slc31a-1

Overview
Nameslc31a-1 (AKN21631.1)
Smed IDSMED30002486
Length (bp)651
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of slc31a-1 (SMED30002486) t-SNE clustered cells

Violin plots show distribution of expression levels for slc31a-1 (SMED30002486) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of slc31a-1 (SMED30002486) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for slc31a-1 (SMED30002486) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30002486

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
intestinal phagocyteSMED30002486SMESG000016698.1 Contig1777GPL15192PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30002486SMESG000005775.1 Contig1777GPL15192PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
protonephridiaSMED30002486SMESG000005775.1 dd_Smed_v4_1513_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30002486SMESG000005775.1 dd_Smed_v4_1513_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30002486SMESG000005775.1 dd_Smed_v4_1513_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30002486SMESG000005775.1 dd_Smed_v4_1513_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of slc31a-1 vs. Ensembl Human
Match: SLC31A1 (solute carrier family 31 member 1 [Source:HGNC Symbol;Acc:HGNC:11016])

HSP 1 Score: 77.0258 bits (188), Expect = 5.222e-17
Identity = 57/167 (34.13%), Postives = 86/167 (51.50%), Query Frame = 3 
Query:  120 NHTNG---SSMMMMKMYFNEDL-NFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLRE-------YHVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            +H++G   SSMMMM M F     N  LLF    I +  ++A A +  F+ A+ YE  K  RE         + Y    V   + ++L    K+V +++   S  + LQ+++H+IQ  +SYFLMLI M++N Y+ I+V AG   GYF   +  A+      D  EHC 
Sbjct:   30 SHSHGGGDSSMMMMPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQM--LSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVV----DITEHCH 190
[Close]
BLAST of slc31a-1 vs. Ensembl Human
Match: SLC31A2 (solute carrier family 31 member 2 [Source:HGNC Symbol;Acc:HGNC:11017])

HSP 1 Score: 54.299 bits (129), Expect = 5.376e-9
Identity = 41/134 (30.60%), Postives = 70/134 (52.24%), Query Frame = 3 
Query:  150 MKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYE-INLVANSSESLLRKS-----------VTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF 515
            M M+F       LLF  W + S + +A + +   + A+LYE  K  +   +N   +NL  + S+  + ++           V R    +   +F QSL+H+IQ  + YF+ML +MS+NT++F+ V+ G  VGY+
Sbjct:    1 MAMHFIFSDTAVLLFDFWSVHSPAGMALSVLVLLLLAVLYEGIKVGKAKLLNQVLVNLPTSISQQTIAETDGDSAGSDSFPVGRTHHRWYLCHFGQSLIHVIQVVIGYFIMLAVMSYNTWIFLGVVLGSAVGYY 134
[Close]
BLAST of slc31a-1 vs. Ensembl Celegans
Match: K12C11.6 (pep chromosome:WBcel235:I:1337012:1338216:1 gene:WBGene00045052.1 transcript:K12C11.6.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:K12C11.6)

HSP 1 Score: 60.4622 bits (145), Expect = 1.086e-11
Identity = 36/125 (28.80%), Postives = 66/125 (52.80%), Query Frame = 3 
Query:  150 MKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF-FG 521
            M M+F+      +LF  W +T    +   C    +  +L EL K LR     ++I     + + L+ +S   ++  FS  +  Q+++ ++Q + SY LML+ M+F+ ++ I+V+ GL +GY  FG
Sbjct:    9 MHMWFHTKTQDTVLFKTWNVTDTPTMVWVCCIIVVAGILLELIKFLR-----WKIEKWHKNRDELVSRSYISRL--FSPIHIGQTILFMVQLSFSYILMLLFMTFSVWLGIAVVVGLGIGYLAFG 126
[Close]
BLAST of slc31a-1 vs. Ensembl Celegans
Match: F58G6.3 (pep chromosome:WBcel235:IV:9653535:9654175:1 gene:WBGene00010274.1 transcript:F58G6.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F58G6.3)

HSP 1 Score: 57.3806 bits (137), Expect = 1.629e-10
Identity = 44/145 (30.34%), Postives = 68/145 (46.90%), Query Frame = 3 
Query:  105 MHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSR----ANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF-FGN 524
            M M MN         M M+F+      +LF  W ITS  K+  ACI   I  ++ E  K        Y   L+        R+S ++K    SR     +F Q+ +  +Q   SY LMLI M+F+ ++ ++V+ GL++G+  FG 
Sbjct:    6 MDMDMNQGP-----FMWMWFHTKPQDTVLFSTWNITSAGKMVWACILVAIAGIILEAIK--------YNRRLIQK------RQSPSKKESYISRLLSTMHFFQTFLFFVQLGFSYCLMLIFMTFSIWLGLAVVIGLSIGFLIFGG 131
[Close]
BLAST of slc31a-1 vs. Ensembl Celegans
Match: Y58A7A.1 (pep chromosome:WBcel235:V:5067637:5069665:-1 gene:WBGene00021975.1 transcript:Y58A7A.1b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y58A7A.1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.111e-10
Identity = 42/145 (28.97%), Postives = 68/145 (46.90%), Query Frame = 3 
Query:  126 TNGSSMMMMK--MYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYH-VNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYV-FISVIAGLTVGYFFGNAICALDHR 548
            T  S  MMM   M F+      +LF  W+  +   +A AC  + + A L E  +  R+Y     +++    S E  L++S         + + +  L+ L Q T++YFLMLI M+FN Y+ F +V+         G  +C L +R
Sbjct:   22 TKSSDHMMMNHAMSFHFGTEETILFDFWKTETAVGIAVACFITVLLAFLMETLRFFRDYRKAQTQLHQPPISPEDRLKRS--------PQLDLIDPLLQLFQLTIAYFLMLIFMTFNAYLCFFTVV---------GEVVCHLLYR 149
[Close]
BLAST of slc31a-1 vs. Ensembl Celegans
Match: K12C11.3 (pep chromosome:WBcel235:I:1335395:1336867:1 gene:WBGene00019674.1 transcript:K12C11.3a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:K12C11.3)

