Gamma-aminobutyric acid receptor-associated protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30002428 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 15
Homology
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Match: GABARAP (GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]) HSP 1 Score: 210.69 bits (535), Expect = 3.941e-69 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Match: GABARAPL1 (GABA type A receptor associated protein like 1 [Source:HGNC Symbol;Acc:HGNC:4068]) HSP 1 Score: 204.142 bits (518), Expect = 1.196e-66 Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG Sbjct: 1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Match: GABARAPL1 (GABA type A receptor associated protein like 1 [Source:HGNC Symbol;Acc:HGNC:4068]) HSP 1 Score: 204.142 bits (518), Expect = 1.196e-66 Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG Sbjct: 1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Match: GABARAP (GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]) HSP 1 Score: 170.629 bits (431), Expect = 1.074e-53 Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYE 348 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+ Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQ 96
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Match: GABARAPL1 (GABA type A receptor associated protein like 1 [Source:HGNC Symbol;Acc:HGNC:4068]) HSP 1 Score: 169.474 bits (428), Expect = 1.558e-52 Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYE 348 MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE Sbjct: 1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYE 96
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Match: lgg-1 (pep chromosome:WBcel235:II:6346960:6347719:-1 gene:WBGene00002980.1 transcript:C32D5.9.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgg-1) HSP 1 Score: 205.297 bits (521), Expect = 2.671e-67 Identity = 96/117 (82.05%), Postives = 109/117 (93.16%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 MKW YKEE++F+KRRAEG+KIR+KYPDR+PVIVEKAPK+++ DLDKKKYLVP+DLTVGQFYFLIRKRIQLR EDALFFFVNNVIP T TMG LY++HHEEDLFLY+AYSDESVYG Sbjct: 1 MKWAYKEENNFEKRRAEGDKIRRKYPDRIPVIVEKAPKSKLHDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPQTMTTMGQLYQDHHEEDLFLYIAYSDESVYGG 117
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Match: lgg-2 (pep chromosome:WBcel235:IV:10934201:10935903:-1 gene:WBGene00002981.1 transcript:ZK593.6a.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgg-2) HSP 1 Score: 72.7886 bits (177), Expect = 8.354e-16 Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVN-NVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 +KE F +R+ + E+IR + P++VPVI+E+ R +P +D+ K+LVP +TV + ++R+R+QL + A F VN + S +M LY + + D F+Y+ Y+ + +G Sbjct: 29 FKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 142
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Match: lgg-2 (pep chromosome:WBcel235:IV:10934186:10935914:-1 gene:WBGene00002981.1 transcript:ZK593.6a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgg-2) HSP 1 Score: 72.7886 bits (177), Expect = 8.354e-16 Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVN-NVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 +KE F +R+ + E+IR + P++VPVI+E+ R +P +D+ K+LVP +TV + ++R+R+QL + A F VN + S +M LY + + D F+Y+ Y+ + +G Sbjct: 29 FKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 142
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Match: lgg-2 (pep chromosome:WBcel235:IV:10934201:10935825:-1 gene:WBGene00002981.1 transcript:ZK593.6b.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgg-2) HSP 1 Score: 47.3654 bits (111), Expect = 2.604e-7 Identity = 24/74 (32.43%), Postives = 43/74 (58.11%), Query Frame = 1 Query: 190 LDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 +D+ K+LVP +TV + ++R+R+QL + A F VN + S +M LY + + D F+Y+ Y+ + +G Sbjct: 1 MDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 74
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Match: lgg-2 (pep chromosome:WBcel235:IV:10934201:10935825:-1 gene:WBGene00002981.1 transcript:ZK593.6b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgg-2) HSP 1 Score: 47.3654 bits (111), Expect = 2.604e-7 Identity = 24/74 (32.43%), Postives = 43/74 (58.11%), Query Frame = 1 Query: 190 LDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 +D+ K+LVP +TV + ++R+R+QL + A F VN + S +M LY + + D F+Y+ Y+ + +G Sbjct: 1 MDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 74
