPMTTE--YKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVTQPGFVSEQQHMLTMEVVPVV--------------------------------PEFKTELSTEVHARPQLTTGHETRLDYERQLQWETELKQYQ--SAVETRLPSRPSLTSVYSATLEHETSMNVVPVVPYDERFTSHFT 2378 HSP 3 Score: 83.1889 bits (204), Expect = 5.271e-13 Identity = 46/195 (23.59%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESR 585 +E + + +TPMV + + +++ + P + G+ +E E + + + P+VR++++ ++ TE+ P F S +P + VTP+ ++ T+ME + ++PI+ +G+ +++E +V P + + +++T +++ G+ + ++ ++E+VPVV E F T++STE+ + G E+R Sbjct: 2129 REYIRSMSVTPMVPEYE--TKLEHKVVERPVLEAGYASEEEHEHAMNVVPLVRRTEYKTELATEVPSRPTARPGFASEATVPRPIEVTPMTT--EYKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVTQPGFVSEQQHMLTMEVVPVVPE--FKTELSTEVHARPQLTTGHETR 2317
BLAST of SMED30002653 vs. TrEMBL
Match: A0A419PWM3 (Muscle M-line assembly protein unc-89 (Fragment) OS=Clonorchis sinensis OX=79923 GN=unc-89 PE=4 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.574e-19 Identity = 69/317 (21.77%), Postives = 151/317 (47.63%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQF-LSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIV 948 +E +P+ P V+ + ++M + P +R G+ +E+E ++ L +TP+V + + + QT+ + P + F + E P + V P+V ++ TQ+ ++ P V GF +++E ++ VTP + + + +++ ++ + + GY + +E ++ +VP+V+ +++ T+++TE+ R G S + +P ++TPM + YK+R+ + +P + ++SE +++ + ++P V + T TDLT K PGF S + ++P+V Sbjct: 2034 EEHEHPITAVPYVRH--YKTRMERSLAAKPRLRPGYRSEMEHKQTLSVTPMVPEYRTTIEQTLPSV---PRLKPGFATEVERPISMDVVPVVP--EYKTQLSTEVPARPQVQRGFSSEREYIRSMSVTPMVPE--YETKLEHKVVERPVLEAGYASEEEHEHAMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPM--------------------------------TTEYKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVTQPGFVSEQQHMLTMEVVPVV 2309 HSP 2 Score: 91.6633 bits (226), Expect = 9.133e-16 Identity = 64/330 (19.39%), Postives = 152/330 (46.06%), Query Frame = 1 Query: 4 EVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSH----HPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK-GKNLTRHFS 978 EV P+ + + ++ +Q+ T++ P V+ GF +E E + + +TP+V + + T+L H P + + + S +E + ++V P+V+ ++ T++ ++ + P GF ++ + +P +VTP + + +++ + + + GY++ +E T +E+VPVV + + T+++T++ + G S ++ M ++ P++ +K+ ++ E P+ + + + +E L +KQ Q + +T L + S T + + + +N++P+V + T HF+ Sbjct: 2107 EVERPISMDVVPVVPEYKTQLSTEVPARPQVQRGFSSEREYIRSMSVTPMVPEYE------TKLEHKVVERPVLEAGYASEEEHEHAMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPMTTE--YKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVTQPGFVSEQQHMLTMEVVPVV--------------------------------PEFKTELSTEVHARPQLTTGHETRLDYERQLQWETELKQYQ--SAVETRLPSRPSLTSVYSATLEHETSMNVVPVVPYDERFTSHFT 2394 HSP 3 Score: 82.8037 bits (203), Expect = 5.957e-13 Identity = 46/195 (23.59%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESR 585 +E + + +TPMV + + +++ + P + G+ +E E + + + P+VR++++ ++ TE+ P F S +P + VTP+ ++ T+ME + ++PI+ +G+ +++E +V P + + +++T +++ G+ + ++ ++E+VPVV E F T++STE+ + G E+R Sbjct: 2145 REYIRSMSVTPMVPEYE--TKLEHKVVERPVLEAGYASEEEHEHAMNVVPLVRRTEYKTELATEVPSRPTARPGFASETTVPRPIEVTPMTT--EYKTRMERRMPSYPILEAGYSSEEEYQTRMEVVPVVPHTSYRTEMTTDLTAKPVTQPGFVSEQQHMLTMEVVPVVPE--FKTELSTEVHARPQLTTGHETR 2333
