SMED30002357
Overview
Neoblast Clusters
Zeng et. al., 2018
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppEmbryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30002357 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 12
Alignments
SMED30002357 aligns in the following genomic locations:
Homology
BLAST of SMED30002357 vs. Ensembl Human
Match: EPPIN (epididymal peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:15932]) HSP 1 Score: 56.225 bits (134), Expect = 6.284e-11 Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = -3 Query: 114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296 C+F + ++ K C + ETG C AYF+ + +D K C FVYGGC N+NNF ++A Sbjct: 45 CVFSCGKKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKA 105
BLAST of SMED30002357 vs. Ensembl Human
Match: EPPIN (epididymal peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:15932]) HSP 1 Score: 56.225 bits (134), Expect = 9.110e-11 Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = -3 Query: 114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296 C+F + ++ K C + ETG C AYF+ + +D K C FVYGGC N+NNF ++A Sbjct: 61 CVFSCGKKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKA 121
BLAST of SMED30002357 vs. Ensembl Human
Match: EPPIN-WFDC6 (EPPIN-WFDC6 readthrough [Source:HGNC Symbol;Acc:HGNC:38825]) HSP 1 Score: 56.225 bits (134), Expect = 2.095e-10 Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = -3 Query: 114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296 C+F + ++ K C + ETG C AYF+ + +D K C FVYGGC N+NNF ++A Sbjct: 61 CVFSCGKKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKA 121
BLAST of SMED30002357 vs. Ensembl Human
Match: EPPIN-WFDC6 (EPPIN-WFDC6 readthrough [Source:HGNC Symbol;Acc:HGNC:38825]) HSP 1 Score: 56.225 bits (134), Expect = 2.405e-10 Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = -3 Query: 114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296 C+F + ++ K C + ETG C AYF+ + +D K C FVYGGC N+NNF ++A Sbjct: 61 CVFSCGKKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKA 121
BLAST of SMED30002357 vs. Ensembl Human
Match: WFIKKN2 (WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30916]) HSP 1 Score: 52.7582 bits (125), Expect = 9.629e-9 Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = -3 Query: 117 LQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 278 L + G C+L G C+AY R+ ++ + G+C++FVYGGC N NNF +R Sbjct: 283 LACMSGPLAACSLPALQGPCKAYAPRWAYNSQTGQCQSFVYGGCEGNGNNFESR 336
BLAST of SMED30002357 vs. Ensembl Celegans
Match: mlt-11 (pep chromosome:WBcel235:V:20667211:20678513:1 gene:WBGene00012186.1 transcript:W01F3.3b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mlt-11) HSP 1 Score: 51.2174 bits (121), Expect = 1.344e-8 Identity = 22/49 (44.90%), Postives = 27/49 (55.10%), Query Frame = -3 Query: 120 KAP--ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 260 K+P C +E G C F R+ FD + CR+F YGGC N NNF T Sbjct: 860 KSPVATCEADIEVGECAGVFSRFAFDKSINACRSFTYGGCGGNANNFAT 908 HSP 2 Score: 50.447 bits (119), Expect = 2.602e-8 Identity = 22/54 (40.74%), Postives = 30/54 (55.56%), Query Frame = -3 Query: 126 VAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 287 V LQ +A C+L E G C Y +R+ F+ L +C+ F +GGC N NNF Sbjct: 526 VVGLQTSGARATRCSLPKERGPCDKYELRFYFNADLNECKYFFWGGCEGNQNNF 579 HSP 3 Score: 44.2838 bits (103), Expect = 3.543e-6 Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3 Query: 117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248 C + + G+C Y R+ F+ + G+C F YG C N+NNF R Sbjct: 2177 CAMPPDAGVCTNYTPRWFFNSQTGQCEQFAYGSCGGNENNFFDR 2220
