Gamma-aminobutyric acid receptor-associated protein

Overview
NameGamma-aminobutyric acid receptor-associated protein
Smed IDSMED30002428
Length (bp)813
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Gamma-aminobutyric acid receptor-associated protein (SMED30002428) t-SNE clustered cells

Violin plots show distribution of expression levels for Gamma-aminobutyric acid receptor-associated protein (SMED30002428) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Gamma-aminobutyric acid receptor-associated protein (SMED30002428) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Gamma-aminobutyric acid receptor-associated protein (SMED30002428) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30002428

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 15

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
intestinal phagocyteSMED30002428SMESG000026465.1 PL06013A1H06ncbi_smed_estsPMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30002428SMESG000026465.1 Contig2587GPL15192PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
pharynxSMED30002428SMESG000026465.1 dd_Smed_v4_600_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
protonephridiaSMED30002428SMESG000026465.1 dd_Smed_v4_600_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30002428SMESG000026465.1 dd_Smed_v4_600_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30002428SMESG000026465.1 dd_Smed_v4_600_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30002428SMESG000026465.1 dd_Smed_v4_600_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30002428SMESG000026465.1 dd_Smed_v4_600_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30002428SMESG000026465.1 dd_Smed_v4_600_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30002428SMESG000026465.1 dd_Smed_v4_600_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30002428SMESG000026465.1 dd_Smed_v4_600_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30002428SMESG000026465.1 Contig50259uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30002428SMESG000026465.1 Contig50259newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
pharynxSMED30002428SMESG000026465.1 dd_Smed_v6_600_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30002428SMESG000026465.1 dd_Smed_v4_600_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Match: GABARAP (GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067])

HSP 1 Score: 210.69 bits (535), Expect = 3.941e-69
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Match: GABARAPL1 (GABA type A receptor associated protein like 1 [Source:HGNC Symbol;Acc:HGNC:4068])

HSP 1 Score: 204.142 bits (518), Expect = 1.196e-66
Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG
Sbjct:    1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Match: GABARAPL1 (GABA type A receptor associated protein like 1 [Source:HGNC Symbol;Acc:HGNC:4068])

HSP 1 Score: 204.142 bits (518), Expect = 1.196e-66
Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG
Sbjct:    1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Match: GABARAP (GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067])

HSP 1 Score: 170.629 bits (431), Expect = 1.074e-53
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYE 348
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQ 96
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Match: GABARAPL1 (GABA type A receptor associated protein like 1 [Source:HGNC Symbol;Acc:HGNC:4068])

HSP 1 Score: 169.474 bits (428), Expect = 1.558e-52
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYE 348
            MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE
Sbjct:    1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYE 96
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Match: lgg-1 (pep chromosome:WBcel235:II:6346960:6347719:-1 gene:WBGene00002980.1 transcript:C32D5.9.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgg-1)

HSP 1 Score: 205.297 bits (521), Expect = 2.671e-67
Identity = 96/117 (82.05%), Postives = 109/117 (93.16%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            MKW YKEE++F+KRRAEG+KIR+KYPDR+PVIVEKAPK+++ DLDKKKYLVP+DLTVGQFYFLIRKRIQLR EDALFFFVNNVIP T  TMG LY++HHEEDLFLY+AYSDESVYG 
Sbjct:    1 MKWAYKEENNFEKRRAEGDKIRRKYPDRIPVIVEKAPKSKLHDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPQTMTTMGQLYQDHHEEDLFLYIAYSDESVYGG 117
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Match: lgg-2 (pep chromosome:WBcel235:IV:10934201:10935903:-1 gene:WBGene00002981.1 transcript:ZK593.6a.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgg-2)

HSP 1 Score: 72.7886 bits (177), Expect = 8.354e-16
Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = 1 
Query:   73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVN-NVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            +KE   F +R+ + E+IR + P++VPVI+E+    R +P +D+ K+LVP  +TV +   ++R+R+QL  + A F  VN   +   S +M  LY +  + D F+Y+ Y+ +  +G
Sbjct:   29 FKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 142
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Match: lgg-2 (pep chromosome:WBcel235:IV:10934186:10935914:-1 gene:WBGene00002981.1 transcript:ZK593.6a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgg-2)

HSP 1 Score: 72.7886 bits (177), Expect = 8.354e-16
Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = 1 
Query:   73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVN-NVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            +KE   F +R+ + E+IR + P++VPVI+E+    R +P +D+ K+LVP  +TV +   ++R+R+QL  + A F  VN   +   S +M  LY +  + D F+Y+ Y+ +  +G
Sbjct:   29 FKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 142
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Match: lgg-2 (pep chromosome:WBcel235:IV:10934201:10935825:-1 gene:WBGene00002981.1 transcript:ZK593.6b.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgg-2)

