decaprenyl-diphosphate synthase subunit 2

Overview
Namedecaprenyl-diphosphate synthase subunit 2 (AHY82412.1)
Smed IDSMED30002588
Length (bp)1388
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of decaprenyl-diphosphate synthase subunit 2 (SMED30002588) t-SNE clustered cells

Violin plots show distribution of expression levels for decaprenyl-diphosphate synthase subunit 2 (SMED30002588) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of decaprenyl-diphosphate synthase subunit 2 (SMED30002588) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for decaprenyl-diphosphate synthase subunit 2 (SMED30002588) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30002588

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30002588SMESG000077657.1 SmedASXL_006388SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30002588SMESG000077657.1 SmedASXL_006388SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Human
Match: PDSS2 (decaprenyl diphosphate synthase subunit 2 [Source:HGNC Symbol;Acc:HGNC:23041])

HSP 1 Score: 148.288 bits (373), Expect = 1.633e-39
Identity = 81/200 (40.50%), Postives = 125/200 (62.50%), Query Frame = 2 
Query:  290 KTP--WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE-------------QRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENY 841
            K+P  W +++  +E+IV YP+S +++R L+SDE++++A QVRKLVGT HPLL TA+ L+ D+    +LRGL+VLLISK     P ++N               QRS+AEI E  H A+ +H+ +VN+ E    + P     DMQFGNK+A L GD+LLA+    LA  QNT +V  ++  + D ++ ++ + N  ++E+Y
Sbjct:   44 KSPAHWNQVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQLRGLVVLLISKAAG--PSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLK---DMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHE-NSTSKESY 237
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Human
Match: PDSS2 (decaprenyl diphosphate synthase subunit 2 [Source:HGNC Symbol;Acc:HGNC:23041])

HSP 1 Score: 139.813 bits (351), Expect = 6.373e-38
Identity = 76/171 (44.44%), Postives = 108/171 (63.16%), Query Frame = 2 
Query:  290 KTP--WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE-------------QRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNT 754
            K+P  W +++  +E+IV YP+S +++R L+SDE++++A QVRKLVGT HPLL TA+ L+ D+    +LRGL+VLLISK     P ++N               QRS+AEI E  H A+ +H+ +VN+ E    + P     DMQFGNK+A L GD+LLA+    LA  QNT
Sbjct:   44 KSPAHWNQVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQLRGLVVLLISKAAG--PSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLK---DMQFGNKIAILSGDFLLANACNGLALLQNT 209
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Human
Match: PDSS1 (decaprenyl diphosphate synthase subunit 1 [Source:HGNC Symbol;Acc:HGNC:17759])

HSP 1 Score: 60.077 bits (144), Expect = 3.746e-9
Identity = 33/101 (32.67%), Postives = 55/101 (54.46%), Query Frame = 2 
Query:  542 INAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            + A QR++A I E  HTA  +H D+++   S + K T    +  +G K A L GD +L++ S ALA   NT +++ +++ I D +   F ++     EN R
Sbjct:  158 VQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHT---VNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENER 255
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Fly
Match: Pdss2 (gene:FBgn0037044 transcript:FBtr0345136)

HSP 1 Score: 132.88 bits (333), Expect = 6.784e-34
Identity = 72/191 (37.70%), Postives = 111/191 (58.12%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE----------QRSVAEIVETAHTAICIHKDLVNIEKSPQ-NKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            W + +  +E+IV YP+S +++R+L+SDEI +VA  +RKLVG+ HPL++TAK L+ + +   +  GLIVLL+SK     P   + E          QR++AE+ E    +  +H  +VN++ S Q  +  + Y DM FGNK+  L GDYLL   S  LA  +N  +V  +S  + D  ES F  +   +E+N
Sbjct:   67 WNRAVSEAERIVGYPTSFLSLRWLLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDDMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEF--IGERDEQN 255
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Fly
Match: Pdss2 (gene:FBgn0037044 transcript:FBtr0078287)

HSP 1 Score: 132.88 bits (333), Expect = 6.784e-34
Identity = 72/191 (37.70%), Postives = 111/191 (58.12%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE----------QRSVAEIVETAHTAICIHKDLVNIEKSPQ-NKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            W + +  +E+IV YP+S +++R+L+SDEI +VA  +RKLVG+ HPL++TAK L+ + +   +  GLIVLL+SK     P   + E          QR++AE+ E    +  +H  +VN++ S Q  +  + Y DM FGNK+  L GDYLL   S  LA  +N  +V  +S  + D  ES F  +   +E+N
Sbjct:   67 WNRAVSEAERIVGYPTSFLSLRWLLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDDMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEF--IGERDEQN 255
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Fly
Match: qless (gene:FBgn0051005 transcript:FBtr0085769)

HSP 1 Score: 57.7658 bits (138), Expect = 1.117e-8
Identity = 42/168 (25.00%), Postives = 81/168 (48.21%), Query Frame = 2 
Query:  368 LISDEITSVASQVRKLV--GTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE-------QRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            ++ D++      VR L+  GT  P L T  +   D QG   LR ++ +L++K      + +N E       QR +A   E  H+A  +H D+++     + KP+    +  + +K  T+ GDY+L+  S  +A  ++ ++   +S+ + D ++  F ++     EN R
Sbjct:  116 ILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQG-KALRPMVTMLMAKAIN---YHLNNESHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPS---VNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENER 276
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Fly
Match: qless (gene:FBgn0051005 transcript:FBtr0345211)

HSP 1 Score: 57.7658 bits (138), Expect = 1.117e-8
Identity = 42/168 (25.00%), Postives = 81/168 (48.21%), Query Frame = 2 
Query:  368 LISDEITSVASQVRKLV--GTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE-------QRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            ++ D++      VR L+  GT  P L T  +   D QG   LR ++ +L++K      + +N E       QR +A   E  H+A  +H D+++     + KP+    +  + +K  T+ GDY+L+  S  +A  ++ ++   +S+ + D ++  F ++     EN R
Sbjct:  116 ILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQG-KALRPMVTMLMAKAIN---YHLNNESHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPS---VNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENER 276
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Zebrafish
Match: pdss2 (prenyl (decaprenyl) diphosphate synthase, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040718-43])

