Pre-mRNA-splicing factor RBM22

Overview
NamePre-mRNA-splicing factor RBM22
Smed IDSMED30002608
Length (bp)1366
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Pre-mRNA-splicing factor RBM22 (SMED30002608) t-SNE clustered cells

Violin plots show distribution of expression levels for Pre-mRNA-splicing factor RBM22 (SMED30002608) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Pre-mRNA-splicing factor RBM22 (SMED30002608) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Pre-mRNA-splicing factor RBM22 (SMED30002608) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30002608

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X2 cellSMED30002608h1SMcG0002017 SmedASXL_012383SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
epidermisSMED30002608h1SMcG0002017 dd_Smed_v4_4365_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Human
Match: RBM22 (RNA binding motif protein 22 [Source:HGNC Symbol;Acc:HGNC:25503])

HSP 1 Score: 446.817 bits (1148), Expect = 8.760e-155
Identity = 226/423 (53.43%), Postives = 286/423 (67.61%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEH---GKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAINSAXXXXXXXXXXTIGSATDARLS--------------VHYPSQDPNRFGAAVNKH 1286
            M +S  +N YNRQNWE +DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L    ++P+  VN+E+  Q +E+ +S S D T P   L   GK    +DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDK+ITTLY+GG+ ++I E +LR+ FYQ+GE+R++TV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q     E    G   SG  + P       +            N+    +PP      +N A   PP   PP                         +HYPSQDP R GA   KH
Sbjct:    1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNS-DGTRPVGML---GKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFN--LPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKH 417
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Human
Match: RBM22 (RNA binding motif protein 22 [Source:HGNC Symbol;Acc:HGNC:25503])

HSP 1 Score: 309.301 bits (791), Expect = 1.530e-101
Identity = 179/423 (42.32%), Postives = 237/423 (56.03%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQL---QSEIEHGKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAINSAXXXXXXXXXXTIGSATD--------------ARLSVHYPSQDPNRFGAAVNKH 1286
            M +S  +N YNRQNWE +DFPI                                               +CQ C       +  +   +YGLP+QVRD  L    ++P+  VN+E+  Q +E+ +S S D T P   L   GK    +DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDK+ITTLY+GG+ ++I E +LR+ FYQ+GE+R++TV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q    + + + G   SG  + P       +            N+    +PP      +N A   PP   PP                     A   +HYPSQDP R GA   KH
Sbjct:    1 MATSLGSNTYNRQNWEDADFPI-----------------------------------------------LCQTCLGENPYIR--MTKEKYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNS-DGTRPVGML---GKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYF--NLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKH 368
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Human
Match: RBM22 (RNA binding motif protein 22 [Source:HGNC Symbol;Acc:HGNC:25503])

HSP 1 Score: 251.136 bits (640), Expect = 1.350e-81
Identity = 118/189 (62.43%), Postives = 141/189 (74.60%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKP 638
            M +S  +N YNRQNWE +       TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L    ++P+  VN+E+  Q +E+ +S S D T P   L        +DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKP
Sbjct:    1 MATSLGSNTYNRQNWEDA-------TCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNS-DGTRPVGMLGKA--TSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKP 179
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Human
Match: RBM22 (RNA binding motif protein 22 [Source:HGNC Symbol;Acc:HGNC:25503])

HSP 1 Score: 163.696 bits (413), Expect = 6.188e-47
Identity = 69/105 (65.71%), Postives = 86/105 (81.90%), Query Frame = 3 
Query:  126 DFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQ 440
            DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L    ++P+  VN+E+  Q +E+
Sbjct:  138 DFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMER 242
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Human
Match: U2SURP (U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855])

HSP 1 Score: 51.6026 bits (122), Expect = 1.713e-6
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 3 
Query:  762 DKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTV-YPR--------QRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            D S T LY+G +   + E+ L   F ++G L SV + +PR        + C FV F  R  AERA +    K+IM+ + + + WGKA
Sbjct:  270 DPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE-MKLGWGKA 355
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Celegans
Match: rbm-22 (RNA Binding Motif protein homolog [Source:UniProtKB/TrEMBL;Acc:A0A061ACS6])

HSP 1 Score: 385.185 bits (988), Expect = 4.302e-131
Identity = 203/408 (49.75%), Postives = 272/408 (66.67%), Query Frame = 3 
Query:   72 MTSSKST-NNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGV----PESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLPNVP---GLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAINSAXXXXXXXXXXTIGSATDARLSVHYPSQDPNRFGA 1271
            M+ SKS+ + YNR+NWE SDFPI+CETCLG+N ++RM K+ YG+ECKIC+RPFT FRWQPG  AR+K TE+CQ CAK KNVCQTC+ DLEYGLPVQVRD+ L+I  N+P+   NR+F  Q +E+ +    D T P A +        +D L ++ RT+PYY+RN PHICSF+VKGECKRGEECP+RHEKPTDPDDPLS QNI+DR+YG  DPVA K++++  + P L+PP D +ITTLYIG +     + + EK+L D FYQYG++R + V   + CAF++F TRE+AERAAE+S++K  + G+RLT+ WG+ Q +   ++  +++    +P +P   GL P  S        M             F A  S  +    P      S   +  S++YPSQDP R GA
Sbjct:    1 MSMSKSSYSQYNRKNWEDSDFPILCETCLGNNPYMRMMKDKYGRECKICERPFTTFRWQPGKGARYKNTELCQTCAKVKNVCQTCMFDLEYGLPVQVRDHELQIADNIPKQGANRDFFLQNVERTLGQG-DGTQPIAQIANNMDQAAHDRLRRMGRTQPYYKRNAPHICSFFVKGECKRGEECPYRHEKPTDPDDPLSRQNIRDRYYGTNDPVAEKILNRAAAAPTLSPPADTTITTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEKGCAFIEFTTREAAERAAERSFNKTFIKGKRLTIRWGEPQAKRAADNSNYVTPVPSVPILPVPDGLAPSTSSQQRFTGSMPRPPAP-----PTFAAPRSLVVPNVRPVKAGESSGASSSSSIYYPSQDPTRLGA 402
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Celegans
Match: tiar-3 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q93194])

HSP 1 Score: 55.0694 bits (131), Expect = 5.240e-8
Identity = 25/75 (33.33%), Postives = 45/75 (60.00%), Query Frame = 3 
Query:  774 TTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQ 998
            T++Y+G + +   + +LRD F  YG++  V ++  QR AFV++  +E A +A  +   K  MAG ++  +WG+ Q
Sbjct:  327 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKE-MAGNQVRCSWGRTQ 400
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Celegans
Match: tiar-2 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q9U2F5])

HSP 1 Score: 48.9062 bits (115), Expect = 4.819e-6
Identity = 27/74 (36.49%), Postives = 45/74 (60.81%), Query Frame = 3 
Query:  774 TTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            T++Y+G +  ++GE E+R  F ++G +  V  +  Q  AFV+F T+ESA RA  +  +  I  GQ +  +WGK+
Sbjct:  256 TSVYVGNIA-NLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADI-GGQIVRCSWGKS 327
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Celegans
Match: grld-1 (Glutamate Receptor Level Decreased [Source:UniProtKB/TrEMBL;Acc:Q8MXG5])

HSP 1 Score: 48.1358 bits (113), Expect = 9.718e-6
Identity = 28/98 (28.57%), Postives = 53/98 (54.08%), Query Frame = 3 
Query:  735 SMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVY----PRQRCAFVQFATRESAERAAEKSYDKLIMA-GQRLTVNWGKAQLQSEI 1013
            S  +L   +D++  TL++G +P  + E+E+R  F ++G++  V +          AFV F T + A +A  +  D+ I A G R+ + +GK+Q+   +
Sbjct:  156 STWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRL 253
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Celegans
Match: grld-1 (Glutamate Receptor Level Decreased [Source:UniProtKB/TrEMBL;Acc:Q8MXG5])