HSP 1 Score: 55.0694 bits (131), Expect = 1.118e-9
Identity = 37/135 (27.41%), Postives = 64/135 (47.41%), Query Frame = 3 
Query:  114 PMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFF 518
            PM  T       M  +++ +LN  +LF  W++   + +  +C        L E  K  +           A S +      V R+   ++R + +Q++ H  QT +++ LM I M+FN Y+ +S+  GLT+GYFF
Sbjct:   10 PMGKTTK-----MWQWYHVELNDVILFENWKVQDMTTMIWSCFVVGFAGFLLEFLKYSKW----------AASMQMRPAGDVDRRTKFWAR-HVVQAMYHFWQTLLAFILMNIYMTFNVYICLSLCLGLTIGYFF 128
[Close]
BLAST of slc31a-1 vs. Ensembl Celegans
Match: Y58A7A.1 (pep chromosome:WBcel235:V:5067637:5068615:-1 gene:WBGene00021975.1 transcript:Y58A7A.1a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y58A7A.1)

HSP 1 Score: 54.299 bits (129), Expect = 1.937e-9
Identity = 34/128 (26.56%), Postives = 59/128 (46.09%), Query Frame = 3 
Query:  186 LLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYH-VNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHC 566
            +LF  W+  +   +A AC  + + A L E  +  R+Y     +++    S E  L++S         + + +  L+ L Q T++YFLMLI M+FN Y+    + G  V +     +    +  S  HC
Sbjct:   11 ILFDFWKTETAVGIAVACFITVLLAFLMETLRFFRDYRKAQTQLHQPPISPEDRLKRS--------PQLDLIDPLLQLFQLTIAYFLMLIFMTFNAYLCFFTVVGEVVCHLLYRTLYPNLNSSSAGHC 130
[Close]
BLAST of slc31a-1 vs. Ensembl Fly
Match: Ctr1A (gene:FBgn0062413 transcript:FBtr0070951)

HSP 1 Score: 65.4698 bits (158), Expect = 9.108e-13
Identity = 46/158 (29.11%), Postives = 76/158 (48.10%), Query Frame = 3 
Query:  147 MMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTR--------------KVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            MM M F+   N  +LF  W I + + L  + I  F+ AL+YE  K  REY      NL+     +  +++                 +  + S  + LQ+L+H++Q T+S+ LMLI M++N ++ + V+ G  VGYF   +  ++      D  EHC 
Sbjct:   78 MMPMAFHFGYNETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLEYRPVTGPQRNPEAPRIPSPAAAAPSPVQPSMLSINHLLQTLLHVLQVTLSFLLMLIFMTYNVWLCLMVVLGAAVGYFLFCWKKSVIV----DVTEHCH 231
[Close]
BLAST of slc31a-1 vs. Ensembl Fly
Match: Ctr1A (gene:FBgn0062413 transcript:FBtr0308592)

HSP 1 Score: 65.4698 bits (158), Expect = 9.108e-13
Identity = 46/158 (29.11%), Postives = 76/158 (48.10%), Query Frame = 3 
Query:  147 MMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTR--------------KVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            MM M F+   N  +LF  W I + + L  + I  F+ AL+YE  K  REY      NL+     +  +++                 +  + S  + LQ+L+H++Q T+S+ LMLI M++N ++ + V+ G  VGYF   +  ++      D  EHC 
Sbjct:   78 MMPMAFHFGYNETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLEYRPVTGPQRNPEAPRIPSPAAAAPSPVQPSMLSINHLLQTLLHVLQVTLSFLLMLIFMTYNVWLCLMVVLGAAVGYFLFCWKKSVIV----DVTEHCH 231
[Close]
BLAST of slc31a-1 vs. Ensembl Fly
Match: Ctr1A (gene:FBgn0062413 transcript:FBtr0308593)

HSP 1 Score: 65.4698 bits (158), Expect = 1.195e-12
Identity = 49/168 (29.17%), Postives = 78/168 (46.43%), Query Frame = 3 
Query:  147 MMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKS----------------------VTRKVP--VFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            MM M F+   N  +LF  W I + + L  + I  F+ AL+YE  K  REY      NL+     +  +++                      V  K P  + S  + LQ+L+H++Q T+S+ LMLI M++N ++ + V+ G  VGYF   +  ++      D  EHC 
Sbjct:   78 MMPMAFHFGYNETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLEYRPVTGPQRNPEAPRIPSPAAAAPSPVQYVGEVVHKQPPSMLSINHLLQTLLHVLQVTLSFLLMLIFMTYNVWLCLMVVLGAAVGYFLFCWKKSVIV----DVTEHCH 241
[Close]
BLAST of slc31a-1 vs. Ensembl Fly
Match: Ctr1A (gene:FBgn0062413 transcript:FBtr0308594)

HSP 1 Score: 65.4698 bits (158), Expect = 1.195e-12
Identity = 49/168 (29.17%), Postives = 78/168 (46.43%), Query Frame = 3 
Query:  147 MMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKS----------------------VTRKVP--VFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            MM M F+   N  +LF  W I + + L  + I  F+ AL+YE  K  REY      NL+     +  +++                      V  K P  + S  + LQ+L+H++Q T+S+ LMLI M++N ++ + V+ G  VGYF   +  ++      D  EHC 
Sbjct:   78 MMPMAFHFGYNETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLEYRPVTGPQRNPEAPRIPSPAAAAPSPVQYVGEVVHKQPPSMLSINHLLQTLLHVLQVTLSFLLMLIFMTYNVWLCLMVVLGAAVGYFLFCWKKSVIV----DVTEHCH 241
[Close]
BLAST of slc31a-1 vs. Ensembl Fly
Match: Ctr1B (gene:FBgn0062412 transcript:FBtr0081835)

