DNA-binding protein

Overview
NameDNA-binding protein
Smed IDSMED30002377
Length (bp)1037
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of DNA-binding protein (SMED30002377) t-SNE clustered cells

Violin plots show distribution of expression levels for DNA-binding protein (SMED30002377) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of DNA-binding protein (SMED30002377) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for DNA-binding protein (SMED30002377) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30002377

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 9

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30002377h1SMcG0021271 dd_Smed_v4_12317_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30002377h1SMcG0021271 dd_Smed_v4_12317_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30002377h1SMcG0021271 dd_Smed_v4_12317_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30002377h1SMcG0021271 dd_Smed_v4_12317_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30002377h1SMcG0021271 dd_Smed_v4_12317_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30002377h1SMcG0021271 dd_Smed_v4_12317_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30002377h1SMcG0021271 dd_Smed_v4_12317_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30002377h1SMcG0021271 dd_Smed_v4_12317_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
body wall musculatureSMED30002377h1SMcG0021271 dd_Smed_v4_12317_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of DNA-binding protein vs. Ensembl Human
Match: MEOX1 (mesenchyme homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7013])

HSP 1 Score: 105.145 bits (261), Expect = 5.633e-27
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L+ERQ+KVWFQNRRMK KR KG
Sbjct:   54 SKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVKG 116          
BLAST of DNA-binding protein vs. Ensembl Human
Match: MEOX1 (mesenchyme homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7013])

HSP 1 Score: 105.531 bits (262), Expect = 6.049e-26
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L+ERQ+KVWFQNRRMK KR KG
Sbjct:  169 SKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVKG 231          
BLAST of DNA-binding protein vs. Ensembl Human
Match: MEOX2 (mesenchyme homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7014])

HSP 1 Score: 105.531 bits (262), Expect = 1.632e-25
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K QI ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  185 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 247          
BLAST of DNA-binding protein vs. Ensembl Human
Match: AC004080.3 (HOXA10-HOXA9 readthrough)

HSP 1 Score: 77.7962 bits (190), Expect = 3.954e-17
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            RK+R  ++K Q LELEKEF  + YLTR RRYE+A  LNL ERQ+K+WFQNRRMK K+
Sbjct:   47 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 103          
BLAST of DNA-binding protein vs. Ensembl Human
Match: MNX1 (motor neuron and pancreas homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4979])

HSP 1 Score: 79.7221 bits (195), Expect = 4.805e-17
Identity = 35/63 (55.56%), Postives = 48/63 (76.19%), Query Frame = 3
Query:  825 FSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSK 1013
              K R+ RTAF+  Q+LELE +F ++ YL+R +R+E+A +L L E Q+K+WFQNRRMK KRSK
Sbjct:   26 LGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSK 88          
BLAST of DNA-binding protein vs. Ensembl Celegans
Match: lin-39 (Homeobox protein lin-39 [Source:UniProtKB/Swiss-Prot;Acc:P34684])

HSP 1 Score: 85.5001 bits (210), Expect = 5.478e-19
Identity = 35/58 (60.34%), Postives = 48/58 (82.76%), Query Frame = 3
Query:  834 QRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            ++++RTA+++ Q+LELEKEF  H YLTR RR E+A +L L ERQ+K+WFQNRRMK K+
Sbjct:  165 EKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKK 222          
BLAST of DNA-binding protein vs. Ensembl Celegans
Match: lin-39 (Homeobox protein lin-39 [Source:UniProtKB/Swiss-Prot;Acc:P34684])

HSP 1 Score: 85.5001 bits (210), Expect = 5.478e-19
Identity = 35/58 (60.34%), Postives = 48/58 (82.76%), Query Frame = 3
Query:  834 QRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            ++++RTA+++ Q+LELEKEF  H YLTR RR E+A +L L ERQ+K+WFQNRRMK K+
Sbjct:  165 EKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKK 222          
BLAST of DNA-binding protein vs. Ensembl Celegans
Match: ceh-12 (Homeobox protein ceh-12 [Source:UniProtKB/Swiss-Prot;Acc:P17487])

HSP 1 Score: 81.2629 bits (199), Expect = 4.492e-18
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 3
Query:  825 FSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            + K R+ RTAFS  Q+++LEK+FS + YL+R RRY+LA  L+L+E QIK+WFQNRRMK KR
Sbjct:  107 WGKMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKR 167          
BLAST of DNA-binding protein vs. Ensembl Celegans
Match: ceh-12 (Homeobox protein ceh-12 [Source:UniProtKB/Swiss-Prot;Acc:P17487])

HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-17
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            R+ RTAFS  Q+++LEK+FS + YL+R RRY+LA  L+L+E QIK+WFQNRRMK KR
Sbjct:    2 RRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKR 58          
BLAST of DNA-binding protein vs. Ensembl Celegans
Match: mab-5 (Homeobox protein mab-5 [Source:UniProtKB/Swiss-Prot;Acc:P10038])

HSP 1 Score: 78.1814 bits (191), Expect = 7.655e-17
Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR-SKGQ 1019
            ++ R  +S+ Q LELEKEF  H YLTR RR E++  L+L ERQ+K+WFQNRRMK K+ +KG+
Sbjct:  118 KRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAKGE 179          
BLAST of DNA-binding protein vs. Ensembl Fly
Match: btn (gene:FBgn0014949 transcript:FBtr0084278)