HSP 1 Score: 47.3654 bits (111), Expect = 2.604e-7
Identity = 24/74 (32.43%), Postives = 43/74 (58.11%), Query Frame = 1 
Query:  190 LDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            +D+ K+LVP  +TV +   ++R+R+QL  + A F  VN   +   S +M  LY +  + D F+Y+ Y+ +  +G
Sbjct:    1 MDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 74
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Match: lgg-2 (pep chromosome:WBcel235:IV:10934201:10935825:-1 gene:WBGene00002981.1 transcript:ZK593.6b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lgg-2)

HSP 1 Score: 47.3654 bits (111), Expect = 2.604e-7
Identity = 24/74 (32.43%), Postives = 43/74 (58.11%), Query Frame = 1 
Query:  190 LDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            +D+ K+LVP  +TV +   ++R+R+QL  + A F  VN   +   S +M  LY +  + D F+Y+ Y+ +  +G
Sbjct:    1 MDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 74
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Match: Atg8a (gene:FBgn0052672 transcript:FBtr0071498)

HSP 1 Score: 211.846 bits (538), Expect = 7.065e-70
Identity = 100/116 (86.21%), Postives = 111/116 (95.69%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+QYKEEH+F+KRRAEG+KIR+KYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMG+LY+EHHEED FLY+AYSDE+VYG
Sbjct:    1 MKFQYKEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Match: Atg8b (gene:FBgn0038539 transcript:FBtr0346730)

HSP 1 Score: 194.126 bits (492), Expect = 5.853e-63
Identity = 91/116 (78.45%), Postives = 105/116 (90.52%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            M +QYK++HSFDKRR EG+KIR+KYPDRVPVIVEKAPK R  +LDKKKYLVP DLTVGQFYFLIRKRI LR +DALFFFVNNVIPPTS TMGALY+EH ++D FLY++Y+DE+VYG
Sbjct:    3 MNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFYFLIRKRINLRPDDALFFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Match: Atg8b (gene:FBgn0038539 transcript:FBtr0083533)

HSP 1 Score: 194.126 bits (492), Expect = 5.853e-63
Identity = 91/116 (78.45%), Postives = 105/116 (90.52%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            M +QYK++HSFDKRR EG+KIR+KYPDRVPVIVEKAPK R  +LDKKKYLVP DLTVGQFYFLIRKRI LR +DALFFFVNNVIPPTS TMGALY+EH ++D FLY++Y+DE+VYG
Sbjct:    3 MNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFYFLIRKRINLRPDDALFFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Match: Atg8a (gene:FBgn0052672 transcript:FBtr0346376)

HSP 1 Score: 160.999 bits (406), Expect = 4.365e-50
Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 1 
Query:  121 IRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            I  K    + VIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMG+LY+EHHEED FLY+AYSDE+VYG
Sbjct:    7 IMNKKKQMIQVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 102
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Match: Atg8a (gene:FBgn0052672 transcript:FBtr0346375)

HSP 1 Score: 157.918 bits (398), Expect = 5.516e-49
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 1 
Query:  151 VIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            VIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMG+LY+EHHEED FLY+AYSDE+VYG
Sbjct:    6 VIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 91
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Match: gabarapb (GABA(A) receptor-associated protein b [Source:ZFIN;Acc:ZDB-GENE-101102-9])

HSP 1 Score: 221.476 bits (563), Expect = 3.655e-73
Identity = 104/123 (84.55%), Postives = 114/123 (92.68%), Query Frame = 1 
Query:   40 ILLVKSKMKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            +LL  + MK+QYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:   29 LLLTATTMKFQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 151
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Match: gabarapa (GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174])

HSP 1 Score: 211.075 bits (536), Expect = 1.948e-69
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFMYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Match: gabarapa (GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174])

HSP 1 Score: 211.075 bits (536), Expect = 1.948e-69
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFMYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Match: gabarapb (GABA(A) receptor-associated protein b [Source:ZFIN;Acc:ZDB-GENE-101102-9])

HSP 1 Score: 209.92 bits (533), Expect = 5.617e-69
Identity = 100/114 (87.72%), Postives = 108/114 (94.74%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESV 402
            MK+QYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESV
Sbjct:    1 MKFQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESV 114
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Match: zgc:92606 (zgc:92606 [Source:ZFIN;Acc:ZDB-GENE-040718-462])

HSP 1 Score: 153.68 bits (387), Expect = 5.779e-47
Identity = 73/117 (62.39%), Postives = 96/117 (82.05%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            M  QY+     + RRAEGE++R K+PD++P+IVE+A ++R P+LDKKKYLVP+DLTVGQ  FLIR+R+ +R E+ALFFFV N +PP+S  + A+YEEHHEEDLFLY+ YS+ESVYGA
Sbjct:    1 MSSQYQRSVPLEVRRAEGERVRAKHPDKIPIIVERAARSRAPELDKKKYLVPSDLTVGQLCFLIRQRVSMRPEEALFFFVKNSLPPSSSPLSAVYEEHHEEDLFLYMTYSNESVYGA 117
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Match: gabarapl1 (GABA(A) receptor-associated protein like 1 [Source:NCBI gene;Acc:595040])