BLAST of SMED30002357 vs. Ensembl Celegans
Match: mlt-11 (pep chromosome:WBcel235:V:20667211:20678513:1 gene:WBGene00012186.1 transcript:W01F3.3d.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mlt-11) HSP 1 Score: 51.2174 bits (121), Expect = 1.357e-8 Identity = 22/49 (44.90%), Postives = 27/49 (55.10%), Query Frame = -3 Query: 120 KAP--ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 260 K+P C +E G C F R+ FD + CR+F YGGC N NNF T Sbjct: 851 KSPVATCEADIEVGECAGVFSRFAFDKSINACRSFTYGGCGGNANNFAT 899 HSP 2 Score: 50.447 bits (119), Expect = 2.577e-8 Identity = 22/54 (40.74%), Postives = 30/54 (55.56%), Query Frame = -3 Query: 126 VAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 287 V LQ +A C+L E G C Y +R+ F+ L +C+ F +GGC N NNF Sbjct: 526 VVGLQTSGARATRCSLPKERGPCDKYELRFYFNADLNECKYFFWGGCEGNQNNF 579 HSP 3 Score: 44.2838 bits (103), Expect = 3.543e-6 Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3 Query: 117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248 C + + G+C Y R+ F+ + G+C F YG C N+NNF R Sbjct: 2168 CAMPPDAGVCTNYTPRWFFNSQTGQCEQFAYGSCGGNENNFFDR 2211
BLAST of SMED30002357 vs. Ensembl Celegans
Match: mlt-11 (pep chromosome:WBcel235:V:20667209:20678513:1 gene:WBGene00012186.1 transcript:W01F3.3c.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mlt-11) HSP 1 Score: 51.2174 bits (121), Expect = 1.615e-8 Identity = 22/49 (44.90%), Postives = 27/49 (55.10%), Query Frame = -3 Query: 120 KAP--ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 260 K+P C +E G C F R+ FD + CR+F YGGC N NNF T Sbjct: 731 KSPVATCEADIEVGECAGVFSRFAFDKSINACRSFTYGGCGGNANNFAT 779 HSP 2 Score: 50.447 bits (119), Expect = 2.979e-8 Identity = 22/54 (40.74%), Postives = 30/54 (55.56%), Query Frame = -3 Query: 126 VAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 287 V LQ +A C+L E G C Y +R+ F+ L +C+ F +GGC N NNF Sbjct: 397 VVGLQTSGARATRCSLPKERGPCDKYELRFYFNADLNECKYFFWGGCEGNQNNF 450 HSP 3 Score: 44.2838 bits (103), Expect = 4.135e-6 Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3 Query: 117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248 C + + G+C Y R+ F+ + G+C F YG C N+NNF R Sbjct: 2048 CAMPPDAGVCTNYTPRWFFNSQTGQCEQFAYGSCGGNENNFFDR 2091
BLAST of SMED30002357 vs. Ensembl Celegans
Match: mlt-11 (pep chromosome:WBcel235:V:20667211:20678513:1 gene:WBGene00012186.1 transcript:W01F3.3e.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mlt-11) HSP 1 Score: 50.447 bits (119), Expect = 2.722e-8 Identity = 20/43 (46.51%), Postives = 24/43 (55.81%), Query Frame = -3 Query: 120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248 C +E G C F R+ FD + CR+F YGGC N NNF T Sbjct: 866 CEADIEVGECAGVFSRFAFDKSINACRSFTYGGCGGNANNFAT 908 HSP 2 Score: 49.6766 bits (117), Expect = 4.511e-8 Identity = 22/54 (40.74%), Postives = 30/54 (55.56%), Query Frame = -3 Query: 126 VAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 287 V LQ +A C+L E G C Y +R+ F+ L +C+ F +GGC N NNF Sbjct: 526 VVGLQTSGARATRCSLPKERGPCDKYELRFYFNADLNECKYFFWGGCEGNQNNF 579 HSP 3 Score: 43.8986 bits (102), Expect = 5.735e-6 Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3 Query: 117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248 C + + G+C Y R+ F+ + G+C F YG C N+NNF R Sbjct: 1651 CAMPPDAGVCTNYTPRWFFNSQTGQCEQFAYGSCGGNENNFFDR 1694
BLAST of SMED30002357 vs. Ensembl Celegans