HSP 1 Score: 101.293 bits (251), Expect = 1.216e-25
Identity = 47/63 (74.60%), Postives = 51/63 (80.95%), Query Frame = 3
Query:  825 FSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSK 1013
             S  RKERTAFSK Q+ +LE EF   NYLTRLRRYE+AVAL L ERQ+KVWFQNRRMKCKR K
Sbjct:   83 ISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRMKCKRIK 145          
BLAST of DNA-binding protein vs. Ensembl Fly
Match: exex (gene:FBgn0041156 transcript:FBtr0076751)

HSP 1 Score: 85.8853 bits (211), Expect = 4.438e-18
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 3
Query:  825 FSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSK 1013
              K R+ RTAF+  Q+LELEK+F  + YL+R +R+E+A  L L+E Q+K+WFQNRRMK KRSK
Sbjct:  436 LGKTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSK 498          
BLAST of DNA-binding protein vs. Ensembl Fly
Match: pb (gene:FBgn0051481 transcript:FBtr0089279)

HSP 1 Score: 83.5741 bits (205), Expect = 3.224e-17
Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            R+ RTA++  Q+LELEKEF  + YL R RR E+A +L+L ERQ+KVWFQNRRMK KR
Sbjct:  189 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 245          
BLAST of DNA-binding protein vs. Ensembl Fly
Match: pb (gene:FBgn0051481 transcript:FBtr0089278)

HSP 1 Score: 83.5741 bits (205), Expect = 3.354e-17
Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            R+ RTA++  Q+LELEKEF  + YL R RR E+A +L+L ERQ+KVWFQNRRMK KR
Sbjct:  194 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 250          
BLAST of DNA-binding protein vs. Ensembl Fly
Match: pb (gene:FBgn0051481 transcript:FBtr0089277)

HSP 1 Score: 83.5741 bits (205), Expect = 3.385e-17
Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            R+ RTA++  Q+LELEKEF  + YL R RR E+A +L+L ERQ+KVWFQNRRMK KR
Sbjct:  194 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 250          
BLAST of DNA-binding protein vs. Ensembl Zebrafish
Match: meox2a (mesenchyme homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-080613-1])

HSP 1 Score: 105.145 bits (261), Expect = 1.317e-25
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K QI ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  185 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 247          
BLAST of DNA-binding protein vs. Ensembl Zebrafish
Match: meox2a (mesenchyme homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-080613-1])

HSP 1 Score: 105.145 bits (261), Expect = 1.317e-25
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K QI ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  185 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 247          
BLAST of DNA-binding protein vs. Ensembl Zebrafish
Match: meox2b (mesenchyme homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-060503-853])

HSP 1 Score: 104.76 bits (260), Expect = 1.530e-25
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K QI ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  171 SKPRKERTAFTKEQIRELESEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 233          
BLAST of DNA-binding protein vs. Ensembl Zebrafish
Match: meox2b (mesenchyme homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-060503-853])

HSP 1 Score: 104.76 bits (260), Expect = 1.530e-25
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K QI ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  171 SKPRKERTAFTKEQIRELESEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 233          
BLAST of DNA-binding protein vs. Ensembl Zebrafish
Match: meox1 (mesenchyme homeobox 1 [Source:NCBI gene;Acc:436723])

HSP 1 Score: 102.834 bits (255), Expect = 4.089e-25
Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 3
Query:  831 KQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            K RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  169 KARKERTAFTKEQLRELEAEFTHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 230          
BLAST of DNA-binding protein vs. Ensembl Xenopus
Match: meox2 (mesenchyme homeobox 2 [Source:NCBI gene;Acc:100144655])

HSP 1 Score: 105.145 bits (261), Expect = 1.925e-25
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K QI ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  181 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 243          
BLAST of DNA-binding protein vs. Ensembl Xenopus
Match: ENSXETT00000012532.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:6:32900780:32902234:1 gene:ENSXETG00000005181.1 transcript:ENSXETT00000012532.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 82.0333 bits (201), Expect = 2.261e-17
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            RK+R  ++K Q LELEKEF  + YLTR RRYE+A  LNL ERQ+K+WFQNRRMK K+
Sbjct:  196 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 252          
BLAST of DNA-binding protein vs. Ensembl Xenopus
Match: hnf4b (hepatocyte nuclear factor 4, beta [Source:Xenbase;Acc:XB-GENE-485826])

HSP 1 Score: 81.6481 bits (200), Expect = 3.927e-17
Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSK 1013
            ++ RTA+++ Q+LELEKEF  + Y++R RR ELAV LNL ER IK+WFQNRRMK K+ +
Sbjct:  148 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEE 206          
BLAST of DNA-binding protein vs. Ensembl Xenopus
Match: HOXD4 (homeobox D4 [Source:HGNC Symbol;Acc:HGNC:5138])

HSP 1 Score: 80.4925 bits (197), Expect = 4.983e-17
Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            ++ RTA+++ Q+LELEKEF  + YLTR RR E+A +L L+ERQIK+WFQNRRMK K+
Sbjct:  148 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 204          
BLAST of DNA-binding protein vs. Ensembl Xenopus
Match: ppm1j (protein phosphatase, Mg2+/Mn2+ dependent 1J [Source:Xenbase;Acc:XB-GENE-941439])