HSP 1 Score: 153.68 bits (387), Expect = 7.380e-42
Identity = 80/206 (38.83%), Postives = 127/206 (61.65%), Query Frame = 2 
Query:  263 FEVNYFNMWKTP----WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTF---TRPPF------AINAEQRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            F + + +++  P    W K++  +E+IV YP+S +++R L+SDE+++VA  VRKLVGT HPLL TA+  + D++   ++RGL+VLL+SK     +  P        I   QR++AEI E  HTA  +H+ +VN+ E +  + P     DMQFGNKMA L GD+LLA+    LA+  +T +V  +S  IGD ++ ++ + +   EE+
Sbjct:   10 FGLRHLSIFSNPSPSSWTKVVSDAEKIVGYPTSFMSLRCLLSDELSNVAMHVRKLVGTKHPLLNTARGFVYDSRNNLQMRGLVVLLMSKAAGPSSSDPIHDSMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWTNSDGPLK---DMQFGNKMAVLSGDFLLANACTGLAQLNDTKVVELISSAIGDVVQGIYHESSGSAEED 212
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Zebrafish
Match: pdss1 (prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430])

HSP 1 Score: 60.4622 bits (145), Expect = 1.713e-9
Identity = 39/130 (30.00%), Postives = 67/130 (51.54%), Query Frame = 2 
Query:  464 DTQGVTELRGLIVLLISKT---FTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            D +G    R +IV+L+++     +     +   QRS+A I E  HTA  +H D+++     + K T    +  +G + A L GD++L++ S ALA   NT +V+ +S+ I D +   F ++     EN R
Sbjct:  126 DGKG-KAFRPMIVILMARACNVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDVIDDSDKRRGKNT---INNVWGERKAILAGDFILSAASMALARIGNTTVVSVLSQVIEDLVRGEFMQLGSKENENER 251
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Xenopus
Match: hsd11b1l (hydroxysteroid (11-beta) dehydrogenase 1-like [Source:Xenbase;Acc:XB-GENE-5851849])

HSP 1 Score: 158.303 bits (399), Expect = 2.303e-43
Identity = 83/182 (45.60%), Postives = 117/182 (64.29%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKT---------FTRPPFA--INAEQRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLF 808
            W K++  +E+IV YP+S +++R L+SDE+ ++A QVRKLVGT HPLL TA+T +++     ++RGL+VLLISK            +P  A  I+A QRS+AEI E  HTA  +H+ +VNI E    + P     DMQFGNKMA L GD+LLA+    LA+ QN  +V  VS  IGD ++ ++
Sbjct:   39 WNKVVSDAEKIVGYPTSFMSLRCLLSDELNNIAIQVRKLVGTKHPLLNTARTFVNEKGNNRQMRGLVVLLISKAAGLSKSADHMFQPDLASGISARQRSLAEITELIHTAFLVHRGIVNINELKTCDGPIK---DMQFGNKMAILSGDFLLANACIGLADLQNAKVVEIVSSAIGDMVKGVY 217
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Xenopus
Match: pdss1 (decaprenyl diphosphate synthase subunit 1 [Source:NCBI gene;Acc:779676])

HSP 1 Score: 54.299 bits (129), Expect = 1.347e-7
Identity = 30/101 (29.70%), Postives = 52/101 (51.49%), Query Frame = 2 
Query:  542 INAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            ++  QR++AEI E  HTA  +H D+++   S + K T       +G + A L GD +L+  + A+A   NT ++  +S+   D +   F ++     EN R
Sbjct:   35 VHPSQRTIAEISEMIHTASLVHDDVIDGSDSRRGKQT---VSGIWGERKAVLAGDLMLSVAAVAMARIGNTTVIALISQIAIDLVRGEFLQLGSKENENER 132
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Xenopus
Match: pdss1 (decaprenyl diphosphate synthase subunit 1 [Source:NCBI gene;Acc:779676])

HSP 1 Score: 54.6842 bits (130), Expect = 1.448e-7
Identity = 30/101 (29.70%), Postives = 52/101 (51.49%), Query Frame = 2 
Query:  542 INAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            ++  QR++AEI E  HTA  +H D+++   S + K T       +G + A L GD +L+  + A+A   NT ++  +S+   D +   F ++     EN R
Sbjct:   57 VHPSQRTIAEISEMIHTASLVHDDVIDGSDSRRGKQT---VSGIWGERKAVLAGDLMLSVAAVAMARIGNTTVIALISQIAIDLVRGEFLQLGSKENENER 154
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Xenopus
Match: pdss1 (decaprenyl diphosphate synthase subunit 1 [Source:NCBI gene;Acc:779676])

HSP 1 Score: 55.0694 bits (131), Expect = 1.519e-7
Identity = 30/101 (29.70%), Postives = 52/101 (51.49%), Query Frame = 2 
Query:  542 INAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            ++  QR++AEI E  HTA  +H D+++   S + K T       +G + A L GD +L+  + A+A   NT ++  +S+   D +   F ++     EN R
Sbjct:  154 VHPSQRTIAEISEMIHTASLVHDDVIDGSDSRRGKQT---VSGIWGERKAVLAGDLMLSVAAVAMARIGNTTVIALISQIAIDLVRGEFLQLGSKENENER 251
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Mouse
Match: Pdss2 (prenyl (solanesyl) diphosphate synthase, subunit 2 [Source:MGI Symbol;Acc:MGI:1918615])

HSP 1 Score: 150.984 bits (380), Expect = 4.749e-41
Identity = 81/194 (41.75%), Postives = 120/194 (61.86%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE-------------QRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            W +++  +E+IV YP+S +++R L+SDE++++A QVRKLVGT HPLL TA+ L+ D++   +LRGL+VLLISK     P   NA              QRS+AEI E  HTA+ +H+ +VN+ E    + P     DMQFGNK+A L GD+LLA+    LA  QNT +V  +S  + D +  ++ + +   +EN
Sbjct:   50 WNQVVSEAEKIVGYPASFMSLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQLRGLVVLLISKAAG--PSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLK---DMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKEN 238
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Mouse
Match: Pdss2 (prenyl (solanesyl) diphosphate synthase, subunit 2 [Source:MGI Symbol;Acc:MGI:1918615])

HSP 1 Score: 150.599 bits (379), Expect = 4.964e-41
Identity = 81/194 (41.75%), Postives = 120/194 (61.86%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE-------------QRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            W +++  +E+IV YP+S +++R L+SDE++++A QVRKLVGT HPLL TA+ L+ D++   +LRGL+VLLISK     P   NA              QRS+AEI E  HTA+ +H+ +VN+ E    + P     DMQFGNK+A L GD+LLA+    LA  QNT +V  +S  + D +  ++ + +   +EN
Sbjct:   50 WNQVVSEAEKIVGYPASFMSLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQLRGLVVLLISKAAG--PSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLK---DMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKEN 238
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Mouse
Match: Pdss2 (prenyl (solanesyl) diphosphate synthase, subunit 2 [Source:MGI Symbol;Acc:MGI:1918615])