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Match: Atg8a (gene:FBgn0052672 transcript:FBtr0071498) HSP 1 Score: 211.846 bits (538), Expect = 7.065e-70 Identity = 100/116 (86.21%), Postives = 111/116 (95.69%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+QYKEEH+F+KRRAEG+KIR+KYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMG+LY+EHHEED FLY+AYSDE+VYG Sbjct: 1 MKFQYKEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Match: Atg8b (gene:FBgn0038539 transcript:FBtr0346730) HSP 1 Score: 194.126 bits (492), Expect = 5.853e-63 Identity = 91/116 (78.45%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 M +QYK++HSFDKRR EG+KIR+KYPDRVPVIVEKAPK R +LDKKKYLVP DLTVGQFYFLIRKRI LR +DALFFFVNNVIPPTS TMGALY+EH ++D FLY++Y+DE+VYG Sbjct: 3 MNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFYFLIRKRINLRPDDALFFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Match: Atg8b (gene:FBgn0038539 transcript:FBtr0083533) HSP 1 Score: 194.126 bits (492), Expect = 5.853e-63 Identity = 91/116 (78.45%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 M +QYK++HSFDKRR EG+KIR+KYPDRVPVIVEKAPK R +LDKKKYLVP DLTVGQFYFLIRKRI LR +DALFFFVNNVIPPTS TMGALY+EH ++D FLY++Y+DE+VYG Sbjct: 3 MNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFYFLIRKRINLRPDDALFFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Match: Atg8a (gene:FBgn0052672 transcript:FBtr0346376) HSP 1 Score: 160.999 bits (406), Expect = 4.365e-50 Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 1 Query: 121 IRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 I K + VIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMG+LY+EHHEED FLY+AYSDE+VYG Sbjct: 7 IMNKKKQMIQVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 102
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Match: Atg8a (gene:FBgn0052672 transcript:FBtr0346375) HSP 1 Score: 157.918 bits (398), Expect = 5.516e-49 Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 1 Query: 151 VIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 VIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMG+LY+EHHEED FLY+AYSDE+VYG Sbjct: 6 VIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 91
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Match: gabarapb (GABA(A) receptor-associated protein b [Source:ZFIN;Acc:ZDB-GENE-101102-9]) HSP 1 Score: 221.476 bits (563), Expect = 3.655e-73 Identity = 104/123 (84.55%), Postives = 114/123 (92.68%), Query Frame = 1 Query: 40 ILLVKSKMKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 +LL + MK+QYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 29 LLLTATTMKFQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 151
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Match: gabarapa (GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]) HSP 1 Score: 211.075 bits (536), Expect = 1.948e-69 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFMYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Match: gabarapa (GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]) HSP 1 Score: 211.075 bits (536), Expect = 1.948e-69 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFMYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Match: gabarapb (GABA(A) receptor-associated protein b [Source:ZFIN;Acc:ZDB-GENE-101102-9]) HSP 1 Score: 209.92 bits (533), Expect = 5.617e-69 Identity = 100/114 (87.72%), Postives = 108/114 (94.74%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESV 402 MK+QYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESV Sbjct: 1 MKFQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESV 114
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Match: zgc:92606 (zgc:92606 [Source:ZFIN;Acc:ZDB-GENE-040718-462]) HSP 1 Score: 153.68 bits (387), Expect = 5.779e-47 Identity = 73/117 (62.39%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 M QY+ + RRAEGE++R K+PD++P+IVE+A ++R P+LDKKKYLVP+DLTVGQ FLIR+R+ +R E+ALFFFV N +PP+S + A+YEEHHEEDLFLY+ YS+ESVYGA Sbjct: 1 MSSQYQRSVPLEVRRAEGERVRAKHPDKIPIIVERAARSRAPELDKKKYLVPSDLTVGQLCFLIRQRVSMRPEEALFFFVKNSLPPSSSPLSAVYEEHHEEDLFLYMTYSNESVYGA 117