HSP 1 Score: 80.8777 bits (198), Expect = 5.523e-17
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
             + ++ RTA+++ Q+LELEKEF  + YLTR RR E+A  L L+ERQIK+WFQNRRMK K+
Sbjct:  168 GEAKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKK 227          
BLAST of DNA-binding protein vs. Ensembl Mouse
Match: Meox1 (mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:103220])

HSP 1 Score: 104.76 bits (260), Expect = 8.416e-26
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L+ERQ+KVWFQNRRMK KR KG
Sbjct:  168 SKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVKG 230          
BLAST of DNA-binding protein vs. Ensembl Mouse
Match: Meox2 (mesenchyme homeobox 2 [Source:MGI Symbol;Acc:MGI:103219])

HSP 1 Score: 105.145 bits (261), Expect = 1.404e-25
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K QI ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  184 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 246          
BLAST of DNA-binding protein vs. Ensembl Mouse
Match: Pdx1 (pancreatic and duodenal homeobox 1 [Source:MGI Symbol;Acc:MGI:102851])

HSP 1 Score: 81.2629 bits (199), Expect = 3.969e-17
Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSK 1013
            ++ RTA+++ Q+LELEKEF  + Y++R RR ELAV LNL ER IK+WFQNRRMK K+ +
Sbjct:  148 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEE 206          
BLAST of DNA-binding protein vs. Ensembl Mouse
Match: Hoxa5 (homeobox A5 [Source:MGI Symbol;Acc:MGI:96177])

HSP 1 Score: 80.8777 bits (198), Expect = 5.067e-17
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 3
Query:  831 KQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            + ++ RTA+++ Q LELEKEF  + YLTR RR E+A AL L+ERQIK+WFQNRRMK K+
Sbjct:  194 EGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 252          
BLAST of DNA-binding protein vs. Ensembl Mouse
Match: Hoxb4 (homeobox B4 [Source:MGI Symbol;Acc:MGI:96185])

HSP 1 Score: 80.1073 bits (196), Expect = 6.349e-17
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            ++ RTA+++ Q+LELEKEF  + YLTR RR E+A AL L+ERQIK+WFQNRRMK K+
Sbjct:  162 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 218          
BLAST of DNA-binding protein vs. UniProt/SwissProt
Match: sp|P50221|MEOX1_HUMAN (Homeobox protein MOX-1 OS=Homo sapiens OX=9606 GN=MEOX1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.905e-25
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L+ERQ+KVWFQNRRMK KR KG
Sbjct:  169 SKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVKG 231          
BLAST of DNA-binding protein vs. UniProt/SwissProt
Match: sp|A2T779|MEOX1_PANTR (Homeobox protein MOX-1 OS=Pan troglodytes OX=9598 GN=MEOX1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.935e-25
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L+ERQ+KVWFQNRRMK KR KG
Sbjct:  169 SKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVKG 231          
BLAST of DNA-binding protein vs. UniProt/SwissProt
Match: sp|A1YGA4|MEOX1_PANPA (Homeobox protein MOX-1 OS=Pan paniscus OX=9597 GN=MEOX1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.089e-25
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L+ERQ+KVWFQNRRMK KR KG
Sbjct:  169 SKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVKG 231          
BLAST of DNA-binding protein vs. UniProt/SwissProt
Match: sp|A2T7T2|MEOX1_PONPY (Homeobox protein MOX-1 OS=Pongo pygmaeus OX=9600 GN=MEOX1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.032e-25
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L+ERQ+KVWFQNRRMK KR KG
Sbjct:  169 SKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVKG 231          
BLAST of DNA-binding protein vs. UniProt/SwissProt
Match: sp|P32442|MEOX1_MOUSE (Homeobox protein MOX-1 OS=Mus musculus OX=10090 GN=Meox1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.887e-25
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L+ERQ+KVWFQNRRMK KR KG
Sbjct:  168 SKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVKG 230          
BLAST of DNA-binding protein vs. TrEMBL
Match: Q24682 (DNA-binding protein (Fragment) OS=Girardia tigrina OX=6162 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.011e-38
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 3
Query:  732 NKINEEXXXXXXXXXXXXXXXXXXXXXXXXXFSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQF 1022
            NKINEEQIDIQSKKSSSINNNNDTDSNDDISFSKQRKERTAFSKGQILELEKEF+VHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQF
Sbjct:   19 NKINEEQIDIQSKKSSSINNNNDTDSNDDISFSKQRKERTAFSKGQILELEKEFAVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQF 115          
BLAST of DNA-binding protein vs. TrEMBL
Match: V4AZ98 (Homeobox domain-containing protein (Fragment) OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_59048 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.743e-26
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAFSK QI +LEKEFSVHNYLTRLRRYE+AVALNL ERQ+KVWFQNRRMK KR KG
Sbjct:    2 SKPRKERTAFSKHQIRDLEKEFSVHNYLTRLRRYEIAVALNLTERQVKVWFQNRRMKWKRVKG 64          
BLAST of DNA-binding protein vs. TrEMBL
Match: A0A0D4RFK8 (Mesoderm homeobox OS=Terebratalia transversa OX=34513 GN=Mox PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.513e-26
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K QI ELEKEFSVHNYLTRLRRYE+AV+L+L ERQ+KVWFQNRRMK KR+KG
Sbjct:  159 SKPRKERTAFTKHQIKELEKEFSVHNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRTKG 221          
BLAST of DNA-binding protein vs. TrEMBL
Match: A0A2T7PV38 (Homeobox domain-containing protein OS=Pomacea canaliculata OX=400727 GN=C0Q70_04257 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.793e-26
Identity = 51/63 (80.95%), Postives = 57/63 (90.48%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            +K RKERTAF+K QI ELEKEF++HNYLTRLRRYE+AVALNL ERQ+KVWFQNRRMK KR KG
Sbjct:   52 AKPRKERTAFTKHQIRELEKEFALHNYLTRLRRYEIAVALNLTERQVKVWFQNRRMKWKRVKG 114          
BLAST of DNA-binding protein vs. TrEMBL
Match: A0A3S1AX36 (Homeobox domain-containing protein OS=Elysia chlorotica OX=188477 GN=EGW08_022697 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.423e-26
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 3
Query:  831 KQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            K RKERTAF+K QI ELEKEFS+HNYLTRLRRYELAVAL+L ERQ+KVWFQNRRMK KR KG
Sbjct:   53 KPRKERTAFTKHQIQELEKEFSLHNYLTRLRRYELAVALDLTERQVKVWFQNRRMKWKRVKG 114          
BLAST of DNA-binding protein vs. Ensembl Cavefish
Match: meox2a (mesenchyme homeobox 2 [Source:NCBI gene;Acc:103024054])