HSP 1 Score: 204.142 bits (518), Expect = 1.085e-66
Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG
Sbjct:    1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Match: gabarapl1 (GABA(A) receptor-associated protein like 1 [Source:NCBI gene;Acc:595040])

HSP 1 Score: 204.142 bits (518), Expect = 1.085e-66
Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG
Sbjct:    1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Match: or3a1 (olfactory receptor family 3 subfamily A member 1 [Source:Xenbase;Acc:XB-GENE-6039050])

HSP 1 Score: 151.369 bits (381), Expect = 6.521e-46
Identity = 69/117 (58.97%), Postives = 89/117 (76.07%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            MKW +KE+HS + R  E  KIR KYPDRVPVIVEK   +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+  +P +S TMG LYE+  +ED FLYVAYS E+ +G 
Sbjct:    1 MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGV 117
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Match: or3a1 (olfactory receptor family 3 subfamily A member 1 [Source:Xenbase;Acc:XB-GENE-6039050])

HSP 1 Score: 133.65 bits (335), Expect = 6.949e-39
Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 1 
Query:  100 RRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            R  E  KIR KYPDRVPVIVEK   +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+  +P +S TMG LYE+  +ED FLYVAYS E+ +G 
Sbjct:   19 RCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGV 122
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Match: map1lc3c (microtubule associated protein 1 light chain 3 gamma [Source:NCBI gene;Acc:733779])

HSP 1 Score: 92.0485 bits (227), Expect = 6.532e-23
Identity = 45/114 (39.47%), Postives = 71/114 (62.28%), Query Frame = 1 
Query:   73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            +K+  S   R+ E   I+ K+P ++PVIVE+  + + +P LDK K+LVP DL++ QF  +IR R+ L +  A +  VNN  +   S TM  LY +H +ED FLY+ Y+ + ++G
Sbjct:   11 FKQRKSLASRKEEVIGIKAKFPTKIPVIVERYRREKYLPLLDKTKFLVPKDLSMMQFINIIRNRMNLSATQAFYLLVNNKSLASMSLTMAELYRDHKDEDGFLYMTYASQEMFG 124
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Match: Gabarap (gamma-aminobutyric acid receptor associated protein [Source:MGI Symbol;Acc:MGI:1861742])

HSP 1 Score: 210.69 bits (535), Expect = 2.705e-69
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Match: Gabarapl1 (gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1 [Source:MGI Symbol;Acc:MGI:1914980])

HSP 1 Score: 204.142 bits (518), Expect = 8.214e-67
Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG
Sbjct:    1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Match: Gabarapl1 (gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1 [Source:MGI Symbol;Acc:MGI:1914980])

HSP 1 Score: 204.142 bits (518), Expect = 8.214e-67
Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+QYKE+H F+ R+ EGEKIRKKYPDRVPVIVEKAPKARVPDLDK+KYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNN IPPTS TMG LYE++HEED FLYVAYSDESVYG
Sbjct:    1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Match: Gabarapl2 (gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 [Source:MGI Symbol;Acc:MGI:1890602])

HSP 1 Score: 150.984 bits (380), Expect = 6.336e-46
Identity = 69/116 (59.48%), Postives = 89/116 (76.72%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MKW +KE+HS + R  E  KIR KYPDRVPVIVEK   +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+  +P +S TMG LYE+  +ED FLYVAYS E+ +G
Sbjct:    1 MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Match: Gabarap (gamma-aminobutyric acid receptor associated protein [Source:MGI Symbol;Acc:MGI:1861742])