HSP 1 Score: 48.1358 bits (113), Expect = 9.718e-6
Identity = 28/98 (28.57%), Postives = 53/98 (54.08%), Query Frame = 3 
Query:  735 SMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVY----PRQRCAFVQFATRESAERAAEKSYDKLIMA-GQRLTVNWGKAQLQSEI 1013
            S  +L   +D++  TL++G +P  + E+E+R  F ++G++  V +          AFV F T + A +A  +  D+ I A G R+ + +GK+Q+   +
Sbjct:  156 STWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRL 253
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Fly
Match: CG14641 (gene:FBgn0037220 transcript:FBtr0078985)

HSP 1 Score: 424.861 bits (1091), Expect = 1.522e-146
Identity = 189/310 (60.97%), Postives = 247/310 (79.68%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQ 998
            M+ SK+TN YNRQNWE ++FPI+C+TCLGDN +VRM KE +GKECKIC RPFTIFRW PG++ RFKKTE+CQ CA+ KNVCQTC+LDLEYGLP+QVRD ALK+  N+P+  VN+E+  Q ++  +       A  AG  A G+ +  N+ML KLART PYY+RNRPHICSF+VKGECKRGEECP+RH+KP +PDDPL  QNIKDR+YG  DPVA K+M +  S+P L PPED++ITTLY+G +PE I E ELRD+FYQ+GE+RS+ + PRQ+CAFVQ+  R +AE AAE++++KL++ G+++++ W  +Q
Sbjct:    1 MSMSKTTNTYNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRPFTIFRWCPGARMRFKKTEICQTCARLKNVCQTCLLDLEYGLPIQVRDAALKVADNMPQSDVNKEYYIQNIDAQLQDGDGTEA--AG--AVGRSLAANEMLSKLARTAPYYKRNRPHICSFWVKGECKRGEECPYRHDKPNEPDDPLCEQNIKDRYYGRNDPVAEKIMKRAASLPTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKLVIQGRKVSIKWAHSQ 306
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Fly
Match: CG9346 (gene:FBgn0034572 transcript:FBtr0071526)

HSP 1 Score: 50.0618 bits (118), Expect = 4.363e-6
Identity = 29/86 (33.72%), Postives = 47/86 (54.65%), Query Frame = 3 
Query:  762 DKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTV-YPR--------QRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGK 992
            D + T LY+G +   I E++L + F +YG L S+ + +PR        + C FV + +R+ AERA +    + IM G  + + WGK
Sbjct:  211 DPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSRKDAERALKTLNGRYIM-GYEMRLGWGK 295
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Zebrafish
Match: rbm22 (RNA binding motif protein 22 [Source:NCBI gene;Acc:406495])

HSP 1 Score: 440.654 bits (1132), Expect = 1.773e-152
Identity = 199/310 (64.19%), Postives = 255/310 (82.26%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLD-APGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQ 998
            M +S  +N YNRQNWE SDFPI+C+TCLG+N ++RMTKE +GKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L +   +PR  VN+E+  Q +E+ ++ S D T P   L  AP    ++DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA+KL+ +  +MP+L  P+DKSITTLYIGG+ E++ + ELR+ FYQ+GE+R++T+  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q
Sbjct:    1 MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQNMEREIANS-DGTRPVGLLGKAPS---SSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLMRASTMPRLDVPDDKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNVKWGRSQ 306
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Zebrafish
Match: zgc:165603 (zgc:165603 [Source:ZFIN;Acc:ZDB-GENE-070620-21])

HSP 1 Score: 48.1358 bits (113), Expect = 2.935e-6
Identity = 24/78 (30.77%), Postives = 44/78 (56.41%), Query Frame = 3 
Query:  759 EDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYP------RQRCAFVQFATRESAERAAEKSYDKLIMAGQRL 974
            +D+    L+IG +P ++ EK+L+  F Q+G++  +TV         + CAF+ +  RESA +A    +++  + G RL
Sbjct:   77 KDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGVRL 154
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Zebrafish
Match: zgc:123010 (zgc:123010 [Source:ZFIN;Acc:ZDB-GENE-051120-15])

HSP 1 Score: 50.447 bits (119), Expect = 3.400e-6
Identity = 29/77 (37.66%), Postives = 39/77 (50.65%), Query Frame = 3 
Query:  774 TTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQ 1004
             +L++G V   + EK LRD F  YGE+ S+ V   + CAFV F     A RA EK     I    RL V +   ++Q
Sbjct:  342 NSLWVGNVTTELTEKHLRDLFKIYGEIDSIRVLHERFCAFVNFKNANMASRAMEKLNGHFI-ENTRLVVRYPDRRIQ 417
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Zebrafish
Match: u2surp (U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400])

HSP 1 Score: 48.9062 bits (115), Expect = 5.414e-6
Identity = 31/87 (35.63%), Postives = 45/87 (51.72%), Query Frame = 3 
Query:  762 DKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTV-YPR--------QRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            D + T LY+G +   + E+ L   F +YG L SV + +PR        + C FV F TR  AERA +    K+IM  + + + WGK 
Sbjct:  190 DPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFE-MKLGWGKG 275
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Zebrafish
Match: u2surp (U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400])

HSP 1 Score: 49.6766 bits (117), Expect = 6.499e-6
Identity = 31/87 (35.63%), Postives = 45/87 (51.72%), Query Frame = 3 
Query:  762 DKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTV-YPR--------QRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            D + T LY+G +   + E+ L   F +YG L SV + +PR        + C FV F TR  AERA +    K+IM  + + + WGK 
Sbjct:  204 DPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFE-MKLGWGKG 289
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Xenopus
Match: rbm22 (RNA binding motif protein 22 [Source:NCBI gene;Acc:394713])

HSP 1 Score: 447.588 bits (1150), Expect = 3.376e-155
Identity = 224/417 (53.72%), Postives = 285/417 (68.35%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAIN------------SAXXXXXXXXXXTIGSATDARLSVHYPSQDPNRFGAAVNK 1283
            M +S  +N YNRQNWE +DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD    +   +PR  VN+E+  Q +E+ ++ S D T P   L   GK   ++DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDKSITTLY+GG+ ++I E ELR+ FYQ+GE+R++TV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q     E  +  S    +   P      ++  PP     +     +PP      +N                 P   PP        A   +HYPSQDP R GA   K
Sbjct:    1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGASLKDEMPRSDVNKEYYTQNMEREIANS-DGTRPVGAL---GKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIVNGRRLNVKWGRSQAARGKERERDGSSDPGMKLEPVPGLPGALPPPPTEEESSANYFNLPPNGSAALVNISLPPPPGLSGPPPGYGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGAHAGK 413
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Xenopus
Match: rbm22 (RNA binding motif protein 22 [Source:NCBI gene;Acc:394713])

HSP 1 Score: 423.705 bits (1088), Expect = 5.208e-146
Identity = 218/417 (52.28%), Postives = 275/417 (65.95%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAIN------------SAXXXXXXXXXXTIGSATDARLSVHYPSQDPNRFGAAVNK 1283
            M +S  +N YNRQNWE +DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD    +   +PR  VN+E+  Q +E+ ++ S D T P   L   GK   ++DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDKSITTLY+GG+ ++I E ELR+ FYQ            Q+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q     E  +  S    +   P      ++  PP     +     +PP      +N                 P   PP        A   +HYPSQDP R GA   K
Sbjct:    1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGASLKDEMPRSDVNKEYYTQNMEREIANS-DGTRPVGAL---GKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQ------------QQCAFIQFATRQAAEMAAEKSFNKLIVNGRRLNVKWGRSQAARGKERERDGSSDPGMKLEPVPGLPGALPPPPTEEESSANYFNLPPNGSAALVNISLPPPPGLSGPPPGYGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGAHAGK 401
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Xenopus
Match: rbm22 (RNA binding motif protein 22 [Source:NCBI gene;Acc:394713])