HSP 1 Score: 105.916 bits (263), Expect = 4.820e-26
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K QI ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  174 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 236          
BLAST of DNA-binding protein vs. Ensembl Cavefish
Match: meox2b (homeobox protein MOX-2-like [Source:NCBI gene;Acc:103041353])

HSP 1 Score: 105.531 bits (262), Expect = 8.532e-26
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            SK RKERTAF+K QI ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  181 SKPRKERTAFTKEQIRELESEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 243          
BLAST of DNA-binding protein vs. Ensembl Cavefish
Match: meox1 (mesenchyme homeobox 1 [Source:NCBI gene;Acc:103035291])

HSP 1 Score: 103.219 bits (256), Expect = 2.883e-25
Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 3
Query:  831 KQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            K RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  169 KARKERTAFTKEQLRELEAEFTHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 230          
BLAST of DNA-binding protein vs. Ensembl Cavefish
Match: ENSAMXT00000005320.2 (homeobox protein Hox-A9a-like [Source:NCBI gene;Acc:103022020])

HSP 1 Score: 84.7297 bits (208), Expect = 1.471e-18
Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            S  RK+R  ++K QILELEKEF  + YLTR RRYE+A  LNL ERQ+K+WFQNRRMK K+
Sbjct:  189 SSTRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 248          
BLAST of DNA-binding protein vs. Ensembl Cavefish
Match: ENSAMXT00000045941.1 (pancreas/duodenum homeobox protein 1-like [Source:NCBI gene;Acc:103022002])

HSP 1 Score: 83.5741 bits (205), Expect = 1.506e-18
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 3
Query:  831 KQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQ 1019
            + ++ RTA+S+ Q+LELEKEF  + Y++R RRYELA +LNL ER IK+WFQNRRMK K+ + +
Sbjct:  134 EHKRSRTAYSRAQLLELEKEFLFNRYISRPRRYELATSLNLTERHIKIWFQNRRMKWKKEEAK 196          
BLAST of DNA-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011242.1 (pep scaffold:Pmarinus_7.0:GL476758:607601:607780:-1 gene:ENSPMAG00000010215.1 transcript:ENSPMAT00000011242.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 81.2629 bits (199), Expect = 4.789e-20
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSK 1013
            RK+R  +SK Q LELEKEF  + YLTR RRYE+A  LNL ERQ+K+WFQNRRMK K+ K
Sbjct:    2 RKKRCPYSKQQTLELEKEFLFNMYLTRDRRYEVARGLNLTERQVKIWFQNRRMKLKKMK 60          
BLAST of DNA-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011060.1 (pep scaffold:Pmarinus_7.0:GL482503:5543:5722:1 gene:ENSPMAG00000010033.1 transcript:ENSPMAT00000011060.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 81.2629 bits (199), Expect = 4.789e-20
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSK 1013
            RK+R  +SK Q LELEKEF  + YLTR RRYE+A  LNL ERQ+K+WFQNRRMK K+ K
Sbjct:    2 RKKRCPYSKQQTLELEKEFLFNMYLTRDRRYEVARGLNLTERQVKIWFQNRRMKLKKMK 60          
BLAST of DNA-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001141.1 (pep scaffold:Pmarinus_7.0:GL478075:36995:38394:-1 gene:ENSPMAG00000001023.1 transcript:ENSPMAT00000001141.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 79.337 bits (194), Expect = 7.693e-19
Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
             K R+ RTAFS  Q+LELE+ FS   YL+R +R+++A AL L E Q+K+WFQNRRMK KR KG
Sbjct:    1 GKCRRPRTAFSSQQLLELERHFSRQRYLSRPQRFQVASALMLTETQVKIWFQNRRMKWKRGKG 63          
BLAST of DNA-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000986.1 (pep scaffold:Pmarinus_7.0:GL477479:36520:39429:-1 gene:ENSPMAG00000000894.1 transcript:ENSPMAT00000000986.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 78.1814 bits (191), Expect = 2.776e-18
Identity = 34/60 (56.67%), Postives = 48/60 (80.00%), Query Frame = 3
Query:  834 QRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSK 1013
            +++ RTAFS GQ+L LE+EFS   YL+RLRR  +A  L L+E+Q+K+WFQNRR+K K+S+
Sbjct:    2 EKRARTAFSSGQLLALEREFSASRYLSRLRRIHVAARLRLSEKQVKIWFQNRRVKQKKSE 61          
BLAST of DNA-binding protein vs. Ensembl Sea Lamprey
Match: hoxd4a (homeobox D4a [Source:NCBI gene;Acc:30329])