HSP 1 Score: 150.984 bits (380), Expect = 1.369e-40
Identity = 81/194 (41.75%), Postives = 120/194 (61.86%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE-------------QRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            W +++  +E+IV YP+S +++R L+SDE++++A QVRKLVGT HPLL TA+ L+ D++   +LRGL+VLLISK     P   NA              QRS+AEI E  HTA+ +H+ +VN+ E    + P     DMQFGNK+A L GD+LLA+    LA  QNT +V  +S  + D +  ++ + +   +EN
Sbjct:   50 WNQVVSEAEKIVGYPASFMSLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQLRGLVVLLISKAAG--PSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLK---DMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKEN 238
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Mouse
Match: Pdss1 (prenyl (solanesyl) diphosphate synthase, subunit 1 [Source:MGI Symbol;Acc:MGI:1889278])

HSP 1 Score: 61.2326 bits (147), Expect = 4.950e-10
Identity = 34/101 (33.66%), Postives = 55/101 (54.46%), Query Frame = 2 
Query:  542 INAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            + A QRS+A + E  HTA  +H D+++   S + K T    +  +G K A L GD +L++ S ALA   NT +V+ +++ I D +   F ++     EN R
Sbjct:  152 MQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHT---VNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENER 249
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Mouse
Match: Pdss1 (prenyl (solanesyl) diphosphate synthase, subunit 1 [Source:MGI Symbol;Acc:MGI:1889278])

HSP 1 Score: 61.2326 bits (147), Expect = 1.169e-9
Identity = 34/101 (33.66%), Postives = 55/101 (54.46%), Query Frame = 2 
Query:  542 INAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            + A QRS+A + E  HTA  +H D+++   S + K T    +  +G K A L GD +L++ S ALA   NT +V+ +++ I D +   F ++     EN R
Sbjct:  152 MQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHT---VNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENER 249
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. UniProt/SwissProt
Match: sp|Q33DR3|DLP1_MOUSE (Decaprenyl-diphosphate synthase subunit 2 OS=Mus musculus OX=10090 GN=Pdss2 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.578e-40
Identity = 81/194 (41.75%), Postives = 120/194 (61.86%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE-------------QRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            W +++  +E+IV YP+S +++R L+SDE++++A QVRKLVGT HPLL TA+ L+ D++   +LRGL+VLLISK     P   NA              QRS+AEI E  HTA+ +H+ +VN+ E    + P     DMQFGNK+A L GD+LLA+    LA  QNT +V  +S  + D +  ++ + +   +EN
Sbjct:   50 WNQVVSEAEKIVGYPASFMSLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQLRGLVVLLISKAAG--PSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLK---DMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKEN 238
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. UniProt/SwissProt
Match: sp|Q86YH6|DLP1_HUMAN (Decaprenyl-diphosphate synthase subunit 2 OS=Homo sapiens OX=9606 GN=PDSS2 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 7.841e-39
Identity = 81/200 (40.50%), Postives = 125/200 (62.50%), Query Frame = 2 
Query:  290 KTP--WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAE-------------QRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENY 841
            K+P  W +++  +E+IV YP+S +++R L+SDE++++A QVRKLVGT HPLL TA+ L+ D+    +LRGL+VLLISK     P ++N               QRS+AEI E  H A+ +H+ +VN+ E    + P     DMQFGNK+A L GD+LLA+    LA  QNT +V  ++  + D ++ ++ + N  ++E+Y
Sbjct:   44 KSPAHWNQVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQLRGLVVLLISKAAG--PSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLK---DMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHE-NSTSKESY 237
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. UniProt/SwissProt
Match: sp|Q5U2R1|DLP1_RAT (Decaprenyl-diphosphate synthase subunit 2 OS=Rattus norvegicus OX=10116 GN=Pdss2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 8.453e-38
Identity = 77/192 (40.10%), Postives = 121/192 (63.02%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTF---TRPPFAINAE--------QRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            W +++  +E+IV YP+S +++R L+SDE+++VA QVRKLVGT HPLL TA+  + D++   +LRGL+VLLISK     TR   + N +        QR++AEI E  HTA+ +H+ +VN+ E    + P     DM+FGNK+A L GD+LLA+    LA  QNT +V  ++  + D ++ ++ + +   + N
Sbjct:   50 WNQVVSEAEKIVGYPASFMSLRCLLSDELSNVAMQVRKLVGTQHPLLTTARGFVHDSRHNLQLRGLVVLLISKAAGPSTRNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLK---DMKFGNKIAVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQENSASTQGN 238
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. UniProt/SwissProt
Match: sp|Q6CBH3|COQ1_YARLI (Probable hexaprenyl pyrophosphate synthase, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=COQ1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.698e-17
Identity = 75/283 (26.50%), Postives = 126/283 (44.52%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISK-------------TF----------------------------------------TRP----PFAINA---EQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVN---VDNEE-----NYRRYV---YXXXXXXXXKCCKISVSLRTNVNDFVD 934
            W   +K++ ++V   + + +   ++S E++++A+ +  L+G+ HP L    T    ++G   +R LIVLL+S+             TF                                        +RP    P+  N    +QR +AEIVE  HTA  +H D+++   + +  PT    ++ FGNKMA L GD+LL   S A+A  +N  ++  +S  I + +E  F ++    VDN E      +  Y+   YL + SL+SK C+ +  L    N  VD
Sbjct:   49 WSGAVKQASRLVETDTPIRDPFSIVSQEMSTLANNIGSLIGSGHPTLNKVATYYFQSEG-KHVRPLIVLLLSRALSAIPESERDRGTFDASDVTENVGELNPEPSINDPLSPIEILHGINPDIVLNPLSRPSDPLPYESNGILPKQRRLAEIVEMIHTASLLHDDVIDNSATRRGSPTG---NVAFGNKMAILAGDFLLGRASVAIARLRNAEVIELLSTTIANLVEGEFMQLKNTIVDNSEIANKATFEYYIHKTYLKTASLMSKSCRAAAVLSGARNPIVD 327
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. UniProt/SwissProt
Match: sp|Q7S565|COQ1_NEUCR (Probable hexaprenyl pyrophosphate synthase, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=NCU02305 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.109e-15
Identity = 73/274 (26.64%), Postives = 121/274 (44.16%), Query Frame = 2 
Query:  368 LISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISK-----------------------TFTRP-------------PFAINAE------QRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKV--NVDNEEN----------YRRYVYXXXXXXXXKCCKISVSLRTN---------------------VNDFVDLTKSDEDLAE 964
            L++ E+  +   +RKL+G+ HP L  A    +  +G   +R LIVLL+S+                       T   P             P +I A+      QR +AEI E  HTA  +H D+++  +S +  P+    +++FGNKMA L GD+LL   S ALA  ++  +V  ++  I + +E  F ++     +E+N          Y +  YL + SL+SK C+ S  L                        V+D +D T+S+++L +
Sbjct:   86 LVAGEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEG-KHVRPLIVLLMSRATALCPKAPQRQQSTLQASAAIDTSISPLNILSDFNPSDATPVSIPADTDILPSQRRLAEITELIHTASLLHDDVIDHSESRRGAPS---ANLEFGNKMAVLAGDFLLGRASVALARLRHAEVVELLATVIANLVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELGK 355
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. TrEMBL
Match: A0A023ZS21 (Decaprenyl-diphosphate synthase subunit 2 OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 621.313 bits (1601), Expect = 0.000e+0
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 2 
Query:  284 MWKTPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYRRYVYXXXXXXXXKCCKISVSLRTNVNDFVDLTKSDEDLAEKWSIHWCELYNICEHINALVIQLSNEKITSKIFPIXXXXXXXXXXXXXXXXXHEYLCKTKILVMNSHKSLPEYDLQSKSILAEMVELLYQDAIHSLNLCRMLP 1273
            MWKTPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEK PQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYRRYVYLSSGSLLSKCCKISVSLRTNVNDFVDLTKSDEDLAEKWSIHWCELYNICEHINALVIQLSNEKITSKIFPISKKLLQSDNLSDDLQFLHEYLCKTKILVMNSHKSLPEYDLQSKSILAEMVELLYQDAIHSLNLCRMLP
Sbjct:    1 MWKTPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKIPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYRRYVYLSSGSLLSKCCKISVSLRTNVNDFVDLTKSDEDLAEKWSIHWCELYNICEHINALVIQLSNEKITSKIFPISKKLLQSDNLSDDLQFLHEYLCKTKILVMNSHKSLPEYDLQSKSILAEMVELLYQDAIHSLNLCRMLP 330
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. TrEMBL
Match: A0A0U4Z8R2 (Subunit 2 of solanesyl diphosphate synthase OS=Schmidtea mediterranea OX=79327 GN=Smed-dlp1 PE=2 SV=1)