HSP 1 Score: 57.7658 bits (138), Expect = 2.734e-10
Identity = 42/160 (26.25%), Postives = 76/160 (47.50%), Query Frame = 3 
Query:   99 MDMHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVAN--------SSESLLRKSVTRKVPV------------FSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFF 518
            MD H   + T+ +    M M F+      +L+  W  ++ ++   + +  F+ + LYE  K LR+     E    +          +E+        + P+            F+ ++ +QSL++L+Q  +SY LMLI M+FN ++ ++VI GL +GYFF
Sbjct:    1 MD-HGSDDSTSTAKSCPMIMVFHAGHCERILWRGWVASTVTEFVLSALAIFLVSFLYEALKFLRQQLARREARRASEQLAAEQRRKNEAPAAGGCCSEAPLAEPREQTYWQRLFASSHIVQSLLNLLQIVISYLLMLIFMTFNYWLCLAVILGLGLGYFF 159
[Close]
BLAST of slc31a-1 vs. Ensembl Zebrafish
Match: slc31a1 (solute carrier family 31 member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3])

HSP 1 Score: 94.3597 bits (233), Expect = 1.049e-23
Identity = 64/162 (39.51%), Postives = 90/162 (55.56%), Query Frame = 3 
Query:  129 NGSSMMMMKM--YFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREY-------HVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            +G  MMMM+M  YF    N  LLF    I +  ++A ACIG F+ A+LYE  K  RE        +V Y    V  S  ++L    K+V +++   S A+FLQ+L+H+IQ  VSYFLML+ M++N Y+ I+V AG  +GYF   +  A+      D  EHC 
Sbjct:   34 HGDHMMMMQMTFYFGYK-NVELLFAGLVINTPGEMAGACIGVFLLAVLYEGLKIGREVLLRRNQVNVRYNSMPVPGSDGTVLMETHKTVGQRM--LSMAHFLQTLLHIIQVVVSYFLMLVFMTYNGYLCIAVAAGAGLGYFLFSWKKAVVV----DITEHCH 188
[Close]
BLAST of slc31a-1 vs. Ensembl Zebrafish
Match: slc31a1 (solute carrier family 31 member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3])

HSP 1 Score: 94.3597 bits (233), Expect = 1.049e-23
Identity = 64/162 (39.51%), Postives = 90/162 (55.56%), Query Frame = 3 
Query:  129 NGSSMMMMKM--YFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREY-------HVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            +G  MMMM+M  YF    N  LLF    I +  ++A ACIG F+ A+LYE  K  RE        +V Y    V  S  ++L    K+V +++   S A+FLQ+L+H+IQ  VSYFLML+ M++N Y+ I+V AG  +GYF   +  A+      D  EHC 
Sbjct:   34 HGDHMMMMQMTFYFGYK-NVELLFAGLVINTPGEMAGACIGVFLLAVLYEGLKIGREVLLRRNQVNVRYNSMPVPGSDGTVLMETHKTVGQRM--LSMAHFLQTLLHIIQVVVSYFLMLVFMTYNGYLCIAVAAGAGLGYFLFSWKKAVVV----DITEHCH 188
[Close]
BLAST of slc31a-1 vs. Ensembl Zebrafish
Match: slc31a1 (solute carrier family 31 member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3])

HSP 1 Score: 93.2041 bits (230), Expect = 2.696e-23
Identity = 64/162 (39.51%), Postives = 89/162 (54.94%), Query Frame = 3 
Query:  129 NGSSMMMMKM--YFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREY-------HVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            +G  MMMM+M  YF    N  LLF    I +  ++A ACIG F+ A+LYE  K  RE        +V Y    V  S  ++L    K+V  ++   S A+FLQ+L+H+IQ  VSYFLML+ M++N Y+ I+V AG  +GYF   +  A+      D  EHC 
Sbjct:   34 HGDHMMMMQMTFYFGYK-NVELLFAGLVINTPGEMAGACIGVFLLAVLYEGLKIGREVLLRRNQVNVRYNSMPVPGSDGTVLMETHKTVGSRM--LSMAHFLQTLLHIIQVVVSYFLMLVFMTYNGYLCIAVAAGAGLGYFLFSWKKAVVV----DITEHCH 188
[Close]
BLAST of slc31a-1 vs. Ensembl Zebrafish
Match: slc31a2 (solute carrier family 31 member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25])

HSP 1 Score: 48.521 bits (114), Expect = 6.676e-7
Identity = 19/40 (47.50%), Postives = 30/40 (75.00%), Query Frame = 3 
Query:  396 LQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF 515
            LQ+ +H++Q T+ Y LML +MS+N ++F+ VI G  +GYF
Sbjct:  123 LQTAIHIVQVTLGYMLMLCVMSYNIWIFLGVITGSVLGYF 162
[Close]
BLAST of slc31a-1 vs. Ensembl Mouse
Match: Slc31a1 (solute carrier family 31, member 1 [Source:MGI Symbol;Acc:MGI:1333843])

HSP 1 Score: 83.5741 bits (205), Expect = 1.310e-19
Identity = 57/164 (34.76%), Postives = 84/164 (51.22%), Query Frame = 3 
Query:  120 NHTNGSSMMMMKMYFNEDL-NFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLRE-------YHVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            +H  G SMMMM M F  D  N  LLF    I +  ++A A +  F+ A+ YE  K  RE         + Y    V   + ++L    K+V +++   S  + LQ+++H+IQ  +SYFLMLI M++N Y+ I+V AG   GYF   +  A+      D  EHC 
Sbjct:   39 SHGGGDSMMMMPMTFYFDFKNVNLLFSGLVINTPGEMAGAFVAVFLLAMFYEGLKIAREGLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQM--LSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVV----DITEHCH 196
[Close]
BLAST of slc31a-1 vs. Ensembl Mouse
Match: Slc31a2 (solute carrier family 31, member 2 [Source:MGI Symbol;Acc:MGI:1333844])