HSP 1 Score: 103.219 bits (256), Expect = 1.735e-27
Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYE 348
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTV ++    R  ++  S    F+ +  V+  +     A+ E
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVPRWVSCTRNTMKKTS----FYTLPTVMKASMVCEAAVPE 92
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Match: sp|P60517|GBRAP_RAT (Gamma-aminobutyric acid receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Gabarap PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.892e-68
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Match: sp|Q8MK68|GBRAP_RABIT (Gamma-aminobutyric acid receptor-associated protein OS=Oryctolagus cuniculus OX=9986 GN=GABARAP PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.892e-68
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Match: sp|Q9DCD6|GBRAP_MOUSE (Gamma-aminobutyric acid receptor-associated protein OS=Mus musculus OX=10090 GN=Gabarap PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 1.892e-68
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Match: sp|O95166|GBRAP_HUMAN (Gamma-aminobutyric acid receptor-associated protein OS=Homo sapiens OX=9606 GN=GABARAP PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.892e-68
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Match: sp|Q9GJW7|GBRAP_BOVIN (Gamma-aminobutyric acid receptor-associated protein OS=Bos taurus OX=9913 GN=GABARAP PE=3 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 1.892e-68
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Match: A0A1L7H9T8 (ATG8-1 OS=Dugesia japonica OX=6161 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.455e-77
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            MKWQYKEEH FDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA
Sbjct:    1 MKWQYKEEHQFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 117
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Match: A0A1I8JGM4 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.969e-71
Identity = 108/119 (90.76%), Postives = 112/119 (94.12%), Query Frame = 1 
Query:   55 SKMKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            SKMKWQYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKARV DLDKKKYLVP+DLTVGQFYFLIRKRIQLR EDALFFFVNNVIPPTS TMGALY EHHEED FLY+AYSDESVYG 
Sbjct:    2 SKMKWQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARVGDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPPTSATMGALYSEHHEEDFFLYIAYSDESVYGC 120
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Match: A0A1I8H5P5 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig024029g1 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.089e-70
Identity = 107/119 (89.92%), Postives = 112/119 (94.12%), Query Frame = 1 
Query:   55 SKMKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            SKMKWQYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKARV DLDKKKYLVP+DLTVGQFYFLIRKRIQLR EDALFFFVNNVIPPTS TMGALY +HHEED FLY+AYSDESVYG 
Sbjct:    2 SKMKWQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARVGDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPPTSATMGALYSDHHEEDFFLYIAYSDESVYGC 120
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Match: A0A2C9K2E5 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106078713 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.993e-70
Identity = 107/117 (91.45%), Postives = 111/117 (94.87%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            MKWQYKEEH F+KRRAEGEKIRKKYPDRVPVIVEKAPKARV DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMGALY+EHHEED FLY+AYSDESVYGA
Sbjct:    1 MKWQYKEEHPFEKRRAEGEKIRKKYPDRVPVIVEKAPKARVGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGALYQEHHEEDFFLYIAYSDESVYGA 117
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Match: D7RP03 (GABA(A) receptor-associated protein OS=Haliotis diversicolor OX=36095 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.993e-70
Identity = 107/117 (91.45%), Postives = 111/117 (94.87%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            MKWQYKEEH F+KRRAEGEKIRKKYPDRVPVIVEKAPKARV DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMGALY+EHHEED FLY+AYSDESVYGA
Sbjct:    1 MKWQYKEEHPFEKRRAEGEKIRKKYPDRVPVIVEKAPKARVGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGALYQEHHEEDFFLYIAYSDESVYGA 117
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Match: gabarapb (gamma-aminobutyric acid receptor-associated protein [Source:NCBI gene;Acc:103039768])

HSP 1 Score: 213.386 bits (542), Expect = 1.824e-70
Identity = 102/116 (87.93%), Postives = 110/116 (94.83%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+QYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Match: ENSAMXT00000014245.2 (gamma-aminobutyric acid receptor-associated protein [Source:NCBI gene;Acc:103044705])

HSP 1 Score: 210.69 bits (535), Expect = 2.217e-69
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Match: ENSAMXT00000050433.1 (gamma-aminobutyric acid receptor-associated protein [Source:NCBI gene;Acc:103044705])

HSP 1 Score: 171.785 bits (434), Expect = 4.483e-54
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYE 348
            MK+ YKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+
Sbjct:    1 MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQ 96
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Match: zgc:92606 (gamma-aminobutyric acid receptor-associated protein-like 1 [Source:NCBI gene;Acc:103027931])

HSP 1 Score: 152.91 bits (385), Expect = 1.104e-46
Identity = 73/117 (62.39%), Postives = 95/117 (81.20%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            M  QY+    FD RR EGE++R K+PD++P+IVE+A ++R P+LDKKKYLVP+DLTVGQ  FLIR+R+ +R E+ALFFFV N +PP+S  +  +YEEHHEEDLFLY+ YS+ESVYGA
Sbjct:    1 MSSQYQRSVPFDVRRLEGERVRAKHPDKIPIIVERASRSRAPELDKKKYLVPSDLTVGQLCFLIRQRVSMRPEEALFFFVKNSLPPSSSPLSVVYEEHHEEDLFLYMTYSNESVYGA 117
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Match: gabarapl2 (GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336])

HSP 1 Score: 151.369 bits (381), Expect = 5.897e-46
Identity = 69/118 (58.47%), Postives = 90/118 (76.27%), Query Frame = 1 
Query:   55 SKMKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            + MKW +KE+HS + R  E  KIR KYPDRVPVIVEK   +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+  +P +S TMG LYE+  +ED FLYVAYS E+ +G
Sbjct:   16 ATMKWMFKEDHSLEHRCVESAKIRNKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 133
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Sea Lamprey
Match: gabarapl2 (GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336])