HSP 1 Score: 404.831 bits (1039), Expect = 1.304e-138
Identity = 212/417 (50.84%), Postives = 268/417 (64.27%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAIN------------SAXXXXXXXXXXTIGSATDARLSVHYPSQDPNRFGAAVNK 1283
            M +S  +N YNRQNWE +                  TKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD    +   +PR  VN+E+  Q +E+ ++ S D T P   L   GK   ++DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDKSITTLY+GG+ ++I E ELR+ FYQ+GE+R++TV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q     E  +  S    +   P      ++  PP     +     +PP      +N                 P   PP        A   +HYPSQDP R GA   K
Sbjct:    1 MATSLGSNTYNRQNWEDA------------------TKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGASLKDEMPRSDVNKEYYTQNMEREIANS-DGTRPVGAL---GKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIVNGRRLNVKWGRSQAARGKERERDGSSDPGMKLEPVPGLPGALPPPPTEEESSANYFNLPPNGSAALVNISLPPPPGLSGPPPGYGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGAHAGK 395
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Xenopus
Match: rbm22 (RNA binding motif protein 22 [Source:NCBI gene;Acc:394713])

HSP 1 Score: 374.015 bits (959), Expect = 9.256e-127
Identity = 193/372 (51.88%), Postives = 247/372 (66.40%), Query Frame = 3 
Query:  207 KICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAIN------------SAXXXXXXXXXXTIGSATDARLSVHYPSQDPNRFGAAVNK 1283
            +IC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD    +   +PR  VN+E+  Q +E+ ++ S D T P   L   GK   ++DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDKSITTLY+GG+ ++I E ELR+ FYQ+GE+R++TV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q     E  +  S    +   P      ++  PP     +     +PP      +N                 P   PP        A   +HYPSQDP R GA   K
Sbjct:    8 QICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGASLKDEMPRSDVNKEYYTQNMEREIANS-DGTRPVGAL---GKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIVNGRRLNVKWGRSQAARGKERERDGSSDPGMKLEPVPGLPGALPPPPTEEESSANYFNLPPNGSAALVNISLPPPPGLSGPPPGYGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGAHAGK 375
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Mouse
Match: Rbm22 (RNA binding motif protein 22 [Source:MGI Symbol;Acc:MGI:1914060])

HSP 1 Score: 446.817 bits (1148), Expect = 6.014e-155
Identity = 226/423 (53.43%), Postives = 286/423 (67.61%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEH---GKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAINSAXXXXXXXXXXTIGSATDARLS--------------VHYPSQDPNRFGAAVNKH 1286
            M +S  +N YNRQNWE +DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L    ++P+  VN+E+  Q +E+ +S S D T P   L   GK    +DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDK+ITTLY+GG+ ++I E +LR+ FYQ+GE+R++TV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q     E    G   SG  + P       +            N+    +PP      +N A   PP   PP                         +HYPSQDP R GA   KH
Sbjct:    1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNS-DGTRPVGML---GKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFN--LPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKH 417
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Mouse
Match: Tial1 (Tia1 cytotoxic granule-associated RNA binding protein-like 1 [Source:MGI Symbol;Acc:MGI:107913])

HSP 1 Score: 48.1358 bits (113), Expect = 9.827e-7
Identity = 22/72 (30.56%), Postives = 40/72 (55.56%), Query Frame = 3 
Query:  777 TLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGK 992
            T+Y GG+   + ++ +R  F  +G++  + V+P +  +FV+F+T ESA  A   S +   + G  +   WGK
Sbjct:   20 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI-VSVNGTTIEGHVVKCYWGK 90
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Mouse
Match: U2surp (U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208])

HSP 1 Score: 51.9878 bits (123), Expect = 1.004e-6
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 3 
Query:  762 DKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTV-YPR--------QRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            D S T LY+G +   + E+ L   F ++G L SV + +PR        + C FV F  R  AERA +    K+IM+ + + + WGKA
Sbjct:  270 DPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE-MKLGWGKA 355
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914])

HSP 1 Score: 47.7506 bits (112), Expect = 1.517e-6
Identity = 24/75 (32.00%), Postives = 41/75 (54.67%), Query Frame = 3 
Query:  777 TLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQL 1001
            T+Y GGV   + E+ +R  F  +G++  + V+P +  +FV+F++ ESA  A   S +   + G  +   WGK  L
Sbjct:   12 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAI-VSVNGTTIEGHVVKCYWGKETL 85
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Mouse
Match: U2surp (U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208])

HSP 1 Score: 50.8322 bits (120), Expect = 3.267e-6
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 3 
Query:  762 DKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTV-YPR--------QRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            D S T LY+G +   + E+ L   F ++G L SV + +PR        + C FV F  R  AERA +    K+IM+ + + + WGKA
Sbjct:  269 DPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE-MKLGWGKA 354
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BLAST of Pre-mRNA-splicing factor RBM22 vs. UniProt/SwissProt
Match: sp|Q7ZXB5|RBM22_XENLA (Pre-mRNA-splicing factor RBM22 OS=Xenopus laevis OX=8355 GN=rbm22 PE=2 SV=1)

HSP 1 Score: 452.21 bits (1162), Expect = 2.574e-156
Identity = 227/417 (54.44%), Postives = 286/417 (68.59%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAIN------------SAXXXXXXXXXXTIGSATDARLSVHYPSQDPNRFGAAVNK 1283
            M +S  +N YNRQNWE +DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  + +   +PR  VN+E+  Q +E+ ++ S D T P   L   GK   ++DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDRFYG+ DPVA KL+ +  +MP+L PPEDKSITTLY+GG+ ++I E ELR+ FYQ+GE+R++TV  RQ+CAF+QFATR+SAE AAEKS++KLI+ G+RL V WG++Q     E     SG   +   P      ++  PP     +     +PP      +N                 P   PP        A   +HYPSQDP R GA   K
Sbjct:    1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDTGVSLKDEMPRSDVNKEYYTQNMEREIANS-DGTRPVGAL---GKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRFYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAETAAEKSFNKLIVNGRRLNVKWGRSQAARGKEREHDGSGDPGMKFEPVPGLPGALPPPPTEEESSANYFNLPPNGSAALVNISLPPPPGLSGPPPGFGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGAHAGK 413
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BLAST of Pre-mRNA-splicing factor RBM22 vs. UniProt/SwissProt
Match: sp|Q6P616|RBM22_XENTR (Pre-mRNA-splicing factor RBM22 OS=Xenopus tropicalis OX=8364 GN=rbm22 PE=2 SV=1)

HSP 1 Score: 447.588 bits (1150), Expect = 1.789e-154
Identity = 224/417 (53.72%), Postives = 285/417 (68.35%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAIN------------SAXXXXXXXXXXTIGSATDARLSVHYPSQDPNRFGAAVNK 1283
            M +S  +N YNRQNWE +DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD    +   +PR  VN+E+  Q +E+ ++ S D T P   L   GK   ++DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDKSITTLY+GG+ ++I E ELR+ FYQ+GE+R++TV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q     E  +  S    +   P      ++  PP     +     +PP      +N                 P   PP        A   +HYPSQDP R GA   K
Sbjct:    1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGASLKDEMPRSDVNKEYYTQNMEREIANS-DGTRPVGAL---GKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIVNGRRLNVKWGRSQAARGKERERDGSSDPGMKLEPVPGLPGALPPPPTEEESSANYFNLPPNGSAALVNISLPPPPGLSGPPPGYGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGAHAGK 413
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. UniProt/SwissProt
Match: sp|Q4V7D7|RBM22_RAT (Pre-mRNA-splicing factor RBM22 OS=Rattus norvegicus OX=10116 GN=Rbm22 PE=2 SV=1)