HSP 1 Score: 620.542 bits (1599), Expect = 0.000e+0
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 2 
Query:  284 MWKTPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYRRYVYXXXXXXXXKCCKISVSLRTNVNDFVDLTKSDEDLAEKWSIHWCELYNICEHINALVIQLSNEKITSKIFPIXXXXXXXXXXXXXXXXXHEYLCKTKILVMNSHKSLPEYDLQSKSILAEMVELLYQDAIHSLNLCRMLP 1273
            MWKTPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKS QNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYRRYVYLSSGSLLSKCCKISVSLRTNVNDFVDLTKSDEDLAEKWSIHWCELYNICEHINALVIQLSNEKITSKIFPISKKLLQSDNLSDDLQFLHEYLCKTKILVMNSHKSLPEYDLQSKSILAEMVELLYQDAIHSLNLCRMLP
Sbjct:    1 MWKTPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKSLQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYRRYVYLSSGSLLSKCCKISVSLRTNVNDFVDLTKSDEDLAEKWSIHWCELYNICEHINALVIQLSNEKITSKIFPISKKLLQSDNLSDDLQFLHEYLCKTKILVMNSHKSLPEYDLQSKSILAEMVELLYQDAIHSLNLCRMLP 330
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. TrEMBL
Match: A0A093GBK2 (Decaprenyl-diphosphate synthase subunit 2 (Fragment) OS=Dryobates pubescens OX=118200 GN=N307_01068 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.708e-45
Identity = 93/237 (39.24%), Postives = 146/237 (61.60%), Query Frame = 2 
Query:  296 PWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFA-----------INAEQRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN----------YRRYVYXXXXXXXXKCCKISVSLRTNVNDFVDLT 940
            PW +++  +E+IV YP+S +++R L+SDE++++A QVRKLVGT HPLL TA+  + D++   ++RGL++LLISK    P  A           I + QRS+AEI E  HTA  +H+ +VNI E  P + P     DMQFGNKMA L GD+LLA+   +LA+ QNT +V  +S  IGD ++ ++ + +  +EE+          ++  V+LS  +LL+K C+ ++ L  +  +  D+ 
Sbjct:    1 PWSEVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTKHPLLDTARGFVYDSRNNLQMRGLVILLISKA-AGPSTAELSFQHNMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKPCDGPLK---DMQFGNKMAVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYENSKSSEESCLTDDISISAWKEQVFLSHSALLAKSCQAAMELAKHSAEIQDMA 233
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. TrEMBL
Match: A0A091GD72 (Decaprenyl-diphosphate synthase subunit 2 (Fragment) OS=Cuculus canorus OX=55661 GN=N303_13517 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.132e-44
Identity = 94/238 (39.50%), Postives = 146/238 (61.34%), Query Frame = 2 
Query:  293 TPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFA-----------INAEQRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN----------YRRYVYXXXXXXXXKCCKISVSLRTNVNDFVDLT 940
            +PW +++  +E+IV YP+S +++R L+SDE++++A QVRKLVGT HPLL TA+  + D++   ++RGL+VLLISK    P  A           I + QRS+AEI E  HTA  +H+ +VNI E    + P     DMQFGNKMA L GD+LLA+   +LA+ QNT +V  +S  IGD ++ ++ + +  +EEN          ++  V+LS  +LL+K C+ ++ L  +  +  D+ 
Sbjct:    1 SPWSQVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTKHPLLDTARGFVYDSRNNLQMRGLVVLLISKA-AGPSTADLSFQHNMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKSCDGPLK---DMQFGNKMAVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYENSKSSEENCLTDDIGISTWKEQVFLSHSALLAKSCQAAMELAKHSAEIQDMA 234
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. TrEMBL
Match: A0A1V4JM19 (Decaprenyl-diphosphate synthase subunit 2 OS=Patagioenas fasciata monilis OX=372326 GN=PDSS2 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.733e-44
Identity = 94/237 (39.66%), Postives = 146/237 (61.60%), Query Frame = 2 
Query:  296 PWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFA-----------INAEQRSVAEIVETAHTAICIHKDLVNI-EKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN----------YRRYVYXXXXXXXXKCCKISVSLRTNVNDFVDLT 940
            PW +++  +E+IV YP+S +++R L+SDE++++A QVRKLVGT HPLL TA+  + D++   ++RGL+VLLISK    P  A           I + QRS+AEI E  HTA  +H+ +VNI E    + P     DMQFGNKMA L GD+LLA+   +LA+ QNT +V  +S  IGD ++ ++ + +  +EEN          ++ +V+LS  +LL+K C+ ++ L  +  +  D+ 
Sbjct:   25 PWSQVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTKHPLLDTARGFVYDSRNNLQMRGLVVLLISKA-AGPSTAELSFQHNMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKSCDGPLK---DMQFGNKMAVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYENSKSSEENCLTDDIGISTWKEHVFLSHSALLAKSCQAAMELAKHSAEIQDMA 257
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Cavefish
Match: pdss2 (decaprenyl diphosphate synthase subunit 2 [Source:NCBI gene;Acc:103043098])

