Apical junction component 1 homolog

Overview


Name	Apical junction component 1 homolog
Smed ID	SMED30002489
Length (bp)	1737

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Apical junction component 1 homolog (SMED30002489) t-SNE clustered cells

Violin plots show distribution of expression levels for Apical junction component 1 homolog (SMED30002489) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Apical junction component 1 homolog (SMED30002489) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Apical junction component 1 homolog (SMED30002489) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30002489

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
pharynx	SMED30002489	h1SMcG0022632	dd_Smed_v4_11689_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
protonephridia	SMED30002489	h1SMcG0022632	dd_Smed_v4_11689_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30002489	h1SMcG0022632	dd_Smed_v4_11689_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Category 3 cell	SMED30002489	h1SMcG0022632	dd_Smed_v4_11689_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Apical junction component 1 homolog vs. Ensembl Human
Match: AJM1 (apical junction component 1 homolog [Source:HGNC Symbol;Acc:HGNC:37284])

HSP 1 Score: 142.895 bits (359), Expect = 4.437e-35
Identity = 95/282 (33.69%), Postives = 140/282 (49.65%), Query Frame = 1

Query:  682 FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMK----ARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSEL-----LNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            FKSCH C+TYYCS  CR++DW  HK   C  GR  S  + V++        H  FS + R G+L  GRG + L FPS   A+NF  FG   +  +P Y+ ++ +    +  L +    +  A  +Y+P +  ++S+S+AV          A P     S    V+K   ++L+       A+        P    L + P    + L        + R++ F++I R+L  RGV L+  +P +Y  L  FVE N+ F+PTTIYPTD  TGR F+CMI   SE
Sbjct:  683 FKSCHSCYTYYCSRLCRREDWDAHKAR-CVYGRVGSVCRHVLQFCRDSGPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYLSLRELATHAAP-LGSYARELAAAGRLYEPAECFLLSVSVAVGPGTAPPGTPALPAPAPRSHGPTVRKFAKVALA---AGSPARPPPARSREPDMETLILTPPPGTAGLDQDGEAGRRAREVAFIHIQRELRLRGVFLRHEFPRVYEQLCEFVEANRRFTPTTIYPTDRRTGRPFMCMIMAASE 959

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BLAST of Apical junction component 1 homolog vs. Ensembl Celegans
Match: ajm-1 (Apical junction molecule [Source:UniProtKB/Swiss-Prot;Acc:A0A1C3NSL9])

HSP 1 Score: 65.4698 bits (158), Expect = 1.011e-10
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 1

Query:  643 CQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFG----SSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVD 1104
            C     L  AR  F SC HC+TYYCS ECR  +W NH    C   R  +  K VI ++  D+      S + R G+   GRG + +   S   A+ + + G    S++ ++  +Y     +  LI++    SL A+   CN Y+P +  ++S+SI  D
Sbjct: 1668 CHRTRELSAARLFFVSCKHCYTYYCSRECRHNNWPNHSGR-CSFARINTLCKDVIMKVREDEQAQAFMSKVARDGFSVSGRGSVNIRLSSPQLAQAYVSNGWRALSAYPNDQLLYY--YTVKALIAERKEPSLIAL---CNRYEPREKFILSVSIIAD 1819

[Close]

BLAST of Apical junction component 1 homolog vs. Ensembl Celegans
Match: ajm-1 (Apical junction molecule [Source:UniProtKB/Swiss-Prot;Acc:A0A1C3NSL9])

HSP 1 Score: 65.0846 bits (157), Expect = 1.115e-10
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 1

Query:  643 CQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFG----SSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVD 1104
            C     L  AR  F SC HC+TYYCS ECR  +W NH    C   R  +  K VI ++  D+      S + R G+   GRG + +   S   A+ + + G    S++ ++  +Y     +  LI++    SL A+   CN Y+P +  ++S+SI  D
Sbjct: 1709 CHRTRELSAARLFFVSCKHCYTYYCSRECRHNNWPNHSGR-CSFARINTLCKDVIMKVREDEQAQAFMSKVARDGFSVSGRGSVNIRLSSPQLAQAYVSNGWRALSAYPNDQLLYY--YTVKALIAERKEPSLIAL---CNRYEPREKFILSVSIIAD 1860

[Close]

BLAST of Apical junction component 1 homolog vs. Ensembl Celegans
Match: ajm-1 (Apical junction molecule [Source:UniProtKB/Swiss-Prot;Acc:A0A1C3NSL9])

HSP 1 Score: 65.0846 bits (157), Expect = 1.115e-10
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 1

Query:  643 CQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFG----SSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVD 1104
            C     L  AR  F SC HC+TYYCS ECR  +W NH    C   R  +  K VI ++  D+      S + R G+   GRG + +   S   A+ + + G    S++ ++  +Y     +  LI++    SL A+   CN Y+P +  ++S+SI  D
Sbjct: 1709 CHRTRELSAARLFFVSCKHCYTYYCSRECRHNNWPNHSGR-CSFARINTLCKDVIMKVREDEQAQAFMSKVARDGFSVSGRGSVNIRLSSPQLAQAYVSNGWRALSAYPNDQLLYY--YTVKALIAERKEPSLIAL---CNRYEPREKFILSVSIIAD 1860

[Close]

BLAST of Apical junction component 1 homolog vs. Ensembl Celegans
Match: ajm-1 (Apical junction molecule [Source:UniProtKB/Swiss-Prot;Acc:A0A1C3NSL9])

HSP 1 Score: 63.5438 bits (153), Expect = 3.508e-10
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 1

Query:  643 CQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFG----SSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVD 1104
            C     L  AR  F SC HC+TYYCS ECR  +W NH    C   R  +  K VI ++  D+      S + R G+   GRG + +   S   A+ + + G    S++ ++  +Y     +  LI++    SL A+   CN Y+P +  ++S+SI  D
Sbjct:  981 CHRTRELSAARLFFVSCKHCYTYYCSRECRHNNWPNHSGR-CSFARINTLCKDVIMKVREDEQAQAFMSKVARDGFSVSGRGSVNIRLSSPQLAQAYVSNGWRALSAYPNDQLLYYYT--VKALIAERKEPSLIAL---CNRYEPREKFILSVSIIAD 1132

[Close]

BLAST of Apical junction component 1 homolog vs. Ensembl Celegans
Match: ajm-1 (Apical junction molecule [Source:UniProtKB/Swiss-Prot;Acc:A0A1C3NSL9])

HSP 1 Score: 63.1586 bits (152), Expect = 4.474e-10
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 1

Query:  643 CQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFG----SSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVD 1104
            C     L  AR  F SC HC+TYYCS ECR  +W NH    C   R  +  K VI ++  D+      S + R G+   GRG + +   S   A+ + + G    S++ ++  +Y     +  LI++    SL A+   CN Y+P +  ++S+SI  D
Sbjct: 1080 CHRTRELSAARLFFVSCKHCYTYYCSRECRHNNWPNHSGR-CSFARINTLCKDVIMKVREDEQAQAFMSKVARDGFSVSGRGSVNIRLSSPQLAQAYVSNGWRALSAYPNDQLLYYYT--VKALIAERKEPSLIAL---CNRYEPREKFILSVSIIAD 1231

