40S ribosomal protein S15

Overview
Name40S ribosomal protein S15
Smed IDSMED30002392
Length (bp)531
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 40S ribosomal protein S15 (SMED30002392) t-SNE clustered cells

Violin plots show distribution of expression levels for 40S ribosomal protein S15 (SMED30002392) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 40S ribosomal protein S15 (SMED30002392) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 40S ribosomal protein S15 (SMED30002392) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30002392

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 14

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30002392SMESG000015520.1 SmedASXL_003976SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
pharynxSMED30002392SMESG000015520.1 dd_Smed_v4_201_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30002392SMESG000015520.1 dd_Smed_v4_201_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30002392SMESG000015520.1 dd_Smed_v4_201_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30002392SMESG000015520.1 dd_Smed_v4_201_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30002392SMESG000015520.1 dd_Smed_v4_201_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30002392SMESG000015520.1 dd_Smed_v4_201_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30002392SMESG000015520.1 dd_Smed_v4_201_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30002392SMESG000015520.1 dd_Smed_v4_201_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30002392SMESG000015520.1 dd_Smed_v4_201_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30002392SMESG000015520.1 dd_Smed_v4_201_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30002392SMESG000015520.1 Contig42344newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30002392SMESG000015520.1 Contig42344uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
neoblastSMED30002392SMESG000015520.1 dd_Smed_v6_201_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Human
Match: RPS15 (ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388])

HSP 1 Score: 194.126 bits (492), Expect = 9.073e-64
Identity = 107/144 (74.31%), Postives = 125/144 (86.81%), Query Frame = 2 
Query:   65 KMDASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +++  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    3 EVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Human
Match: RPS15 (ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388])

HSP 1 Score: 193.741 bits (491), Expect = 1.581e-63
Identity = 107/144 (74.31%), Postives = 125/144 (86.81%), Query Frame = 2 
Query:   65 KMDASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +++  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   10 EVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 152
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Human
Match: RPS15 (ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388])

HSP 1 Score: 181.415 bits (459), Expect = 9.055e-59
Identity = 103/144 (71.53%), Postives = 122/144 (84.72%), Query Frame = 2 
Query:   65 KMDASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +++  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN    +PEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    3 EVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFN----QPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 141
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Human
Match: RPS15 (ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388])

HSP 1 Score: 161.384 bits (407), Expect = 3.719e-51
Identity = 81/95 (85.26%), Postives = 87/95 (91.58%), Query Frame = 2 
Query:  212 QHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            QH +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   26 QH-SLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 118
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Human
Match: RPS15 (ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388])

HSP 1 Score: 161.384 bits (407), Expect = 3.719e-51
Identity = 81/95 (85.26%), Postives = 87/95 (91.58%), Query Frame = 2 
Query:  212 QHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            QH +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   26 QH-SLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 118
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Celegans
Match: rps-15 (40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0])

HSP 1 Score: 162.925 bits (411), Expect = 1.031e-51
Identity = 95/139 (68.35%), Postives = 119/139 (85.61%), Query Frame = 2 
Query:   80 KKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            KKR F+KF YRG+DLDQLL+M+ +Q ++L+  R+RRRL RGLKR+H  L+ K+++AKKA   + EKP+ VKTHLR+MIILPE+VG ++G+YNGK FN  EIKPEMIG YLGEF+++YKPVKHGRPGIGATHSSRFIPLK
Sbjct:   14 KKRTFRKFMYRGVDLDQLLDMSREQFTKLLPCRMRRRLDRGLKRKHLALIAKVQKAKKAAGVL-EKPATVKTHLRDMIILPELVGGVIGIYNGKVFNQTEIKPEMIGFYLGEFAISYKPVKHGRPGIGATHSSRFIPLK 151
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Fly
Match: RpS15 (gene:FBgn0034138 transcript:FBtr0087123)

HSP 1 Score: 169.088 bits (427), Expect = 4.539e-54
Identity = 95/130 (73.08%), Postives = 108/130 (83.08%), Query Frame = 2 
Query:  107 YRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            YRG+DLDQLL+M   Q  EL+ +R RRR SRGLKR+   L+KKLR+AKK      EKP +VKTHLRNMII+PEM GS++GVYNGK F  VE+KPEMIGHYLGEF+LTYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   20 YRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKEAPP-NEKPEIVKTHLRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSSRFIPLK 148
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Fly
Match: RpS15 (gene:FBgn0034138 transcript:FBtr0087124)