HSP 1 Score: 151.754 bits (382), Expect = 3.136e-41
Identity = 78/197 (39.59%), Postives = 119/197 (60.41%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKT---------FTRPPF--AINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYY------DMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            W K++  +E+IV YP+S +++R L+SDE+++VA  VRKLVGT HPLL TA+  + D++   ++RGL+VLL+SK             P     I   QR++AEI E  HTA  +H+ +VN+++        W Y      D+QFGNKMA L GD+LLA+    LA+  NT +V  +S  IGD ++ ++ + ++  EE 
Sbjct:   31 WTKVVSDAEKIVGYPTSFMSLRCLLSDELSNVAMHVRKLVGTKHPLLNTARGFVYDSKHNLQMRGLVVLLMSKAAGPSSTSSDVLLPDMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKE--------WTYSDGPLKDLQFGNKMAILSGDFLLANACTGLAQLNNTKVVELISSAIGDLVQGVYHESSISTEEG 219
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Cavefish
Match: pdss2 (decaprenyl diphosphate synthase subunit 2 [Source:NCBI gene;Acc:103043098])

HSP 1 Score: 151.369 bits (381), Expect = 4.917e-41
Identity = 78/197 (39.59%), Postives = 119/197 (60.41%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKT---------FTRPPF--AINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYY------DMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            W K++  +E+IV YP+S +++R L+SDE+++VA  VRKLVGT HPLL TA+  + D++   ++RGL+VLL+SK             P     I   QR++AEI E  HTA  +H+ +VN+++        W Y      D+QFGNKMA L GD+LLA+    LA+  NT +V  +S  IGD ++ ++ + ++  EE 
Sbjct:   41 WTKVVSDAEKIVGYPTSFMSLRCLLSDELSNVAMHVRKLVGTKHPLLNTARGFVYDSKHNLQMRGLVVLLMSKAAGPSSTSSDVLLPDMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKE--------WTYSDGPLKDLQFGNKMAILSGDFLLANACTGLAQLNNTKVVELISSAIGDLVQGVYHESSISTEEG 229
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Cavefish
Match: pdss2 (decaprenyl diphosphate synthase subunit 2 [Source:NCBI gene;Acc:103043098])

HSP 1 Score: 151.369 bits (381), Expect = 6.202e-41
Identity = 78/197 (39.59%), Postives = 119/197 (60.41%), Query Frame = 2 
Query:  299 WQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKT---------FTRPPF--AINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYY------DMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN 838
            W K++  +E+IV YP+S +++R L+SDE+++VA  VRKLVGT HPLL TA+  + D++   ++RGL+VLL+SK             P     I   QR++AEI E  HTA  +H+ +VN+++        W Y      D+QFGNKMA L GD+LLA+    LA+  NT +V  +S  IGD ++ ++ + ++  EE 
Sbjct:   53 WTKVVSDAEKIVGYPTSFMSLRCLLSDELSNVAMHVRKLVGTKHPLLNTARGFVYDSKHNLQMRGLVVLLMSKAAGPSSTSSDVLLPDMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKE--------WTYSDGPLKDLQFGNKMAILSGDFLLANACTGLAQLNNTKVVELISSAIGDLVQGVYHESSISTEEG 241
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Cavefish
Match: pdss1 (decaprenyl diphosphate synthase subunit 1 [Source:NCBI gene;Acc:103030956])

HSP 1 Score: 56.9954 bits (136), Expect = 2.196e-8
Identity = 31/97 (31.96%), Postives = 53/97 (54.64%), Query Frame = 2 
Query:  554 QRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            QR++A I E  HTA  +H D+++   + + K T    +  +G + A L GD++L++ S ALA   N  +V+ +S+ I D +   F ++     EN R
Sbjct:  154 QRAIAMISEMIHTASLVHDDVIDGADTRRGKTT---INEVWGERKAILAGDFILSAASMALARIGNNAVVSVLSQVIEDLVRGEFMQLGSKENENER 247
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Sea Lamprey
Match: pdss2 (prenyl (decaprenyl) diphosphate synthase, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040718-43])

HSP 1 Score: 93.9745 bits (232), Expect = 1.130e-21
Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 2 
Query:  443 TAKTLISDTQGVTELRGLIVLLISKTFTRPPF-----------AINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLF 808
            T + L+ D+  + ++RGL+VLL+SK     P             I   QRS+AEI E  HTA  +H+ +V++  +      +   DM FGNKMA L GD LLA+ S  LA   NT++V  +S  IGD ++ LF
Sbjct:    4 THRGLVCDSSQMVQMRGLVVLLMSKAAGPKPSKQPDVNSLLVKGIPHSQRSLAEIAELIHTAFAVHRGIVDV--AAMVLSDDCRDDMDFGNKMAVLSGDLLLANASTGLARLNNTHVVELMSSAIGDLVQGLF 134
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Sea Lamprey
Match: pdss1 (prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430])