BLAST of SMED30002653 vs. Planmine SMEST
Match: SMESG000005752.1 (SMESG000005752.1) HSP 1 Score: 748.043 bits (1930), Expect = 0.000e+0 Identity = 364/379 (96.04%), Postives = 370/379 (97.63%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVKGKNLTRHFSITDDTKFDAYLSNNNFAFQMNVLPLKYKSNKLNKCQSISIRKISVFDLLETST 1137 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVKGKNLTRHFSITDDTKFDAYLSNNNFAFQMNVLPLKYKSNKLNK S+ +S++ L +T + Sbjct: 3153 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVKGKNLTRHFSITDDTKFDAYLSNNNFAFQMNVLPLKYKSNKLNKSDEGSL-SMSIYSLTKTES 3530 HSP 2 Score: 282.337 bits (721), Expect = 4.805e-84 Identity = 145/335 (43.28%), Postives = 219/335 (65.37%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMIL---------TDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVKGKNLTRHFS 978 KEVMNPLQITPMVKQSQF SQ+ TD+YHHPDV TGF++E +Q +LEITP+VR+SQFLSQ T+L HHPD++S ++S+KE+ N L +TP+VK QFL+Q D+ +HP V+SG+D+ KE++ P +TP +K++ FLSQ + ++ H DV+ G+++ K+I +LEI P+V+ESQFL+Q+ST++ + V G +S +E+M P ITPM+ TD+ +P +++ K ++N + + K S + S+++ + P+ S ++S+ + N L I P VKQ QF++ TDL T GF+S + +L I P+VK S Sbjct: 2451 KEVMNPLQITPMVKQSQFLSQISTDLYHHPDVTTGFDSEKNLQNNLEITPMVRESQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKESQFLSQASTDLYHHPDVTTGFDSEKDIQKNLEITPMVRESQFLSQVSTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQMSTDLYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQVSTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQISTDLYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQLS 2785 HSP 3 Score: 275.789 bits (704), Expect = 9.630e-82 Identity = 142/326 (43.56%), Postives = 214/326 (65.64%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMIL---------TDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK 951 KEVMNPLQITPMVKQSQF SQM TD+YHHPDV TGF++E +Q +LEITP+V+QSQFLSQ T+L HHPD++S ++S+KE+ N L +TP+VK QFL+Q+ D+ +HP V +GFD++K + ++TP +K + FLSQ++ ++ H DV GY+++KE+ L+I P+VK+SQFL+Q+ST++C + V G +S +E+M P ITPM+ TD+ +P Y++ + I+ + + + S + S+++ + P S ++S+ + N L I VKQ QF++ TDL T GF+S + +L I P+VK Sbjct: 2646 KEVMNPLQITPMVKQSQFLSQMSTDLYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQVSTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQISTDLYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQLSTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQMSTDLCHHPNVVSGYDSDKEVMNPLQITPMVKQSQFLSQASTDLYHHPDVTTGYDSVRDIQKNLEVTPMVRESQFLSQVSTDLYHHPNVVSGYDSDKEVMNPLQITAMVKQSQFLSQMSTDLYHHPDVTTGFDSEKNLQNNLEITPMVK 2971 HSP 4 Score: 274.248 bits (700), Expect = 2.898e-81 Identity = 154/380 (40.53%), Postives = 233/380 (61.32%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMI-------LTDIDGYPLPNV--PYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK--------GKNLTRHFSITDDTKFDAYLSNNNFAFQMNVLPLKYKSNKLNKCQS 