HSP 1 Score: 447.203 bits (1149), Expect = 2.872e-154
Identity = 228/423 (53.90%), Postives = 287/423 (67.85%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEH---GKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAINSAXXXXXXXXXXTIGSATD--------------ARLSVHYPSQDPNRFGAAVNKH 1286
            M +S  +N YNRQNWE +DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L    ++P+  VN+E+  Q +E+ +S S D T P   L   GK    +DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDK+ITTLY+GG+ ++I E +LR+ FYQ+GE+R+VTV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q     E    G   SG  + P       +            N+    +PP      +N A   PP   PP                     A   +HYPSQDP R GA   KH
Sbjct:    1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNS-DGTRPVGML---GKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFN--LPPSGPPAVVNIALPPPPGIAPPPPPGFGPHLFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKH 417
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. UniProt/SwissProt
Match: sp|Q8BHS3|RBM22_MOUSE (Pre-mRNA-splicing factor RBM22 OS=Mus musculus OX=10090 GN=Rbm22 PE=1 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 4.207e-154
Identity = 226/423 (53.43%), Postives = 286/423 (67.61%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEH---GKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAINSAXXXXXXXXXXTIGSATDARLS--------------VHYPSQDPNRFGAAVNKH 1286
            M +S  +N YNRQNWE +DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L    ++P+  VN+E+  Q +E+ +S S D T P   L   GK    +DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDK+ITTLY+GG+ ++I E +LR+ FYQ+GE+R++TV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q     E    G   SG  + P       +            N+    +PP      +N A   PP   PP                         +HYPSQDP R GA   KH
Sbjct:    1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNS-DGTRPVGML---GKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFN--LPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKH 417
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. UniProt/SwissProt
Match: sp|Q4R4J1|RBM22_MACFA (Pre-mRNA-splicing factor RBM22 OS=Macaca fascicularis OX=9541 GN=RBM22 PE=2 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 4.207e-154
Identity = 226/423 (53.43%), Postives = 286/423 (67.61%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEH---GKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAINSAXXXXXXXXXXTIGSATDARLS--------------VHYPSQDPNRFGAAVNKH 1286
            M +S  +N YNRQNWE +DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L    ++P+  VN+E+  Q +E+ +S S D T P   L   GK    +DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDK+ITTLY+GG+ ++I E +LR+ FYQ+GE+R++TV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RL V WG++Q     E    G   SG  + P       +            N+    +PP      +N A   PP   PP                         +HYPSQDP R GA   KH
Sbjct:    1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQNMEREISNS-DGTRPVGML---GKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFN--LPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKH 417
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. TrEMBL
Match: A0A0R3UMU7 (Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS9086 PE=4 SV=2)

HSP 1 Score: 492.656 bits (1267), Expect = 1.997e-168
Identity = 221/318 (69.50%), Postives = 265/318 (83.33%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK----------IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            M SSK++N YNRQNWE S FPI+CETCLG + FVRM KE YGKECKIC RPFT+FRW PG KARFKKTE+CQ CAK KNVCQTCI DLEYGLPV+VRD AL++NQ LPR  VNRE+  QQ+EQ +  S DVTAP+ G +  GK            ++D+LLKLART PYYRRNRPHICSF+VKGEC+RGEECP+RHEKPTDPDDPLS+QN++DR+YG  DPVA KL+ KY+SMP+LTPPED++ITTLYIGGVPE + EK+LRD FYQ+GELRSV+++ +Q CAF+QF TRE+AE+AAE+SYD+LI+ G RLT+NWGK+
Sbjct:    1 MASSKTSNTYNRQNWEDSTFPILCETCLGPSPFVRMMKERYGKECKICSRPFTVFRWSPGPKARFKKTEICQTCAKVKNVCQTCIFDLEYGLPVEVRDKALRLNQQLPRSDVNREYFHQQIEQQLEASGDVTAPYGGHELIGKAIAGSNTAAGTTSSDLLLKLARTTPYYRRNRPHICSFWVKGECRRGEECPYRHEKPTDPDDPLSDQNLRDRYYGNDDPVAAKLLSKYRSMPKLTPPEDRTITTLYIGGVPEELTEKDLRDHFYQFGELRSVSIHYKQHCAFLQFTTREAAEKAAERSYDRLILKGHRLTLNWGKS 318
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. TrEMBL
Match: A0A0X3P3Q4 (Pre-mRNA-splicing factor RBM22 (Fragment) OS=Schistocephalus solidus OX=70667 GN=RBM22 PE=4 SV=1)

HSP 1 Score: 491.886 bits (1265), Expect = 1.400e-167
Identity = 223/321 (69.47%), Postives = 262/321 (81.62%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-------------IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            MTSSK++N YNRQNWE S FPI+CETCLG + FVRM KE YGKECKIC RPFT+FRW PG KARFKKTE+CQ CAK KNVCQTCI DLEYGLPV+VRD AL++NQ LPR  VNRE+  QQ+EQ +  + D+TAP+ G +  GK                 DMLLKLART PYYRRNRPHICSF+VKGEC+RGEECP+RHEKPTDPDDPLS QN++DR+YG  DPVA KL+ KY SMP+LTPPED++ITTLYIGG+P+ + EK+LRD FYQ+GELRSV+V+ +Q CAF+QF TRESAERAAE+SYD+LI+ G RLTVNWGK+
Sbjct:   18 MTSSKASNTYNRQNWEDSSFPILCETCLGPSPFVRMMKERYGKECKICNRPFTVFRWSPGPKARFKKTEICQTCAKVKNVCQTCIFDLEYGLPVEVRDKALRLNQQLPRSDVNREYFHQQVEQQLELAGDITAPYGGHELIGKSLASSNTVLHGSGAGGADMLLKLARTTPYYRRNRPHICSFWVKGECRRGEECPYRHEKPTDPDDPLSEQNLRDRYYGQDDPVAAKLLSKYSSMPKLTPPEDRTITTLYIGGIPDELTEKDLRDHFYQFGELRSVSVHHKQHCAFLQFTTRESAERAAERSYDRLILRGHRLTVNWGKS 338
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. TrEMBL
Match: A0A3S5BS63 (Uncharacterized protein OS=Protopolystoma xenopodis OX=117903 GN=PXEA_LOCUS9284 PE=4 SV=1)

HSP 1 Score: 484.567 bits (1246), Expect = 2.148e-164
Identity = 217/321 (67.60%), Postives = 261/321 (81.31%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGKIKNN-------------DMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            M SSK +N YNRQNWE S FPI+CETCLG + +VRM KE YGKECKICQRPFTIFRW PG KARFKKTE+CQ CAK KNVCQTCI DLEYGLPV+VRD AL++ Q+LPR  VNRE+  QQ+EQ +  + DVTAP+ G +  GK+ +              DMLLKLART PYYRRNRPHICSF+VKGEC+RGEECP+RHEKPTDPDDPLS+QN+KDR+YG  DPVA KL+ KY SMP+LTPP+D++ITTLYIG +P+ + EKELRD FYQ+GE+RS+ ++ +Q CAFVQF  R++AERAAEK+YD+LI+ G RL+VNWGK+
Sbjct:    1 MASSKGSNTYNRQNWEDSSFPILCETCLGPSPYVRMMKEKYGKECKICQRPFTIFRWCPGPKARFKKTEICQTCAKVKNVCQTCIFDLEYGLPVEVRDKALRVAQHLPRSEVNREYFHQQVEQQLELAGDVTAPYGGHELVGKMLSGTVASTSFTGSGGADMLLKLARTTPYYRRNRPHICSFWVKGECRRGEECPYRHEKPTDPDDPLSDQNLKDRYYGQNDPVASKLLSKYHSMPKLTPPDDRTITTLYIGNIPDIVSEKELRDHFYQFGEIRSIHMHAKQHCAFVQFTLRDAAERAAEKTYDRLILGGHRLSVNWGKS 321
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. TrEMBL
Match: A0A0R3SAW9 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS1545 PE=4 SV=1)

HSP 1 Score: 479.945 bits (1234), Expect = 6.287e-163
Identity = 216/318 (67.92%), Postives = 260/318 (81.76%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGKI----------KNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            M+SSKS N YNRQNWE SDFPI+C+TCLG + F+RM KE YGKECKIC RPFT+FRW PG KARFKKTE+CQ CAK KNVCQTCI DLEYGLPV+VRD AL+I+Q LPR  VNRE+  QQ+EQ +  S D+TAP+ G +  GK              D+LLKLART PYYRRNR HICSF+VKGEC+RGEECP+RHEKPTDPDDPLS+QN++DR+YG  DPVA KL+ K ++MP LTPPED++ITTLYIGG+ E I E++LRD FYQ+GELRSV+V+ +Q CAF+QF TRE+AE+AA++SYD+LI+ G RLTVNWGK+
Sbjct:    1 MSSSKSANTYNRQNWEDSDFPILCQTCLGPSPFLRMMKERYGKECKICSRPFTVFRWCPGPKARFKKTEICQTCAKVKNVCQTCIFDLEYGLPVEVRDKALRISQQLPRSEVNREYFHQQVEQQLEASGDITAPYGGHELIGKAVAGSNAATGSSGADLLLKLARTAPYYRRNRAHICSFWVKGECRRGEECPYRHEKPTDPDDPLSDQNLRDRYYGNDDPVAAKLLSKSRAMPTLTPPEDRTITTLYIGGISEDITEQDLRDHFYQFGELRSVSVHYKQHCAFLQFTTREAAEKAADRSYDRLILKGHRLTVNWGKS 318
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. TrEMBL
Match: A0A1S8WI40 (Uncharacterized protein (Fragment) OS=Opisthorchis viverrini OX=6198 GN=X801_10096 PE=4 SV=1)