HSP 1 Score: 67.781 bits (164), Expect = 1.122e-12
Identity = 42/162 (25.93%), Postives = 84/162 (51.85%), Query Frame = 2 
Query:  368 LISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKT---FTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            L+ D+++++   ++K + T    L+       D +G +  R ++VLL+++           ++  QR +A + E  HTA  +H D+++   + + KP     + ++G K A L GD++L++ S ALA   N ++V+ +S+ I D +   F ++     EN R
Sbjct:   28 LVQDDMSNLCDDIKKELVTGIADLRDMTHYYFDGKGKS-FRPMVVLLMARACNFHQHNANEVSDSQRRIAMVAEMIHTASLVHDDVIDKANTRRGKPA---VNFKWGEKKAILAGDFILSAASVALARLGNGDVVSLLSQVIDDLVNGEFMQLGSKENENER 185
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Yeast
Match: COQ1 (Hexaprenyl pyrophosphate synthetase; catalyzes the first step in ubiquinone (coenzyme Q) biosynthesis [Source:SGD;Acc:S000000207])

HSP 1 Score: 62.7734 bits (151), Expect = 3.727e-11
Identity = 30/93 (32.26%), Postives = 52/93 (55.91%), Query Frame = 2 
Query:  539 AINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKV 817
             I  +QR +AEIVE  HTA  +H D+++   + + +P+    +  F NKMA L GD+LL   + +++   N  +V  +S  I + +E  F ++
Sbjct:  170 GILPKQRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPSG---NAAFTNKMAVLAGDFLLGRATVSISRLHNPEVVELMSNSIANLVEGEFMQL 259
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Nematostella
Match: EDO38895 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBM1])

HSP 1 Score: 124.02 bits (310), Expect = 1.972e-31
Identity = 67/190 (35.26%), Postives = 109/190 (57.37%), Query Frame = 2 
Query:  281 NMWKTPWQ----KIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTR--PPFAINAE----------QRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIES 802
            ++W    Q    K +  +E++V YP+S +++R L+SDE++++A  +++LVG+ HPL++TA+  + D Q   + RGL+VLL++K      P   ++ E          QR +AEI E  HTA  IH  +V++       PT  + DM+FGNKM+ L GD+LLA+    LA   +T +V  +S  I   +E 
Sbjct:   45 DLWTANQQDDLTKALSDAEKLVGYPTSFLSLRCLLSDELSNIAMYMKRLVGSRHPLVKTARGFVYDGQYSMQTRGLLVLLVAKAAAPCLPSNKVSMEHEAVSGIFPGQRQIAEITEMIHTAYLIHNGVVDLAAV----PTKEFKDMEFGNKMSVLTGDFLLANACTGLAALNDTQVVAMISTVISHLMEG 230
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Nematostella
Match: EDO48883 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RHN1])

HSP 1 Score: 54.299 bits (129), Expect = 5.308e-8
Identity = 50/197 (25.38%), Postives = 93/197 (47.21%), Query Frame = 2 
Query:  380 EITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKT---FTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEEN-------YRRYVYXXXXXXXXKCCKISVSLRTNVNDFVDLT 940
             ++ +  +++  + T    LQ       D +G   +R  IVLL++      +     I  +Q + A I E  HTA  IH D+++   + + K      ++ +G+K   L GDY+L+ VS A+A F N   V  +++ + + +   F  + + ++EN       Y +  Y  + SL++ CCK +V L  +  D  D+ 
Sbjct:  114 RLSGLCGRIKHELNTSVETLQRVSHYYFDGKG-KYIRPRIVLLMAAATNYHSHRSRVILHDQETAAMISEMIHTASLIHDDVIDRADTRRGKVA---INLMYGDKNCILAGDYILSRVSLAIARFGNVEAVKLLAEIVDELVRGEF--MQLGSKENPDERFTHYLKKTYKKTASLIACCCKTAVLLGDSPPDIQDIA 304
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Medaka
Match: pdss2 (decaprenyl diphosphate synthase subunit 2 [Source:NCBI gene;Acc:101174393])

HSP 1 Score: 144.436 bits (363), Expect = 1.361e-38
Identity = 74/180 (41.11%), Postives = 114/180 (63.33%), Query Frame = 2 
Query:  305 KIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFA------------INAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLF 808
            K++  +E+IV YP+S +++R L+SDE+++VA  +RKLVGT HPLL TA+  + D++   ++RGLIVLL+SK    P  A            I   QR++AEIVE  +TA  +H+ +VN+++   +       DM+FGNKMA L GD+LLA+    LA+  NT +V  +S  IGD ++ ++
Sbjct:   36 KVVSDAEKIVGYPTSFMSLRCLLSDELSNVAMHIRKLVGTQHPLLNTARGFVYDSKNNLQMRGLIVLLLSKA-AGPSHAADDALGQDMVSGIYPSQRNLAEIVELINTAFLVHRGVVNLKELTVSD--GLLKDMEFGNKMAVLSGDFLLANACTGLAQLNNTEVVELISSAIGDVVQGIY 212
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Medaka
Match: pdss2 (decaprenyl diphosphate synthase subunit 2 [Source:NCBI gene;Acc:101174393])

HSP 1 Score: 144.436 bits (363), Expect = 1.696e-38
Identity = 74/180 (41.11%), Postives = 114/180 (63.33%), Query Frame = 2 
Query:  305 KIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFA------------INAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLF 808
            K++  +E+IV YP+S +++R L+SDE+++VA  +RKLVGT HPLL TA+  + D++   ++RGLIVLL+SK    P  A            I   QR++AEIVE  +TA  +H+ +VN+++   +       DM+FGNKMA L GD+LLA+    LA+  NT +V  +S  IGD ++ ++
Sbjct:   36 KVVSDAEKIVGYPTSFMSLRCLLSDELSNVAMHIRKLVGTQHPLLNTARGFVYDSKNNLQMRGLIVLLLSKA-AGPSHAADDALGQDMVSGIYPSQRNLAEIVELINTAFLVHRGVVNLKELTVSD--GLLKDMEFGNKMAVLSGDFLLANACTGLAQLNNTEVVELISSAIGDVVQGIY 212
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Medaka
Match: pdss1 (decaprenyl diphosphate synthase subunit 1 [Source:NCBI gene;Acc:101168998])

HSP 1 Score: 56.225 bits (134), Expect = 1.837e-8
Identity = 39/159 (24.53%), Postives = 79/159 (49.69%), Query Frame = 2 
Query:  368 LISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            L   ++T++   ++K +      L++      D +G   +R +IV+L+++        +   Q+++A I E  HTA  +H D+++   + + K +    +  +G K A L GD++L++ S ALA   +  +V  +S+ I D +   F ++     EN R
Sbjct:   84 LAQKDLTTLYDDIKKELFISRTELKSLCDYYFDGRG-KAIRPIIVVLMARALN--IHNLLPGQKAIAMITEMIHTASLVHDDVIDGSDARRGKRS---LNEVWGEKKAILAGDFILSAASMALARIGDITVVKVLSQVIEDLVRGEFMQLGSKENENER 236
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Medaka
Match: pdss1 (decaprenyl diphosphate synthase subunit 1 [Source:NCBI gene;Acc:101168998])