1089 KEVMNPLQITPMVKQSQF SQM TD+YHHPDV TGF++E +Q +LEITP+V+QSQFLSQ T+L HHPD++S ++S+KE+ N L +TP+VK QFL+Q D+ +HP V+SG+D+ KE++ P +TP +K + FLSQI+ ++ H DV+ G+++ K + +LEI P+V+ESQFL+Q ST++ + V G +S +E+M P ITPM+ D Y P+V Y+++K + N + + K S + S+ + + P+ + F+SE + +L I P V++ QF++ TDL G++S + L I P+VK +L H +T T FD S N + + P+ +S L++ + Sbjct: 2334 KEVMNPLQITPMVKQSQFLSQMITDLYHHPDVTTGFDSEKILQNNLEITPMVKQSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEVMNPLQITPMVKQSQFLSQISTDLYHHPDVTTGFDSEKNLQNNLEITPMVRESQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKESQFLSQASTDLYHHPDVTTGFDSEKDIQKNLEITPMVRESQFLSQVSTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQMSTDLYHHPDVT--TGFD---SEKNLQNNLEITPMVKQSQFLSQVST 2708 HSP 5 Score: 265.388 bits (677), Expect = 4.452e-78 Identity = 141/326 (43.25%), Postives = 211/326 (64.72%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPM---------ILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK 951 KEVMNPL ITPMVKQSQF SQM TD+YHHPDV TGF++E +Q +LEITP+V++SQFLSQ T+L HHPD++S ++S+KE+ N L +TP+VK QFL+QM D+ +HP V +GFD++K + ++TP +K + FLSQ + ++ H DV GY+++KE+ L+I P+VK+SQFL+Q ST++ + V G +S +E+M P ITPM I TD+ +P +++ K ++N + + + S + S+ + + P+ S ++S+ + N L I P VKQ QF++ A TDL G++S + L I P+VK Sbjct: 2256 KEVMNPLLITPMVKQSQFLSQMSTDLYHHPDVTTGFDSEKILQNNLEITPMVKRSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQMITDLYHHPDVTTGFDSEKILQNNLEITPMVKQSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEVMNPLQITPMVKQSQFLSQISTDLYHHPDVTTGFDSEKNLQNNLEITPMVRESQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVK 2581 HSP 6 Score: 259.61 bits (662), Expect = 3.501e-76 Identity = 140/328 (42.68%), Postives = 211/328 (64.33%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMI-------LTDIDGYPLPNV--PYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVKGK 957 KEVMNPLQIT MVKQSQF SQM TD+YHHPDV TGF++E +Q +LEITP+V+QSQFLSQ T+L HHPD++S ++S+KE+ N L +TP+VK QFL+QM D+ +HP + GFD++K + ++TP +K + FLSQ + ++ H +V GY+++KEI L+I P+VK+SQFL+Q ST++ + V G +S +E+M P ITPM+ Y P+V Y+++K + N + + K S + S++ + P+ + F +E++ + DL I P V+Q QF++ T+L+ FES + L++ PIVK + Sbjct: 2919 KEVMNPLQITAMVKQSQFLSQMSTDLYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQMSTDLYHHPDITVGFDSEKILQNNLEITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEIMNPLQITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEIMNPLRITPMVKQSQFLSQASTGLYHHPDVLSGYDSDKEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHR 3246 HSP 7 Score: 259.225 bits (661), Expect = 4.989e-76 Identity = 139/326 (42.64%), Postives = 209/326 (64.11%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMI-------LTDIDGYPLPNV--PYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK 951 KEVMNPLQITPMVKQSQF SQ TD+YHHPDV TG+++ +IQK+LE+TP+VR+SQFLSQ T+L HHP+++S ++S+KE+ N L +T +VK QFL+QM D+ +HP V +GFD++K + ++TP +K + FLSQ + ++ H DV GY+++KE+ L+I P+VK+SQFL+Q+ST++ + + +G +S + L +ITPM+ D Y PNV Y+++K I N + + K S + S+ + + P S ++S+ + N L I P VKQ QF++ A T L G++S + L I P+VK Sbjct: 2841 KEVMNPLQITPMVKQSQFLSQASTDLYHHPDVTTGYDSVRDIQKNLEVTPMVRESQFLSQVSTDLYHHPNVVSGYDSDKEVMNPLQITAMVKQSQFLSQMSTDLYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQMSTDLYHHPDITVGFDSEKILQNNLEITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEIMNPLQITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEIMNPLRITPMVKQSQFLSQASTGLYHHPDVLSGYDSDKEVMNPLQITPMVK 3166 HSP 8 Score: 256.914 bits (655), Expect = 3.193e-75 Identity = 133/326 (40.80%), Postives = 211/326 (64.72%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMIL---------TDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK 951 KEVMNPLQITPMVKQSQF SQM TD+ HHP+V +G++++ E+ L+ITP+V+QSQFLSQ T+L HHPD+ + ++S +++ L VTP+V+ QFL+Q+ D+ +HP V+SG+D+ KE++ P +T +K + FLSQ++ ++ H DV+ G+++ K + +LEI P+VK+SQFL+Q ST++ + V G +S +E+M P ITPM+ TD+ +P V +++ K+++N + + K S + S+ + + P S ++S+ + N L I P VKQ QF++ A TDL + G++S + L I P+VK Sbjct: 2802 KEVMNPLQITPMVKQSQFLSQMSTDLCHHPNVVSGYDSDKEVMNPLQITPMVKQSQFLSQASTDLYHHPDVTTGYDSVRDIQKNLEVTPMVRESQFLSQVSTDLYHHPNVVSGYDSDKEVMNPLQITAMVKQSQFLSQMSTDLYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQMSTDLYHHPDITVGFDSEKILQNNLEITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEIMNPLQITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEIMNPLRITPMVK 3127 HSP 9 Score: 256.914 bits (655), Expect = 3.651e-75 Identity = 138/326 (42.33%), Postives = 208/326 (63.80%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMI-------LTDIDGYPLPNV--PYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK 951 KE++ PLQITPMVKQSQF SQM T++YHHPDV TGF++E +Q +LEITP+V+QSQFLSQ T L HHPD++S ++S+KE+ N L +TP+VK QFL+QM D+ +HP V +GFD++K + ++TP +K + FLSQ + ++ H DV GY+++KE+ L+I P+VK+SQFL+Q+ T++ + V G +S + L +ITPM+ D Y P+V Y+++K + N + + K S + S+ + + P S ++S+ + N L I P VKQ QF++ TDL T GF+S + +L I P+V+ Sbjct: 2178 KEILKPLQITPMVKQSQFLSQMSTELYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQASTNLCHHPDVVSGYDSDKEVMNPLLITPMVKQSQFLSQMSTDLYHHPDVTTGFDSEKILQNNLEITPMVKRSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQMITDLYHHPDVTTGFDSEKILQNNLEITPMVKQSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEVMNPLQITPMVKQSQFLSQISTDLYHHPDVTTGFDSEKNLQNNLEITPMVR 2503 HSP 10 Score: 253.832 bits (647), Expect = 3.558e-74 Identity = 128/326 (39.26%), Postives = 209/326 (64.11%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMI---------LTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK 951 KEVMNPLQITPMVKQSQF SQM TD+YHHPD+ GF++E +Q +LEITP+V+QSQFLSQ T+L HHP+++S ++S+KE+ N L +TP+VK QFL+Q D+ +HP V+SG+D+ KEI+ P +TP +K + FLSQ + + H DV GY+++KE+ L+I P+VK+SQF +Q+ T+I + VR G E+ E+ K +ITP++ +T++ +P +E+NK + N + + K+ + +++ + P S F+++ + + P++K + F++ ++++ + G+ + + L I+P+VK Sbjct: 2997 