HSP 1 Score: 474.937 bits (1221), Expect = 1.311e-162
Identity = 212/321 (66.04%), Postives = 257/321 (80.06%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGKI-------------KNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            M +SK  N YNRQNWE S FPI+CETCLG + FVRM +E YGKECKIC RPFT+FRW PG KARFKKTEVCQ CAK KNVCQTCI DLEYGLPV+VRD AL+++Q +P+  VNRE+  QQ+EQ + T  DVTAP+ G    GK                 D+LLKLART PYYRRNRPHICSF+VKGEC+RGEECP+RHEKPTDPDDPLS+QN+KDR+YG  DPVA KL+ KY +MP+L PPED++ITTLYIG +P+ + E++LR+ FYQ+GE+RSV ++PRQ CAF+QF TR+SAE+AAE+SY++LI+ G RLTVNWGK+
Sbjct:    1 MATSKGANTYNRQNWEDSSFPILCETCLGPSPFVRMMRERYGKECKICDRPFTVFRWCPGPKARFKKTEVCQSCAKVKNVCQTCIFDLEYGLPVEVRDKALRMSQQIPKNDVNREYFHQQIEQHLETDGDVTAPYGGHQLIGKALSNTTAASSSSGGGGTDLLLKLARTAPYYRRNRPHICSFWVKGECRRGEECPYRHEKPTDPDDPLSDQNLKDRYYGHEDPVAAKLLSKYDAMPKLVPPEDRTITTLYIGSIPDEVTERDLRNHFYQFGEIRSVNLHPRQHCAFIQFTTRQSAEKAAERSYERLILGGHRLTVNWGKS 321
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Cavefish
Match: ENSAMXT00000019080.2 (pre-mRNA-splicing factor RBM22-like [Source:NCBI gene;Acc:103042719])

HSP 1 Score: 453.751 bits (1166), Expect = 3.122e-158
Identity = 227/409 (55.50%), Postives = 288/409 (70.42%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLD-APGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQL--QSEIEHGKHISGKSMLPNVPGLXXXXXXXXXXXXIMLNWTPSLMPPGAHFNAINSAXXXXXXXXXXTIGSATDARLSVHYPSQDPNRFGA-AVNKH 1286
            M +S  +N YNRQNWE SDFPI+C+TCLG+N ++RM+KE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L I  ++P+  VN+E+  Q +E+ +  S D T P   L  AP    ++DMLLKLART PYY+RNRPHICSF+VKGEC+RGEECP+RHEKPTDPDDPL++QNIKDRFYG+ DPVA+KL+ +  +MP+L PPEDK+I+TLYIGG+ E+I + ELR  FYQ+GE+R++T+  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RLTV WG++Q     EI+ G    G  + P VPGL             +L +     PP  H       P             A      +HYPSQDP R G  A  +H
Sbjct:    1 MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMSKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSIKDDVPKSDVNKEYYTQNMEREIQNS-DGTRPVGMLGKAP---SSSDMLLKLARTSPYYKRNRPHICSFWVKGECRRGEECPYRHEKPTDPDDPLADQNIKDRFYGINDPVANKLLQRASTMPRLDPPEDKTISTLYIGGLGENITDSELRSHFYQFGEIRTITLVQRQQCAFIQFATRQAAELAAEKSFNKLIVNGRRLTVKWGRSQAAKSKEIKEGYSEMGTRLEP-VPGL----PAGVCLSVCLLGY--GFGPPVFHPMGPPPPPP-----------MALRPPGHIHYPSQDPQRMGTHAATRH 387
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Cavefish
Match: ENSAMXT00000042091.1 (pre-mRNA-splicing factor RBM22-like [Source:NCBI gene;Acc:103042719])

HSP 1 Score: 449.129 bits (1154), Expect = 5.472e-156
Identity = 209/334 (62.57%), Postives = 266/334 (79.64%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGL-DAPGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQL--QSEIEHGKHISGKSMLPNVPG 1064
            M +S  +N YNRQNWE SDFPI+C+TCLG+N ++RM+KE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L I  ++P+  VN+E+  Q +E+ +  S D T P   L  AP    ++DMLLKLART PYY+RNRPHICSF+VKGEC+RGEECP+RHEKPTDPDDPL++QNIKDRFYG+ DPVA+KL+ +  +MP+L PPEDK+I+TLYIGG+ E+I + ELR  FYQ+GE+R++T+  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RLTV WG++Q     EI+ G    G  + P VPG
Sbjct:    1 MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMSKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSIKDDVPKSDVNKEYYTQNMEREIQNS-DGTRPVGMLGKAPS---SSDMLLKLARTSPYYKRNRPHICSFWVKGECRRGEECPYRHEKPTDPDDPLADQNIKDRFYGINDPVANKLLQRASTMPRLDPPEDKTISTLYIGGLGENITDSELRSHFYQFGEIRTITLVQRQQCAFIQFATRQAAELAAEKSFNKLIVNGRRLTVKWGRSQAAKSKEIKEGYSEMGTRLEP-VPG 329
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Cavefish
Match: rbm22 (RNA binding motif protein 22 [Source:NCBI gene;Acc:406495])

HSP 1 Score: 443.736 bits (1140), Expect = 5.790e-153
Identity = 200/310 (64.52%), Postives = 254/310 (81.94%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLD-APGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQ 998
            M +S   N YNRQNWE SDFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L +  ++P+  VN+E+  Q +E+ ++ S D T P   L  AP    ++DMLLKLART PYY+RNRPHICSF+VKGEC+RGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L  P+DKSITTLYIGG+ ++I + ELR+ FYQ+GE+R++TV  RQ+CAF+QFATR+SAE AAEKS++KLI+ G+RL V WG++Q
Sbjct:   57 MATSLGANTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDDVPKSDVNKEYYTQNMEREIANS-DGTRPVGALGKAP---SSSDMLLKLARTTPYYKRNRPHICSFWVKGECRRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDTPDDKSITTLYIGGLGDTITDSELRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAEMAAEKSFNKLIIHGRRLNVKWGRSQ 362
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Cavefish
Match: rbm22 (RNA binding motif protein 22 [Source:NCBI gene;Acc:406495])

HSP 1 Score: 371.318 bits (952), Expect = 9.205e-126
Identity = 177/310 (57.10%), Postives = 226/310 (72.90%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLD-APGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQ 998
            M +S   N YNRQNWE S                            IC RPFT+FRW PG + RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L +  ++P+  VN+E+  Q +E+ ++ S D T P   L  AP    ++DMLLKLART PYY+RNRPHICSF+VKGEC+RGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L  P+DKSITTLYIGG+ ++I + E  + FYQ+GE+R++TV  RQ+CAF+QFATR+SAE AAEKS++KLI+ G+RL V WG++Q
Sbjct:    1 MATSLGANTYNRQNWEDS----------------------------ICARPFTVFRWCPGVRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDDVPKSDVNKEYYTQNMEREIANS-DGTRPVGALGKAP---SSSDMLLKLARTTPYYKRNRPHICSFWVKGECRRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDTPDDKSITTLYIGGLGDTITDSE--NHFYQFGEIRTITVVQRQQCAFIQFATRQSAEMAAEKSFNKLIIHGRRLNVKWGRSQ 276
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Cavefish
Match: u2surp (U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400])