HSP 1 Score: 75.8702 bits (185), Expect = 8.466e-18
Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            ++ RTA+++ Q+LELEKEF  + YLTR RR E+A +L L+ERQIK+WFQNRRMK K+
Sbjct:    3 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 59          
BLAST of DNA-binding protein vs. Ensembl Nematostella
Match: MOXB (MoxB; Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR28])

HSP 1 Score: 101.293 bits (251), Expect = 1.073e-26
Identity = 47/65 (72.31%), Postives = 55/65 (84.62%), Query Frame = 3
Query:  825 FSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQ 1019
              K+RKERTAF+K QI ELE EF  +NYLTRLRRYE+AV+L+L ERQ+KVWFQNRRMK KR KG+
Sbjct:   13 LGKKRKERTAFTKHQIQELENEFQRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRVKGK 77          
BLAST of DNA-binding protein vs. Ensembl Nematostella
Match: MOXC (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR27])

HSP 1 Score: 99.3673 bits (246), Expect = 3.018e-26
Identity = 45/63 (71.43%), Postives = 55/63 (87.30%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            S++RKERT FSK Q+ ELE+EF  +NYLTRLRRYE+AV+L+L ERQ+KVWFQNRRMK KR +G
Sbjct:   12 SRKRKERTVFSKYQLTELEREFCRNNYLTRLRRYEIAVSLDLGERQVKVWFQNRRMKWKRGRG 74          
BLAST of DNA-binding protein vs. Ensembl Nematostella
Match: MOX1 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR25])

HSP 1 Score: 82.8037 bits (203), Expect = 6.065e-20
Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 3
Query:  867 QILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQ 1019
            Q+ ELE EF+ +NYLTRLRRYE+AV+L+L ERQ+KVWFQNRRMK KR KG+
Sbjct:    3 QLRELENEFTRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRVKGE 53          
BLAST of DNA-binding protein vs. Ensembl Nematostella
Match: EDO42243 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S290])

HSP 1 Score: 78.5666 bits (192), Expect = 1.047e-18
Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
             + R+ RTAFS  Q+L LE++F +H YLTR +RYELA +L L E Q+K+WFQNRRMK KR
Sbjct:    5 GRHRRPRTAFSSHQLLALERQFQLHKYLTRPQRYELATSLMLTETQVKIWFQNRRMKWKR 64          
BLAST of DNA-binding protein vs. Ensembl Nematostella
Match: EDO33847 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR26])

HSP 1 Score: 77.411 bits (189), Expect = 2.855e-18
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 3
Query:  867 QILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            Q+ ELE EF  +NYLTRLRRYE+AV+L+L ERQ+KVWFQNRRMK KR KG
Sbjct:    2 QLQELENEFIRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRVKG 51          
BLAST of DNA-binding protein vs. Ensembl Medaka
Match: meox2a (mesenchyme homeobox 2 [Source:NCBI gene;Acc:101169883])

HSP 1 Score: 105.531 bits (262), Expect = 1.016e-25
Identity = 48/63 (76.19%), Postives = 53/63 (84.13%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
             K RKERTAF+K QI ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  198 GKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 260          
BLAST of DNA-binding protein vs. Ensembl Medaka
Match: meox1 (mesenchyme homeobox 1 [Source:NCBI gene;Acc:101173748])

HSP 1 Score: 102.834 bits (255), Expect = 4.397e-25
Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 3
Query:  831 KQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKG 1016
            K RKERTAF+K Q+ ELE EF+ HNYLTRLRRYE+AV L+L ERQ+KVWFQNRRMK KR KG
Sbjct:  180 KARKERTAFTKEQLRELEAEFTHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 241          
BLAST of DNA-binding protein vs. Ensembl Medaka
Match: hoxa9 (homeobox A9 [Source:NCBI gene;Acc:100049208])

HSP 1 Score: 86.2705 bits (212), Expect = 4.635e-19
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQF*YNKD 1037
            S  RK+R  ++K QILELEKEF  + YLTR RRYE+A  LNL ERQ+K+WFQNRRMK K+      +NKD
Sbjct:  194 SATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK------FNKD 257          
BLAST of DNA-binding protein vs. Ensembl Medaka
Match: hoxb9a (homeobox B9 [Source:NCBI gene;Acc:100049206])

HSP 1 Score: 82.4185 bits (202), Expect = 1.553e-17
Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            RK+R  ++K Q LELEKEF  + YLTR RR+E+A ALNL ERQ+K+WFQNRRMK K+
Sbjct:  218 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQVKIWFQNRRMKMKK 274          
BLAST of DNA-binding protein vs. Ensembl Medaka
Match: ENSORLT00000022856.2 (pep primary_assembly:ASM223467v1:21:28760997:28766425:-1 gene:ENSORLG00000018251.2 transcript:ENSORLT00000022856.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 78.5666 bits (192), Expect = 1.861e-17
Identity = 35/63 (55.56%), Postives = 48/63 (76.19%), Query Frame = 3
Query:  825 FSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSK 1013
              K R+ RTAF+  Q+LELE +F V+ YL+R +R+E+A +L L E Q+K+WFQNRRMK KRS+
Sbjct:   17 LGKCRRPRTAFTSQQLLELENQFKVNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSR 79          
BLAST of DNA-binding protein vs. Planmine SMEST
Match: SMESG000062714.1 (SMESG000062714.1)