KEVMNPLQITPMVKQSQFLSQMSTDLYHHPDITVGFDSEKILQNNLEITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEIMNPLQITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEIMNPLRITPMVKQSQFLSQASTGLYHHPDVLSGYDSDKEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVK 3322 HSP 11 Score: 250.751 bits (639), Expect = 4.318e-73 Identity = 135/326 (41.41%), Postives = 203/326 (62.27%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMIL---------TDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK 951 KE+ L+ITPMVKQS+F SQM T++YHHP+V TGF++ IEI+K LEITP+ +Q QFLSQ T L HHPD+ F+S K++ L +TP+VK QFL+Q D+ +HP V+S +D +KE+ KP +TP +K + FLSQ + + H DV+ G+++ K I SLEI P+VK+SQFL+Q ST++C + + G +S +E++KP ITPM+ T++ +P +++ K ++N + + K S + S+ + P+ S ++S+ + N L I P VKQ QF++ TDL T GF+S +L I P+VK Sbjct: 1983 KEINKSLEITPMVKQSKFLSQMNTELYHHPEVMTGFDSNIEIKKGLEITPMFKQCQFLSQASTNLYHHPDVTRGFDSEKDINKSLEITPMVKQSQFLSQASTDLCHHPDVVSVYDCEKEVTKPLQITPMVKQSQFLSQTSTNLYHHPDVTTGFDSEKNINRSLEITPMVKQSQFLSQASTDLCLHPNIVSGYDSDKEILKPLQITPMVKQSQFLSQMSTELYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQASTNLCHHPDVVSGYDSDKEVMNPLLITPMVKQSQFLSQMSTDLYHHPDVTTGFDSEKILQNNLEITPMVK 2308 HSP 12 Score: 248.054 bits (632), Expect = 3.373e-72 Identity = 126/317 (39.75%), Postives = 198/317 (62.46%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMILTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK 951 K++ L+ITPMV++SQF SQ+ TD+YHHPDV +G++++ E+ L+ITP+V+QSQFLSQ T+L HHPD+ + F+S K + N L +TP+VK QFL+Q+ D+ +HP V+SG+D+ KE++ P +TP +K + FLSQI+ ++ H DV+ G+++ K + +LEI P+VK+SQFL+Q+ST++ + V G +S +E+M P ITPM+ K S + S+++ + P S ++S+ + N L I P VKQ QF++ A TDL T G++SV D +L + P+V+ Sbjct: 2607 KDIQKNLEITPMVRESQFLSQVSTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQMSTDLYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQVSTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQISTDLYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQLSTDLYHHPDVVSGYDSDKEVMNPLQITPMV------------------------------KQSQFLSQMSTDLCHHPNVVSGYDSDKEVMNPLQITPMVKQSQFLSQASTDLYHHPDVTTGYDSVRDIQKNLEVTPMVR 2893 HSP 13 Score: 245.358 bits (625), Expect = 3.011e-71 Identity = 140/380 (36.84%), Postives = 226/380 (59.47%), Query Frame = 1 Query: 1 KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMI---------LTDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK--------GKNLTRHFSITDDTKFDAYLSNNNFAFQMNVLPLKYKSNKLNKCQS 1089 K + L+ITPMVKQSQF SQ TD+ HP++ +G++++ EI K L+ITP+V+QSQFLSQ TEL HHPD+ + F+S K + N L +TP+VK QFL+Q ++ +HP V+SG+D+ KE++ P +TP +K + FLSQ++ ++ H DV+ G+++ K + +LEI P+VK SQFL+Q ST++ + V G +S +E+M P ITPM+ +TD+ +P +++ K+++N + + K S + S+ + + P+ S ++S+ + N L I P VKQ QF++ A TDL + G++S + L I P+VK +L H +T T FD S N + + P+ +S L++ + Sbjct: 2139 KNINRSLEITPMVKQSQFLSQASTDLCLHPNIVSGYDSDKEILKPLQITPMVKQSQFLSQMSTELYHHPDVTTGFDSEKNLQNNLEITPMVKQSQFLSQASTNLCHHPDVVSGYDSDKEVMNPLLITPMVKQSQFLSQMSTDLYHHPDVTTGFDSEKILQNNLEITPMVKRSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQMITDLYHHPDVTTGFDSEKILQNNLEITPMVKQSQFLSQASTDLYHHPDVVSGYDSDKEVMNPLQITPMVKQSQFLSQASTDLYHHPNVVSGYDSDKEVMNPLQITPMVKQSQFLSQISTDLYHHPDVT--TGFD---SEKNLQNNLEITPMVRESQFLSQAST 