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BLAST of Apical junction component 1 homolog vs. Ensembl Fly
Match: CG42748 (gene:FBgn0261802 transcript:FBtr0303276)

HSP 1 Score: 99.3673 bits (246), Expect = 1.951e-21
Identity = 89/305 (29.18%), Postives = 136/305 (44.59%), Query Frame = 1

Query:  628 CCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNI-HILISKFLPNSL-----SAVNEACNVYDPDKSMVISISIAV--DGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTS----------LLLTMLPNQSNSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVE-RNKEFSPTTIYPTDTSTGRAFVCMI 1485
            C    C       +A+K++KSCH+C   YCS ECR+  W  H+   C   RA +  + V+     D       S L R G L  GRG + + F S   AE F   G         + C+    ++     +P  +     S + +    Y P+  M+I ++I V  +   M   PV+        V +C  + L K  +  L +  A    +P S          L+LT  P Q       + +R+LI  NIL  L  RGV L K+YP ++  L  + E ++ +F+P T++P DT TG+ FVC+I
Sbjct:  444 CRNTKCDQSTSPSDAKKLYKSCHNCSHLYCSRECRRAHWEKHRKA-CLHSRASNICRQVLATCKDDIDSQRHLSLLARKGSLSQGRGVVRVLFRSAEAAEGFIKNG---------FQCMGEASYVRWPDLMPAEMGLELYSELLKLSTEYKPETKMLIYVAICVVSEAPGMGQAPVRWER---QLVSRCAKLKLCKTVLAELEQHQAA-LLQPVSVVAVPERTEILILTFNPGQ-------HSNRELILSNILDILSRRGVMLSKHYPEVFERLQTYSEGQSDKFNPVTLHPRDTQTGQNFVCII 727

[Close]

BLAST of Apical junction component 1 homolog vs. Ensembl Fly
Match: CG42748 (gene:FBgn0261802 transcript:FBtr0333744)

HSP 1 Score: 99.3673 bits (246), Expect = 2.067e-21
Identity = 89/305 (29.18%), Postives = 136/305 (44.59%), Query Frame = 1

Query:  628 CCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNI-HILISKFLPNSL-----SAVNEACNVYDPDKSMVISISIAV--DGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTS----------LLLTMLPNQSNSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVE-RNKEFSPTTIYPTDTSTGRAFVCMI 1485
            C    C       +A+K++KSCH+C   YCS ECR+  W  H+   C   RA +  + V+     D       S L R G L  GRG + + F S   AE F   G         + C+    ++     +P  +     S + +    Y P+  M+I ++I V  +   M   PV+        V +C  + L K  +  L +  A    +P S          L+LT  P Q       + +R+LI  NIL  L  RGV L K+YP ++  L  + E ++ +F+P T++P DT TG+ FVC+I
Sbjct:  488 CRNTKCDQSTSPSDAKKLYKSCHNCSHLYCSRECRRAHWEKHRKA-CLHSRASNICRQVLATCKDDIDSQRHLSLLARKGSLSQGRGVVRVLFRSAEAAEGFIKNG---------FQCMGEASYVRWPDLMPAEMGLELYSELLKLSTEYKPETKMLIYVAICVVSEAPGMGQAPVRWER---QLVSRCAKLKLCKTVLAELEQHQAA-LLQPVSVVAVPERTEILILTFNPGQ-------HSNRELILSNILDILSRRGVMLSKHYPEVFERLQTYSEGQSDKFNPVTLHPRDTQTGQNFVCII 771

[Close]

BLAST of Apical junction component 1 homolog vs. Ensembl Fly
Match: CG42748 (gene:FBgn0261802 transcript:FBtr0333743)

HSP 1 Score: 98.2117 bits (243), Expect = 7.064e-21
Identity = 89/305 (29.18%), Postives = 136/305 (44.59%), Query Frame = 1

Query:  628 CCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNI-HILISKFLPNSL-----SAVNEACNVYDPDKSMVISISIAV--DGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTS----------LLLTMLPNQSNSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVE-RNKEFSPTTIYPTDTSTGRAFVCMI 1485
            C    C       +A+K++KSCH+C   YCS ECR+  W  H+   C   RA +  + V+     D       S L R G L  GRG + + F S   AE F   G         + C+    ++     +P  +     S + +    Y P+  M+I ++I V  +   M   PV+        V +C  + L K  +  L +  A    +P S          L+LT  P Q       + +R+LI  NIL  L  RGV L K+YP ++  L  + E ++ +F+P T++P DT TG+ FVC+I
Sbjct: 1856 CRNTKCDQSTSPSDAKKLYKSCHNCSHLYCSRECRRAHWEKHRKA-CLHSRASNICRQVLATCKDDIDSQRHLSLLARKGSLSQGRGVVRVLFRSAEAAEGFIKNG---------FQCMGEASYVRWPDLMPAEMGLELYSELLKLSTEYKPETKMLIYVAICVVSEAPGMGQAPVRWER---QLVSRCAKLKLCKTVLAELEQHQAA-LLQPVSVVAVPERTEILILTFNPGQ-------HSNRELILSNILDILSRRGVMLSKHYPEVFERLQTYSEGQSDKFNPVTLHPRDTQTGQNFVCII 2139

[Close]

BLAST of Apical junction component 1 homolog vs. Ensembl Fly
Match: CG42748 (gene:FBgn0261802 transcript:FBtr0303277)

HSP 1 Score: 98.2117 bits (243), Expect = 7.875e-21
Identity = 89/305 (29.18%), Postives = 136/305 (44.59%), Query Frame = 1

Query:  628 CCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNI-HILISKFLPNSL-----SAVNEACNVYDPDKSMVISISIAV--DGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTS----------LLLTMLPNQSNSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVE-RNKEFSPTTIYPTDTSTGRAFVCMI 1485
            C    C       +A+K++KSCH+C   YCS ECR+  W  H+   C   RA +  + V+     D       S L R G L  GRG + + F S   AE F   G         + C+    ++     +P  +     S + +    Y P+  M+I ++I V  +   M   PV+        V +C  + L K  +  L +  A    +P S          L+LT  P Q       + +R+LI  NIL  L  RGV L K+YP ++  L  + E ++ +F+P T++P DT TG+ FVC+I
Sbjct: 1805 CRNTKCDQSTSPSDAKKLYKSCHNCSHLYCSRECRRAHWEKHRKA-CLHSRASNICRQVLATCKDDIDSQRHLSLLARKGSLSQGRGVVRVLFRSAEAAEGFIKNG---------FQCMGEASYVRWPDLMPAEMGLELYSELLKLSTEYKPETKMLIYVAICVVSEAPGMGQAPVRWER---QLVSRCAKLKLCKTVLAELEQHQAA-LLQPVSVVAVPERTEILILTFNPGQ-------HSNRELILSNILDILSRRGVMLSKHYPEVFERLQTYSEGQSDKFNPVTLHPRDTQTGQNFVCII 2088