HSP 1 Score: 55.0694 bits (131), Expect = 8.904e-8
Identity = 29/97 (29.90%), Postives = 52/97 (53.61%), Query Frame = 2 
Query:  554 QRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYR 844
            Q+++A I E  HTA  +H D+++   + + K +    +  +G K A L GD++L++ S ALA   +  +V  +S+ I D +   F ++     EN R
Sbjct:  166 QKAIAMITEMIHTASLVHDDVIDGSDARRGKRS---LNEVWGEKKAILAGDFILSAASMALARIGDITVVKVLSQVIEDLVRGEFMQLGSKENENER 259
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Planmine SMEST
Match: SMESG000077657.1 (SMESG000077657.1)

HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 2 
Query:  284 MWKTPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYRRYVYXXXXXXXXKCCKISVSLRTNVNDFVDLTKSDEDLAEKWSIHWCELYNICEHINALVIQLSNEKITSKIFPIXXXXXXXXXXXXXXXXXHEYLCKTKILVMNSHKSLPEYDLQSKSILAEMVELLYQDAIHSLNLCRMLP 1273
            MWKTPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYRRYVYLSSGSLLSKCCKISVSLRTNVNDFVDLTKSDEDLAEKWSIHWCELYNICEHINALVIQLSNEKITSKIFPISKKLLQSDNLSDDLQFLHEYLCKTKILVMNSHKSLPEYDLQSKSILAEMVELLYQDAIHSLNLCRMLP
Sbjct:    1 MWKTPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHPLLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYRRYVYLSSGSLLSKCCKISVSLRTNVNDFVDLTKSDEDLAEKWSIHWCELYNICEHINALVIQLSNEKITSKIFPISKKLLQSDNLSDDLQFLHEYLCKTKILVMNSHKSLPEYDLQSKSILAEMVELLYQDAIHSLNLCRMLP 330
[Close]
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Planmine SMEST
Match: SMESG000028940.1 (SMESG000028940.1)