HSP 1 Score: 54.6842 bits (130), Expect = 3.302e-9
Identity = 42/134 (31.34%), Postives = 69/134 (51.49%), Query Frame = 3 
Query:  150 MKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFK--RLREYHVNYEINLVANSSESLL---RKSVTRKVPVFSRAN-------FLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF 515
            M M+F       LLF  W++ S + +A + +   + A+LYE  K  + +  H   E     NS + +L   + S   +    +R         F QSL+H+IQ  + YF+ML +MS+NT++F+ V+ G  VGY+
Sbjct:    1 MPMHFIFSDEAVLLFDFWRVHSPTGMALSVLVVLLLAVLYEGIKVGKAKLLHKTLESLPATNSQQFILGPDQDSTGSRSTSDNRTRLRWFLCYFGQSLVHVIQVVIGYFVMLAVMSYNTWIFLGVVLGSAVGYY 134
[Close]
BLAST of slc31a-1 vs. Ensembl Mouse
Match: Slc31a2 (solute carrier family 31, member 2 [Source:MGI Symbol;Acc:MGI:1333844])

HSP 1 Score: 53.5286 bits (127), Expect = 8.396e-9
Identity = 39/122 (31.97%), Postives = 65/122 (53.28%), Query Frame = 3 
Query:  186 LLFGAWQITSQSKLAAACIGSFICALLYELFK--RLREYHVNYEINLVANSSESLL---RKSVTRKVPVFSRAN-------FLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF 515
            LLF  W++ S + +A + +   + A+LYE  K  + +  H   E     NS + +L   + S   +    +R         F QSL+H+IQ  + YF+ML +MS+NT++F+ V+ G  VGY+
Sbjct:   11 LLFDFWRVHSPTGMALSVLVVLLLAVLYEGIKVGKAKLLHKTLESLPATNSQQFILGPDQDSTGSRSTSDNRTRLRWFLCYFGQSLVHVIQVVIGYFVMLAVMSYNTWIFLGVVLGSAVGYY 132
[Close]
BLAST of slc31a-1 vs. Ensembl Mouse
Match: Slc31a2 (solute carrier family 31, member 2 [Source:MGI Symbol;Acc:MGI:1333844])