HSP 1 Score: 51.2174 bits (121), Expect = 1.872e-6
Identity = 32/87 (36.78%), Postives = 45/87 (51.72%), Query Frame = 3 
Query:  762 DKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTV-YPR--------QRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKA 995
            D S T LY+G +   + E+ L   F +YG L SV + +PR        + C FV F TR  AERA +    K+IM  + + + WGK 
Sbjct:  204 DPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFE-MKLGWGKG 289
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Sea Lamprey
Match: rbm22 (RNA binding motif protein 22 [Source:NCBI gene;Acc:406495])

HSP 1 Score: 296.59 bits (758), Expect = 5.208e-98
Identity = 143/236 (60.59%), Postives = 185/236 (78.39%), Query Frame = 3 
Query:  342 GLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGKIKN-NDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQ----LQSEIEHGKHIS 1034
            GLPVQVRD+AL +   +P+  VN+E+  Q +E+ +  S D T P   L   GK +  +DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  SMP+L  P D++ITTLY+GG+ +SIGE +LR+ FYQ+GELRSVTV PRQ+CAFVQF TR SAE+AA+KS++KLI+ G+RL + WG++Q     + EI  GK ++
Sbjct:    1 GLPVQVRDSALALKDEMPKSDVNKEYYTQNMEREIQNS-DGTTPVGSL---GKAQAPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLRRASSMPRLDLPSDRTITTLYVGGLDDSIGETQLRNHFYQFGELRSVTVVPRQQCAFVQFTTRHSAEQAADKSFNKLIINGRRLNIKWGRSQGAPRPREEIRAGKAMT 232
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Sea Lamprey
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167])

HSP 1 Score: 46.595 bits (109), Expect = 4.042e-6
Identity = 23/72 (31.94%), Postives = 41/72 (56.94%), Query Frame = 3 
Query:  777 TLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGK 992
            T+Y GG+ + + E+ +R  F  +G++  + V+P +  +F++FAT ESA  A   S +   + G  +   WGK
Sbjct:  112 TVYCGGITQGLTEQLMRQTFLLFGQILEIRVFPDKGYSFIRFATHESAAHAI-VSVNGSTIEGFSVKCFWGK 182
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Sea Lamprey
Match: zgc:123010 (zgc:123010 [Source:ZFIN;Acc:ZDB-GENE-051120-15])

HSP 1 Score: 46.595 bits (109), Expect = 5.342e-6
Identity = 21/51 (41.18%), Postives = 32/51 (62.75%), Query Frame = 3 
Query:  777 TLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERA 929
            +L+IG V  ++ EK + D F +YG +RSV V   + CAFV +   E+A +A
Sbjct:  148 SLWIGNVTSNVTEKAIMDLFKRYGTIRSVRVMHERYCAFVNYTNGEAAAKA 198
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Yeast
Match: ECM2 (Pre-mRNA splicing factor; facilitates the cooperative formation of U2/U6 helix II in association with stem II in the spliceosome, function may be regulated by Slu7p [Source:SGD;Acc:S000000269])

HSP 1 Score: 87.8113 bits (216), Expect = 1.660e-19
Identity = 36/84 (42.86%), Postives = 56/84 (66.67%), Query Frame = 3 
Query:  132 PIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKA-RFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKI 380
            P +CE CLGD + +RMTK P G ECKIC  PFT++ ++   ++    KT +C  CA  +N+CQ C+LD  + +P+Q+RD+ + +
Sbjct:   10 PNICEQCLGDEANIRMTKIPQGSECKICTLPFTLYHFKTSKRSNNIIKTLICVRCATQRNICQCCMLDSRWHIPIQLRDHLISL 93
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Yeast
Match: NAM8 (RNA binding protein, component of the U1 snRNP protein; mutants are defective in meiotic recombination and in formation of viable spores, involved in the formation of DSBs through meiosis-specific splicing of REC107 pre-mRNA; Nam8p regulon embraces the meiotic pre-mRNAs of REC107, HFM1, AMA1 SPO22 and PCH2; the putative RNA binding domains RRM2 and RRM3 are required for Nam8p meiotic function [Source:SGD;Acc:S000001128])

HSP 1 Score: 53.1434 bits (126), Expect = 5.161e-8
Identity = 30/91 (32.97%), Postives = 48/91 (52.75%), Query Frame = 3 
Query:  741 PQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEI 1013
            P L    D + TT++IGG+   + E ELR  F  +G +  V +   + C FVQ+  R SAE AA        +A  R+ ++WG++  Q+ +
Sbjct:  302 PSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAE-AAIAGMQGFPIANSRVRLSWGRSAKQTAL 391
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Yeast
Match: NGR1 (RNA binding protein that negatively regulates growth rate; interacts with the 3' UTR of the mitochondrial porin (POR1) mRNA and enhances its degradation; overexpression impairs mitochondrial function; interacts with Dhh1p to mediate POR1 mRNA decay; expressed in stationary phase [Source:SGD;Acc:S000000416])

HSP 1 Score: 48.9062 bits (115), Expect = 1.127e-6
Identity = 26/86 (30.23%), Postives = 46/86 (53.49%), Query Frame = 3 
Query:  735 SMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGK 992
            S+P  T   D + TT+++GG+     E +LR  F  +G + +V +   + C FV+F  R  AE A+ +     I+ G  + ++WG+
Sbjct:  347 SLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAE-ASIQGLQGFIVGGSPIRLSWGR 431
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Nematostella
Match: EDO31981 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SWC6])

HSP 1 Score: 418.313 bits (1074), Expect = 2.063e-144
Identity = 194/332 (58.43%), Postives = 258/332 (77.71%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLPNVPGL 1067
            M +SKS N YNRQNWE ++FPI+C+TCLGDN ++RMT+E +G+ECKIC RPFTIFRW PG++ RFKKTE+CQ C+K KN+CQTC+LDLEYGLPVQVRD +L +   +P+  VN+E+  Q +E+ ++ S D T+P   L       + D+L+KLART PYY+RNRPHICSF+VKGECKRGEECP+RH+ PTDP+DPL++QNIKDR+YG+ DPVA+KL+ + +SMP L  P D+SITTLY+GG+   + E++LRD FYQ+GELRS+++ PRQ CAFV F +R +AE AA++S++KLI+ G+RL + WGK+Q Q   +      G   L  VPGL
Sbjct:    1 MATSKSANTYNRQNWEDAEFPILCQTCLGDNPYIRMTRETHGRECKICARPFTIFRWCPGARMRFKKTEICQTCSKLKNICQTCLLDLEYGLPVQVRDKSLGLKDEMPKSDVNKEYYTQNVERELADS-DGTSPGGALQGKANAPS-DLLMKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHDMPTDPNDPLADQNIKDRYYGVNDPVANKLLKQAQSMPMLDTPTDRSITTLYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNCAFVCFTSRAAAEAAADRSFNKLILKGRRLKIMWGKSQGQ---QPAPGRQGGHTLTPVPGL 327
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Nematostella
Match: EDO36726 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SHW9])

HSP 1 Score: 64.3142 bits (155), Expect = 2.375e-11
Identity = 46/141 (32.62%), Postives = 69/141 (48.94%), Query Frame = 3 
Query:  558 NRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLA-DPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVP-ESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRL 974
            N+ + C ++ KG C  G EC F H  PT+ D          RF GLA D         +K         DK   TLY+GG+   +  E+ L + F ++GE+  + + P++  AFV++ +R +AE A      K+ MA QRL
Sbjct:  174 NKHYYCIYFAKGCCHLGAECGFIHSIPTEKD--------VGRF-GLAQDCFGRDRHQNHKENLGGVGAFDKESCTLYVGGLTLHTKLEEWLWEEFGEWGEIEDIRIIPKKNIAFVRYKSRLNAEFA------KVAMADQRL 299
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Nematostella
Match: EDO32730 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SU80])

HSP 1 Score: 50.8322 bits (120), Expect = 2.569e-7
Identity = 41/171 (23.98%), Postives = 75/171 (43.86%), Query Frame = 3 
Query:  555 RNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKEL-RDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLPNVPG 1064
            R+   IC  + +G C  G EC + HE P D    +  + ++D F+       H  +   +S       +D++  T+Y+GG+  S   K +    F ++GE+ ++ +   +  AFV++  R SAE A E    + +   + L + W        +E  K  + + M     G
Sbjct:   46 RDDAGICLNFARGCCPLGFECSWIHEIP-DAKFNVKQETMRDCFF----RERHSEVRDDQSGVGSFNTDDETSRTVYVGGIACSKDMKSIVYKHFSEWGEIENMRLLEHKGVAFVRYKLRGSAEFAMEAMQRQSLDDNEVLNIRWATKDPNPWVEKRKRKADERMYLEAAG 211
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Medaka
Match: rbm22 (RNA binding motif protein 22 [Source:NCBI gene;Acc:101159025])