HSP 1 Score: 153.68 bits (387), Expect = 1.321e-47
Identity = 67/118 (56.78%), Postives = 93/118 (78.81%), Query Frame = 1 
Query:   55 SKMKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            + MKW +KE+HSF+ RRAE  KIR KYPDRVPV+VEK P +++ D+DK+KYLVP D+TV QF ++IRKR+QL S+ A+F F++  +P +S ++G LYE+  +ED FLYVAYS E+ +G
Sbjct:   12 AAMKWMFKEDHSFEHRRAESNKIRNKYPDRVPVVVEKVPGSQIGDIDKRKYLVPADITVAQFMWIIRKRVQLPSDKAIFLFIDKTVPQSSASIGQLYEDQKDEDGFLYVAYSGENTFG 129
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Sea Lamprey
Match: map1lc3a (microtubule-associated protein 1 light chain 3 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2232])

HSP 1 Score: 76.2554 bits (186), Expect = 7.586e-18
Identity = 37/114 (32.46%), Postives = 70/114 (61.40%), Query Frame = 1 
Query:   73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEK-APKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            +K+  SF +R  + E IR ++P+++PVI+E+   + ++P LDK K+LVP+ + + +   +IR+R+QL    A F  VN   +   +  +  +YE+  ++D FLY+ Y+ +  +G
Sbjct:    7 FKQRRSFTERVKDVELIRSQHPNKIPVIIERYRGEKQLPMLDKTKFLVPDHVNMSELVKIIRRRLQLNPNQAFFLLVNQRSMVSVAAPICEVYEQERDDDGFLYMVYASQETFG 120
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Sea Lamprey
Match: map1lc3a (microtubule-associated protein 1 light chain 3 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2232])

HSP 1 Score: 75.485 bits (184), Expect = 1.776e-17
Identity = 35/111 (31.53%), Postives = 71/111 (63.96%), Query Frame = 1 
Query:   85 HSFDKRRAEGEKIRKKYPDRVPVIVEK-APKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            H+ +++R + E+IR ++P+++PVI+E+   + ++P LDK K+LVP+ + + +   ++R+R+QL    A F  VN   +   +  +  +YE+  +ED FLY+ Y+ +  +G+
Sbjct:   16 HAVERQR-DVEQIRSQHPNKIPVIIERYRGEKQLPMLDKTKFLVPDHVNISELVKILRRRLQLSPNQAFFLLVNQRSMVSVAVPISQVYEQEKDEDGFLYMVYASQETFGS 125
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Yeast
Match: ATG8 (Component of autophagosomes and Cvt vesicles; regulator of Atg1p, targets it to autophagosomes; binds the Atg1p-Atg13p complex, triggering its vacuolar degradation; unique ubiquitin-like protein whose conjugation target is lipid phosphatidylethanolamine (PE); Atg8p-PE is anchored to membranes, is involved in phagophore expansion, and may mediate membrane fusion during autophagosome formation; deconjugation of Atg8p-PE is required for efficient autophagosome biogenesis [Source:SGD;Acc:S000000174])

HSP 1 Score: 140.198 bits (352), Expect = 1.190e-42
Identity = 63/116 (54.31%), Postives = 89/116 (76.72%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK  +K E+ F+KR+AE E+I  ++ +R+PVI EKA K+ +P++DK+KYLVP DLTVGQF ++IRKRI L  E A+F FVN+ +PPT+  M A+Y+EH ++D FLYV YS E+ +G
Sbjct:    1 MKSTFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Nematostella
Match: EDO42340 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S1K4])

HSP 1 Score: 215.698 bits (548), Expect = 7.184e-72
Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            MKW+YKEEH F+KRRAEGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDESVYG 
Sbjct:    1 MKWEYKEEHPFEKRRAEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGC 117
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Nematostella
Match: EDO45913 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRA1])

HSP 1 Score: 164.851 bits (416), Expect = 7.936e-52
Identity = 74/116 (63.79%), Postives = 93/116 (80.17%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MKW +KEEHS D R  E  KIR KYPDR+PV+VEKAPK+ + D+DK+K+LVP+DLTV QF ++IRKRIQL  E A+F FVN V+P TS TMG++YEEH +ED FLY+AYS E+ +G
Sbjct:    1 MKWAFKEEHSLDSRCQESSKIRLKYPDRIPVVVEKAPKSTIQDIDKRKFLVPSDLTVAQFMYIIRKRIQLPPEKAMFLFVNKVLPTTSSTMGSIYEEHKDEDGFLYIAYSGENTFG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Nematostella
Match: EDO43061 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZW6])

HSP 1 Score: 98.5969 bits (244), Expect = 8.212e-26
Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 1 
Query:   73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNN-VIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            +K+  SF  RR E   IR K+P ++PVIVE+  K + +P LDK K+LVP +LT+ QF  +IR R+ L S  A +  VNN  +   S TM  LY E  +ED FLY+ Y+ + ++G+
Sbjct:   14 FKQRKSFVSRRDEVAGIRAKFPSKIPVIVERYHKEKDLPLLDKTKFLVPQELTMSQFVTIIRNRMSLSSTQAFYLIVNNKSLASMSMTMAELYREEKDEDGFLYMVYASQEMFGS 128
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Nematostella
Match: EDO35774 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKK3])