HSP 1 Score: 168.703 bits (426), Expect = 6.103e-54
Identity = 95/130 (73.08%), Postives = 108/130 (83.08%), Query Frame = 2 
Query:  107 YRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            YRG+DLDQLL+M   Q  EL+ +R RRR SRGLKR+   L+KKLR+AKK      EKP +VKTHLRNMII+PEM GS++GVYNGK F  VE+KPEMIGHYLGEF+LTYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   19 YRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKEAPP-NEKPEIVKTHLRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSSRFIPLK 147
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Zebrafish
Match: rps15 (ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092])

HSP 1 Score: 194.897 bits (494), Expect = 3.060e-64
Identity = 106/142 (74.65%), Postives = 124/142 (87.32%), Query Frame = 2 
Query:   71 DASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+ ++LLK+LR+AKK    + EKP VVKTHLR+M+ILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    5 EQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQQSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMVILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Zebrafish
Match: rps15 (ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092])

HSP 1 Score: 194.126 bits (492), Expect = 6.179e-64
Identity = 106/139 (76.26%), Postives = 123/139 (88.49%), Query Frame = 2 
Query:   80 KKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+ ++LLK+LR+AKK    + EKP VVKTHLR+M+ILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    2 KKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQQSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMVILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 139
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Xenopus
Match: ugt3a2 (UDP glycosyltransferase 3 family, polypeptide A2 [Source:Xenbase;Acc:XB-GENE-5824772])

HSP 1 Score: 179.104 bits (453), Expect = 8.221e-58
Identity = 99/130 (76.15%), Postives = 115/130 (88.46%), Query Frame = 2 
Query:  107 YRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP V+KTHLR+MIILPEMVGSMVGVYNGK+FN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   17 YRGVDLDQLLDMSYEQIMQLYCARQRRRLNRGLRRKQNSLLKRLRKAKKEAPPM-EKPEVIKTHLRDMIILPEMVGSMVGVYNGKSFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Xenopus
Match: ugt3a2 (UDP glycosyltransferase 3 family, polypeptide A2 [Source:Xenbase;Acc:XB-GENE-5824772])

HSP 1 Score: 178.718 bits (452), Expect = 1.012e-57
Identity = 99/130 (76.15%), Postives = 115/130 (88.46%), Query Frame = 2 
Query:  107 YRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP V+KTHLR+MIILPEMVGSMVGVYNGK+FN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   17 YRGVDLDQLLDMSYEQIMQLYCARQRRRLNRGLRRKQNSLLKRLRKAKKEAPPM-EKPEVIKTHLRDMIILPEMVGSMVGVYNGKSFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Xenopus
Match: ugt3a2 (UDP glycosyltransferase 3 family, polypeptide A2 [Source:Xenbase;Acc:XB-GENE-5824772])

HSP 1 Score: 178.718 bits (452), Expect = 1.012e-57
Identity = 99/130 (76.15%), Postives = 115/130 (88.46%), Query Frame = 2 
Query:  107 YRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP V+KTHLR+MIILPEMVGSMVGVYNGK+FN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   17 YRGVDLDQLLDMSYEQIMQLYCARQRRRLNRGLRRKQNSLLKRLRKAKKEAPPM-EKPEVIKTHLRDMIILPEMVGSMVGVYNGKSFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Xenopus
Match: ugt3a2 (UDP glycosyltransferase 3 family, polypeptide A2 [Source:Xenbase;Acc:XB-GENE-5824772])

HSP 1 Score: 178.718 bits (452), Expect = 1.272e-57
Identity = 99/130 (76.15%), Postives = 115/130 (88.46%), Query Frame = 2 
Query:  107 YRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP V+KTHLR+MIILPEMVGSMVGVYNGK+FN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   18 YRGVDLDQLLDMSYEQIMQLYCARQRRRLNRGLRRKQNSLLKRLRKAKKEAPPM-EKPEVIKTHLRDMIILPEMVGSMVGVYNGKSFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 146
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Mouse
Match: Rps15 (ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117])

HSP 1 Score: 194.126 bits (492), Expect = 6.229e-64
Identity = 107/144 (74.31%), Postives = 125/144 (86.81%), Query Frame = 2 
Query:   65 KMDASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +++  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    3 EVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Mouse
Match: Rps15 (ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117])