HSP 1 Score: 446.432 bits (1147), Expect = 8.535e-155
Identity = 201/310 (64.84%), Postives = 256/310 (82.58%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGK-IKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQ 998
            M +S  +N YNRQNWE +DFPI+C+TCLG+N ++RMTKE YGKECKIC RPFT+FRW PG++ RFKKTEVCQ C+K KNVCQTC+LDLEYGLP+QVRD  L +   +PR  VN+E+  Q +E+ M+ S D T P   L   GK   ++DMLLKLART PYY+RNRPHICSF+VKGECKRGEECP+RHEKPTDPDDPL++QNIKDR+YG+ DPVA KL+ +  +MP+L PPEDKSITTLYIGG+ +++ + +L+  FYQ+GE+R++TV  RQ+CAF+QFATR++AE AAEKS++KLI+ G+RLTV WG++Q
Sbjct:    1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICSRPFTVFRWCPGTRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLTVKDEIPRSDVNKEYYTQNMEREMANS-DGTRPVGQL---GKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYIGGLGDNVTDGDLKGHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLILNGRRLTVKWGRSQ 306
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Planmine SMEST
Match: SMESG000027513.1 (SMESG000027513.1)

HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0
Identity = 326/327 (99.69%), Postives = 327/327 (100.00%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLP 1052
            MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNRE+NQQQLEQLMSTSKDVTAPFAGLDAPGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLP
Sbjct:    1 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREYNQQQLEQLMSTSKDVTAPFAGLDAPGKIKNNDMLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQLQSEIEHGKHISGKSMLP 327
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Planmine SMEST
Match: SMESG000059000.1 (SMESG000059000.1)

HSP 1 Score: 366.696 bits (940), Expect = 1.521e-124
Identity = 168/309 (54.37%), Postives = 233/309 (75.40%), Query Frame = 3 
Query:   72 MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQRPFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNALKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGKIKNND--MLLKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQNIKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGK 992
            MT+SK  + YN+ NWE+SDFPIVCE C G+N F+RMTKE +GKEC +C RPFT+FRWQ   + +F+ TE+CQVC +TK+VCQ+CI+DLE+GLPVQVRD  L I+Q+LP   VN E+NQQ +E+ +  + D+++P+    APGK+ NN   ML K+A++EP Y RN+P+IC+FY+KGECKRGEECP+RHEKP +  DP++ Q+IKDR+YG+ D +A K+++KY+S+P+L  PEDK ITT+ + G+PE   EK++++ FYQ+GE+RS   Y   R + VQFA RESAE+AA   YD     G  +++ W K
Sbjct:    1 MTTSKGASQYNKLNWEESDFPIVCEACFGENPFLRMTKERFGKECGVCLRPFTVFRWQCDKEGKFRSTEICQVCTRTKHVCQSCIMDLEHGLPVQVRDKFLNIDQDLPTAPVNLEYNQQMIEREIELNGDISSPYKDFSAPGKMTNNTIRMLSKIAQSEP-YSRNKPNICTFYMKGECKRGEECPYRHEKPIEIYDPVNEQHIKDRYYGIDDNIAQKIIEKYESLPKLVHPEDKHITTIDVFGLPEQYQEKDVKNYFYQFGEVRSARQYEGNRWS-VQFALRESAEKAARLIYD-WSQLGHAVSMKWSK 306
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Planmine SMEST
Match: SMESG000044648.1 (SMESG000044648.1)

HSP 1 Score: 54.299 bits (129), Expect = 7.455e-8
Identity = 26/73 (35.62%), Postives = 41/73 (56.16%), Query Frame = 3 
Query:  774 TTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGK 992
            T +YI G+PE I E+ +R  F ++G + +V +Y  +  AF+ F T E+A RA  + +   I     +  NWGK
Sbjct:  210 TNVYIAGIPEGITEELIRVHFEEFGRIDAVKIYQEKAHAFINFVTHEAAARAISQRHGYKINES-VIKCNWGK 281
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Planmine SMEST
Match: SMESG000055085.1 (SMESG000055085.1)

HSP 1 Score: 52.373 bits (124), Expect = 3.529e-7
Identity = 24/76 (31.58%), Postives = 43/76 (56.58%), Query Frame = 3 
Query:  774 TTLYIGGVPESIGEKELRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVNWGKAQL 1001
            T +Y+ G+ E++ E+ +R  F ++G + SV V+P +  AF+ ++T E+A RA  + +   I     +  NWGK   
Sbjct:  208 TNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKI-NNNVVKCNWGKENF 282
[Close]
BLAST of Pre-mRNA-splicing factor RBM22 vs. Planmine SMEST
Match: SMESG000061507.1 (SMESG000061507.1)