[Close]

BLAST of Apical junction component 1 homolog vs. Ensembl Zebrafish
Match: unm_hu7912 (un-named hu7912 [Source:ZFIN;Acc:ZDB-GENE-120727-20])

HSP 1 Score: 146.747 bits (369), Expect = 1.949e-36
Identity = 102/276 (36.96%), Postives = 145/276 (52.54%), Query Frame = 1

Query:  682 FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSE---LLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            FKSCH C+TYYCS  CR++DW  HK   C  GR  S  + ++K    D   H  FS + R GYL  GRG + L FP+   A+NF   G   +  +P Y+ ++ +        P      N A   YDP +  ++++SIAV   + K    K++  T   V+K   +SL+    D   KK    +    +L+LT  P  S+ +       K R++ F+NI R+L +RGV L+  +P +Y  L  FVE NK F+PTTIYP D  TG+ F+CMI   SE
Sbjct:  784 FKSCHSCYTYYCSRNCRREDWDTHKEN-CLYGRISSVCRHILKHCREDLDIHKAFSRIARVGYLSRGRGVLFLGFPNPGCADNFLQVGLDSLTISPTYLSLRELDSFKDNLGPYCKELQN-AGKEYDPTECFLLNVSIAVGDLVPKLPSPKLQMPT---VRKYAKVSLASSSPD---KKIFKKECEMETLILTPPPGTSDIDKDGQEGRKAREICFINIQRELRTRGVFLRHEFPQIYNQLCEFVESNKRFTPTTIYPIDKRTGKQFMCMIMAASE 1051

[Close]

BLAST of Apical junction component 1 homolog vs. Ensembl Xenopus
Match: AJM1 (apical junction component 1 homolog [Source:NCBI gene;Acc:100495930])

HSP 1 Score: 149.443 bits (376), Expect = 3.224e-37
Identity = 104/294 (35.37%), Postives = 151/294 (51.36%), Query Frame = 1

Query:  628 CCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLP---NQSNSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            C    C+    +  A   FKSCH C+TYYCS  CR++DW  HK + C  GR  S  + V+K    +   H  FS + + GYL  GRG + L FP+   A+NF   G   +  +P Y+ ++ +    S  L      +  A N YDP++  ++++++AV G     R +  R   I  V+K   I+L+    +    K   D     +L+LT  P   N  N      K R++ F++I R+L  RGV L+  YP +Y+ L  FVE NK F+PTTIYP D  TG+ F+CMI   SE
Sbjct:  676 CSNAKCRRTETMFNACLYFKSCHSCYTYYCSRNCRREDWDTHKES-CIYGRMGSVCRHVLKFCRENTEVHKAFSRIAKVGYLSRGRGVLFLGFPNPGSADNFLQLGLEGLLMSPTYLSLRELESY-SDNLGEHAKELQVAGNQYDPEECFLLNVTVAV-GQGGSDR-LSARAHHIPTVRKYAKIALASSSPERKITKKEKDM---ETLILTPPPGTANLDNEGEEGRKAREVCFIHIQRELRMRGVFLRHEYPKIYQQLCEFVESNKRFTPTTIYPIDRRTGKQFMCMIMAASE 962

[Close]

BLAST of Apical junction component 1 homolog vs. Ensembl Mouse
Match: Ajm1 (apical junction component 1 [Source:MGI Symbol;Acc:MGI:2685842])

HSP 1 Score: 136.346 bits (342), Expect = 4.880e-33
Identity = 94/280 (33.57%), Postives = 140/280 (50.00%), Query Frame = 1

Query:  682 FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHA--VKKCVTISLS--KIFIDCLAKKSAFDQFRPTSLLLTMLPNQSN---SELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            FKSCH C+TYYCS  CR++DW  HK   C  GR  S  + V++        H  FS + R G+L  GRG + L FPS   A+NF  FG   +  +P Y+ ++ +    +  L +    +  A  +Y+P +  ++S+S+AV  S                  V+K   ++L+         A+    D     +L+LT  P  +          + R++ F++I R+L  RGV L+  +P +Y  L  FVE N+ F+PTTIYPTD  TGR F+CMI   SE
Sbjct:  683 FKSCHSCYTYYCSRLCRREDWDAHKAR-CVYGRVGSVCRHVLQFCRDSSPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYLSLRELATHAAP-LGSYARELAAAGRLYEPAECFLLSVSVAVGPSAAPPGAAARPAPRTPGPTVRKFAKVALAAGSPTRPPPARGGEPDM---ETLILTPPPGTAGLDEEGEAGRRAREVAFIHIQRELRMRGVFLRHEFPRVYEQLCEFVEANRRFTPTTIYPTDRRTGRPFMCMIMAASE 957

[Close]

Query:  682 FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHA--VKKCVTISLS--KIFIDCLAKKSAFDQFRPTSLLLTMLPNQSN---SELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            FKSCH C+TYYCS  CR++DW  HK   C  GR  S  + V++        H  FS + R G+L  GRG + L FPS   A+NF  FG   +  +P Y+ ++ +    +  L +    +  A  +Y+P +  ++S+S+AV  S                  V+K   ++L+         A+    D     +L+LT  P  +          + R++ F++I R+L  RGV L+  +P +Y  L  FVE N+ F+PTTIYPTD  TGR F+CMI   SE
Sbjct:  683 FKSCHSCYTYYCSRLCRREDWDAHKAR-CVYGRVGSVCRHVLQFCRDSSPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYLSLRELATHAAP-LGSYARELAAAGRLYEPAECFLLSVSVAVGPSAAPPGAAARPAPRTPGPTVRKFAKVALAAGSPTRPPPARGGEPDM---ETLILTPPPGTAGLDEEGEAGRRAREVAFIHIQRELRMRGVFLRHEFPRVYEQLCEFVEANRRFTPTTIYPTDRRTGRPFMCMIMAASE 957

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Query:  682 FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHA--VKKCVTISLS--KIFIDCLAKKSAFDQFRPTSLLLTMLPNQSN---SELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            FKSCH C+TYYCS  CR++DW  HK   C  GR  S  + V++        H  FS + R G+L  GRG + L FPS   A+NF  FG   +  +P Y+ ++ +    +  L +    +  A  +Y+P +  ++S+S+AV  S                  V+K   ++L+         A+    D     +L+LT  P  +          + R++ F++I R+L  RGV L+  +P +Y  L  FVE N+ F+PTTIYPTD  TGR F+CMI   SE
Sbjct:  683 FKSCHSCYTYYCSRLCRREDWDAHKAR-CVYGRVGSVCRHVLQFCRDSSPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYLSLRELATHAAP-LGSYARELAAAGRLYEPAECFLLSVSVAVGPSAAPPGAAARPAPRTPGPTVRKFAKVALAAGSPTRPPPARGGEPDM---ETLILTPPPGTAGLDEEGEAGRRAREVAFIHIQRELRMRGVFLRHEFPRVYEQLCEFVEANRRFTPTTIYPTDRRTGRPFMCMIMAASE 957

