NK homeobox 4
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30002616 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of NK homeobox 4 vs. Ensembl Human
Match: NKX2-6 (NK2 homeobox 6 [Source:HGNC Symbol;Acc:HGNC:32940]) HSP 1 Score: 53.5286 bits (127), Expect = 2.277e-7 Identity = 33/82 (40.24%), Postives = 42/82 (51.22%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMP----VTNYNNSGFSYSNIP 634 QVKIWFQNRRYK KRQ QDKSLE + +T ++ + + CL P +F P V+ Y+ G YS P Sbjct: 175 QVKIWFQNRRYKCKRQRQDKSLE----LAGHPLTPRRVAVPVLVRDGKPCLGPGPGAPAFPSPYSAAVSPYSCYG-GYSGAP 251
BLAST of NK homeobox 4 vs. Ensembl Human
Match: NKX2-3 (NK2 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:7836]) HSP 1 Score: 50.0618 bits (118), Expect = 3.894e-6 Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLE 469 QVKIWFQNRRYK KRQ QDKSLE Sbjct: 191 QVKIWFQNRRYKCKRQRQDKSLE 213
BLAST of NK homeobox 4 vs. Ensembl Human
Match: NKX2-3 (NK2 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:7836]) HSP 1 Score: 49.2914 bits (116), Expect = 4.831e-6 Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLE 469 QVKIWFQNRRYK KRQ QDKSLE Sbjct: 191 QVKIWFQNRRYKCKRQRQDKSLE 213
BLAST of NK homeobox 4 vs. Ensembl Zebrafish
Match: nkx2.7 (NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]) HSP 1 Score: 49.2914 bits (116), Expect = 2.631e-6 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEA 475 QVKIWFQNRRYK KRQ QDKSLE A Sbjct: 167 QVKIWFQNRRYKCKRQRQDKSLELA 191
BLAST of NK homeobox 4 vs. Ensembl Zebrafish
Match: nkx2.3 (NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]) HSP 1 Score: 49.2914 bits (116), Expect = 3.843e-6 Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEA 475 QVKIWFQNRRYK KRQ QDK+LE A Sbjct: 185 QVKIWFQNRRYKCKRQRQDKTLEMA 209
BLAST of NK homeobox 4 vs. Ensembl Zebrafish
Match: nkx2.3 (NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]) HSP 1 Score: 49.2914 bits (116), Expect = 3.843e-6 Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEA 475 QVKIWFQNRRYK KRQ QDK+LE A Sbjct: 185 QVKIWFQNRRYKCKRQRQDKTLEMA 209
BLAST of NK homeobox 4 vs. Ensembl Xenopus
Match: mtm1 (myotubularin 1 [Source:Xenbase;Acc:XB-GENE-1002030]) HSP 1 Score: 52.7582 bits (125), Expect = 2.357e-7 Identity = 38/105 (36.19%), Postives = 49/105 (46.67%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNT 715 QVKIWFQNRRYK KRQ QD+SLE V L + + CL P T +F+ P N + + ++Y G NS + G S+ M NT Sbjct: 137 QVKIWFQNRRYKCKRQKQDRSLELGHPIPPRRVAVPVLVR-----DGKPCLGP---TQTFASPY-NVSATPYTYPVCYGNYTNSPYYSGAPSVPTMGSQLISMNT 232
BLAST of NK homeobox 4 vs. Ensembl Xenopus
Match: NKX2-3 (NK2 homeobox 3 [Source:NCBI gene;Acc:100486189]) HSP 1 Score: 50.0618 bits (118), Expect = 2.591e-6 Identity = 22/26 (84.62%), Postives = 22/26 (84.62%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEAT 478 QVKIWFQNRRYK KRQ QDKSLE T Sbjct: 189 QVKIWFQNRRYKCKRQRQDKSLEMGT 214
BLAST of NK homeobox 4 vs. Ensembl Mouse
Match: Nkx2-3 (NK2 homeobox 3 [Source:MGI Symbol;Acc:MGI:97348]) HSP 1 Score: 50.447 bits (119), Expect = 1.733e-6 Identity = 22/26 (84.62%), Postives = 22/26 (84.62%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEAT 478 QVKIWFQNRRYK KRQ QDKSLE T Sbjct: 188 QVKIWFQNRRYKCKRQRQDKSLELGT 213
BLAST of NK homeobox 4 vs. TrEMBL
Match: A0A3G8G7N6 (NK homeobox 4 (Fragment) OS=Schmidtea mediterranea OX=79327 GN=nk4 PE=2 SV=1) HSP 1 Score: 390.578 bits (1002), Expect = 6.554e-131 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDXXXXXXXXXXXNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLF 1003 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDVAAAAAAAAVVNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLF Sbjct: 225 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDVAAAAAAAAVVNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLF 425