HSP 1 Score: 53.5286 bits (127), Expect = 8.396e-9
Identity = 39/122 (31.97%), Postives = 65/122 (53.28%), Query Frame = 3 
Query:  186 LLFGAWQITSQSKLAAACIGSFICALLYELFK--RLREYHVNYEINLVANSSESLL---RKSVTRKVPVFSRAN-------FLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF 515
            LLF  W++ S + +A + +   + A+LYE  K  + +  H   E     NS + +L   + S   +    +R         F QSL+H+IQ  + YF+ML +MS+NT++F+ V+ G  VGY+
Sbjct:   11 LLFDFWRVHSPTGMALSVLVVLLLAVLYEGIKVGKAKLLHKTLESLPATNSQQFILGPDQDSTGSRSTSDNRTRLRWFLCYFGQSLVHVIQVVIGYFVMLAVMSYNTWIFLGVVLGSAVGYY 132
[Close]
BLAST of slc31a-1 vs. UniProt/SwissProt
Match: sp|Q8K211|COPT1_MOUSE (High affinity copper uptake protein 1 OS=Mus musculus OX=10090 GN=Slc31a1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.164e-19
Identity = 57/164 (34.76%), Postives = 84/164 (51.22%), Query Frame = 3 
Query:  120 NHTNGSSMMMMKMYFNEDL-NFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLRE-------YHVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            +H  G SMMMM M F  D  N  LLF    I +  ++A A +  F+ A+ YE  K  RE         + Y    V   + ++L    K+V +++   S  + LQ+++H+IQ  +SYFLMLI M++N Y+ I+V AG   GYF   +  A+      D  EHC 
Sbjct:   39 SHGGGDSMMMMPMTFYFDFKNVNLLFSGLVINTPGEMAGAFVAVFLLAMFYEGLKIAREGLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQM--LSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVV----DITEHCH 196
[Close]
BLAST of slc31a-1 vs. UniProt/SwissProt
Match: sp|O15431|COPT1_HUMAN (High affinity copper uptake protein 1 OS=Homo sapiens OX=9606 GN=SLC31A1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.508e-16
Identity = 57/167 (34.13%), Postives = 86/167 (51.50%), Query Frame = 3 
Query:  120 NHTNG---SSMMMMKMYFNEDL-NFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLRE-------YHVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            +H++G   SSMMMM M F     N  LLF    I +  ++A A +  F+ A+ YE  K  RE         + Y    V   + ++L    K+V +++   S  + LQ+++H+IQ  +SYFLMLI M++N Y+ I+V AG   GYF   +  A+      D  EHC 
Sbjct:   30 SHSHGGGDSSMMMMPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQM--LSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVV----DITEHCH 190
[Close]
BLAST of slc31a-1 vs. UniProt/SwissProt
Match: sp|Q5RAS6|COPT1_PONAB (High affinity copper uptake protein 1 OS=Pongo abelii OX=9601 GN=SLC31A1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.391e-16
Identity = 57/167 (34.13%), Postives = 85/167 (50.90%), Query Frame = 3 
Query:  120 NHTNG---SSMMMMKMYFNEDL-NFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLRE-------YHVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            +H+ G   SSMMMM M F     N  LLF    I +  ++A A +  F+ A+ YE  K  RE         + Y    V   + ++L    K+V +++   S  + LQ+++H+IQ  +SYFLMLI M++N Y+ I+V AG   GYF   +  A+      D  EHC 
Sbjct:   30 SHSRGGGDSSMMMMPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQM--LSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVV----DITEHCH 190
[Close]
BLAST of slc31a-1 vs. UniProt/SwissProt
Match: sp|Q9JK41|COPT1_RAT (High affinity copper uptake protein 1 OS=Rattus norvegicus OX=10116 GN=Slc31a1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.610e-15
Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = 3 
Query:  108 HMPMNHTNG----------------SSMMMMKMYFNEDL-NFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLRE-------YHVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            HM MNHT+                 S  MMM M F     N  LLF +  I +  ++A A +  F+ A+ YE  K  RE         + Y    V   + ++L    K+V +++   S  + LQ+++H+IQ  +SYFLMLI M++N Y+ I+V AG   GYF   +  A+      D  EHC 
Sbjct:   10 HMGMNHTDDNITMPPHQHPTTSASHSHEMMMPMTFYFGFKNVDLLFSSLVINTPGEMAGAFVAVFLLAMFYEGLKIAREGLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQM--LSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVV----DITEHCH 187
[Close]
BLAST of slc31a-1 vs. UniProt/SwissProt
Match: sp|Q8WNR0|COPT1_PIG (High affinity copper uptake protein 1 OS=Sus scrofa OX=9823 GN=SLC31A1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.957e-14
Identity = 51/167 (30.54%), Postives = 82/167 (49.10%), Query Frame = 3 
Query:  108 HMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLRE-------YHVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            H P +  +  SMMM   ++       +LF    I +  ++A A +  F+ A+ YE  K  RE         + Y    V   + ++L    K+V +++   S  + LQ+++H+IQ  +SYFLMLI M++N Y+ I+V AG   GYF   +  A+      D  EHC 
Sbjct:   29 HHPTSSGSHESMMMPMTFYFGFKKVEVLFAGLVINTAGEMAGAFVAVFLLAMFYEGLKIAREGLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQM--LSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVV----DITEHCH 189
[Close]
BLAST of slc31a-1 vs. TrEMBL
Match: A0A0H3YJB4 (Slc31a-1 OS=Schmidtea mediterranea OX=79327 GN=slc31a-1 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 2.306e-112
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 3 
Query:   99 MDMHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ 569
            MDMHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ
Sbjct:    1 MDMHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ 157
[Close]
BLAST of slc31a-1 vs. TrEMBL
Match: A0A162R0J0 (CTR1, high-affinity copper uptake protein 1, copper transporter 1, solute carrier family 31 member 1 OS=Daphnia magna OX=35525 GN=APZ42_013270 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.072e-24
Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = 3 
Query:  120 NHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREY-------HVNYE-INLVANSSE--SLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFF 518
            NH +G  MMMM+MYF  D    +LF  W I S   +  +CIG F+ A+LYE  K  REY        VNY  +      SE  S +R  ++ K  V S ++++Q+ +HL+Q  +SYFLMLI+M++N ++FISVI G TVGYFF
Sbjct:   40 NHGDGGMMMMMQMYFYADYTAVVLFKQWDIQSVGAMVGSCIGIFLMAILYEGLKYFREYLSRKNYAPVNYNNVKTPEGGSEASSQVRTPMSFKTSVTSASHYIQTALHLLQMIISYFLMLIVMTYNVWLFISVILGCTVGYFF 182
[Close]
BLAST of slc31a-1 vs. TrEMBL
Match: A0A0P6H861 (High affinity copper uptake protein OS=Daphnia magna OX=35525 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.284e-21
Identity = 55/130 (42.31%), Postives = 77/130 (59.23%), Query Frame = 3 
Query:  159 YFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREY-------HVNYE-INLVANSSE--SLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFF 518
            YF  D    +LF  W I S   +  +CIG F+ A+LYE  K  REY        VNY  +      SE  S +R  ++ K  V S ++++Q+ +HL+Q  +SYFLMLI+M++N ++FISVI G TVGYFF
Sbjct:   52 YFYADYTAVVLFKQWDIQSVGAMVGSCIGIFLMAILYEGLKYFREYLSRKNYAPVNYNNVKTPEGGSEASSQVRTPMSFKTSVTSASHYIQTALHLLQMIISYFLMLIVMTYNVWLFISVILGCTVGYFF 181
[Close]
BLAST of slc31a-1 vs. TrEMBL
Match: A0A087TML0 (High affinity copper uptake protein 1 (Fragment) OS=Stegodyphus mimosarum OX=407821 GN=X975_01327 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.472e-20
Identity = 60/156 (38.46%), Postives = 89/156 (57.05%), Query Frame = 3 
Query:  129 NGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHV-----NYEINLVANSSESLLRKSVTRKVP---VFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF-FGNAICALDHRDSNEHCQ 569
            NGS  M M+MYF+  +  Y+LF  WQIT+   + A+ IG F+  +LYE  K  REY       N + + VA + ES  R +   KV    + S  + +Q+ +H++Q  VSYFLMLI M++N ++ ++V+ G  VGYF FG    ++   D  EHC 
Sbjct:   77 NGSMHMHMEMYFHFGVTEYVLFKGWQITTVGGMIASVIGIFLMGMLYEGLKYFREYLFKQYVSNIQFSTVAITGES-GRVTQVHKVERHRMLSWPHAIQTSLHIVQIVVSYFLMLIFMTYNVWLCLAVVLGAGVGYFVFGWKKASV--VDITEHCH 229
[Close]
BLAST of slc31a-1 vs. TrEMBL
Match: F1QKH1 (Solute carrier family 31 member 1 OS=Danio rerio OX=7955 GN=slc31a1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.348e-20
Identity = 64/162 (39.51%), Postives = 90/162 (55.56%), Query Frame = 3 
Query:  129 NGSSMMMMKM--YFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREY-------HVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            +G  MMMM+M  YF    N  LLF    I +  ++A ACIG F+ A+LYE  K  RE        +V Y    V  S  ++L    K+V +++   S A+FLQ+L+H+IQ  VSYFLML+ M++N Y+ I+V AG  +GYF   +  A+      D  EHC 
Sbjct:   34 HGDHMMMMQMTFYFGYK-NVELLFAGLVINTPGEMAGACIGVFLLAVLYEGLKIGREVLLRRNQVNVRYNSMPVPGSDGTVLMETHKTVGQRM--LSMAHFLQTLLHIIQVVVSYFLMLVFMTYNGYLCIAVAAGAGLGYFLFSWKKAVVV----DITEHCH 188
[Close]
BLAST of slc31a-1 vs. Ensembl Cavefish
Match: slc31a1 (solute carrier family 31 member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3])