HSP 1 Score: 533.487 bits (1373), Expect = 0.000e+0
Identity = 291/293 (99.32%), Postives = 291/293 (99.32%), Query Frame = 3
Query:  144 MNINNKSAGKFYSKLGAIPNQSYHHLPQSLYHDYLPGYSTQNKTYPYHHQNNYNPPLINLHPSHMYYQSPYPALSVDYPDFNSNVSSRDFIKSQNYSFNYYNSQHKPNSILTPTAMNLSINNIVIPSVCGKFGFDNSYNSPTTLPFNVHYSNSINFCNNTTIENSPSVSENATVPISGNISSSTDNKLPINQSQYPNKINEEXXXXXXXXXXXXXXXXXXXXXXXXXFSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQF 1022
            MNINNKSAGKFYSKLGAIPNQSYHHLPQSLYHDYLPGYSTQNKTYPYHHQNNYNP LINLHPSHMYYQSPYPALSVDYPDFNSNVSSRDFIKSQNYSFNYYNSQHKPNSILTPTAMNLSINNIVIPSVCGKFGFDNSYNSPTTLPFNVHYSNSINFCNNTTIENSPSVSENATVPIS NISSSTDNKLPINQSQYPNKINEEQIDIQSKKSSSINNNNDTDSNDDISFSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQF
Sbjct:    1 MNINNKSAGKFYSKLGAIPNQSYHHLPQSLYHDYLPGYSTQNKTYPYHHQNNYNPSLINLHPSHMYYQSPYPALSVDYPDFNSNVSSRDFIKSQNYSFNYYNSQHKPNSILTPTAMNLSINNIVIPSVCGKFGFDNSYNSPTTLPFNVHYSNSINFCNNTTIENSPSVSENATVPISRNISSSTDNKLPINQSQYPNKINEEQIDIQSKKSSSINNNNDTDSNDDISFSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQF 293          
BLAST of DNA-binding protein vs. Planmine SMEST
Match: SMESG000071019.1 (SMESG000071019.1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.306e-18
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 3
Query:  825 FSKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
             S  ++ RTA+++ QILELEKEF  + YLTR RR E+A +L L+ERQ+K+WFQNRRMK K+
Sbjct:  222 LSDSKRNRTAYTRQQILELEKEFHFNKYLTRKRRIEIAQSLQLSERQVKIWFQNRRMKWKK 282          
BLAST of DNA-binding protein vs. Planmine SMEST
Match: SMESG000043155.1 (SMESG000043155.1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.848e-16
Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = 3
Query:  831 KQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQF 1022
            ++R+ R  +S+ Q LELEKEF  ++YLTR RR E+A  L L+ERQIK+WFQNRRMK K+ + Q 
Sbjct:  250 QKRRGRQTYSRHQTLELEKEFQFNHYLTRRRRIEIAHNLCLSERQIKIWFQNRRMKLKKERQQI 313          
BLAST of DNA-binding protein vs. Planmine SMEST
Match: SMESG000044469.1 (SMESG000044469.1)