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Match: gabarapl1 (GABA(A) receptor-associated protein like 1 [Source:NCBI gene;Acc:595040]) HSP 1 Score: 204.142 bits (518), Expect = 1.085e-66 Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG Sbjct: 1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Match: gabarapl1 (GABA(A) receptor-associated protein like 1 [Source:NCBI gene;Acc:595040]) HSP 1 Score: 204.142 bits (518), Expect = 1.085e-66 Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG Sbjct: 1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Match: or3a1 (olfactory receptor family 3 subfamily A member 1 [Source:Xenbase;Acc:XB-GENE-6039050]) HSP 1 Score: 151.369 bits (381), Expect = 6.521e-46 Identity = 69/117 (58.97%), Postives = 89/117 (76.07%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 MKW +KE+HS + R E KIR KYPDRVPVIVEK +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+ +P +S TMG LYE+ +ED FLYVAYS E+ +G Sbjct: 1 MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGV 117
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Match: or3a1 (olfactory receptor family 3 subfamily A member 1 [Source:Xenbase;Acc:XB-GENE-6039050]) HSP 1 Score: 133.65 bits (335), Expect = 6.949e-39 Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 1 Query: 100 RRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 R E KIR KYPDRVPVIVEK +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+ +P +S TMG LYE+ +ED FLYVAYS E+ +G Sbjct: 19 RCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGV 122
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Match: map1lc3c (microtubule associated protein 1 light chain 3 gamma [Source:NCBI gene;Acc:733779]) HSP 1 Score: 92.0485 bits (227), Expect = 6.532e-23 Identity = 45/114 (39.47%), Postives = 71/114 (62.28%), Query Frame = 1 Query: 73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 +K+ S R+ E I+ K+P ++PVIVE+ + + +P LDK K+LVP DL++ QF +IR R+ L + A + VNN + S TM LY +H +ED FLY+ Y+ + ++G Sbjct: 11 FKQRKSLASRKEEVIGIKAKFPTKIPVIVERYRREKYLPLLDKTKFLVPKDLSMMQFINIIRNRMNLSATQAFYLLVNNKSLASMSLTMAELYRDHKDEDGFLYMTYASQEMFG 124
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Match: Gabarap (gamma-aminobutyric acid receptor associated protein [Source:MGI Symbol;Acc:MGI:1861742]) HSP 1 Score: 210.69 bits (535), Expect = 2.705e-69 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Match: Gabarapl1 (gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1 [Source:MGI Symbol;Acc:MGI:1914980]) HSP 1 Score: 204.142 bits (518), Expect = 8.214e-67 Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG Sbjct: 1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Match: Gabarapl1 (gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1 [Source:MGI Symbol;Acc:MGI:1914980]) HSP 1 Score: 204.142 bits (518), Expect = 8.214e-67 Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG Sbjct: 1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Match: Gabarapl2 (gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 [Source:MGI Symbol;Acc:MGI:1890602]) HSP 1 Score: 150.984 bits (380), Expect = 6.336e-46 Identity = 69/116 (59.48%), Postives = 89/116 (76.72%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MKW +KE+HS + R E KIR KYPDRVPVIVEK +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+ +P +S TMG LYE+ +ED FLYVAYS E+ +G Sbjct: 1 MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Match: Gabarap (gamma-aminobutyric acid receptor associated protein [Source:MGI Symbol;Acc:MGI:1861742]) HSP 1 Score: 103.219 bits (256), Expect = 1.735e-27 Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYE 348 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTV ++ R ++ S F+ + V+ + A+ E Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVPRWVSCTRNTMKKTS----FYTLPTVMKASMVCEAAVPE 92
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Match: sp|P60517|GBRAP_RAT (Gamma-aminobutyric acid receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Gabarap PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.892e-68 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Match: sp|Q8MK68|GBRAP_RABIT (Gamma-aminobutyric acid receptor-associated protein OS=Oryctolagus cuniculus OX=9986 GN=GABARAP PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.892e-68 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Match: sp|Q9DCD6|GBRAP_MOUSE (Gamma-aminobutyric acid receptor-associated protein OS=Mus musculus OX=10090 GN=Gabarap PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 1.892e-68 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Match: sp|O95166|GBRAP_HUMAN (Gamma-aminobutyric acid receptor-associated protein OS=Homo sapiens OX=9606 GN=GABARAP PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.892e-68 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Match: sp|Q9GJW7|GBRAP_BOVIN (Gamma-aminobutyric acid receptor-associated protein OS=Bos taurus OX=9913 GN=GABARAP PE=3 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 1.892e-68 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Match: A0A1L7H9T8 (ATG8-1 OS=Dugesia japonica OX=6161 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 2.455e-77 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 MKWQYKEEH FDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA Sbjct: 1 MKWQYKEEHQFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 117