HSP 1 Score: 79.7221 bits (195), Expect = 3.052e-18
Identity = 57/157 (36.31%), Postives = 81/157 (51.59%), Query Frame = 3 
Query:  144 MMMKM--YFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREY-------HVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            MMMKM  YF    N  LLF    I +  ++  ACIG F+ A  YE  K  RE        +V Y    V  +  ++L    K+V +++   S  +  Q+++H+IQ  VSYFLML+ M++N Y+ I+V AG  VGYF   +  A+      D  EHC 
Sbjct:   43 MMMKMTFYFGCK-NVELLFAGLVINTPGEMVGACIGVFLLAAFYEGLKIGREVLLRRNQVNVRYNSMPVPGADGTVLMETHKTVGQRM--LSLPHLFQTILHVIQVVVSYFLMLVFMTYNGYLCIAVAAGAGVGYFLFSWRKAVVV----DITEHCH 192
[Close]
BLAST of slc31a-1 vs. Ensembl Cavefish
Match: slc31a2 (solute carrier family 31 member 2 [Source:NCBI gene;Acc:103026823])

HSP 1 Score: 46.595 bits (109), Expect = 3.288e-6
Identity = 18/42 (42.86%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  396 LQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFG 521
            LQ+++H++Q  + Y LML +MS+N ++F+ VI G  +GYF  
Sbjct:  117 LQTVLHVVQVVLGYMLMLCVMSYNVWIFLGVIMGSLLGYFLA 158
[Close]
BLAST of slc31a-1 vs. Ensembl Nematostella
Match: EDO34361 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SPJ3])

HSP 1 Score: 83.5741 bits (205), Expect = 3.560e-20
Identity = 60/177 (33.90%), Postives = 86/177 (48.59%), Query Frame = 3 
Query:  111 MPMNHTNGSSMMM----------MKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLRE-------YHVNYEINLVANSSESLLRKSVTRKVPVFSRA------NFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF-FGNAICALDHRDSNEHCQ 569
            MPMN T   S+ M          MKM F       +LF  W + +   +  +CI  FI A+LYE  K  RE       Y +N +++     S      +VT       R+      +F+QSL+H++Q T+SYFLMLI M++N ++ I+V  G   GYF FG  +  +   D NEHC 
Sbjct:    6 MPMNATMAPSLGMDHGSMAHMGGMKMAFFFSKKTVILFEGWSVDTVGGMIGSCIAVFILAVLYEGLKVSREMLKRRYGYVMNVDMDTKVYGSNQNQTVTVTETRGHIPRSKICNLHHFIQSLLHIVQVTLSYFLMLIFMTYNGWLCIAVALGAGFGYFLFGWKLSKI--VDINEHCH 180
[Close]
BLAST of slc31a-1 vs. Ensembl Nematostella
Match: EDO27532 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T904])

HSP 1 Score: 74.3294 bits (181), Expect = 5.678e-17
Identity = 48/142 (33.80%), Postives = 74/142 (52.11%), Query Frame = 3 
Query:  186 LLFGAWQITSQSKLAAACIGSFICALLYELFKRLREY---------HVNYEINLVANSSESLLRKSVTRK-VPVFSRAN---FLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF-FGNAICALDHRDSNEHCQ 569
            +LF  W + +   +  +CI  FI A+LYE  K  RE           V+ +  +  ++    +  + TR  +P     N   F+QSL+H++Q T+SYFLMLI M++N ++ I+V  G   GYF FG  +  +   D NEHC 
Sbjct:   11 ILFEGWSVDTVGGMIGSCIAVFILAVLYEGLKVSREMLKRKYGYVMSVDMDTKVYGSNQNQTVTVTETRGHIPRSKICNLHHFIQSLLHIVQVTLSYFLMLIFMTYNGWLCIAVALGAGFGYFLFGWKLSKI--VDINEHCH 150
[Close]
BLAST of slc31a-1 vs. Ensembl Nematostella
Match: EDO34377 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SPJ2])

HSP 1 Score: 58.5362 bits (140), Expect = 4.938e-11
Identity = 38/137 (27.74%), Postives = 64/137 (46.72%), Query Frame = 3 
Query:  156 MYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSV--TRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNE 560
            M+F+      +LF  W+  S + +A + +  F  ++LYE  K  R Y    + N  A    +  R  +   R+ P     +   +   L+    +YFLML+ M+ N ++F S+I G  +GYFF   +C     D+ E
Sbjct:    1 MHFSAGDKVTILFEGWKTNSVTSMALSVLVVFFLSILYEFLKAFRIYKPRNQNNPEATLLLARNRNEIGLERRPPKSLGQHLEDTFFFLLNFIFAYFLMLVAMTCNAWLFSSIILGCGLGYFFAQPLCKHYLTDNPE 137
[Close]
BLAST of slc31a-1 vs. Ensembl Nematostella
Match: EDO34368 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SPK2])

HSP 1 Score: 46.595 bits (109), Expect = 2.679e-6
Identity = 37/163 (22.70%), Postives = 67/163 (41.10%), Query Frame = 3 
Query:  186 LLFGAWQITSQSKLAAACIGSFICALLYELFKRLR-------------------------------EYHVNYEIN-------------------LVANSSESLLRKSVTRKVP---VFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF 515
            LLF  W+++S + L  +C G F  ++L E  + LR                               +  +  E N                    + N S + L   + ++ P   + S+ +FLQ  +H++Q  + Y LML+IM+ + ++ ++V+ GL  GYF
Sbjct:  232 LLFEDWKLSSSTILIGSCAGVFFLSILSECVRALRSRIADQTTSENPNATTTYKTSFPKSTKNEEFQKDLQTEANGPQRDVSSSEAATDENTACTIQNGSGNELLPDIKQERPKLKITSKIHFLQLSLHILQVILGYALMLVIMTMDIWLGLAVVLGLGTGYF 394
[Close]
BLAST of slc31a-1 vs. Ensembl Medaka
Match: slc31a1 (solute carrier family 31 member 1 [Source:NCBI gene;Acc:101171633])

HSP 1 Score: 86.6557 bits (213), Expect = 8.176e-21
Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 3 
Query:  156 MYFNED-LNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREY-------HVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            M FN + LN  LLF    I S  ++ AACIG F+ A LYE  K  RE        +V Y    V  +  ++L    K+V +++   S A+FLQ+L+H+IQ  +SYFLMLI M++N Y+ I+V AG  +GYF   +  A+      D  EHC 
Sbjct:   44 MTFNLNYLNVPLLFEGLLINSPGEMVAACIGVFLLAALYEGLKIGREVLLRRSQVNVRYNSMPVPGADGTVLMETHKTVGQRM--LSSAHFLQTLLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGMGYFLFSWRKAVVV----DITEHCH 189
[Close]
BLAST of slc31a-1 vs. Ensembl Medaka
Match: slc31a1 (solute carrier family 31 member 1 [Source:NCBI gene;Acc:101171633])