2513 HSP 14 Score: 225.713 bits (574), Expect = 1.990e-64 Identity = 131/325 (40.31%), Postives = 194/325 (59.69%), Query Frame = 1 Query: 4 EVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMI-------LTDIDGYPLPNV--PYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK 951 E+ ++ TPMVKQS F SQ T++ +HP V GFE+E EI K LEITP+VR+SQFLSQ T L HHPD+ S F+S KE+ L +TP+VK +FL+QM ++ +HP V++GFD+ EI K ++TP K FLSQ + + H DV+ G+++ K+I SLEI P+VK+SQFL+Q ST++C + V + +E+ KP ITPM+ T + Y P+V +++ K I + + K S + S+ + + P S ++S+ + L I P VKQ QF++ T+L T GF+S + +L I P+VK Sbjct: 1906 EIEKSMEFTPMVKQSNFLSQRSTELNNHPSVTVGFESEKEIAKQLEITPLVRESQFLSQMSTNLYHHPDVTSGFDSEKEINKSLEITPMVKQSKFLSQMNTELYHHPEVMTGFDSNIEIKKGLEITPMFKQCQFLSQASTNLYHHPDVTRGFDSEKDINKSLEITPMVKQSQFLSQASTDLCHHPDVVSVYDCEKEVTKPLQITPMVKQSQFLSQTSTNLYHHPDVTTGFDSEKNINRSLEITPMVKQSQFLSQASTDLCLHPNIVSGYDSDKEILKPLQITPMVKQSQFLSQMSTELYHHPDVTTGFDSEKNLQNNLEITPMVK 2230 HSP 15 Score: 193.356 bits (490), Expect = 2.383e-53 Identity = 127/379 (33.51%), Postives = 202/379 (53.30%), Query Frame = 1 Query: 4 EVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMIL---------TDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK--------GKNLTRHFSITDDTKFDAYLSNNNFAFQMNVLPLKYKSNKLNKCQS 1089 ++ + I + K S+F S + D+ DV +G ++ EI+K +E TP+V+QS FLSQ TEL++HP + FES KE+ L +TP+V+ QFL+QM ++ +HP V SGFD++KEI K ++TP +K + FLSQ+ E+ H +V G+++N EI LEI P+ K+ QFL+Q ST + + V G +S +++ K +ITPM+ TD+ +P Y+ K + + + K S + S+ + P+ + F+SE L I P VKQ QF++ A TDL + G++S + L I P+VK L H +T T FD S N + + P+ +S L++ + Sbjct: 1867 DIFKTMDILLVGKTSRFLSHINADLSKQLDVISGCQSITEIEKSMEFTPMVKQSNFLSQRSTELNNHPSVTVGFESEKEIAKQLEITPLVRESQFLSQMSTNLYHHPDVTSGFDSEKEINKSLEITPMVKQSKFLSQMNTELYHHPEVMTGFDSNIEIKKGLEITPMFKQCQFLSQASTNLYHHPDVTRGFDSEKDINKSLEITPMVKQSQFLSQASTDLCHHPDVVSVYDCEKEVTKPLQITPMVKQSQFLSQTSTNLYHHPDVTTGFDSEKNINRSLEITPMVKQSQFLSQASTDLCLHPNIVSGYDSDKEILKPLQITPMVKQSQFLSQMSTELYHHPDVT--TGFD---SEKNLQNNLEITPMVKQSQFLSQAST 2240 HSP 16 Score: 166.007 bits (419), Expect = 4.815e-44 Identity = 105/320 (32.81%), Postives = 180/320 (56.25%), Query Frame = 1 Query: 19 LQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICENFGVRLGLESREELMKPKDITPMIL---------TDIDGYPLPNVPYENNKVIENFMGTSSTDKNSHYKSRINKEKKRFPETFSRFNSEMKFENDLHIIPSVKQDQFITIADTDLTEKVSFTPGFESVFDKSFDLNIIPIVK 951 ++I P K S+F + + D+ P+V G E+ ++I K ++I V + S+FLS +LS D++S +S E+ + TP+VK FL+Q +++NHP V GF+++KEI K ++TP ++++ FLSQ++ + H DV+ G+++ KEI SLEI P+VK+S+FL+Q++TE+ + V G +S E+ K +ITPM T++ +P +++ K I + + K S + S+ + + P+ S ++ E + L I P VKQ QF++ T+L T GF+S + + L I P+VK Sbjct: 1835 