HSP 1 Score: 50.8322 bits (120), Expect = 1.100e-6
Identity = 26/92 (28.26%), Postives = 50/92 (54.35%), Query Frame = 3 
Query:  780 LYIGGVPESIGEKELRDRFYQYGELRSVTVYP------RQRCAFVQFATRESAERAAEKSYDKLIMAGQRLTVN--------WGKAQLQSEI 1013
            +++GG P++  E+EL+  F +YGE++ V + P      +    FV FA++E AER   +  + L+   ++L +          GK++LQ+ +
Sbjct:   33 IFVGGFPQNTTEEELKSFFCKYGEIKDVKIIPDKAGQAKGSYGFVTFASQEVAERIITEQAETLVFRDRKLNIGRAVKKQPLTGKSELQNTL 124
The following BLAST results are available for this feature:
BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RBM228.760e-15553.43RNA binding motif protein 22 [Source:HGNC Symbol;A... [more]
RBM221.530e-10142.32RNA binding motif protein 22 [Source:HGNC Symbol;A... [more]
RBM221.350e-8162.43RNA binding motif protein 22 [Source:HGNC Symbol;A... [more]
RBM226.188e-4765.71RNA binding motif protein 22 [Source:HGNC Symbol;A... [more]
U2SURP1.713e-635.63U2 snRNP associated SURP domain containing [Source... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbm-224.302e-13149.75RNA Binding Motif protein homolog [Source:UniProt... [more]
tiar-35.240e-833.33TIA-1/TIAL RNA binding protein homolog [Source:Un... [more]
tiar-24.819e-636.49TIA-1/TIAL RNA binding protein homolog [Source:Un... [more]
grld-19.718e-628.57Glutamate Receptor Level Decreased [Source:UniPro... [more]
grld-19.718e-628.57Glutamate Receptor Level Decreased [Source:UniPro... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
CG146411.522e-14660.97gene:FBgn0037220 transcript:FBtr0078985[more]
CG93464.363e-633.72gene:FBgn0034572 transcript:FBtr0071526[more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbm221.773e-15264.19RNA binding motif protein 22 [Source:NCBI gene;Acc... [more]
zgc:1656032.935e-630.77zgc:165603 [Source:ZFIN;Acc:ZDB-GENE-070620-21][more]
zgc:1230103.400e-637.66zgc:123010 [Source:ZFIN;Acc:ZDB-GENE-051120-15][more]
u2surp5.414e-635.63U2 snRNP-associated SURP domain containing [Source... [more]
u2surp6.499e-635.63U2 snRNP-associated SURP domain containing [Source... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4
Match NameE-valueIdentityDescription
rbm223.376e-15553.72RNA binding motif protein 22 [Source:NCBI gene;Acc... [more]
rbm225.208e-14652.28RNA binding motif protein 22 [Source:NCBI gene;Acc... [more]
rbm221.304e-13850.84RNA binding motif protein 22 [Source:NCBI gene;Acc... [more]
rbm229.256e-12751.88RNA binding motif protein 22 [Source:NCBI gene;Acc... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rbm226.014e-15553.43RNA binding motif protein 22 [Source:MGI Symbol;Ac... [more]
Tial19.827e-730.56Tia1 cytotoxic granule-associated RNA binding prot... [more]
U2surp1.004e-635.63U2 snRNP-associated SURP domain containing [Source... [more]
Tia11.517e-632.00cytotoxic granule-associated RNA binding protein 1... [more]
U2surp3.267e-635.63U2 snRNP-associated SURP domain containing [Source... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q7ZXB5|RBM22_XENLA2.574e-15654.44Pre-mRNA-splicing factor RBM22 OS=Xenopus laevis O... [more]
sp|Q6P616|RBM22_XENTR1.789e-15453.72Pre-mRNA-splicing factor RBM22 OS=Xenopus tropical... [more]
sp|Q4V7D7|RBM22_RAT2.872e-15453.90Pre-mRNA-splicing factor RBM22 OS=Rattus norvegicu... [more]
sp|Q8BHS3|RBM22_MOUSE4.207e-15453.43Pre-mRNA-splicing factor RBM22 OS=Mus musculus OX=... [more]
sp|Q4R4J1|RBM22_MACFA4.207e-15453.43Pre-mRNA-splicing factor RBM22 OS=Macaca fascicula... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0R3UMU71.997e-16869.50Uncharacterized protein OS=Mesocestoides corti OX=... [more]
A0A0X3P3Q41.400e-16769.47Pre-mRNA-splicing factor RBM22 (Fragment) OS=Schis... [more]
A0A3S5BS632.148e-16467.60Uncharacterized protein OS=Protopolystoma xenopodi... [more]
A0A0R3SAW96.287e-16367.92Uncharacterized protein OS=Hymenolepis diminuta OX... [more]
A0A1S8WI401.311e-16266.04Uncharacterized protein (Fragment) OS=Opisthorchis... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000019080.23.122e-15855.50pre-mRNA-splicing factor RBM22-like [Source:NCBI g... [more]
ENSAMXT00000042091.15.472e-15662.57pre-mRNA-splicing factor RBM22-like [Source:NCBI g... [more]
rbm225.790e-15364.52RNA binding motif protein 22 [Source:NCBI gene;Acc... [more]
rbm229.205e-12657.10RNA binding motif protein 22 [Source:NCBI gene;Acc... [more]
u2surp1.872e-636.78U2 snRNP-associated SURP domain containing [Source... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rbm225.208e-9860.59RNA binding motif protein 22 [Source:NCBI gene;Acc... [more]
tia1l4.042e-631.94cytotoxic granule-associated RNA binding protein 1... [more]
zgc:1230105.342e-641.18zgc:123010 [Source:ZFIN;Acc:ZDB-GENE-051120-15][more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3
Match NameE-valueIdentityDescription
ECM21.660e-1942.86Pre-mRNA splicing factor; facilitates the cooperat... [more]
NAM85.161e-832.97RNA binding protein, component of the U1 snRNP pro... [more]
NGR11.127e-630.23RNA binding protein that negatively regulates grow... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 3
Match NameE-valueIdentityDescription
EDO319812.063e-14458.43Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO367262.375e-1132.62Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO327302.569e-723.98Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rbm228.535e-15564.84RNA binding motif protein 22 [Source:NCBI gene;Acc... [more]
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BLAST of Pre-mRNA-splicing factor RBM22 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000027513.10.000e+099.69SMESG000027513.1[more]
SMESG000059000.11.521e-12454.37SMESG000059000.1[more]
SMESG000044648.17.455e-835.62SMESG000044648.1[more]
SMESG000055085.13.529e-731.58SMESG000055085.1[more]
SMESG000061507.11.100e-628.26SMESG000061507.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30002608 ID=SMED30002608|Name=Pre-mRNA-splicing factor RBM22|organism=Schmidtea mediterranea sexual|type=transcript|length=1366bp
GAATATATTAAATTATTAGTTGCATTTATAAATTTTTAAATTATTTATTA
TTTTATCAATTTATAATTTTTATGACTTCCAGCAAATCTACAAATAACTA
CAACAGGCAAAATTGGGAACAATCAGATTTCCCAATTGTATGTGAAACAT
GTTTAGGGGATAATTCATTTGTTCGTATGACTAAAGAACCTTATGGAAAG
GAATGTAAAATATGTCAAAGGCCTTTTACGATTTTTCGTTGGCAACCTGG
ATCTAAAGCTCGATTTAAAAAAACAGAAGTATGTCAAGTTTGTGCAAAAA
CAAAAAATGTATGTCAAACTTGTATTCTGGATTTGGAGTATGGCTTGCCA
GTTCAAGTTCGTGATAATGCTCTGAAAATTAATCAGAATCTTCCCCGAGG
AGCTGTTAATCGTGAGTTTAATCAGCAACAGTTGGAACAACTGATGTCAA
CAAGTAAGGATGTCACAGCTCCATTTGCTGGTCTGGATGCCCCTGGAAAG
ATAAAAAACAATGACATGCTATTGAAATTAGCAAGAACTGAACCTTACTA
TCGAAGAAACCGACCCCACATTTGCTCATTTTACGTTAAGGGTGAATGCA
AACGTGGCGAAGAGTGTCCATTCCGTCACGAAAAACCGACAGATCCCGAC
GATCCTTTGTCAAATCAGAACATAAAAGATCGATTCTATGGACTGGCAGA
TCCTGTGGCACATAAACTAATGGATAAATATAAGAGTATGCCGCAACTTA
CACCTCCAGAGGACAAATCAATAACAACACTGTATATCGGTGGCGTGCCG
GAATCGATAGGAGAGAAGGAATTGCGAGACCGATTTTATCAATACGGTGA
GCTGCGATCTGTCACTGTTTACCCTCGTCAACGATGCGCGTTTGTTCAAT
TCGCAACAAGAGAGTCAGCGGAGCGGGCCGCTGAGAAAAGCTACGATAAA
TTAATCATGGCCGGACAGAGACTGACAGTTAACTGGGGAAAGGCGCAATT
GCAGAGCGAGATCGAACATGGTAAGCACATCAGCGGTAAATCAATGTTGC
CCAATGTTCCTGGACTTCCACCGGTTGTATCAATGAGTTTCCCGCCTCCG
CCAATCATGCTGAATTGGACACCAAGTTTGATGCCACCCGGAGCTCATTT
TAATGCAATCAATTCAGCCCCAATAATTCCTCCCCCTCCCCCTCCTCCCA
CCATTGGATCTGCAACTGACGCTCGCCTGAGTGTTCATTATCCAAGCCAA
GATCCGAATCGATTTGGGGCTGCTGTTAATAAACACTGATTTTTTGCTCT
AATTGTGTTAATAATACAATTTGATTCTTGACTGACTTGTGTTTGTGTGG
CCTTCATAGATTTAAA
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protein sequence of SMED30002608-orf-1

>SMED30002608-orf-1 ID=SMED30002608-orf-1|Name=SMED30002608-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=406bp
MTSSKSTNNYNRQNWEQSDFPIVCETCLGDNSFVRMTKEPYGKECKICQR
PFTIFRWQPGSKARFKKTEVCQVCAKTKNVCQTCILDLEYGLPVQVRDNA
LKINQNLPRGAVNREFNQQQLEQLMSTSKDVTAPFAGLDAPGKIKNNDML
LKLARTEPYYRRNRPHICSFYVKGECKRGEECPFRHEKPTDPDDPLSNQN
IKDRFYGLADPVAHKLMDKYKSMPQLTPPEDKSITTLYIGGVPESIGEKE
LRDRFYQYGELRSVTVYPRQRCAFVQFATRESAERAAEKSYDKLIMAGQR
LTVNWGKAQLQSEIEHGKHISGKSMLPNVPGLPPVVSMSFPPPPIMLNWT
PSLMPPGAHFNAINSAPIIPPPPPPPTIGSATDARLSVHYPSQDPNRFGA
AVNKH*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
GO:0046872metal ion binding
GO:0000166nucleotide binding
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR000571Znf_CCCH
IPR012677Nucleotide-bd_a/b_plait_sf