HSP 1 Score: 86.6557 bits (213), Expect = 8.176e-21
Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 3 
Query:  156 MYFNED-LNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREY-------HVNYEINLVANSSESLL---RKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF---FGNAICALDHRDSNEHCQ 569
            M FN + LN  LLF    I S  ++ AACIG F+ A LYE  K  RE        +V Y    V  +  ++L    K+V +++   S A+FLQ+L+H+IQ  +SYFLMLI M++N Y+ I+V AG  +GYF   +  A+      D  EHC 
Sbjct:   44 MTFNLNYLNVPLLFEGLLINSPGEMVAACIGVFLLAALYEGLKIGREVLLRRSQVNVRYNSMPVPGADGTVLMETHKTVGQRM--LSSAHFLQTLLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGMGYFLFSWRKAVVV----DITEHCH 189
[Close]
BLAST of slc31a-1 vs. Ensembl Medaka
Match: slc31a2 (solute carrier family 31 member 2 [Source:NCBI gene;Acc:101163676])

HSP 1 Score: 48.9062 bits (115), Expect = 3.942e-7
Identity = 38/129 (29.46%), Postives = 64/129 (49.61%), Query Frame = 3 
Query:  186 LLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINL----------VANSSESLLRKSV-TRKVPV---FSRAN-----FLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF 515
            LLF  W + S + +  + +   + AL YE+ K  R +    ++ +          V + S S+L  S  T   PV    S  N      +Q+ +H++Q  + Y LML +MS+NT++F+ V+ G  +GYF
Sbjct:   11 LLFDFWDVHSPAGMVLSVLLVLLLALFYEVLKVWRVWLSGSQLAVRAPACTPPPSVHSESASMLEGSPETSLAPVELHTSGPNSWLLHVIQTALHVLQVVLGYMLMLCVMSYNTWIFLGVVLGSVLGYF 139
[Close]
BLAST of slc31a-1 vs. Planmine SMEST
Match: SMESG000005775.1 (SMESG000005775.1)

HSP 1 Score: 327.405 bits (838), Expect = 6.413e-116
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 3 
Query:   99 MDMHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ 569
            MDMHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ
Sbjct:    1 MDMHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ 157
[Close]
BLAST of slc31a-1 vs. Planmine SMEST
Match: SMESG000005775.1 (SMESG000005775.1)

HSP 1 Score: 322.398 bits (825), Expect = 5.605e-114
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 3 
Query:  105 MHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ 569
            MHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ
Sbjct:    1 MHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ 155
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BLAST of slc31a-1 vs. Planmine SMEST
Match: SMESG000005775.1 (SMESG000005775.1)

HSP 1 Score: 318.161 bits (814), Expect = 2.274e-112
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 3 
Query:  111 MPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ 569
            MPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ
Sbjct:    1 MPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ 153
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BLAST of slc31a-1 vs. Planmine SMEST
Match: SMESG000005775.1 (SMESG000005775.1)