Match: mlt-11 (pep chromosome:WBcel235:V:20667209:20678513:1 gene:WBGene00012186.1 transcript:W01F3.3h.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mlt-11) HSP 1 Score: 50.447 bits (119), Expect = 2.856e-8 Identity = 20/43 (46.51%), Postives = 24/43 (55.81%), Query Frame = -3 Query: 120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248 C +E G C F R+ FD + CR+F YGGC N NNF T Sbjct: 645 CEADIEVGECAGVFSRFAFDKSINACRSFTYGGCGGNANNFAT 687 HSP 2 Score: 49.6766 bits (117), Expect = 4.825e-8 Identity = 22/54 (40.74%), Postives = 30/54 (55.56%), Query Frame = -3 Query: 126 VAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 287 V LQ +A C+L E G C Y +R+ F+ L +C+ F +GGC N NNF Sbjct: 305 VVGLQTSGARATRCSLPKERGPCDKYELRFYFNADLNECKYFFWGGCEGNQNNF 358 HSP 3 Score: 43.8986 bits (102), Expect = 6.134e-6 Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3 Query: 117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248 C + + G+C Y R+ F+ + G+C F YG C N+NNF R Sbjct: 1575 CAMPPDAGVCTNYTPRWFFNSQTGQCEQFAYGSCGGNENNFFDR 1618
BLAST of SMED30002357 vs. Ensembl Fly
Match: CG3604 (gene:FBgn0031562 transcript:FBtr0077545) HSP 1 Score: 50.447 bits (119), Expect = 8.420e-9 Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = -3 Query: 117 ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 251 +C+ ETG C A F RY ++V C FVYGGC N NNF ++ Sbjct: 54 DCHQPKETGRCFALFYRYAYNVDTQSCEEFVYGGCAGNKNNFESK 98
BLAST of SMED30002357 vs. Ensembl Fly
Match: CG3604 (gene:FBgn0031562 transcript:FBtr0346581) HSP 1 Score: 50.447 bits (119), Expect = 8.420e-9 Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = -3 Query: 117 ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 251 +C+ ETG C A F RY ++V C FVYGGC N NNF ++ Sbjct: 54 DCHQPKETGRCFALFYRYAYNVDTQSCEEFVYGGCAGNKNNFESK 98
BLAST of SMED30002357 vs. Ensembl Fly
Match: Ppn (gene:FBgn0003137 transcript:FBtr0300337) HSP 1 Score: 50.447 bits (119), Expect = 3.182e-8 Identity = 23/45 (51.11%), Postives = 25/45 (55.56%), Query Frame = -3 Query: 114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248 C L ETG C Y V+Y FD G C F YGGC NDN F + A Sbjct: 1612 CGLPKETGTCNNYSVKYYFDTSYGGCARFWYGGCDGNDNRFESEA 1656 HSP 2 Score: 43.8986 bits (102), Expect = 6.838e-6 Identity = 19/45 (42.22%), Postives = 25/45 (55.56%), Query Frame = -3 Query: 120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254 P C +E+G C F R+ +D + CR F YGGC N NN+ T Sbjct: 1728 PTCEQPVESGPCAGNFERWYYDNETDICRPFTYGGCKGNKNNYPT 1772
BLAST of SMED30002357 vs. Ensembl Fly
Match: Ppn (gene:FBgn0003137 transcript:FBtr0301839) HSP 1 Score: 50.447 bits (119), Expect = 3.776e-8 Identity = 23/45 (51.11%), Postives = 25/45 (55.56%), Query Frame = -3 Query: 114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248 C L ETG C Y V+Y FD G C F YGGC NDN F + A Sbjct: 1612 CGLPKETGTCNNYSVKYYFDTSYGGCARFWYGGCDGNDNRFESEA 1656 HSP 2 Score: 43.5134 bits (101), Expect = 8.112e-6 Identity = 19/45 (42.22%), Postives = 25/45 (55.56%), Query Frame = -3 Query: 120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254 P C +E+G C F R+ +D + CR F YGGC N NN+ T Sbjct: 1728 PTCEQPVESGPCAGNFERWYYDNETDICRPFTYGGCKGNKNNYPT 1772
BLAST of SMED30002357 vs. Ensembl Fly
Match: Ppn (gene:FBgn0003137 transcript:FBtr0301838) HSP 1 Score: 50.447 bits (119), Expect = 3.812e-8 Identity = 23/45 (51.11%), Postives = 25/45 (55.56%), Query Frame = -3 Query: 114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248 C L ETG C Y V+Y FD G C F YGGC NDN F + A Sbjct: 1612 CGLPKETGTCNNYSVKYYFDTSYGGCARFWYGGCDGNDNRFESEA 1656 HSP 2 Score: 43.5134 bits (101), Expect = 8.187e-6 Identity = 19/45 (42.22%), Postives = 25/45 (55.56%), Query Frame = -3 Query: 120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254 P C +E+G C F R+ +D + CR F YGGC N NN+ T Sbjct: 1728 PTCEQPVESGPCAGNFERWYYDNETDICRPFTYGGCKGNKNNYPT 1772