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BLAST of Apical junction component 1 homolog vs. UniProt/SwissProt
Match: sp|C9J069|AJM1_HUMAN (Apical junction component 1 homolog OS=Homo sapiens OX=9606 GN=AJM1 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.131e-34
Identity = 95/282 (33.69%), Postives = 140/282 (49.65%), Query Frame = 1

Query:  682 FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMK----ARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSEL-----LNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            FKSCH C+TYYCS  CR++DW  HK   C  GR  S  + V++        H  FS + R G+L  GRG + L FPS   A+NF  FG   +  +P Y+ ++ +    +  L +    +  A  +Y+P +  ++S+S+AV          A P     S    V+K   ++L+       A+        P    L + P    + L        + R++ F++I R+L  RGV L+  +P +Y  L  FVE N+ F+PTTIYPTD  TGR F+CMI   SE
Sbjct:  683 FKSCHSCYTYYCSRLCRREDWDAHKAR-CVYGRVGSVCRHVLQFCRDSGPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYLSLRELATHAAP-LGSYARELAAAGRLYEPAECFLLSVSVAVGPGTAPPGTPALPAPAPRSHGPTVRKFAKVALA---AGSPARPPPARSREPDMETLILTPPPGTAGLDQDGEAGRRAREVAFIHIQRELRLRGVFLRHEFPRVYEQLCEFVEANRRFTPTTIYPTDRRTGRPFMCMIMAASE 959

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BLAST of Apical junction component 1 homolog vs. UniProt/SwissProt
Match: sp|A2AJA9|AJM1_MOUSE (Apical junction component 1 homolog OS=Mus musculus OX=10090 GN=Ajm1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.414e-32
Identity = 94/280 (33.57%), Postives = 140/280 (50.00%), Query Frame = 1

Query:  682 FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHA--VKKCVTISLS--KIFIDCLAKKSAFDQFRPTSLLLTMLPNQSN---SELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            FKSCH C+TYYCS  CR++DW  HK   C  GR  S  + V++        H  FS + R G+L  GRG + L FPS   A+NF  FG   +  +P Y+ ++ +    +  L +    +  A  +Y+P +  ++S+S+AV  S                  V+K   ++L+         A+    D     +L+LT  P  +          + R++ F++I R+L  RGV L+  +P +Y  L  FVE N+ F+PTTIYPTD  TGR F+CMI   SE
Sbjct:  683 FKSCHSCYTYYCSRLCRREDWDAHKAR-CVYGRVGSVCRHVLQFCRDSSPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYLSLRELATHAAP-LGSYARELAAAGRLYEPAECFLLSVSVAVGPSAAPPGAAARPAPRTPGPTVRKFAKVALAAGSPTRPPPARGGEPDM---ETLILTPPPGTAGLDEEGEAGRRAREVAFIHIQRELRMRGVFLRHEFPRVYEQLCEFVEANRRFTPTTIYPTDRRTGRPFMCMIMAASE 957

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BLAST of Apical junction component 1 homolog vs. UniProt/SwissProt
Match: sp|A0A1C3NSL9|AJM1_CAEEL (Apical junction molecule OS=Caenorhabditis elegans OX=6239 GN=ajm-1 PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.591e-8
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 1

Query:  643 CQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFG----SSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVD 1104
            C     L  AR  F SC HC+TYYCS ECR  +W NH    C   R  +  K VI ++  D+      S + R G+   GRG + +   S   A+ + + G    S++ ++  +Y     +  LI++    SL A+   CN Y+P +  ++S+SI  D
Sbjct: 1448 CHRTRELSAARLFFVSCKHCYTYYCSRECRHNNWPNHSGR-CSFARINTLCKDVIMKVREDEQAQAFMSKVARDGFSVSGRGSVNIRLSSPQLAQAYVSNGWRALSAYPNDQLLYYYT--VKALIAERKEPSLIAL---CNRYEPREKFILSVSIIAD 1599

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BLAST of Apical junction component 1 homolog vs. TrEMBL
Match: C3ZTC4 (Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_68798 PE=4 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 4.778e-45
Identity = 98/298 (32.89%), Postives = 164/298 (55.03%), Query Frame = 1

Query:  613 MIMACCCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPN--QSNSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            ++   C +  C+    L EA++ +KSCH+C+TYYCS +CR+  W  HK   C   +  SA K +++   +++     FS + R GYL  GRG ++L FP+  DA++F   G   +   P Y   + +  + ++        +      YDPD  MV+ +S+AVD + +KA  V  R      +++C  I LS+  I    ++   D+    +++LT  P   +  +++ + + R++ F+NI R L +RGV L+  YP +YR L  +VE+N+ F P TIYP DT+TG+ F+C+I P S+
Sbjct:   61 LVTVRCSYSKCKRAAELKEAKQSYKSCHNCYTYYCSRDCRKNHWERHKRK-CVFSQINSACKHILQHARTNEEVQKCFSRVARTGYLSRGRGAVMLSFPTLQDAQDFLNSGLPSLPTLPGYKTFRELESVQTEPKDPHTETLITMVTTYDPDVKMVVDVSVAVDTTNVKANLVPRREGP--NIRQCAKIRLSERHIVKKTREEPADEIEAETMILTSPPGSPEKMAQISDRRSREICFINIQRNLRARGVILRHQYPDVYRKLCVYVEKNESFPPVTIYPRDTNTGKTFMCLIMPDSD 355

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BLAST of Apical junction component 1 homolog vs. TrEMBL
Match: Q4T1V6 (Chromosome undetermined SCAF10466, whole genome shotgun sequence OS=Tetraodon nigroviridis OX=99883 GN=GSTENG00008624001 PE=4 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.856e-38
Identity = 108/305 (35.41%), Postives = 159/305 (52.13%), Query Frame = 1

Query:  595 VDDRIGMIMACCCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSELLN---YKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
             DD   M+   C    C+    +  A   FKSCH C+T+YCS  CR+ DW NHK T C  GR  S  + ++K    +   H +FS L + GYL  GRG + L F +   A NF   G   +  +P Y+ ++ +   +   L      +  A N YDP++  ++++S+AV G L+  RP +++  T+    K V+++ S      L K S  +     +L+LT  P   + +       K R++ FVNI R+L +RGV L+  YP +Y  L  FVE NK F+PTTIYP D  TG+ F+CMI   SE
Sbjct:  104 TDDDDTMV---CANKKCKRTENMFNACLYFKSCHSCYTFYCSRNCRRDDWENHKET-CLYGRVNSVCRHILKYCRENSEIHKSFSRLAKAGYLSRGRGILFLGFANPETAVNFMQVGLESLLMSPTYLSLRELES-VKDNLGEYCKELQLAGNEYDPNECFLLNVSVAV-GELVPNRPPRVQAPTVRKYAK-VSLASSSPDKKVLKKDSEME-----TLILTPPPGTPDIDKEGEEGRKAREVCFVNIQRELRTRGVFLRHEYPKIYSRLCEFVESNKRFTPTTIYPIDKRTGKQFMCMIMAASE 396