HSP 1 Score: 87.0409 bits (214), Expect = 8.011e-22
Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1 
Query:  100 RRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVN--NVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            RR + E I K+YPD++PVIVE+    + +P LDK KYLVP DLT+     +IRKR+QL    A F  VN  N++   S T+G +Y +  +ED FLY+ ++ +  +G
Sbjct:    5 RRRDSETITKQYPDKIPVIVERLKTEKNLPILDKIKYLVPGDLTMSSLASIIRKRLQLGPTQAFFLLVNEKNMV-SISTTVGEVYRDERDEDGFLYMVFASQESFG 109
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Match: gabarapb (GABA type A receptor-associated protein [Source:NCBI gene;Acc:101158482])

HSP 1 Score: 207.994 bits (528), Expect = 1.059e-67
Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDES 399
            MK+QYKEEH F+KRR+EGEKIRKKYPDRVPVIVEKAPKAR+ DLDKKKYLVP+DLTVGQFYFLIRKRI LR+EDALFFFVNNVIPPTS TMG LY+EHHEED FLY+AYSDES
Sbjct:    1 MKFQYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDES 113
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Match: zgc:92606 (gamma-aminobutyric acid receptor-associated protein-like 1 [Source:NCBI gene;Acc:101170049])

HSP 1 Score: 173.711 bits (439), Expect = 6.385e-55
Identity = 77/117 (65.81%), Postives = 98/117 (83.76%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            M  QY+     + RRAEGE++R K+PD++P+IVE+APK+R P+LDKKKYLVP+DLTVGQ  FLIR+R+ LR E+ALFFFVNN +PP+SF + A+YEEHH+EDLFLY+ YS ESVYGA
Sbjct:    1 MGSQYQRSVPLEVRRAEGERVRAKHPDKIPIIVERAPKSRAPELDKKKYLVPSDLTVGQLCFLIRQRVSLRPEEALFFFVNNSLPPSSFPLSAVYEEHHQEDLFLYMTYSTESVYGA 117
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Match: GABARAPL2 (gamma-aminobutyric acid receptor-associated protein-like 2 [Source:NCBI gene;Acc:101171396])

HSP 1 Score: 149.058 bits (375), Expect = 2.952e-45
Identity = 68/116 (58.62%), Postives = 89/116 (76.72%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MKW +KE+HS + R  E  KIR KYPDRVPVIVEK   +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+  +P +S TMG LY++  +ED FLYVAYS E+ +G
Sbjct:    1 MKWTFKEDHSVEHRCIESAKIRSKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSITMGQLYDKEKDEDGFLYVAYSGENTFG 116
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Match: ENSORLT00000018992.2 (gamma-aminobutyric acid receptor-associated protein-like 2 [Source:NCBI gene;Acc:101168456])

HSP 1 Score: 113.62 bits (283), Expect = 7.377e-32
Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPT 321
            MKW +KE+HS + R  E  KIR KYPDRVPVIVEK   +++ D+DK+KYLVP+D+TV QF ++IRKRIQL SE A+F FV+  +P +
Sbjct:    1 MKWMFKEDHSLEHRCVESAKIRNKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQS 87
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Match: map1lc3c (microtubule associated protein 1 light chain 3 gamma [Source:NCBI gene;Acc:101162187])

HSP 1 Score: 97.0561 bits (240), Expect = 5.150e-25
Identity = 45/114 (39.47%), Postives = 75/114 (65.79%), Query Frame = 1 
Query:   73 YKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNV-IPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            +K+  SF  R+ E   I+ K+P+++PVI+E+  K R +P LDK K+LVP++LT+ QF  +IR R+ L    A +  +N+  +P  S TM  +Y++H +ED FLY+ Y+ + ++G
Sbjct:   14 FKQRKSFATRKQEVAGIKSKFPNKIPVIIERYDKERFLPPLDKTKFLVPHELTMTQFVTIIRNRMALLPSQAFYLLINSSGLPSMSLTMAQVYKDHQDEDGFLYMTYASQEMFG 127
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Planmine SMEST
Match: SMESG000026465.1 (SMESG000026465.1)

HSP 1 Score: 241.121 bits (614), Expect = 1.462e-81
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 411
            MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA
Sbjct:    1 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYGA 117
[Close]
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Planmine SMEST
Match: SMESG000033716.1 (SMESG000033716.1)