HSP 1 Score: 161.384 bits (407), Expect = 2.553e-51
Identity = 81/95 (85.26%), Postives = 87/95 (91.58%), Query Frame = 2 
Query:  212 QHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            QH +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   26 QH-SLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 118
[Close]
BLAST of 40S ribosomal protein S15 vs. UniProt/SwissProt
Match: sp|P62845|RS15_RAT (40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 4.357e-63
Identity = 107/144 (74.31%), Postives = 125/144 (86.81%), Query Frame = 2 
Query:   65 KMDASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +++  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    3 EVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. UniProt/SwissProt
Match: sp|Q5RDI7|RS15_PONAB (40S ribosomal protein S15 OS=Pongo abelii OX=9601 GN=RPS15 PE=2 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 4.357e-63
Identity = 107/144 (74.31%), Postives = 125/144 (86.81%), Query Frame = 2 
Query:   65 KMDASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +++  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    3 EVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. UniProt/SwissProt
Match: sp|P62844|RS15_PIG (40S ribosomal protein S15 OS=Sus scrofa OX=9823 GN=RPS15 PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 4.357e-63
Identity = 107/144 (74.31%), Postives = 125/144 (86.81%), Query Frame = 2 
Query:   65 KMDASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +++  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    3 EVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. UniProt/SwissProt
Match: sp|P62843|RS15_MOUSE (40S ribosomal protein S15 OS=Mus musculus OX=10090 GN=Rps15 PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 4.357e-63
Identity = 107/144 (74.31%), Postives = 125/144 (86.81%), Query Frame = 2 
Query:   65 KMDASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +++  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    3 EVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. UniProt/SwissProt
Match: sp|P62842|RS15_MESAU (40S ribosomal protein S15 OS=Mesocricetus auratus OX=10036 GN=RPS15 PE=2 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 4.357e-63
Identity = 107/144 (74.31%), Postives = 125/144 (86.81%), Query Frame = 2 
Query:   65 KMDASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +++  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+  +LLK+LR+AKK    + EKP VVKTHLR+MIILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    3 EVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. TrEMBL
Match: A0A267ENC9 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig001018g10 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.389e-63
Identity = 108/142 (76.06%), Postives = 126/142 (88.73%), Query Frame = 2 
Query:   71 DASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            D  K R F+K+YYRG++LDQLL+M+I Q SEL   RIRRRL+RGLKR+H++LLK+LR+AKK    +GEKP+ VKTHLRNM +LPEMVGS+VGVYNGKTFN VE+KP+MIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    4 DQKKSRTFRKYYYRGVELDQLLDMSIDQFSELATCRIRRRLNRGLKRKHQSLLKRLRKAKKECV-VGEKPATVKTHLRNMPVLPEMVGSIVGVYNGKTFNAVEVKPDMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 144
[Close]
BLAST of 40S ribosomal protein S15 vs. TrEMBL
Match: A0A5K3ELT8 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 7.620e-63
Identity = 102/142 (71.83%), Postives = 126/142 (88.73%), Query Frame = 2 
Query:   71 DASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +  K+R F+K++YRG+DLDQLL+MN+ Q +EL  AR RRR+ RGL++ H+TLLKKLR++KK    +GEKP+VVKTHLRNM++ PEMVGS+VGVYNGK++N VEI+PEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    5 ETKKRRTFRKYFYRGVDLDQLLDMNMDQIAELFDARKRRRVRRGLRQNHKTLLKKLRESKKKCP-VGEKPAVVKTHLRNMVVFPEMVGSIVGVYNGKSYNQVEIRPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. TrEMBL
Match: A0A068WD70 (40s ribosomal protein s15 OS=Echinococcus granulosus OX=6210 GN=EgrG_000876600 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 9.485e-63
Identity = 104/139 (74.82%), Postives = 124/139 (89.21%), Query Frame = 2 
Query:   80 KKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            K+R F+K++YRG+DLDQLL+M++ Q +EL  AR RRR+ RGL  +H+TLL+KLR++KK    IGEKP+VVKTHLRNMII PEMVGS+VG+YNGKTFN VEI+PEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    8 KRRTFRKYFYRGVDLDQLLDMSVDQLAELYSARKRRRIRRGLGTKHKTLLQKLRKSKKN-CPIGEKPAVVKTHLRNMIIFPEMVGSVVGIYNGKTFNQVEIRPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. TrEMBL
Match: A0A068YFL5 (40S ribosomal protein S15 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000876600 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.405e-62
Identity = 103/142 (72.54%), Postives = 125/142 (88.03%), Query Frame = 2 
Query:   71 DASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +  K+R F+K++YRG+DLDQLL+M++ Q +EL  AR RRR+ RGL  +H+TLL+KLR++KK    IGEKP+VVKTHLRNMI+ PEMVGS+VG+YNGKTFN VEI+PEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    8 EIKKRRTFRKYFYRGVDLDQLLDMSVDQLAELYSARKRRRIRRGLGTKHKTLLQKLRKSKKN-CPIGEKPAVVKTHLRNMIVFPEMVGSVVGIYNGKTFNQVEIRPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 148
[Close]
BLAST of 40S ribosomal protein S15 vs. TrEMBL
Match: W6UXX6 (40S ribosomal protein S15-B OS=Echinococcus granulosus OX=6210 GN=EGR_06716 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.471e-62
Identity = 104/139 (74.82%), Postives = 124/139 (89.21%), Query Frame = 2 
Query:   80 KKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            K+R F+K++YRG+DLDQLL+M++ Q +EL  AR RRR+ RGL  +H+TLL+KLR++KK    IGEKP+VVKTHLRNMII PEMVGS+VG+YNGKTFN VEI+PEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   50 KRRTFRKYFYRGVDLDQLLDMSVDQLAELYSARKRRRIRRGLGTKHKTLLQKLRKSKKN-CPIGEKPAVVKTHLRNMIIFPEMVGSVVGIYNGKTFNQVEIRPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 187
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Cavefish
Match: rps15 (ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092])