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Match: A0A1I8JGM4 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 2.969e-71 Identity = 108/119 (90.76%), Postives = 112/119 (94.12%), Query Frame = 1 Query: 55 SKMKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 SKMKWQYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKARV DLDKKKYLVP+DLTVGQFYFLIRKRIQLR EDALFFFVNNVIPPTS TMGALY EHHEED FLY+AYSDESVYG Sbjct: 2 SKMKWQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARVGDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPPTSATMGALYSEHHEEDFFLYIAYSDESVYGC 120
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Match: A0A1I8H5P5 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig024029g1 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.089e-70 Identity = 107/119 (89.92%), Postives = 112/119 (94.12%), Query Frame = 1 Query: 55 SKMKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 SKMKWQYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKARV DLDKKKYLVP+DLTVGQFYFLIRKRIQLR EDALFFFVNNVIPPTS TMGALY +HHEED FLY+AYSDESVYG Sbjct: 2 SKMKWQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARVGDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPPTSATMGALYSDHHEEDFFLYIAYSDESVYGC 120
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Match: A0A2C9K2E5 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106078713 PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.993e-70 Identity = 107/117 (91.45%), Postives = 111/117 (94.87%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 MKWQYKEEH F+KRRAEGEKIRKKYPDRVPVIVEKAPKARV DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMGALY+EHHEED FLY+AYSDESVYGA Sbjct: 1 MKWQYKEEHPFEKRRAEGEKIRKKYPDRVPVIVEKAPKARVGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGALYQEHHEEDFFLYIAYSDESVYGA 117
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Match: D7RP03 (GABA(A) receptor-associated protein OS=Haliotis diversicolor OX=36095 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.993e-70 Identity = 107/117 (91.45%), Postives = 111/117 (94.87%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 MKWQYKEEH F+KRRAEGEKIRKKYPDRVPVIVEKAPKARV DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMGALY+EHHEED FLY+AYSDESVYGA Sbjct: 1 MKWQYKEEHPFEKRRAEGEKIRKKYPDRVPVIVEKAPKARVGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGALYQEHHEEDFFLYIAYSDESVYGA 117
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Match: gabarapb (gamma-aminobutyric acid receptor-associated protein [Source:NCBI gene;Acc:103039768]) HSP 1 Score: 213.386 bits (542), Expect = 1.824e-70 Identity = 102/116 (87.93%), Postives = 110/116 (94.83%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+QYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Match: ENSAMXT00000014245.2 (gamma-aminobutyric acid receptor-associated protein [Source:NCBI gene;Acc:103044705]) HSP 1 Score: 210.69 bits (535), Expect = 2.217e-69 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Match: ENSAMXT00000050433.1 (gamma-aminobutyric acid receptor-associated protein [Source:NCBI gene;Acc:103044705]) HSP 1 Score: 171.785 bits (434), Expect = 4.483e-54 Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYE 348 MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+ Sbjct: 1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQ 96
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Match: zgc:92606 (gamma-aminobutyric acid receptor-associated protein-like 1 [Source:NCBI gene;Acc:103027931]) HSP 1 Score: 152.91 bits (385), Expect = 1.104e-46 Identity = 73/117 (62.39%), Postives = 95/117 (81.20%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 M QY+ FD RR EGE++R K+PD++P+IVE+A ++R P+LDKKKYLVP+DLTVGQ FLIR+R+ +R E+ALFFFV N +PP+S + +YEEHHEEDLFLY+ YS+ESVYGA Sbjct: 1 MSSQYQRSVPFDVRRLEGERVRAKHPDKIPIIVERASRSRAPELDKKKYLVPSDLTVGQLCFLIRQRVSMRPEEALFFFVKNSLPPSSSPLSVVYEEHHEEDLFLYMTYSNESVYGA 117