BLAST of SMED30002357 vs. Ensembl Zebrafish
Match: col28a2a (collagen, type XXVIII, alpha 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4444]) HSP 1 Score: 53.1434 bits (126), Expect = 4.469e-9 Identity = 21/45 (46.67%), Postives = 26/45 (57.78%), Query Frame = -3 Query: 120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254 P C LS G CR Y +R+ ++ + C F YGGC NDN FHT Sbjct: 1134 PRCQLSFVQGSCRNYVIRWYYEKQSNSCAQFWYGGCDGNDNRFHT 1178
BLAST of SMED30002357 vs. Ensembl Zebrafish
Match: col28a2a (collagen, type XXVIII, alpha 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4444]) HSP 1 Score: 53.1434 bits (126), Expect = 4.472e-9 Identity = 21/45 (46.67%), Postives = 26/45 (57.78%), Query Frame = -3 Query: 120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254 P C LS G CR Y +R+ ++ + C F YGGC NDN FHT Sbjct: 1150 PRCQLSFVQGSCRNYVIRWYYEKQSNSCAQFWYGGCDGNDNRFHT 1194
BLAST of SMED30002357 vs. Ensembl Zebrafish
Match: aplp2 (amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]) HSP 1 Score: 52.7582 bits (125), Expect = 7.000e-9 Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = -3 Query: 120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248 C+L ETG CRA R+ FD++ KC F+YGGC N NNF + Sbjct: 315 CSLEAETGPCRASMPRWHFDMQQRKCVRFIYGGCAGNRNNFDS 357
BLAST of SMED30002357 vs. Ensembl Zebrafish
Match: aplp2 (amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]) HSP 1 Score: 52.7582 bits (125), Expect = 7.008e-9 Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = -3 Query: 120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248 C+L ETG CRA R+ FD++ KC F+YGGC N NNF + Sbjct: 315 CSLEAETGPCRASMPRWHFDMQQRKCVRFIYGGCAGNRNNFDS 357
BLAST of SMED30002357 vs. Ensembl Zebrafish
Match: wfikkn2b (WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]) HSP 1 Score: 51.6026 bits (122), Expect = 1.730e-8 Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = -3 Query: 117 APECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 257 + C L + G C+AY +R+ + L +CR F+YGGC N+NNF ++ Sbjct: 372 SASCMLPIHKGPCKAYELRWAYSSTLHQCRLFIYGGCKANENNFKSK 418
BLAST of SMED30002357 vs. Ensembl Xenopus
Match: WFIKKN2 (WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:NCBI gene;Acc:100486381]) HSP 1 Score: 54.6842 bits (130), Expect = 2.323e-9 Identity = 22/54 (40.74%), Postives = 34/54 (62.96%), Query Frame = -3 Query: 117 LQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 278 L + G CN G+C+AY R+ ++ +L +C++F+YGGC NDNNF T+ Sbjct: 360 LTCMNGPVNVCNFPALQGMCKAYKPRWAYNKQLKQCQSFIYGGCGGNDNNFETK 413
BLAST of SMED30002357 vs. Ensembl Xenopus
Match: cmtr2 (cap methyltransferase 2 [Source:Xenbase;Acc:XB-GENE-6035233]) HSP 1 Score: 47.3654 bits (111), Expect = 4.851e-8 Identity = 20/44 (45.45%), Postives = 24/44 (54.55%), Query Frame = -3 Query: 117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248 C L + G C+A + FD GKC TF YGGC N N F+T Sbjct: 6 CRLPITPGPCKAAKTHWAFDAAQGKCVTFAYGGCQGNGNQFYTE 49
BLAST of SMED30002357 vs. Ensembl Xenopus
Match: cmtr2 (cap methyltransferase 2 [Source:Xenbase;Acc:XB-GENE-6035233]) HSP 1 Score: 46.595 bits (109), Expect = 8.406e-8 Identity = 20/44 (45.45%), Postives = 24/44 (54.55%), Query Frame = -3 Query: 117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248 C L + G C+A + FD GKC TF YGGC N N F+T Sbjct: 6 CRLPITPGPCKAAKTHWAFDAAQGKCVTFAYGGCQGNGNQFYTE 49