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BLAST of Apical junction component 1 homolog vs. TrEMBL
Match: A0A4Z2BCT0 (Uncharacterized protein OS=Takifugu bimaculatus OX=433685 GN=fugu_004468 PE=4 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 8.667e-38
Identity = 109/305 (35.74%), Postives = 158/305 (51.80%), Query Frame = 1

Query:  595 VDDRIGMIMACCCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSELLN---YKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
             DD   M+   C    C+    +  A   FKSCH C+T+YCS  CR+ DW NHK T C  GR  S  + V+K    +   H +FS L + GYL  GRG + L F +   A NF   G   +  +P Y+ ++ +   +   L      +  A N YDP +  ++++S+AV G L+  RP +++  T+    K V+++ S      L K S  +     +L+LT  P   + +       K R++ FVNI R+L +RGV L+  YP +Y  L  FVE NK F+PTTIYP D  TG+ F+CMI   SE
Sbjct:  104 TDDDDTMV---CANKRCKRTENMFNACLYFKSCHSCYTFYCSRNCRRDDWENHKET-CLYGRVNSVCRHVLKYCRENSEIHKSFSRLAKAGYLSRGRGILFLGFANPETAVNFMQVGLESLLMSPTYLSLRELDS-VKDNLGEYCKELQLAGNEYDPHECFLLNVSVAV-GELVPNRPPRVQAPTVRKYAK-VSLASSSPDKKVLKKDSEME-----TLILTPPPGTPDIDKEGEEGRKAREVCFVNIQRELRTRGVFLRHEYPKIYSRLCEFVESNKRFTPTTIYPIDKRTGKQFMCMIMAASE 396

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BLAST of Apical junction component 1 homolog vs. TrEMBL
Match: G5BEI0 (Uncharacterized protein OS=Heterocephalus glaber OX=10181 GN=GW7_13118 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.011e-37
Identity = 94/278 (33.81%), Postives = 141/278 (50.72%), Query Frame = 1

Query:  682 FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSEL-----LNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            FKSCH C+TYYCS  CR++DW  HK   C  GR  S  + V++        H  FS + R G+L  GRG + L FPS   A+NF  FG   +  +P Y+ ++ +    +  L +    +  A  +Y+P +  ++S+S+AV      ++P     S    V+K   ++L+       A+        P    L + P    + L        + R++ F++I R+L  RGV L+  +P +Y  L  FVE N+ F+PTTIYPTD  TGR F+CMI   SE
Sbjct:    8 FKSCHSCYTYYCSRLCRREDWDAHKAR-CVYGRVGSVCRHVLQFCRDSGPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYLSLRELATHAAP-LGSYARELAAAGRLYEPAECFLLSVSVAVGPGTGASQPAPAPRSPGPTVRKFAKVALAA---GSPARPPPARTREPDMETLILTPPPGTAGLDQEGEAGRRAREVAFIHIQRELRLRGVFLRHEFPRVYEQLCEFVEANRRFTPTTIYPTDRRTGRPFMCMIMAASE 280

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BLAST of Apical junction component 1 homolog vs. TrEMBL
Match: A0A091VNR4 (Uncharacterized protein C9orf172 OS=Nipponia nippon OX=128390 GN=Y956_06065 PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.705e-37
Identity = 101/289 (34.95%), Postives = 151/289 (52.25%), Query Frame = 1

Query:  643 CQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSN---SELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            C+   PL      FKSCH C+TYYCS  CR++DW  HK + C  GR  S  + V++    +   H  FS + + GYL  GRG + L FP+   AENF  FG   +  +P Y+ ++ +    S  L      + E  N YDPD+  ++++++AV   + +    K++  T+    K V ++ S      L K+   +     +L+LT  P  ++         K R++ F+NI R+L  RGV L+  +P +Y  L  FVE NK F+PTTIYP D  TG+ F+CMI   SE
Sbjct:  176 CRRTEPLFTPCLYFKSCHSCYTYYCSRHCRREDWDTHKES-CVYGRVGSVCRHVLQFCRENAEVHKAFSRIAKVGYLSRGRGVLFLGFPNAGSAENFLQFGLESLLMSPTYLSLRELESY-SDNLGEYARELRETGNQYDPDECFLLNVTVAVTQKVPERPSPKMQVPTVRKYAK-VALASSSPEKKILKKERDME-----TLILTPPPGTADIDKEGEEGRKAREVCFINIQRELRIRGVFLRHEFPAVYEQLCDFVESNKRFTPTTIYPIDKRTGKQFMCMIMAASE 456

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BLAST of Apical junction component 1 homolog vs. Ensembl Cavefish
Match: ENSAMXT00000025612.2 (apical junction component 1 homolog [Source:NCBI gene;Acc:103038999])

HSP 1 Score: 145.591 bits (366), Expect = 4.021e-36
Identity = 96/276 (34.78%), Postives = 145/276 (52.54%), Query Frame = 1

Query:  682 FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSELLN---YKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            FKSCH C+TYYCS  CR++DW  HK + C  GR  S  + +IK        H  FS + + GYL  GRG + L FP+   + NF  FG   +  +P Y+ ++ +       L      + EA   YDP++  ++++SIAV   +      +++  T   V+K   ++L+    +    K   D     +L+LT  P  ++ +       K R++ F+NI R+L  RGV L+  YP +Y+ L  FVE N+ F+PTTIYP D  TG+ F+CMI   SE
Sbjct:  809 FKSCHSCYTYYCSRNCRREDWDIHKES-CLYGRTGSVCRHIIKYCRETAEVHKAFSRIAKVGYLSRGRGVLFLGFPNPGSSTNFLHFGLESLLMSPTYLSLRELDGFRDN-LGEYCKELQEAGKEYDPNECFLLNVSIAVGDQVPDGPSPRVQAPT---VRKYAKVALASYSPERKVHKKESDM---ETLILTPPPGTADIDKEGEEGRKAREICFINIQRELRIRGVFLRHEYPQVYQKLCEFVESNRRFTPTTIYPIDKRTGKQFMCMIMAASE 1076

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BLAST of Apical junction component 1 homolog vs. Ensembl Cavefish
Match: unm_hu7912 (uncharacterized protein C9orf172 homolog [Source:NCBI gene;Acc:103031368])

HSP 1 Score: 139.043 bits (349), Expect = 4.234e-34
Identity = 99/305 (32.46%), Postives = 150/305 (49.18%), Query Frame = 1

Query:  595 VDDRIGMIMACCCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQS---NSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            VD+   M+   C    CQ    L  A   FKSCH C TYYCS  CR+ DW  HK + C  GR  S  + +++    +   H+ FS + + GYL  GRG + + F +   A  F   G   +  +P Y+ ++ +     + L      + +A   YDP++  ++++SIA+  S+        + +T   V+K   +SL     D    K   D     +L+LT  P  S          K R++ F+NI ++L  RGV L+  +P++Y  L  FVE NK F+PTTIYP D  +G+ F+CMI   SE
Sbjct:  728 VDEHGSMV---CSNKKCQRVETLFNASLYFKSCHSCHTYYCSRNCRRDDWDTHKGS-CMYGRVSSVCRQILRHCRENSEIHSAFSRIAKVGYLSRGRGILFIGFQNPDSASTFLKVGLKSIITSPTYLSLRELDSF-KENLGEYCKELQDAGKQYDPNECFLLNVSIAISDSVPNRTSPSSQATT---VRKYAKVSLVSTSPDKKVLKKENDM---ETLILTPPPGTSAIDKEGPEGRKAREICFINIQKELRMRGVFLRHEFPHIYNQLCEFVENNKRFTPTTIYPIDKRSGKQFMCMIMAASE 1021