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Match: gabarapl2 (GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]) HSP 1 Score: 151.369 bits (381), Expect = 5.897e-46 Identity = 69/118 (58.47%), Postives = 90/118 (76.27%), Query Frame = 1 Query: 55 SKMKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 + MKW +KE+HS + R E KIR KYPDRVPVIVEK +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+ +P +S TMG LYE+ +ED FLYVAYS E+ +G Sbjct: 16 ATMKWMFKEDHSLEHRCVESAKIRNKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 133
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Sea Lamprey
Match: gabarapl2 (GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]) HSP 1 Score: 153.68 bits (387), Expect = 1.321e-47 Identity = 67/118 (56.78%), Postives = 93/118 (78.81%), Query Frame = 1 Query: 55 SKMKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 + MKW +KE+HSF+ RRAE KIR KYPDRVPV+VEK P +++ D+DK+KYLVP D+TV QF ++IRKR+QL S+ A+F F++ +P +S ++G LYE+ +ED FLYVAYS E+ +G Sbjct: 12 AAMKWMFKEDHSFEHRRAESNKIRNKYPDRVPVVVEKVPGSQIGDIDKRKYLVPADITVAQFMWIIRKRVQLPSDKAIFLFIDKTVPQSSASIGQLYEDQKDEDGFLYVAYSGENTFG 129
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Sea Lamprey
Match: map1lc3a (microtubule-associated protein 1 light chain 3 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2232]) HSP 1 Score: 76.2554 bits (186), Expect = 7.586e-18 Identity = 37/114 (32.46%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEK-APKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 +K+ SF +R + E IR ++P+++PVI+E+ + ++P LDK K+LVP+ + + + +IR+R+QL A F VN + + + +YE+ ++D FLY+ Y+ + +G Sbjct: 7 FKQRRSFTERVKDVELIRSQHPNKIPVIIERYRGEKQLPMLDKTKFLVPDHVNMSELVKIIRRRLQLNPNQAFFLLVNQRSMVSVAAPICEVYEQERDDDGFLYMVYASQETFG 120
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Sea Lamprey
Match: map1lc3a (microtubule-associated protein 1 light chain 3 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2232]) HSP 1 Score: 75.485 bits (184), Expect = 1.776e-17 Identity = 35/111 (31.53%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 85 HSFDKRRAEGEKIRKKYPDRVPVIVEK-APKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 H+ +++R + E+IR ++P+++PVI+E+ + ++P LDK K+LVP+ + + + ++R+R+QL A F VN + + + +YE+ +ED FLY+ Y+ + +G+ Sbjct: 16 HAVERQR-DVEQIRSQHPNKIPVIIERYRGEKQLPMLDKTKFLVPDHVNISELVKILRRRLQLSPNQAFFLLVNQRSMVSVAVPISQVYEQEKDEDGFLYMVYASQETFGS 125
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Yeast
Match: ATG8 (Component of autophagosomes and Cvt vesicles; regulator of Atg1p, targets it to autophagosomes; binds the Atg1p-Atg13p complex, triggering its vacuolar degradation; unique ubiquitin-like protein whose conjugation target is lipid phosphatidylethanolamine (PE); Atg8p-PE is anchored to membranes, is involved in phagophore expansion, and may mediate membrane fusion during autophagosome formation; deconjugation of Atg8p-PE is required for efficient autophagosome biogenesis [Source:SGD;Acc:S000000174]) HSP 1 Score: 140.198 bits (352), Expect = 1.190e-42 Identity = 63/116 (54.31%), Postives = 89/116 (76.72%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK +K E+ F+KR+AE E+I ++ +R+PVI EKA K+ +P++DK+KYLVP DLTVGQF ++IRKRI L E A+F FVN+ +PPT+ M A+Y+EH ++D FLYV YS E+ +G Sbjct: 1 MKSTFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Nematostella
Match: EDO42340 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S1K4]) HSP 1 Score: 215.698 bits (548), Expect = 7.184e-72 Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 MKW+YKEEH F+KRRAEGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG Sbjct: 1 MKWEYKEEHPFEKRRAEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGC 117
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Nematostella
Match: EDO45913 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRA1]) HSP 1 Score: 164.851 bits (416), Expect = 7.936e-52 Identity = 74/116 (63.79%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MKW +KEEHS D R E KIR KYPDR+PV+VEKAPK+ + D+DK+K+LVP+DLTV QF ++IRKRIQL E A+F FVN V+P TS TMG++YEEH +ED FLY+AYS E+ +G Sbjct: 1 MKWAFKEEHSLDSRCQESSKIRLKYPDRIPVVVEKAPKSTIQDIDKRKFLVPSDLTVAQFMYIIRKRIQLPPEKAMFLFVNKVLPTTSSTMGSIYEEHKDEDGFLYIAYSGENTFG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Nematostella
Match: EDO43061 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZW6]) HSP 1 Score: 98.5969 bits (244), Expect = 8.212e-26 Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 +K+ SF RR E IR K+P ++PVIVE+ K + +P LDK K+LVP +LT+ QF +IR R+ L S A + VNN + S TM LY E +ED FLY+ Y+ + ++G+ Sbjct: 14 FKQRKSFVSRRDEVAGIRAKFPSKIPVIVERYHKEKDLPLLDKTKFLVPQELTMSQFVTIIRNRMSLSSTQAFYLIVNNKSLASMSMTMAELYREEKDEDGFLYMVYASQEMFGS 128