HSP 1 Score: 136.346 bits (342), Expect = 2.015e-40
Identity = 62/116 (53.45%), Postives = 86/116 (74.14%), Query Frame = 1 
Query:   61 MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYLVPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHEEDLFLYVAYSDESVYG 408
            MK++++ EHSFDKR  + +KI+ KYP R+P+IVEK P +R+ ++DK K+LVP D+TV QF +++RKRI L S+ ALF FV   +P  S TMG LYE+  +ED FLY AYS E+ +G
Sbjct:    1 MKFKFQVEHSFDKRLEDSQKIKAKYPQRIPIIVEKHPSSRLIEIDKHKFLVPADITVAQFMWILRKRIDLSSDKALFLFVGKSVPQASMTMGQLYEDFRDEDGFLYAAYSGENSFG 116
The following BLAST results are available for this feature:
BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
GABARAP3.941e-6987.07GABA type A receptor-associated protein [Source:HG... [more]
GABARAPL11.196e-6685.34GABA type A receptor associated protein like 1 [So... [more]
GABARAPL11.196e-6685.34GABA type A receptor associated protein like 1 [So... [more]
GABARAP1.074e-5386.46GABA type A receptor-associated protein [Source:HG... [more]
GABARAPL11.558e-5285.42GABA type A receptor associated protein like 1 [So... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
lgg-12.671e-6782.05pep chromosome:WBcel235:II:6346960:6347719:-1 gene... [more]
lgg-28.354e-1634.21pep chromosome:WBcel235:IV:10934201:10935903:-1 ge... [more]
lgg-28.354e-1634.21pep chromosome:WBcel235:IV:10934186:10935914:-1 ge... [more]
lgg-22.604e-732.43pep chromosome:WBcel235:IV:10934201:10935825:-1 ge... [more]
lgg-22.604e-732.43pep chromosome:WBcel235:IV:10934201:10935825:-1 ge... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Atg8a7.065e-7086.21gene:FBgn0052672 transcript:FBtr0071498[more]
Atg8b5.853e-6378.45gene:FBgn0038539 transcript:FBtr0346730[more]
Atg8b5.853e-6378.45gene:FBgn0038539 transcript:FBtr0083533[more]
Atg8a4.365e-5080.21gene:FBgn0052672 transcript:FBtr0346376[more]
Atg8a5.516e-4987.21gene:FBgn0052672 transcript:FBtr0346375[more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
gabarapb3.655e-7384.55GABA(A) receptor-associated protein b [Source:ZFIN... [more]
gabarapa1.948e-6987.07GABA(A) receptor-associated protein a [Source:ZFIN... [more]
gabarapa1.948e-6987.07GABA(A) receptor-associated protein a [Source:ZFIN... [more]
gabarapb5.617e-6987.72GABA(A) receptor-associated protein b [Source:ZFIN... [more]
zgc:926065.779e-4762.39zgc:92606 [Source:ZFIN;Acc:ZDB-GENE-040718-462][more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
gabarapl11.085e-6685.34GABA(A) receptor-associated protein like 1 [Source... [more]
gabarapl11.085e-6685.34GABA(A) receptor-associated protein like 1 [Source... [more]
or3a16.521e-4658.97olfactory receptor family 3 subfamily A member 1 [... [more]
or3a16.949e-3959.62olfactory receptor family 3 subfamily A member 1 [... [more]
map1lc3c6.532e-2339.47microtubule associated protein 1 light chain 3 gam... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Gabarap2.705e-6987.07gamma-aminobutyric acid receptor associated protei... [more]
Gabarapl18.214e-6785.34gamma-aminobutyric acid (GABA) A receptor-associat... [more]
Gabarapl18.214e-6785.34gamma-aminobutyric acid (GABA) A receptor-associat... [more]
Gabarapl26.336e-4659.48gamma-aminobutyric acid (GABA) A receptor-associat... [more]
Gabarap1.735e-2757.29gamma-aminobutyric acid receptor associated protei... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P60517|GBRAP_RAT1.892e-6887.07Gamma-aminobutyric acid receptor-associated protei... [more]
sp|Q8MK68|GBRAP_RABIT1.892e-6887.07Gamma-aminobutyric acid receptor-associated protei... [more]
sp|Q9DCD6|GBRAP_MOUSE1.892e-6887.07Gamma-aminobutyric acid receptor-associated protei... [more]
sp|O95166|GBRAP_HUMAN1.892e-6887.07Gamma-aminobutyric acid receptor-associated protei... [more]
sp|Q9GJW7|GBRAP_BOVIN1.892e-6887.07Gamma-aminobutyric acid receptor-associated protei... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1L7H9T82.455e-7799.15ATG8-1 OS=Dugesia japonica OX=6161 PE=2 SV=1[more]
A0A1I8JGM42.969e-7190.76Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1I8H5P51.089e-7089.92Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A2C9K2E53.993e-7091.45Uncharacterized protein OS=Biomphalaria glabrata O... [more]
D7RP033.993e-7091.45GABA(A) receptor-associated protein OS=Haliotis di... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
gabarapb1.824e-7087.93gamma-aminobutyric acid receptor-associated protei... [more]
ENSAMXT00000014245.22.217e-6987.07gamma-aminobutyric acid receptor-associated protei... [more]
ENSAMXT00000050433.14.483e-5486.46gamma-aminobutyric acid receptor-associated protei... [more]
zgc:926061.104e-4662.39gamma-aminobutyric acid receptor-associated protei... [more]
gabarapl25.897e-4658.47GABA(A) receptor-associated protein like 2 [Source... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
gabarapl21.321e-4756.78GABA(A) receptor-associated protein like 2 [Source... [more]
map1lc3a7.586e-1832.46microtubule-associated protein 1 light chain 3 alp... [more]
map1lc3a1.776e-1731.53microtubule-associated protein 1 light chain 3 alp... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
ATG81.190e-4254.31Component of autophagosomes and Cvt vesicles; regu... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4
Match NameE-valueIdentityDescription
EDO423407.184e-7288.03Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO459137.936e-5263.79Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO430618.212e-2643.48Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO357748.011e-2243.40Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
gabarapb1.059e-6787.61GABA type A receptor-associated protein [Source:NC... [more]
zgc:926066.385e-5565.81gamma-aminobutyric acid receptor-associated protei... [more]
GABARAPL22.952e-4558.62gamma-aminobutyric acid receptor-associated protei... [more]
ENSORLT00000018992.27.377e-3258.62gamma-aminobutyric acid receptor-associated protei... [more]
map1lc3c5.150e-2539.47microtubule associated protein 1 light chain 3 gam... [more]
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BLAST of Gamma-aminobutyric acid receptor-associated protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000026465.11.462e-81100.00SMESG000026465.1[more]
SMESG000033716.12.015e-4053.45SMESG000033716.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30002428 ID=SMED30002428|Name=Gamma-aminobutyric acid receptor-associated protein|organism=Schmidtea mediterranea sexual|type=transcript|length=813bp
CGATCTTTTAAATATATTAATTGAAATTATTATCATCTGATATTATTAGT
AAAGTCTAAAATGAAGTGGCAATATAAAGAAGAACATTCTTTTGACAAAA
GACGGGCCGAAGGTGAAAAGATACGCAAAAAATATCCAGATAGAGTTCCT
GTAATTGTTGAAAAAGCTCCTAAAGCCCGAGTTCCGGATTTAGATAAGAA
AAAATATCTTGTCCCTAATGATTTAACTGTTGGACAATTTTACTTTTTGA
TAAGAAAGCGTATTCAATTGCGTTCAGAAGATGCTTTATTCTTTTTCGTT
AACAACGTTATTCCGCCAACAAGTTTTACGATGGGTGCTCTATATGAGGA
GCATCACGAAGAGGATTTGTTTCTATATGTTGCGTACAGTGATGAAAGTG
TATATGGAGCATAAATAATTCATTTATCTTTTCCATGTTGCTTTCTGAAA
GACTAAAATTAGTGTAGTTATATCATTTATAAATCTAATTTAGAAAATTA
CTTTTAAAGGATAACATTCATTGTCATTTATTTTACATAATTAAATCCTG
TTTGATATTTTTCGATTCAAACTATGAATGATACTAAATGTGCTATTTAG
ATTTATTTTTTCTTTATAAATAAAATATATTATTTATGAATTTCCTATTT
TTTTGTGATTAATTAGTAACTCGTTAACAGTTGTGACAATGATTTTTAAG
CGAAATATGTATTGTAATGTTATGGTGAGTATTATTTAATAGATTTTATA
ATTTGATGTTCTCTAATTTTATGAAATTCATGGCAAATAAAAGATCTTTC
TAATGAAAAAAAA
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protein sequence of SMED30002428-orf-1