HSP 1 Score: 75.485 bits (184), Expect = 3.631e-16
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  837 RKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            ++ R A+S+ Q LELEKEF  + YLTR RR E+A ++ L+ERQIK+WFQNRRMK K+
Sbjct:  106 KRSRQAYSRQQTLELEKEFYYNQYLTRRRRIEIANSVCLSERQIKIWFQNRRMKYKK 162          
BLAST of DNA-binding protein vs. Planmine SMEST
Match: SMESG000079807.1 (SMESG000079807.1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.944e-16
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 3
Query:  828 SKQRKERTAFSKGQILELEKEFSVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKR 1007
            S  ++ R  +++ Q LELEKEF  + YLTR RR E+A AL+L ERQIK+WFQNRRMK K+
Sbjct:  211 SDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKK 270          
The following BLAST results are available for this feature:
BLAST of DNA-binding protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
MEOX15.633e-2776.19mesenchyme homeobox 1 [Source:HGNC Symbol;Acc:HGNC... [more]
MEOX16.049e-2676.19mesenchyme homeobox 1 [Source:HGNC Symbol;Acc:HGNC... [more]
MEOX21.632e-2577.78mesenchyme homeobox 2 [Source:HGNC Symbol;Acc:HGNC... [more]
AC004080.33.954e-1764.91HOXA10-HOXA9 readthrough[more]
MNX14.805e-1755.56motor neuron and pancreas homeobox 1 [Source:HGNC ... [more]
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BLAST of DNA-binding protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
lin-395.478e-1960.34Homeobox protein lin-39 [Source:UniProtKB/Swiss-P... [more]
lin-395.478e-1960.34Homeobox protein lin-39 [Source:UniProtKB/Swiss-P... [more]
ceh-124.492e-1860.66Homeobox protein ceh-12 [Source:UniProtKB/Swiss-P... [more]
ceh-121.652e-1763.16Homeobox protein ceh-12 [Source:UniProtKB/Swiss-P... [more]
mab-57.655e-1756.45Homeobox protein mab-5 [Source:UniProtKB/Swiss-Pr... [more]
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BLAST of DNA-binding protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
btn1.216e-2574.60gene:FBgn0014949 transcript:FBtr0084278[more]
exex4.438e-1857.14gene:FBgn0041156 transcript:FBtr0076751[more]
pb3.224e-1763.16gene:FBgn0051481 transcript:FBtr0089279[more]
pb3.354e-1763.16gene:FBgn0051481 transcript:FBtr0089278[more]
pb3.385e-1763.16gene:FBgn0051481 transcript:FBtr0089277[more]
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BLAST of DNA-binding protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
meox2a1.317e-2577.78mesenchyme homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-0... [more]
meox2a1.317e-2577.78mesenchyme homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-0... [more]
meox2b1.530e-2577.78mesenchyme homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-0... [more]
meox2b1.530e-2577.78mesenchyme homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-0... [more]
meox14.089e-2575.81mesenchyme homeobox 1 [Source:NCBI gene;Acc:436723... [more]
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BLAST of DNA-binding protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
meox21.925e-2577.78mesenchyme homeobox 2 [Source:NCBI gene;Acc:100144... [more]
ENSXETT00000012532.12.261e-1764.91pep primary_assembly:Xenopus_tropicalis_v9.1:6:329... [more]
hnf4b3.927e-1759.32hepatocyte nuclear factor 4, beta [Source:Xenbase;... [more]
HOXD44.983e-1761.40homeobox D4 [Source:HGNC Symbol;Acc:HGNC:5138][more]
ppm1j5.523e-1758.33protein phosphatase, Mg2+/Mn2+ dependent 1J [Sourc... [more]
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BLAST of DNA-binding protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Meox18.416e-2676.19mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:1... [more]
Meox21.404e-2577.78mesenchyme homeobox 2 [Source:MGI Symbol;Acc:MGI:1... [more]
Pdx13.969e-1759.32pancreatic and duodenal homeobox 1 [Source:MGI Sym... [more]
Hoxa55.067e-1761.02homeobox A5 [Source:MGI Symbol;Acc:MGI:96177][more]
Hoxb46.349e-1763.16homeobox B4 [Source:MGI Symbol;Acc:MGI:96185][more]
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BLAST of DNA-binding protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P50221|MEOX1_HUMAN2.905e-2576.19Homeobox protein MOX-1 OS=Homo sapiens OX=9606 GN=... [more]
sp|A2T779|MEOX1_PANTR2.935e-2576.19Homeobox protein MOX-1 OS=Pan troglodytes OX=9598 ... [more]
sp|A1YGA4|MEOX1_PANPA3.089e-2576.19Homeobox protein MOX-1 OS=Pan paniscus OX=9597 GN=... [more]
sp|A2T7T2|MEOX1_PONPY4.032e-2576.19Homeobox protein MOX-1 OS=Pongo pygmaeus OX=9600 G... [more]
sp|P32442|MEOX1_MOUSE5.887e-2576.19Homeobox protein MOX-1 OS=Mus musculus OX=10090 GN... [more]
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BLAST of DNA-binding protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
Q246822.011e-3898.97DNA-binding protein (Fragment) OS=Girardia tigrina... [more]
V4AZ983.743e-2685.71Homeobox domain-containing protein (Fragment) OS=L... [more]
A0A0D4RFK84.513e-2682.54Mesoderm homeobox OS=Terebratalia transversa OX=34... [more]
A0A2T7PV384.793e-2680.95Homeobox domain-containing protein OS=Pomacea cana... [more]
A0A3S1AX365.423e-2683.87Homeobox domain-containing protein OS=Elysia chlor... [more]
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BLAST of DNA-binding protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
meox2a4.820e-2677.78mesenchyme homeobox 2 [Source:NCBI gene;Acc:103024... [more]
meox2b8.532e-2677.78homeobox protein MOX-2-like [Source:NCBI gene;Acc:... [more]
meox12.883e-2575.81mesenchyme homeobox 1 [Source:NCBI gene;Acc:103035... [more]
ENSAMXT00000005320.21.471e-1865.00homeobox protein Hox-A9a-like [Source:NCBI gene;Ac... [more]
ENSAMXT00000045941.11.506e-1857.14pancreas/duodenum homeobox protein 1-like [Source:... [more]
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BLAST of DNA-binding protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSPMAT00000011242.14.789e-2066.10pep scaffold:Pmarinus_7.0:GL476758:607601:607780:-... [more]
ENSPMAT00000011060.14.789e-2066.10pep scaffold:Pmarinus_7.0:GL482503:5543:5722:1 gen... [more]
ENSPMAT00000001141.17.693e-1958.73pep scaffold:Pmarinus_7.0:GL478075:36995:38394:-1 ... [more]
ENSPMAT00000000986.12.776e-1856.67pep scaffold:Pmarinus_7.0:GL477479:36520:39429:-1 ... [more]
hoxd4a8.466e-1861.40homeobox D4a [Source:NCBI gene;Acc:30329][more]
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BLAST of DNA-binding protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of DNA-binding protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
MOXB1.073e-2672.31MoxB; Predicted protein [Source:UniProtKB/TrEMBL;... [more]
MOXC3.018e-2671.43Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
MOX16.065e-2072.55Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO422431.047e-1860.00Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO338472.855e-1874.00Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of DNA-binding protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
meox2a1.016e-2576.19mesenchyme homeobox 2 [Source:NCBI gene;Acc:101169... [more]
meox14.397e-2575.81mesenchyme homeobox 1 [Source:NCBI gene;Acc:101173... [more]
hoxa94.635e-1960.00homeobox A9 [Source:NCBI gene;Acc:100049208][more]
hoxb9a1.553e-1764.91homeobox B9 [Source:NCBI gene;Acc:100049206][more]
ENSORLT00000022856.21.861e-1755.56pep primary_assembly:ASM223467v1:21:28760997:28766... [more]
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BLAST of DNA-binding protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000062714.10.000e+099.32SMESG000062714.1[more]
SMESG000071019.19.306e-1859.02SMESG000071019.1[more]
SMESG000043155.11.848e-1656.25SMESG000043155.1[more]
SMESG000044469.13.631e-1659.65SMESG000044469.1[more]
SMESG000079807.14.944e-1658.33SMESG000079807.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30002377 ID=SMED30002377|Name=DNA-binding protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1037bp
CAAAAAAAAATACGTCCGAATCCTCCATCCGTATCATAGTCCATTGAAAA
TCAATTATCTCTACGAATAAACTAATCAGTGTCAAAATATTAATTAGAAT
ATCTTGCGGATAGGAAACAATTGTTAAACATTTCCATCTATCAATGAATA
TCAACAACAAATCAGCCGGTAAATTTTACAGTAAACTCGGTGCTATCCCA
AACCAATCCTATCACCACCTACCTCAGTCTCTTTATCACGATTATCTCCC
AGGTTATTCCACACAGAACAAAACCTATCCATATCACCATCAAAACAACT
ACAATCCACCTCTCATAAACCTTCACCCTTCACATATGTACTACCAATCA
CCATATCCAGCCTTGAGTGTGGATTATCCAGATTTCAATTCAAATGTTTC
CTCAAGAGACTTCATTAAATCCCAAAACTATTCCTTCAACTATTACAACT
CCCAACACAAACCGAATTCAATTTTAACTCCAACTGCAATGAATCTTTCA
ATCAACAACATAGTGATCCCATCAGTTTGCGGGAAATTCGGATTCGACAA
CTCATACAACTCACCGACAACGCTTCCTTTCAATGTCCACTACTCGAATT
CGATCAACTTCTGCAACAATACGACAATCGAAAATTCACCATCTGTATCA
GAGAATGCCACGGTTCCAATTTCCGGAAATATTTCCTCTTCGACAGACAA
TAAACTACCAATCAACCAATCGCAATATCCCAATAAAATCAATGAAGAAC
AAATCGATATCCAGTCGAAAAAATCATCGTCAATCAATAACAATAACGAT
ACCGACTCCAATGATGATATTTCCTTTTCCAAACAGAGAAAAGAAAGAAC
TGCTTTCAGTAAGGGTCAGATCCTTGAATTAGAAAAAGAATTTTCCGTTC
ATAATTATTTGACCAGGCTGAGAAGGTATGAACTTGCGGTGGCACTTAAT
TTAAACGAAAGACAGATTAAAGTGTGGTTTCAAAATAGAAGAATGAAATG
CAAACGATCCAAAGGTCAATTCTGATATAATAAAGAC
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protein sequence of SMED30002377-orf-1