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BLAST of Apical junction component 1 homolog vs. Ensembl Nematostella
Match: EDO38896 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBM3])

HSP 1 Score: 54.6842 bits (130), Expect = 4.789e-8
Identity = 60/209 (28.71%), Postives = 95/209 (45.45%), Query Frame = 1

Query:  643 CQSQMPLVEARKV-FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMD---NNPVYVCIKNIH--ILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIF-IDCLAKKSAFDQFRPTS 1248
            CQ +  L+   ++ FKSC  CFT+YCS ECR   W  H++  C  G     +  ++    +    H   S + R  Y R GRG ++L F S   AE F   G+   +   N P Y  ++ I    + SK+    L AV      Y P    VI+++I V G  ++  PV    + + AV + + + L   F    L+ +++ +   P S
Sbjct:  120 CQKKEELLGIVELTFKSCKACFTHYCSPECRILHWPEHRLD-CQYGNIECQMVEILNLCQTSPKVHFFLSEITRKNYTRKGRGALMLIFLSPTSAELFVKSGTEFFNDRRNTPSYSSMREIKNAGVHSKYQKELLEAVGN----YSPIHEFVINVAIVV-GRTIQTTPVP--RNKVAAVIRHIKVPLHPEFNSRTLSPQNSQEHMSPVS 320

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BLAST of Apical junction component 1 homolog vs. Ensembl Medaka
Match: unm_hu7912 (uncharacterized protein C9orf172 homolog [Source:NCBI gene;Acc:101164067])

HSP 1 Score: 142.895 bits (359), Expect = 2.472e-35
Identity = 99/277 (35.74%), Postives = 147/277 (53.07%), Query Frame = 1

Query:  682 FKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARP-VKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSELLN---YKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            FKSCH C+T+YCS  CR+ DW  HK T C  GR  S  +  +K    +   H  FS L + GYL  GRG + L F +   A++F   G   +  +P Y+ ++ +       L      + +A   YDP++  ++++SIAV G L+  RP  +++  T+    K V+++ S      L K +  +     +L+LT  P   + +       K R++ FVNI R+L +RGV L+  YP +Y  L  FVE NK F+PTTIYP D  TG+ F+CMI   SE
Sbjct:  685 FKSCHSCYTFYCSRNCRRDDWETHKET-CLYGRVSSVCRHTLKFCRENSEIHKAFSRLAKAGYLSRGRGVLFLGFANPETADHFLQVGLESLLISPTYLSLRELDGFRDN-LGEYCKELQQAGKEYDPNECFLLNVSIAV-GELVPNRPSPRLQAPTVRKYAK-VSLASSSPDKKVLKKDAEME-----TLILTPPPGTPDIDKEGEEGRKAREVCFVNIQRELRTRGVFLRHEYPKIYNQLCEFVETNKRFTPTTIYPIDKRTGKQFMCMIMAASE 952

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BLAST of Apical junction component 1 homolog vs. Ensembl Medaka
Match: ENSORLT00000030704.1 (uncharacterized protein C9orf172-like [Source:NCBI gene;Acc:101158621])

HSP 1 Score: 142.51 bits (358), Expect = 3.232e-35
Identity = 99/294 (33.67%), Postives = 149/294 (50.68%), Query Frame = 1

Query:  628 CCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSELLN---YKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            C    C+    L  A   FKSCH C+TYYCS  CR++DW  HK + C  GR  S  + +IK        H  FS + + GYL  GRG + L FP+   +  F   G   +  +P Y+ ++ +     + L      + EA   YDP++  ++++SIAV   L      + +  T   V+K   ++L+    +    K   D     +L+LT  P  ++ +      +K R++ F+NI R+L  RGV L+  YP +Y+ L  FVE N+ F+PTTIYP D  TG+ F+CMI   SE
Sbjct:  790 CSNNKCRRTETLFNACLYFKSCHSCYTYYCSRNCRREDWDIHKES-CLYGRIGSTCRHIIKHCRETVEVHKAFSRIAKVGYLSRGRGVLFLGFPNPASSNKFMKCGLDSLLMSPTYLSLRELESF-RENLGEYCKELQEAGKEYDPNECFILNVSIAVGDQLPDGPSPRNQAPT---VRKYAKVALASFSPERKVHKKESDM---ETLILTPPPGTADIDKEGEEGHKAREICFINIQRELRIRGVFLRHEYPLVYQQLCEFVENNRRFTPTTIYPIDKRTGKQFMCMIMAASE 1075

[Close]

BLAST of Apical junction component 1 homolog vs. Planmine SMEST
Match: SMESG000037093.1 (SMESG000037093.1)

HSP 1 Score: 875.544 bits (2261), Expect = 0.000e+0
Identity = 464/468 (99.15%), Postives = 465/468 (99.36%), Query Frame = 1

Query:  214 MHLSNTXXXXXXXXXXXXXCRQSASHRDSGISLLNPTFCERTEEFHNYRPIEEVIKALLSYSVPQSSANSWSGTKXXXXXXXXXXXXHLACLFDSHNIAHLGKNQNVMRDFIEDRGVSNIANYQGLLVDDRIGMIMACCCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSESIDFPNRNQDVASSRSSVGSFMAELDALTSNWEKCDITD 1617
            MHLSNTKDDLKKLDNENDECRQSASH DSGISLLNPTFCERTEE HNYRPIEEVIKALLSYSVPQSSANSWSGTKSNDSNNSETSSNHLACLFDSHNIAHLGKN+NVMRDFIEDRGVSNIANYQGLLVDDRIGMIMACCCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNLGRGGYLRMGRGCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSESI FPNRNQDVASSRSSVGSFMAELDALTSNWEKCDITD
Sbjct:    1 MHLSNTKDDLKKLDNENDECRQSASHHDSGISLLNPTFCERTEELHNYRPIEEVIKALLSYSVPQSSANSWSGTKSNDSNNSETSSNHLACLFDSHNIAHLGKNKNVMRDFIEDRGVSNIANYQGLLVDDRIGMIMACCCFITCQSQMPLVEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNLGRGGYLRMGRGCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSESIIFPNRNQDVASSRSSVGSFMAELDALTSNWEKCDITD 468

[Close]

BLAST of Apical junction component 1 homolog vs. Planmine SMEST
Match: SMESG000006486.1 (SMESG000006486.1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.275e-7
Identity = 71/295 (24.07%), Postives = 122/295 (41.36%), Query Frame = 1