HSP 1 Score: 312.768 bits (800), Expect = 3.327e-110
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 3 
Query:  117 MNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ 569
            MNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ
Sbjct:    1 MNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHRDSNEHCQ 151
[Close]
BLAST of slc31a-1 vs. Planmine SMEST
Match: SMESG000033605.1 (SMESG000033605.1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.102e-13
Identity = 53/173 (30.64%), Postives = 79/173 (45.66%), Query Frame = 3 
Query:  105 MHMPMNH-TNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGSFICALLYELFKRLRE------------YHVNYEIN--------------------LVANSSESLLRKSVTRKVPVFSRANFLQSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYF-FG 521
            MH  M H   GS+   M MYFN    FYL      ITS   +    I  F+  +LYE  K  RE            Y +N  +                     +  NSS +    ++TR    F++ + +QS++HL+QT +SY LML  M+FN ++ ++++ G  +GYF FG
Sbjct:   20 MHNQMKHGAAGSNHSGMTMYFNLANPFYLFLKELFITSNGAICGGAIVLFVLTILYEGLKTYREILLYRKIRKNRKYLMNESVTPSTLLNDNHHDITPSGDAEIITPNSSTTFKSFALTR----FTKDHVIQSILHLLQTFISYLLMLAFMTFNVWICLAILLGSMIGYFIFG 188
The following BLAST results are available for this feature:
BLAST of slc31a-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
SLC31A15.222e-1734.13solute carrier family 31 member 1 [Source:HGNC Sym... [more]
SLC31A25.376e-930.60solute carrier family 31 member 2 [Source:HGNC Sym... [more]
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BLAST of slc31a-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
K12C11.61.086e-1128.80pep chromosome:WBcel235:I:1337012:1338216:1 gene:W... [more]
F58G6.31.629e-1030.34pep chromosome:WBcel235:IV:9653535:9654175:1 gene:... [more]
Y58A7A.14.111e-1028.97pep chromosome:WBcel235:V:5067637:5069665:-1 gene:... [more]
K12C11.31.118e-927.41pep chromosome:WBcel235:I:1335395:1336867:1 gene:W... [more]
Y58A7A.11.937e-926.56pep chromosome:WBcel235:V:5067637:5068615:-1 gene:... [more]
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BLAST of slc31a-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Ctr1A9.108e-1329.11gene:FBgn0062413 transcript:FBtr0070951[more]
Ctr1A9.108e-1329.11gene:FBgn0062413 transcript:FBtr0308592[more]
Ctr1A1.195e-1229.17gene:FBgn0062413 transcript:FBtr0308593[more]
Ctr1A1.195e-1229.17gene:FBgn0062413 transcript:FBtr0308594[more]
Ctr1B2.734e-1026.25gene:FBgn0062412 transcript:FBtr0081835[more]
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BLAST of slc31a-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
slc31a11.049e-2339.51solute carrier family 31 member 1 [Source:ZFIN;Acc... [more]
slc31a11.049e-2339.51solute carrier family 31 member 1 [Source:ZFIN;Acc... [more]
slc31a12.696e-2339.51solute carrier family 31 member 1 [Source:ZFIN;Acc... [more]
slc31a26.676e-747.50solute carrier family 31 member 2 [Source:ZFIN;Acc... [more]
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BLAST of slc31a-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of slc31a-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Slc31a11.310e-1934.76solute carrier family 31, member 1 [Source:MGI Sym... [more]
Slc31a23.302e-931.34solute carrier family 31, member 2 [Source:MGI Sym... [more]
Slc31a28.396e-931.97solute carrier family 31, member 2 [Source:MGI Sym... [more]
Slc31a28.396e-931.97solute carrier family 31, member 2 [Source:MGI Sym... [more]
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BLAST of slc31a-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q8K211|COPT1_MOUSE9.164e-1934.76High affinity copper uptake protein 1 OS=Mus muscu... [more]
sp|O15431|COPT1_HUMAN2.508e-1634.13High affinity copper uptake protein 1 OS=Homo sapi... [more]
sp|Q5RAS6|COPT1_PONAB3.391e-1634.13High affinity copper uptake protein 1 OS=Pongo abe... [more]
sp|Q9JK41|COPT1_RAT4.610e-1532.07High affinity copper uptake protein 1 OS=Rattus no... [more]
sp|Q8WNR0|COPT1_PIG1.957e-1430.54High affinity copper uptake protein 1 OS=Sus scrof... [more]
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BLAST of slc31a-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0H3YJB42.306e-112100.00Slc31a-1 OS=Schmidtea mediterranea OX=79327 GN=slc... [more]
A0A162R0J04.072e-2444.06CTR1, high-affinity copper uptake protein 1, coppe... [more]
A0A0P6H8611.284e-2142.31High affinity copper uptake protein OS=Daphnia mag... [more]
A0A087TML01.472e-2038.46High affinity copper uptake protein 1 (Fragment) O... [more]
F1QKH12.348e-2039.51Solute carrier family 31 member 1 OS=Danio rerio O... [more]
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BLAST of slc31a-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
slc31a13.052e-1836.31solute carrier family 31 member 1 [Source:ZFIN;Acc... [more]
slc31a23.288e-642.86solute carrier family 31 member 2 [Source:NCBI gen... [more]
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BLAST of slc31a-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of slc31a-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of slc31a-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4
Match NameE-valueIdentityDescription
EDO343613.560e-2033.90Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO275325.678e-1733.80Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO343774.938e-1127.74Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO343682.679e-622.70Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of slc31a-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
slc31a18.176e-2139.47solute carrier family 31 member 1 [Source:NCBI gen... [more]
slc31a18.176e-2139.47solute carrier family 31 member 1 [Source:NCBI gen... [more]
slc31a23.942e-729.46solute carrier family 31 member 2 [Source:NCBI gen... [more]
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BLAST of slc31a-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000005775.16.413e-116100.00SMESG000005775.1[more]
SMESG000005775.15.605e-114100.00SMESG000005775.1[more]
SMESG000005775.12.274e-112100.00SMESG000005775.1[more]
SMESG000005775.13.327e-110100.00SMESG000005775.1[more]
SMESG000033605.13.102e-1330.64SMESG000033605.1[more]
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Cross References
External references for this transcript
DatabaseAccession
SmedGD GBrowseSMED30002486
GenBankAKN21631.1
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30002486 ID=SMED30002486|Name=slc31a-1|organism=Schmidtea mediterranea sexual|type=transcript|length=651bp
GTGTTTTTCAATAAATTTATATTTAATATATTTTACTTGATTATATTTAA
TCAAATATTTTCTTTTCTTACTGTATGATCATCAGTGCTAAATAAAAAAT
GGATATGCATATGCCTATGAATCATACCAATGGATCGTCGATGATGATGA
TGAAGATGTATTTCAACGAAGATTTAAATTTCTACTTACTTTTTGGGGCT
TGGCAAATTACAAGTCAATCCAAACTAGCTGCTGCTTGTATCGGATCTTT
TATTTGCGCATTGCTTTATGAATTATTCAAGAGACTCAGAGAATACCACG
TGAATTATGAAATAAATTTAGTAGCAAACTCCTCTGAAAGCCTTCTCAGA
AAATCGGTTACTCGAAAAGTCCCCGTATTCTCTAGAGCCAATTTCCTGCA
GTCATTAATGCATTTGATTCAAACAACGGTCAGTTATTTTCTGATGCTCA
TTATTATGTCATTCAATACTTACGTGTTTATATCGGTGATTGCGGGACTT
ACGGTCGGATACTTTTTTGGCAATGCAATTTGCGCTTTAGATCATCGGGA
CTCCAATGAGCACTGTCAGTAGTAATGATAATAGATAAACACCATATTAA
AACATTCAAATTTTTTATCTTGGATTTAGTAATATTTTTTTTAAATATAT
G
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protein sequence of SMED30002486-orf-1

>SMED30002486-orf-1 ID=SMED30002486-orf-1|Name=SMED30002486-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=158bp
MDMHMPMNHTNGSSMMMMKMYFNEDLNFYLLFGAWQITSQSKLAAACIGS
FICALLYELFKRLREYHVNYEINLVANSSESLLRKSVTRKVPVFSRANFL
QSLMHLIQTTVSYFLMLIIMSFNTYVFISVIAGLTVGYFFGNAICALDHR
DSNEHCQ*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0000026gut
PLANA:0000070intestinal phagocyte
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter
Vocabulary: biological process
TermDefinition
GO:0035434copper ion transmembrane transport
Vocabulary: cellular component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: molecular function
TermDefinition
GO:0005375copper ion transmembrane transporter activity
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 20..140
e-value: 1.7E-24
score: 87.1
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 1..146
NoneNo IPR availableTMHMMTMhelixcoord: 43..60
NoneNo IPR availableTMHMMTMhelixcoord: 21..38
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 98..120