>SMED30002377-orf-1 ID=SMED30002377-orf-1|Name=SMED30002377-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=294bp
MNINNKSAGKFYSKLGAIPNQSYHHLPQSLYHDYLPGYSTQNKTYPYHHQ
NNYNPPLINLHPSHMYYQSPYPALSVDYPDFNSNVSSRDFIKSQNYSFNY
YNSQHKPNSILTPTAMNLSINNIVIPSVCGKFGFDNSYNSPTTLPFNVHY
SNSINFCNNTTIENSPSVSENATVPISGNISSSTDNKLPINQSQYPNKIN
EEQIDIQSKKSSSINNNNDTDSNDDISFSKQRKERTAFSKGQILELEKEF
SVHNYLTRLRRYELAVALNLNERQIKVWFQNRRMKCKRSKGQF*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: biological process
TermDefinition
GO:0045944positive regulation of transcription from RNA polymerase II promoter
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000101muscle cell
PLANA:0000240body wall musculature
PLANA:0002032epidermal cell
Vocabulary: INTERPRO
TermDefinition
IPR042634MOX-1/MOX-2
IPR001589Actinin_actin-bd_CS
IPR020479Homeobox_metazoa
IPR001356Homeobox_dom
IPR009057Homeobox-like_sf
IPR017970Homeobox_CS
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020479Homeobox domain, metazoaPRINTSPR00024HOMEOBOXcoord: 253..264
score: 44.65
coord: 278..287
score: 81.14
coord: 268..278
score: 58.04
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 231..293
e-value: 7.0E-25
score: 98.7
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 232..288
e-value: 2.1E-20
score: 72.3
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 229..289
score: 21.119
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 232..290
e-value: 2.90186E-22
score: 85.758
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 192..292
e-value: 4.5E-25
score: 89.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..197
IPR042634Homeobox protein MOX-1/MOX-2PANTHERPTHR24328FAMILY NOT NAMEDcoord: 48..291
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 264..287
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 218..289