HSP 1 Score: 48.521 bits (114), Expect = 6.474e-6
Identity = 41/133 (30.83%), Postives = 69/133 (51.88%), Query Frame = 2 
Query:  539 AINAEQRSVAEIVETAHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKALAEFQNTNIVNTVSKGIGDTIESLFCKV----NVDNE-ENYRRYVYXXXXXXXXKCCKISVSLRTNVN 922
            +I + Q  +A I E  HTA  +H DL++     +   +       FG + A L GDY+L   S+ LA+  N  +V+ +S+ I D I+    ++    N++ +  +Y +  Y  + SL++ CCK +V L TN N
Sbjct:  109 SILSTQYQIAMIAEMIHTASLMHDDLIDCSDIRRGMLSCH---KNFGPENAILGGDYILLCASQMLAKIGNCEVVSVISELINDLIKGEIMQLTSCENINGKLSHYYKKTYRKTASLIANCCK-AVILLTNSN 237
The following BLAST results are available for this feature:
BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 3
Match NameE-valueIdentityDescription
PDSS21.633e-3940.50decaprenyl diphosphate synthase subunit 2 [Source:... [more]
PDSS26.373e-3844.44decaprenyl diphosphate synthase subunit 2 [Source:... [more]
PDSS13.746e-932.67decaprenyl diphosphate synthase subunit 1 [Source:... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Pdss26.784e-3437.70gene:FBgn0037044 transcript:FBtr0345136[more]
Pdss26.784e-3437.70gene:FBgn0037044 transcript:FBtr0078287[more]
qless1.117e-825.00gene:FBgn0051005 transcript:FBtr0085769[more]
qless1.117e-825.00gene:FBgn0051005 transcript:FBtr0345211[more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
pdss27.380e-4238.83prenyl (decaprenyl) diphosphate synthase, subunit ... [more]
pdss11.713e-930.00prenyl (decaprenyl) diphosphate synthase, subunit ... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4
Match NameE-valueIdentityDescription
hsd11b1l2.303e-4345.60hydroxysteroid (11-beta) dehydrogenase 1-like [Sou... [more]
pdss11.347e-729.70decaprenyl diphosphate synthase subunit 1 [Source:... [more]
pdss11.448e-729.70decaprenyl diphosphate synthase subunit 1 [Source:... [more]
pdss11.519e-729.70decaprenyl diphosphate synthase subunit 1 [Source:... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Pdss24.749e-4141.75prenyl (solanesyl) diphosphate synthase, subunit 2... [more]
Pdss24.964e-4141.75prenyl (solanesyl) diphosphate synthase, subunit 2... [more]
Pdss21.369e-4041.75prenyl (solanesyl) diphosphate synthase, subunit 2... [more]
Pdss14.950e-1033.66prenyl (solanesyl) diphosphate synthase, subunit 1... [more]
Pdss11.169e-933.66prenyl (solanesyl) diphosphate synthase, subunit 1... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q33DR3|DLP1_MOUSE9.578e-4041.75Decaprenyl-diphosphate synthase subunit 2 OS=Mus m... [more]
sp|Q86YH6|DLP1_HUMAN7.841e-3940.50Decaprenyl-diphosphate synthase subunit 2 OS=Homo ... [more]
sp|Q5U2R1|DLP1_RAT8.453e-3840.10Decaprenyl-diphosphate synthase subunit 2 OS=Rattu... [more]
sp|Q6CBH3|COQ1_YARLI3.698e-1726.50Probable hexaprenyl pyrophosphate synthase, mitoch... [more]
sp|Q7S565|COQ1_NEUCR9.109e-1526.64Probable hexaprenyl pyrophosphate synthase, mitoch... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A023ZS210.000e+099.70Decaprenyl-diphosphate synthase subunit 2 OS=Schmi... [more]
A0A0U4Z8R20.000e+099.70Subunit 2 of solanesyl diphosphate synthase OS=Sch... [more]
A0A093GBK28.708e-4539.24Decaprenyl-diphosphate synthase subunit 2 (Fragmen... [more]
A0A091GD725.132e-4439.50Decaprenyl-diphosphate synthase subunit 2 (Fragmen... [more]
A0A1V4JM199.733e-4439.66Decaprenyl-diphosphate synthase subunit 2 OS=Patag... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
pdss23.136e-4139.59decaprenyl diphosphate synthase subunit 2 [Source:... [more]
pdss24.917e-4139.59decaprenyl diphosphate synthase subunit 2 [Source:... [more]
pdss26.202e-4139.59decaprenyl diphosphate synthase subunit 2 [Source:... [more]
pdss12.196e-831.96decaprenyl diphosphate synthase subunit 1 [Source:... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
pdss21.130e-2138.35prenyl (decaprenyl) diphosphate synthase, subunit ... [more]
pdss11.122e-1225.93prenyl (decaprenyl) diphosphate synthase, subunit ... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
COQ13.727e-1132.26Hexaprenyl pyrophosphate synthetase; catalyzes the... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO388951.972e-3135.26Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO488835.308e-825.38Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
pdss21.361e-3841.11decaprenyl diphosphate synthase subunit 2 [Source:... [more]
pdss21.696e-3841.11decaprenyl diphosphate synthase subunit 2 [Source:... [more]
pdss11.837e-824.53decaprenyl diphosphate synthase subunit 1 [Source:... [more]
pdss18.904e-829.90decaprenyl diphosphate synthase subunit 1 [Source:... [more]
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BLAST of decaprenyl-diphosphate synthase subunit 2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000077657.10.000e+0100.00SMESG000077657.1[more]
SMESG000028940.16.474e-630.83SMESG000028940.1[more]
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Cross References
External references for this transcript
DatabaseAccession
SmedGD GBrowseSMED30002588
GenBankAHY82412.1
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30002588 ID=SMED30002588|Name=decaprenyl-diphosphate synthase subunit 2|organism=Schmidtea mediterranea sexual|type=transcript|length=1388bp
TTTATCTATTATTTTGTATGATATTTTGTTTATATGTCTATCAAATTTAA
AAATATTTTTTGTTATTTATAGATGTCTGATGCTTTTTACAATTTCCCTG
GCTATTTAATCGACGTTATTGATAAAGATTGGATAACAGATTGCATCGAA
TTTGAAAAAATAGATATTAAAACTGAGTGTTTACCCAAGGCTAGTGATTC
GGATATAACCTTAAAAAGACTAAATTCTCAAAATAAAAAAATTGAAATAA
ATTACGATTTGATTCGAAGTCAATTATTTTAATATGTGGAAAACCCCTTG
GCAGAAAATTATTAAGCGTTCTGAACAAATTGTGTGCTACCCATCCTCCC
TTGTGAATATTCGTTATTTAATTAGTGATGAAATAACATCTGTTGCTTCT
CAAGTAAGAAAATTAGTAGGAACTCATCATCCTTTATTACAAACTGCTAA
AACATTAATAAGTGATACGCAAGGTGTAACTGAACTTCGTGGCCTAATAG
TTTTACTTATTTCTAAAACATTTACTCGGCCACCTTTTGCTATTAATGCT
GAACAACGCAGTGTCGCTGAAATAGTTGAAACTGCACATACTGCTATATG
TATACATAAAGATTTGGTTAATATTGAGAAAAGTCCCCAAAACAAACCTA
CAAATTGGTATTATGATATGCAATTCGGAAACAAAATGGCTACTTTGTGT
GGTGATTATTTACTCGCATCTGTTTCTAAAGCTTTAGCTGAATTTCAAAA
CACAAATATTGTTAACACAGTTTCAAAGGGTATTGGAGATACAATTGAGT
CGTTATTTTGTAAAGTAAATGTTGATAATGAAGAAAACTATCGACGCTAT
GTTTATTTGTCTAGTGGCTCACTTTTAAGTAAATGTTGTAAAATTTCCGT
TTCGTTGCGAACAAATGTTAACGATTTCGTTGATTTAACGAAGTCCGATG
AAGATCTGGCAGAAAAATGGTCAATTCATTGGTGTGAATTGTATAACATC
TGTGAACACATTAATGCGCTTGTAATTCAATTATCGAATGAGAAAATTAC
CAGTAAAATATTTCCAATTTCAAAAAAGTTATTACAATCAGACAATTTAT
CAGATGATCTGCAATTTTTGCATGAGTATTTGTGTAAAACTAAAATATTA
GTGATGAATTCTCACAAGAGTTTGCCGGAATATGATTTACAGAGCAAATC
CATTTTAGCGGAAATGGTGGAGCTGTTATATCAAGACGCAATTCACAGTC
TTAATTTGTGTAGGATGCTGCCTTGATGGATTTTGTATTGAATTTGAGTT
TATCTGTGACTGGTCACTAAATATCTTACTATGGCATTATGCATTCATTT
AGCATTTGTTACTATGGCAACGACAAATTTTATTAATC
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protein sequence of SMED30002588-orf-1

>SMED30002588-orf-1 ID=SMED30002588-orf-1|Name=SMED30002588-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=331bp
MWKTPWQKIIKRSEQIVCYPSSLVNIRYLISDEITSVASQVRKLVGTHHP
LLQTAKTLISDTQGVTELRGLIVLLISKTFTRPPFAINAEQRSVAEIVET
AHTAICIHKDLVNIEKSPQNKPTNWYYDMQFGNKMATLCGDYLLASVSKA
LAEFQNTNIVNTVSKGIGDTIESLFCKVNVDNEENYRRYVYLSSGSLLSK
CCKISVSLRTNVNDFVDLTKSDEDLAEKWSIHWCELYNICEHINALVIQL
SNEKITSKIFPISKKLLQSDNLSDDLQFLHEYLCKTKILVMNSHKSLPEY
DLQSKSILAEMVELLYQDAIHSLNLCRMLP*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR000092Polyprenyl_synt
IPR008949Isoprenoid_synthase_dom_sf
IPR000299FERM_domain
Vocabulary: biological process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Vocabulary: cellular component
TermDefinition
GO:0005856cytoskeleton
Vocabulary: molecular function
TermDefinition
GO:0016740transferase activity
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3DG3DSA:1.10.600.10coord: 21..220
e-value: 1.2E-30
score: 108.7
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILYSSF48576Terpenoid synthasescoord: 17..224
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 66..210
e-value: 6.1E-13
score: 48.4
NoneNo IPR availablePANTHERPTHR12001:SF55DECAPRENYL-DIPHOSPHATE SYNTHASE SUBUNIT 2coord: 4..211
NoneNo IPR availablePANTHERPTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEcoord: 4..211