HSP 1 Score: 190.274 bits (482), Expect = 1.677e-62
Identity = 106/143 (74.13%), Postives = 125/143 (87.41%), Query Frame = 2 
Query:   68 MDASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            ++  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+ ++LLK+LR+AKK    + EKP VVKTHLR+M+ILPEMVGSMVGVYNGKTFN VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    4 VEQKKKRTFRKFTYRGVDLDQLLDMS-EQLMQLYCARQRRRLNRGLRRKQQSLLKRLRKAKKEAPPM-EKPEVVKTHLRDMVILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 144
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Sea Lamprey
Match: rps15 (ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092])

HSP 1 Score: 192.2 bits (487), Expect = 5.967e-64
Identity = 102/142 (71.83%), Postives = 122/142 (85.92%), Query Frame = 2 
Query:   71 DASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            D  KKR F+K+ YRG+DLDQLL+M+ +Q  ++  AR RRR +RGL+R+  +LLK+LR+AKK    + EKP VVKTHLR+M+I+PEMVGSMVGVYNGKTFN VE+KPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    6 DQKKKRTFRKYTYRGVDLDQLLDMSNEQLMQMFSARQRRRYNRGLRRKQLSLLKRLRKAKKDAPPL-EKPEVVKTHLRDMVIIPEMVGSMVGVYNGKTFNQVEVKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 146
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Yeast
Match: RPS15 (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S15 and bacterial S19 [Source:SGD;Acc:S000005400])

HSP 1 Score: 153.295 bits (386), Expect = 8.289e-49
Identity = 86/140 (61.43%), Postives = 110/140 (78.57%), Query Frame = 2 
Query:   77 SKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +KKRVFK   YRG+DL++LLEM+ +   +L  AR+RRR +RG+  +    +KKLR AK A  E  EKP+ V+TH+RNMII+PEM+GS+VG+YNGK FN VEI+PEM+GHYLGEFS+TY PV+HGR   GAT +SRFIPLK
Sbjct:    7 AKKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAAPE-NEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGR--AGAT-TSRFIPLK 142
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Yeast
Match: RSM19 (Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S19 ribosomal protein [Source:SGD;Acc:S000005320])

HSP 1 Score: 48.521 bits (114), Expect = 9.438e-9
Identity = 24/59 (40.68%), Postives = 36/59 (61.02%), Query Frame = 2 
Query:  257 ITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYK 433
            I E   K + ++T+ R   ILP+ VG    ++NGK +  +EI  +M+GH LGEF+ T K
Sbjct:   23 IREAMTKGTPIRTNARAATILPQFVGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Nematostella
Match: EDO45767 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RS93])