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Nematostella
Match: EDO35774 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKK3]) HSP 1 Score: 87.0409 bits (214), Expect = 8.011e-22 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 100 RRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVN--NVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 RR + E I K+YPD++PVIVE+ + +P LDK KYLVP DLT+ +IRKR+QL A F VN N++ S T+G +Y + +ED FLY+ ++ + +G Sbjct: 5 RRRDSETITKQYPDKIPVIVERLKTEKNLPILDKIKYLVPGDLTMSSLASIIRKRLQLGPTQAFFLLVNEKNMV-SISTTVGEVYRDERDEDGFLYMVFASQESFG 109
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Match: gabarapb (GABA type A receptor-associated protein [Source:NCBI gene;Acc:101158482]) HSP 1 Score: 207.994 bits (528), Expect = 1.059e-67 Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDES 399 MK+QYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDES Sbjct: 1 MKFQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDES 113
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Match: zgc:92606 (gamma-aminobutyric acid receptor-associated protein-like 1 [Source:NCBI gene;Acc:101170049]) HSP 1 Score: 173.711 bits (439), Expect = 6.385e-55 Identity = 77/117 (65.81%), Postives = 98/117 (83.76%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 M QY+ + RRAEGE++R K+PD++P+IVE+APK+R P+LDKKKYLVP+DLTVGQ FLIR+R+ LR E+ALFFFVNN +PP+SF + A+YEEHH+EDLFLY+ YS ESVYGA Sbjct: 1 MGSQYQRSVPLEVRRAEGERVRAKHPDKIPIIVERAPKSRAPELDKKKYLVPSDLTVGQLCFLIRQRVSLRPEEALFFFVNNSLPPSSFPLSAVYEEHHQEDLFLYMTYSTESVYGA 117
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Match: GABARAPL2 (gamma-aminobutyric acid receptor-associated protein-like 2 [Source:NCBI gene;Acc:101171396]) HSP 1 Score: 149.058 bits (375), Expect = 2.952e-45 Identity = 68/116 (58.62%), Postives = 89/116 (76.72%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MKW +KE+HS + R E KIR KYPDRVPVIVEK +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+ +P +S TMG LY++ +ED FLYVAYS E+ +G Sbjct: 1 MKWTFKEDHSVEHRCIESAKIRSKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSITMGQLYDKEKDEDGFLYVAYSGENTFG 116
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Match: ENSORLT00000018992.2 (gamma-aminobutyric acid receptor-associated protein-like 2 [Source:NCBI gene;Acc:101168456]) HSP 1 Score: 113.62 bits (283), Expect = 7.377e-32 Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPT 321 MKW +KE+HS + R E KIR KYPDRVPVIVEK +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+ +P + Sbjct: 1 MKWMFKEDHSLEHRCVESAKIRNKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQS 87
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Match: map1lc3c (microtubule associated protein 1 light chain 3 gamma [Source:NCBI gene;Acc:101162187]) HSP 1 Score: 97.0561 bits (240), Expect = 5.150e-25 Identity = 45/114 (39.47%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNV-IPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 +K+ SF R+ E I+ K+P+++PVI+E+ K R +P LDK K+LVP++LT+ QF +IR R+ L A + +N+ +P S TM +Y++H +ED FLY+ Y+ + ++G Sbjct: 14 FKQRKSFATRKQEVAGIKSKFPNKIPVIIERYDKERFLPPLDKTKFLVPHELTMTQFVTIIRNRMALLPSQAFYLLINSSGLPSMSLTMAQVYKDHQDEDGFLYMTYASQEMFG 127
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Planmine SMEST
Match: SMESG000026465.1 (SMESG000026465.1) HSP 1 Score: 241.121 bits (614), Expect = 1.462e-81 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA Sbjct: 1 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 117
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Planmine SMEST
Match: SMESG000033716.1 (SMESG000033716.1) HSP 1 Score: 136.346 bits (342), Expect = 2.015e-40 Identity = 62/116 (53.45%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408 MK++++ EHSFDKR + +KI+ KYP R+P+IVEK P +R+ ++DK K+LVP D+TV QF +++RKRI L S+ ALF FV +P S TMG LYE+ +ED FLY AYS E+ +G Sbjct: 1 MKFKFQVEHSFDKRLEDSQKIKAKYPQRIPIIVEKHPSSRLIEIDKHKFLVPADITVAQFMWILRKRIDLSSDKALFLFVGKSVPQASMTMGQLYEDFRDEDGFLYAAYSGENSFG 116 The following BLAST results are available for this feature:
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30002428 ID=SMED30002428|Name=Gamma-aminobutyric acid receptor-associated protein|organism=Schmidtea mediterranea sexual|type=transcript|length=813bpback to top protein sequence of SMED30002428-orf-1 >SMED30002428-orf-1 ID=SMED30002428-orf-1|Name=SMED30002428-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=118bp MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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