Query:  628 CCFITCQSQMPLVEARKVFK---SCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSELLN-YKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            C F  C  +  +++  K+ +   SC++CFTYYCS +CR  D+ +H  T+C   R    L  V   L   +      S      Y R G G +++ F SC  A++F     + + + P Y   K+I   I  F        NE C V     ++VIS ++ +  S+ +  P   R+S                       KS F  F   +++L  L  Q + + L  ++ R+  +  +      + V+LK+++P L+  L  ++    +F   T+   D        C +  Q E
Sbjct:  683 CNFKNCNRE--ILQFNKIDRGNCSCYNCFTYYCSKKCRNYDFPSH-FTMCSFNRINKMLIKVKNSLT--ELQLTAVSKCALENYFRSGEGTVIIAFESCRSADDFLNGQLNRLISQPHYFTKKDITKNIPSFKIMEYDGQNE-CVV-----TLVISATLPM-TSVEQCYPT-FRYSF----------------------KSKFVNFDCKNIVLQNLSIQQDKQALETFETRKKFYEYVTNFFRLKNVNLKQSHPVLFSKLGKYLNAGLQFESLTVLIKDPILNTTIACTVNLQKE 942

[Close]

BLAST of Apical junction component 1 homolog vs. Planmine SMEST
Match: SMESG000006486.1 (SMESG000006486.1)

HSP 1 Score: 53.5286 bits (127), Expect = 3.674e-7
Identity = 71/295 (24.07%), Postives = 122/295 (41.36%), Query Frame = 1

Query:  628 CCFITCQSQMPLVEARKVFK---SCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKRLLSDDTDHNTFSNXXXXXXXXXXXXCIVLWFPSCLDAENFATFGSSHMDNNPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSLMKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTMLPNQSNSELLN-YKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVERNKEFSPTTIYPTDTSTGRAFVCMIAPQSE 1500
            C F  C  +  +++  K+ +   SC++CFTYYCS +CR  D+ +H  T+C   R    L  V   L   +      S      Y R G G +++ F SC  A++F     + + + P Y   K+I   I  F        NE C V     ++VIS ++ +  S+ +  P   R+S                       KS F  F   +++L  L  Q + + L  ++ R+  +  +      + V+LK+++P L+  L  ++    +F   T+   D        C +  Q E
Sbjct:  697 CNFKNCNRE--ILQFNKIDRGNCSCYNCFTYYCSKKCRNYDFPSH-FTMCSFNRINKMLIKVKNSLT--ELQLTAVSKCALENYFRSGEGTVIIAFESCRSADDFLNGQLNRLISQPHYFTKKDITKNIPSFKIMEYDGQNE-CVV-----TLVISATLPM-TSVEQCYPT-FRYSF----------------------KSKFVNFDCKNIVLQNLSIQQDKQALETFETRKKFYEYVTNFFRLKNVNLKQSHPVLFSKLGKYLNAGLQFESLTVLIKDPILNTTIACTVNLQKE 956

The following BLAST results are available for this feature:

BLAST of Apical junction component 1 homolog vs. Ensembl Human
BLAST of Apical junction component 1 homolog vs. Ensembl Celegans
BLAST of Apical junction component 1 homolog vs. Ensembl Fly
BLAST of Apical junction component 1 homolog vs. Ensembl Zebrafish
BLAST of Apical junction component 1 homolog vs. Ensembl Xenopus
BLAST of Apical junction component 1 homolog vs. Ensembl Mouse
BLAST of Apical junction component 1 homolog vs. UniProt/SwissProt
BLAST of Apical junction component 1 homolog vs. TrEMBL
BLAST of Apical junction component 1 homolog vs. Ensembl Cavefish
BLAST of Apical junction component 1 homolog vs. Ensembl Sea Lamprey
BLAST of Apical junction component 1 homolog vs. Ensembl Yeast
BLAST of Apical junction component 1 homolog vs. Ensembl Nematostella
BLAST of Apical junction component 1 homolog vs. Ensembl Medaka
BLAST of Apical junction component 1 homolog vs. Planmine SMEST

BLAST of Apical junction component 1 homolog vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 1


Match Name	E-value	Identity	Description
AJM1	4.437e-35	33.69	apical junction component 1 homolog [Source:HGNC S...	[more]

BLAST of Apical junction component 1 homolog vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ajm-1	1.011e-10	31.65	Apical junction molecule [Source:UniProtKB/Swiss-...	[more]
ajm-1	1.115e-10	31.65	Apical junction molecule [Source:UniProtKB/Swiss-...	[more]
ajm-1	1.115e-10	31.65	Apical junction molecule [Source:UniProtKB/Swiss-...	[more]
ajm-1	3.508e-10	31.65	Apical junction molecule [Source:UniProtKB/Swiss-...	[more]
ajm-1	4.474e-10	31.65	Apical junction molecule [Source:UniProtKB/Swiss-...	[more]

BLAST of Apical junction component 1 homolog vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 4


Match Name	E-value	Identity	Description
CG42748	1.951e-21	29.18	gene:FBgn0261802 transcript:FBtr0303276	[more]
CG42748	2.067e-21	29.18	gene:FBgn0261802 transcript:FBtr0333744	[more]
CG42748	7.064e-21	29.18	gene:FBgn0261802 transcript:FBtr0333743	[more]
CG42748	7.875e-21	29.18	gene:FBgn0261802 transcript:FBtr0303277	[more]

BLAST of Apical junction component 1 homolog vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1


Match Name	E-value	Identity	Description
unm_hu7912	1.949e-36	36.96	un-named hu7912 [Source:ZFIN;Acc:ZDB-GENE-120727-2...	[more]

BLAST of Apical junction component 1 homolog vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1


Match Name	E-value	Identity	Description
AJM1	3.224e-37	35.37	apical junction component 1 homolog [Source:NCBI g...	[more]

BLAST of Apical junction component 1 homolog vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3


Match Name	E-value	Identity	Description
Ajm1	4.880e-33	33.57	apical junction component 1 [Source:MGI Symbol;Acc...	[more]
Ajm1	4.880e-33	33.57	apical junction component 1 [Source:MGI Symbol;Acc...	[more]
Ajm1	4.880e-33	33.57	apical junction component 1 [Source:MGI Symbol;Acc...	[more]

BLAST of Apical junction component 1 homolog vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 3


Match Name	E-value	Identity	Description
sp\|C9J069\|AJM1_HUMAN	2.131e-34	33.69	Apical junction component 1 homolog OS=Homo sapien...	[more]
sp\|A2AJA9\|AJM1_MOUSE	3.414e-32	33.57	Apical junction component 1 homolog OS=Mus musculu...	[more]
sp\|A0A1C3NSL9\|AJM1_CAEEL	1.591e-8	31.65	Apical junction molecule OS=Caenorhabditis elegans...	[more]