HSP 1 Score: 184.882 bits (468), Expect = 9.986e-61
Identity = 102/139 (73.38%), Postives = 119/139 (85.61%), Query Frame = 2 
Query:   80 KKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +KR F+KF YRG+DLDQLL+++ +Q  ELV  R RRR +RGLKR+   L+K+LR+AKK    + EKP VVKTHLRNMII+PEM+GS+VGVYNGKTF  VEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   12 RKRTFRKFTYRGVDLDQLLDLSHEQLMELVCCRQRRRFTRGLKRKPLALMKRLRKAKKEAAPM-EKPEVVKTHLRNMIIVPEMIGSVVGVYNGKTFTQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 149
[Close]
BLAST of 40S ribosomal protein S15 vs. Ensembl Medaka
Match: rps15 (ribosomal protein S15 [Source:NCBI gene;Acc:101165424])

HSP 1 Score: 192.2 bits (487), Expect = 2.990e-63
Identity = 106/142 (74.65%), Postives = 123/142 (86.62%), Query Frame = 2 
Query:   71 DASKKRVFKKFYYRGIDLDQLLEMNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            +  KKR F+KF YRG+DLDQLL+M+ +Q  +L  AR RRRL+RGL+R+ +TLLK+LR+AKK    + EKP VVK+HLR+MIILPEMVGSMVGVYNGKTFN VEIKPEM GHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    5 EIKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYCARQRRRLNRGLRRKQQTLLKRLRKAKKEAPPM-EKPEVVKSHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMCGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of 40S ribosomal protein S15 vs. Planmine SMEST
Match: SMESG000015520.1 (SMESG000015520.1)

HSP 1 Score: 206.838 bits (525), Expect = 1.931e-69
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 2 
Query:  140 MNIQQCSEXXXXXXXXXXXXXXXXQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 496
            MNIQQCSELVRARIRRRLSRGLKRQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    1 MNIQQCSELVRARIRRRLSRGLKRQHETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTFNHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK 119
The following BLAST results are available for this feature:
BLAST of 40S ribosomal protein S15 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RPS159.073e-6474.31ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC... [more]
RPS151.581e-6374.31ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC... [more]
RPS159.055e-5971.53ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC... [more]
RPS153.719e-5185.26ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC... [more]
RPS153.719e-5185.26ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC... [more]
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BLAST of 40S ribosomal protein S15 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps-151.031e-5168.3540S ribosomal protein S15 [Source:UniProtKB/Swiss... [more]
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BLAST of 40S ribosomal protein S15 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
RpS154.539e-5473.08gene:FBgn0034138 transcript:FBtr0087123[more]
RpS156.103e-5473.08gene:FBgn0034138 transcript:FBtr0087124[more]
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BLAST of 40S ribosomal protein S15 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rps153.060e-6474.65ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-03... [more]
rps156.179e-6476.26ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-03... [more]
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BLAST of 40S ribosomal protein S15 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4
Match NameE-valueIdentityDescription
ugt3a28.221e-5876.15UDP glycosyltransferase 3 family, polypeptide A2 [... [more]
ugt3a21.012e-5776.15UDP glycosyltransferase 3 family, polypeptide A2 [... [more]
ugt3a21.012e-5776.15UDP glycosyltransferase 3 family, polypeptide A2 [... [more]
ugt3a21.272e-5776.15UDP glycosyltransferase 3 family, polypeptide A2 [... [more]
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BLAST of 40S ribosomal protein S15 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Rps156.229e-6474.31ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:9... [more]
Rps152.553e-5185.26ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:9... [more]
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BLAST of 40S ribosomal protein S15 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P62845|RS15_RAT4.357e-6374.3140S ribosomal protein S15 OS=Rattus norvegicus OX=... [more]
sp|Q5RDI7|RS15_PONAB4.357e-6374.3140S ribosomal protein S15 OS=Pongo abelii OX=9601 ... [more]
sp|P62844|RS15_PIG4.357e-6374.3140S ribosomal protein S15 OS=Sus scrofa OX=9823 GN... [more]
sp|P62843|RS15_MOUSE4.357e-6374.3140S ribosomal protein S15 OS=Mus musculus OX=10090... [more]
sp|P62842|RS15_MESAU4.357e-6374.3140S ribosomal protein S15 OS=Mesocricetus auratus ... [more]
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BLAST of 40S ribosomal protein S15 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A267ENC92.389e-6376.06Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A5K3ELT87.620e-6371.83Uncharacterized protein OS=Mesocestoides corti OX=... [more]
A0A068WD709.485e-6374.8240s ribosomal protein s15 OS=Echinococcus granulos... [more]
A0A068YFL51.405e-6272.5440S ribosomal protein S15 OS=Echinococcus multiloc... [more]
W6UXX62.471e-6274.8240S ribosomal protein S15-B OS=Echinococcus granul... [more]
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BLAST of 40S ribosomal protein S15 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps151.677e-6274.13ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-03... [more]
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BLAST of 40S ribosomal protein S15 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps155.967e-6471.83ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-03... [more]
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BLAST of 40S ribosomal protein S15 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
RPS158.289e-4961.43Protein component of the small (40S) ribosomal sub... [more]
RSM199.438e-940.68Mitochondrial ribosomal protein of the small subun... [more]
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BLAST of 40S ribosomal protein S15 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO457679.986e-6173.38Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 40S ribosomal protein S15 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps152.990e-6374.65ribosomal protein S15 [Source:NCBI gene;Acc:101165... [more]
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BLAST of 40S ribosomal protein S15 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000015520.11.931e-69100.00SMESG000015520.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30002392 ID=SMED30002392|Name=40S ribosomal protein S15|organism=Schmidtea mediterranea sexual|type=transcript|length=531bp
TTTAAAATGATTACTGCTTAATAATTTGTTTAAATTATATCATTTCATAT
ATTATTTTCGATTTAAAATGGATGCATCAAAGAAAAGAGTATTTAAAAAA
TTTTACTACCGAGGAATTGATTTAGATCAATTATTAGAAATGAACATTCA
ACAATGTTCAGAACTGGTTAGAGCACGAATTAGAAGACGTCTTAGTAGAG
GACTTAAAAGACAACATGAAACTCTTCTTAAAAAGTTAAGACAAGCTAAA
AAAGCTATTACTGAAATTGGAGAAAAACCTAGCGTTGTTAAAACTCACCT
TAGAAATATGATAATTTTGCCTGAAATGGTTGGTTCAATGGTTGGTGTCT
ACAATGGAAAAACTTTCAATCACGTTGAAATTAAACCTGAAATGATAGGA
CATTACCTTGGTGAATTTAGCTTAACATACAAACCAGTCAAACACGGCAG
ACCAGGTATTGGTGCAACGCACAGTTCGAGATTTATTCCATTGAAATAAG
TTGAATGTTCGAATAAAAATTTGGAGTTGTT
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protein sequence of SMED30002392-orf-1