BLAST of NK homeobox 4 vs. TrEMBL
Match: A0A183AGR6 (Homeobox domain-containing protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS6151 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 8.656e-7 Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 2 Query: 386 NYIFIQVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGS 508 +Y F+QVKIWFQNRRYK+KRQAQDKS+EE T +S S Sbjct: 91 HYRFMQVKIWFQNRRYKVKRQAQDKSIEEVTALQHSVNCAS 131
BLAST of NK homeobox 4 vs. TrEMBL
Match: A0A448XKR9 (Homeobox domain-containing protein (Fragment) OS=Protopolystoma xenopodis OX=117903 GN=PXEA_LOCUS32472 PE=4 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.431e-6 Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSF 496 QVKIWFQNRRYK+KRQAQDKSLE+A ++ Sbjct: 16 QVKIWFQNRRYKVKRQAQDKSLEQAAALQHTL 47
BLAST of NK homeobox 4 vs. TrEMBL
Match: Q49QY1 (Tinman (Fragment) OS=Euprymna scolopes OX=6613 PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 9.486e-6 Identity = 35/78 (44.87%), Postives = 45/78 (57.69%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIP 634 QVKIWFQNRRYK KRQ QDKSLE +T V L + + CL + ++ +S P YN + F+YSN+P Sbjct: 198 QVKIWFQNRRYKCKRQRQDKSLEMSTMHPPRRVAVPVLVR-----DGKPCLGQSNVSPPYSTP---YNVNPFAYSNVP 267
BLAST of NK homeobox 4 vs. TrEMBL
Match: A0A4E0RAU0 (Homeobox protein Nkx-2.6 OS=Fasciola hepatica OX=6192 GN=D915_005726 PE=4 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 9.799e-6 Identity = 26/36 (72.22%), Postives = 30/36 (83.33%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGS 508 QVKIWFQNRRYK+KRQAQDKS+EEAT F ++ S Sbjct: 368 QVKIWFQNRRYKVKRQAQDKSIEEATVFQHNLRCSS 403
BLAST of NK homeobox 4 vs. Ensembl Cavefish
Match: ENSAMXT00000050209.1 (NK2 homeobox 6 [Source:NCBI gene;Acc:103037868]) HSP 1 Score: 51.2174 bits (121), Expect = 5.491e-7 Identity = 22/27 (81.48%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATG 481 QVKIWFQNRRYK KRQ QD+SLE A G Sbjct: 165 QVKIWFQNRRYKCKRQRQDRSLELAGG 191
BLAST of NK homeobox 4 vs. Ensembl Cavefish
Match: nkx2.3 (NK2 homeobox 3 [Source:NCBI gene;Acc:103034978]) HSP 1 Score: 49.2914 bits (116), Expect = 3.304e-6 Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEA 475 QVKIWFQNRRYK KRQ QDK+LE A Sbjct: 192 QVKIWFQNRRYKCKRQRQDKTLEMA 216
BLAST of NK homeobox 4 vs. Ensembl Medaka
Match: nkx2.7 (NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]) HSP 1 Score: 50.447 bits (119), Expect = 2.694e-7 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEA 475 QVKIWFQNRRYK KRQ QDKSLE A Sbjct: 60 QVKIWFQNRRYKCKRQRQDKSLELA 84
BLAST of NK homeobox 4 vs. Ensembl Medaka
Match: NKX2-3 (homeobox protein Nkx-2.5-like [Source:NCBI gene;Acc:111947865]) HSP 1 Score: 50.8322 bits (120), Expect = 1.118e-6 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEA 475 QVKIWFQNRRYK KRQ QDKSLE A Sbjct: 211 QVKIWFQNRRYKCKRQRQDKSLEAA 235
BLAST of NK homeobox 4 vs. Ensembl Medaka
Match: nkx2.3 (NK2 homeobox 3 [Source:NCBI gene;Acc:101163760]) HSP 1 Score: 50.0618 bits (118), Expect = 1.761e-6 Identity = 36/110 (32.73%), Postives = 51/110 (46.36%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCL------NPNEITNS-----FSMPVTNYNNSGF------SYSNIPGRMPNSIFNHGVNSM 679 QVKIWFQNRRYK KRQ QDK+LE A + ++ + R CL NP+ + P +YNNS + +YS++P P + + +M Sbjct: 200 QVKIWFQNRRYKCKRQRQDKTLEIAGHHHHHPPPPRRVAVPVLVRDGRPCLSGSQNYNPHYAVGAPNPYYSGYPTYSYNNSAYTNTYSCTYSSLPALPPTHTPTNALMTM 309
BLAST of NK homeobox 4 vs. Planmine SMEST