BLAST of Apical junction component 1 homolog vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
C3ZTC4	4.778e-45	32.89	Uncharacterized protein OS=Branchiostoma floridae ...	[more]
Q4T1V6	3.856e-38	35.41	Chromosome undetermined SCAF10466, whole genome sh...	[more]
A0A4Z2BCT0	8.667e-38	35.74	Uncharacterized protein OS=Takifugu bimaculatus OX...	[more]
G5BEI0	1.011e-37	33.81	Uncharacterized protein OS=Heterocephalus glaber O...	[more]
A0A091VNR4	1.705e-37	34.95	Uncharacterized protein C9orf172 OS=Nipponia nippo...	[more]

BLAST of Apical junction component 1 homolog vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
ENSAMXT00000025612.2	4.021e-36	34.78	apical junction component 1 homolog [Source:NCBI g...	[more]
unm_hu7912	4.234e-34	32.46	uncharacterized protein C9orf172 homolog [Source:N...	[more]

BLAST of Apical junction component 1 homolog vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Apical junction component 1 homolog vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Apical junction component 1 homolog vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO38896	4.789e-8	28.71	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Apical junction component 1 homolog vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2


Match Name	E-value	Identity	Description
unm_hu7912	2.472e-35	35.74	uncharacterized protein C9orf172 homolog [Source:N...	[more]
ENSORLT00000030704.1	3.232e-35	33.67	uncharacterized protein C9orf172-like [Source:NCBI...	[more]

BLAST of Apical junction component 1 homolog vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000037093.1	0.000e+0	99.15	SMESG000037093.1	[more]
SMESG000006486.1	3.275e-7	24.07	SMESG000006486.1	[more]
SMESG000006486.1	3.674e-7	24.07	SMESG000006486.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30002489 ID=SMED30002489|Name=Apical junction component 1 homolog|organism=Schmidtea mediterranea sexual|type=transcript|length=1737bp
CAATTACGAAAGTCAAAATCTTTGACAAATTGTATATGACAAGCTCGTGA
CCTTTACCCCTGTGACGAGCATTATGCTCACCGACACACGCATCGACACG
CTCATCAAATGTGCCAATGGTGTATCAGATTTCTCTGACATAGCACCATT
TCTGGAAATGCAACACCATTGTTTATTGATTAGCACAATTTATTCATCTG
ATCAATCTTACAAATGCATTTATCCAACACAAAGGACGACCTAAAGAAAC
TAGATAATGAAAATGATGAATGTAGACAATCTGCCAGTCATCGTGATTCT
GGAATCTCGTTATTAAATCCAACCTTTTGTGAGAGAACCGAAGAATTTCA
CAATTACAGGCCGATCGAAGAAGTTATCAAAGCATTACTATCATATTCCG
TGCCACAATCCTCTGCCAATTCATGGAGCGGAACAAAATCGAATGATTCC
AATAATTCCGAAACTTCCTCGAATCACTTGGCATGCCTATTTGATAGCCA
TAACATTGCTCATTTAGGGAAAAACCAAAATGTAATGCGCGATTTCATTG
AAGATCGAGGGGTAAGCAACATAGCGAATTATCAAGGATTGCTAGTGGAT
GACAGAATCGGAATGATTATGGCCTGCTGCTGCTTTATCACTTGCCAGTC
ACAAATGCCTCTTGTTGAAGCTAGAAAAGTATTCAAATCGTGCCATCATT
GTTTCACATACTATTGCAGTGCTGAATGTCGACAACAAGATTGGTCCAAC
CACAAAATGACAATCTGCCCCATCGGTAGGGCCGTCAGTGCCTTGAAAGC
GGTAATTAAAAGACTGCTATCTGATGACACTGATCATAATACATTTTCGA
ATTTGGGACGAGGGGGATATCTAAGGATGGGCAGAGGTTGTATTGTGTTA
TGGTTTCCAAGTTGCCTGGACGCGGAGAACTTTGCAACATTTGGATCTAG
TCACATGGATAATAATCCAGTCTATGTTTGTATTAAAAATATCCACATCC
TCATATCCAAATTTCTCCCAAATTCATTGTCTGCAGTTAATGAAGCCTGC
AATGTATACGACCCAGACAAGAGCATGGTTATCAGTATCTCGATAGCTGT
CGATGGAAGTTTAATGAAAGCGCGTCCCGTAAAGATCCGACATTCCACAA
TTCATGCAGTCAAAAAATGCGTCACGATTTCTTTGTCAAAGATCTTCATC
GATTGTCTTGCAAAGAAAAGTGCATTTGATCAATTCCGACCTACCTCATT
ACTGCTGACAATGCTCCCAAATCAGAGCAATTCAGAATTGTTAAATTATA
AAGACAGGCAGTTAATTTTCGTAAATATTCTCAGACAACTGGAATCTCGG
GGGGTCGACCTGAAAAAGAATTATCCCTATTTGTACAGAAATCTCATCTA
TTTCGTTGAGAGAAACAAAGAATTTTCTCCCACTACAATTTATCCCACAG
ACACCTCGACAGGGAGGGCTTTTGTCTGCATGATTGCCCCACAAAGTGAG
TCCATTGATTTCCCAAATCGAAACCAAGATGTTGCTTCAAGTAGGTCATC
AGTTGGAAGTTTCATGGCAGAATTGGACGCCCTCACATCAAATTGGGAGA
AATGTGACATCACAGATCTCTAGCTGTTATAGTTTTATTTATATTTCACT
TCTTACTTTATTATTTGCAATTGCCTAGATTCGGTCGGCTCATTCAGAAA
GTCCTGGGTAAAAATATTTAATAAAAATAAAACTCAG

protein sequence of SMED30002489-orf-1

>SMED30002489-orf-1 ID=SMED30002489-orf-1|Name=SMED30002489-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=470bp
MHLSNTKDDLKKLDNENDECRQSASHRDSGISLLNPTFCERTEEFHNYRP
IEEVIKALLSYSVPQSSANSWSGTKSNDSNNSETSSNHLACLFDSHNIAH
LGKNQNVMRDFIEDRGVSNIANYQGLLVDDRIGMIMACCCFITCQSQMPL
VEARKVFKSCHHCFTYYCSAECRQQDWSNHKMTICPIGRAVSALKAVIKR
LLSDDTDHNTFSNLGRGGYLRMGRGCIVLWFPSCLDAENFATFGSSHMDN
NPVYVCIKNIHILISKFLPNSLSAVNEACNVYDPDKSMVISISIAVDGSL
MKARPVKIRHSTIHAVKKCVTISLSKIFIDCLAKKSAFDQFRPTSLLLTM
LPNQSNSELLNYKDRQLIFVNILRQLESRGVDLKKNYPYLYRNLIYFVER
NKEFSPTTIYPTDTSTGRAFVCMIAPQSESIDFPNRNQDVASSRSSVGSF
MAELDALTSNWEKCDITDL*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **biological process**
Term	Definition
GO:0045216	cell-cell junction organization

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000016	pharynx
PLANA:0000020	protonephridia
PLANA:0000026	gut
PLANA:0000035	Category 3 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR038825	Apical_junction

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..23
IPR038825	Apical junction component	PANTHER	PTHR21517	UNCHARACTERIZED	coord: 87..429

Main menu

Apical junction component 1 homolog

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Owlery

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