>SMED30002428-orf-1 ID=SMED30002428-orf-1|Name=SMED30002428-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=118bp
MKWQYKEEHSFDKRRAEGEKIRKKYPDRVPVIVEKAPKARVPDLDKKKYL
VPNDLTVGQFYFLIRKRIQLRSEDALFFFVNNVIPPTSFTMGALYEEHHE
EDLFLYVAYSDESVYGA*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000020protonephridia
PLANA:0000034epidermis
PLANA:0000070intestinal phagocyte
PLANA:0000099neuron
PLANA:0000101muscle cell
PLANA:0002032epidermal cell
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR004241Atg8-like
IPR029071Ubiquitin-like_domsf
Vocabulary: biological process
TermDefinition
GO:0006914autophagy
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004241Autophagy protein Atg8 ubiquitin-likePFAMPF02991Atg8coord: 13..116
e-value: 4.0E-49
score: 165.1
IPR004241Autophagy protein Atg8 ubiquitin-likePANTHERPTHR10969MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATEDcoord: 1..116
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 1..117
e-value: 1.5E-54
score: 185.0
NoneNo IPR availablePANTHERPTHR10969:SF33GABA(A) RECEPTOR-ASSOCIATED PROTEIN Bcoord: 1..116
NoneNo IPR availableCDDcd16127Ubl_ATG8_GABARAP_likecoord: 5..111
e-value: 1.49511E-72
score: 209.267
IPR029071Ubiquitin-like domain superfamilySUPERFAMILYSSF54236Ubiquitin-likecoord: 1..116