>SMED30002392-orf-1 ID=SMED30002392-orf-1|Name=SMED30002392-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=144bp
MDASKKRVFKKFYYRGIDLDQLLEMNIQQCSELVRARIRRRLSRGLKRQH
ETLLKKLRQAKKAITEIGEKPSVVKTHLRNMIILPEMVGSMVGVYNGKTF
NHVEIKPEMIGHYLGEFSLTYKPVKHGRPGIGATHSSRFIPLK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000429neoblast
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR005713Ribosomal_S19A/S15e
IPR002222Ribosomal_S19
IPR023575Ribosomal_S19_SF
IPR020934Ribosomal_S19_CS
Vocabulary: cellular component
TermDefinition
GO:0005840ribosome
GO:0005654nucleoplasm
GO:0015935small ribosomal subunit
GO:0022627cytosolic small ribosomal subunit
GO:0030529intracellular ribonucleoprotein complex
Vocabulary: biological process
TermDefinition
GO:0006412translation
GO:0000028ribosomal small subunit assembly
GO:0097421liver regeneration
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..63
NoneNo IPR availablePANTHERPTHR11880:SF240S RIBOSOMAL PROTEIN S15coord: 2..143
IPR002222Ribosomal protein S19/S15PRINTSPR00975RIBOSOMALS19coord: 76..95
score: 45.48
coord: 96..108
score: 41.94
coord: 108..123
score: 57.86
IPR002222Ribosomal protein S19/S15PIRSFPIRSF002144RPS19p_RPS19a_RPS15e_RPS19ocoord: 1..143
e-value: 3.7E-40
score: 133.9
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 40..126
e-value: 8.6E-37
score: 124.9
IPR002222Ribosomal protein S19/S15PANTHERPTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERcoord: 2..143
IPR023575Ribosomal protein S19, superfamilyGENE3DG3DSA:3.30.860.20coord: 1..143
e-value: 8.8E-68
score: 228.4
IPR023575Ribosomal protein S19, superfamilySUPERFAMILYSSF54570Ribosomal protein S19coord: 54..127
IPR005713Ribosomal protein S19A/S15eTIGRFAMTIGR01025TIGR01025coord: 9..143
e-value: 4.5E-65
score: 215.5
IPR020934Ribosomal protein S19 conserved sitePROSITEPS00323RIBOSOMAL_S19coord: 96..120