Match: SMESG000018735.1 (SMESG000018735.1) HSP 1 Score: 392.504 bits (1007), Expect = 1.175e-135 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDXXXXXXXXXXXNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ 1006 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDVAAAAAAAAVVNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ Sbjct: 198 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDVAAAAAAAAVVNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ 399
BLAST of NK homeobox 4 vs. Planmine SMEST
Match: SMESG000018735.1 (SMESG000018735.1) HSP 1 Score: 392.889 bits (1008), Expect = 2.400e-135 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDXXXXXXXXXXXNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ 1006 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDVAAAAAAAAVVNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ Sbjct: 223 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDVAAAAAAAAVVNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ 424
BLAST of NK homeobox 4 vs. Planmine SMEST
Match: SMESG000018735.1 (SMESG000018735.1) HSP 1 Score: 392.889 bits (1008), Expect = 2.679e-135 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 2 Query: 401 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDXXXXXXXXXXXNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ 1006 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDVAAAAAAAAVVNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ Sbjct: 225 QVKIWFQNRRYKMKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDVAAAAAAAAVVNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ 426
BLAST of NK homeobox 4 vs. Planmine SMEST
Match: SMESG000018735.1 (SMESG000018735.1) HSP 1 Score: 360.533 bits (924), Expect = 3.683e-126 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 2 Query: 437 MKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDXXXXXXXXXXXNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ 1006 MKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDVAAAAAAAAVVNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ Sbjct: 1 MKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMPVTNYNNSGFSYSNIPGRMPNSIFNHGVNSMWNMPESFYWNNTILNHPTESSAINQNMSTNSCLPKPYHYPDVAAAAAAAAVVNYPSWNEDPFKYVPQSGSLKLDSYSSTFRTMIENNNIKLNATADKFIPTPPTADLFQ 190 The following BLAST results are available for this feature:
BLAST of NK homeobox 4 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 3
BLAST of NK homeobox 4 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of NK homeobox 4 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of NK homeobox 4 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of NK homeobox 4 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 2
BLAST of NK homeobox 4 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of NK homeobox 4 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of NK homeobox 4 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of NK homeobox 4 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of NK homeobox 4 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of NK homeobox 4 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of NK homeobox 4 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of NK homeobox 4 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of NK homeobox 4 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 4
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30002616 ID=SMED30002616|Name=NK homeobox 4|organism=Schmidtea mediterranea sexual|type=transcript|length=1085bpback to top protein sequence of SMED30002616-orf-1 >SMED30002616-orf-1 ID=SMED30002616-orf-1|Name=SMED30002616-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=191bp MKRQAQDKSLEEATGFSNSFVTGSALSNASNSMNRRNCLNPNEITNSFSMback to top Annotated Terms
The following terms have been associated with this transcript:
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