MEIVPFTKTSKFKALLEYDL--KPEVICGTESNVDIFKTMDILLVGKTSRFLSHINADLSKQLDVISGCQSITEIEKSMEFTPMVKQSNFLSQRSTELNNHPSVTVGFESEKEIAKQLEITPLVRESQFLSQMSTNLYHHPDVTSGFDSEKEINKSLEITPMVKQSKFLSQMNTELYHHPEVMTGFDSNIEIKKGLEITPMFKQCQFLSQASTNLYHHPDVTRGFDSEKDINKSLEITPMVKQSQFLSQASTDLCHHPDVVSVYDCEKEVTKPLQITPMVKQSQFLSQTSTNLYHHPDVTTGFDSEKNINRSLEITPMVK 2152 HSP 17 Score: 88.9669 bits (219), Expect = 1.858e-18 Identity = 53/174 (30.46%), Postives = 99/174 (56.90%), Query Frame = 1 Query: 43 QSQFFSQMCTDIYHHPDVRTGFETEIE--IQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAK--KEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFLTQISTEICE 552 QS F + +I H P + TG+E+ E +LEITP+V++ L+ + ++ + + S+ E+ + L +TP+VK FL++++ +S P V GF+ + KEI P ++TP +K++ F++++TAEI + Y T E +L++ P+VK++ F T + T + + Sbjct: 3727 QSYFTTTTQQNIVHRPLLSTGYESGSENIFINNLEITPIVKEKNILTTVVRPITQRTKAIPSYHSDFELNSELQITPMVKQSTFLSKVDNYVSIKPEVQKGFETQVTKEI--PMEITPIVKESTFVNKVTAEIPRRHSTQKAYETVIEKQRTLDVTPMVKQTSFKTTVQTNVVD 3898 HSP 18 Score: 73.559 bits (179), Expect = 1.784e-13 Identity = 55/209 (26.32%), Postives = 99/209 (47.37%), Query Frame = 1 Query: 4 EVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPVVRQSQFLSQTITELSHHPDILSCFESNKEMPNILHVTPIVKHRQFLTQMEADISNHPIVISGFDAKKEILKPFDVTPTIKDNLFLSQITAEISQHSDVSCGYNTNKEIFTSLEIVPVVKESQFL--TQISTEICENFGVRLGLESREELMKPKDITPMI 624 E+ + LQITPMVKQS F S++ + P+V+ GFET++ + +EITP+V++S F+++ E+ +E+ E L VTP+VK F T ++ ++ + S + D+ KD SD+ C + T E+ S + + + Q+ T + ++ + G +S E +P D+ P++ Sbjct: 3794 ELNSELQITPMVKQSTFLSKVDNYVSIKPEVQKGFETQVTKEIPMEITPIVKESTFVNKVTAEIPRRHSTQKAYETVIEKQRTLDVTPMVKQTSFKTTVQTNVVDKCFTSSAY---------LDIVSLRKD-----------KSPSDLPC-FETTIELPKSKKSSLTIPKRQYYHSTHLLAKVPRTIKAQSGFDSTLEFNRPLDVVPVV 3981 The following BLAST results are available for this feature:
BLAST of SMED30002653 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30002653 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30002653 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30002653 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30002653 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of SMED30002653 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of SMED30002653 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of SMED30002653 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30002653 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of SMED30002653 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30002653 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30002653 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30002653 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of SMED30002653 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30002653 ID=SMED30002653|Name=SMED30002653|organism=Schmidtea mediterranea sexual|type=transcript|length=1330bpback to top protein sequence of SMED30002653-orf-1 >SMED30002653-orf-1 ID=SMED30002653-orf-1|Name=SMED30002653-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=401bp KEVMNPLQITPMVKQSQFFSQMCTDIYHHPDVRTGFETEIEIQKDLEITPback to top |