BLAST of SMED30002357 vs. Ensembl Xenopus
Match: rlbp1 (retinaldehyde binding protein 1 [Source:Xenbase;Acc:XB-GENE-976303]) HSP 1 Score: 49.2914 bits (116), Expect = 1.317e-7 Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = -3 Query: 114 ETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 233 +TG CRA F R+ +D + KC F YGGC NDNNFH + Sbjct: 363 DTGPCRASFSRFYYDPNIRKCLRFTYGGCAGNDNNFHRES 402
BLAST of SMED30002357 vs. Ensembl Xenopus
Match: rlbp1 (retinaldehyde binding protein 1 [Source:Xenbase;Acc:XB-GENE-976303]) HSP 1 Score: 49.2914 bits (116), Expect = 1.355e-7 Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = -3 Query: 114 ETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 233 +TG CRA F R+ +D + KC F YGGC NDNNFH + Sbjct: 380 DTGPCRASFSRFYYDPNIRKCLRFTYGGCAGNDNNFHRES 419
BLAST of SMED30002357 vs. Ensembl Mouse
Match: Spint3 (serine peptidase inhibitor, Kunitz type, 3 [Source:MGI Symbol;Acc:MGI:3651470]) HSP 1 Score: 52.7582 bits (125), Expect = 4.493e-10 Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = -3 Query: 114 APECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 257 P C L + G CRA FVR+ ++ K GKC F YGGC N+NNF +R+ Sbjct: 32 PPMCILPKDIGGCRAVFVRWYYNSKTGKCEWFRYGGCKGNENNFPSRS 79
BLAST of SMED30002357 vs. Ensembl Mouse
Match: Eppin (epididymal peptidase inhibitor [Source:MGI Symbol;Acc:MGI:1922776]) HSP 1 Score: 51.2174 bits (121), Expect = 5.417e-9 Identity = 21/61 (34.43%), Postives = 37/61 (60.66%), Query Frame = -3 Query: 114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296 C+F + + + C+L ++G C AYF R+ F+ + C+ F+YGGC N+NNF +++ Sbjct: 61 CVFNCGKKCLNPQQDICSLPKDSGYCMAYFRRWWFNKENSTCQVFIYGGCQGNNNNFQSQS 121
BLAST of SMED30002357 vs. Ensembl Mouse
Match: App (amyloid beta (A4) precursor protein [Source:MGI Symbol;Acc:MGI:88059]) HSP 1 Score: 50.8322 bits (120), Expect = 3.292e-8 Identity = 23/38 (60.53%), Postives = 24/38 (63.16%), Query Frame = -3 Query: 120 ETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 233 ETG CRA R+ FDV GKC F YGGC N NNF T Sbjct: 296 ETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDT 333
BLAST of SMED30002357 vs. Ensembl Mouse
Match: App (amyloid beta (A4) precursor protein [Source:MGI Symbol;Acc:MGI:88059]) HSP 1 Score: 50.8322 bits (120), Expect = 3.363e-8 Identity = 23/38 (60.53%), Postives = 24/38 (63.16%), Query Frame = -3 Query: 120 ETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 233 ETG CRA R+ FDV GKC F YGGC N NNF T Sbjct: 296 ETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDT 333
BLAST of SMED30002357 vs. Ensembl Mouse
Match: App (amyloid beta (A4) precursor protein [Source:MGI Symbol;Acc:MGI:88059]) HSP 1 Score: 50.8322 bits (120), Expect = 3.369e-8 Identity = 23/38 (60.53%), Postives = 24/38 (63.16%), Query Frame = -3 Query: 120 ETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 233 ETG CRA R+ FDV GKC F YGGC N NNF T Sbjct: 296 ETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDT 333
BLAST of SMED30002357 vs. UniProt/SwissProt
Match: sp|P81906|ISPI2_GALME (Inducible serine protease inhibitor 2 (Fragment) OS=Galleria mellonella OX=7137 PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 9.487e-13 Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = -3 Query: 126 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 254 P+C L LETG+CRA R+G+D KL +C FVYGGC N+NNF Sbjct: 3 PKCTLPLETGICRAELHRFGYDTKLKECTQFVYGGCHHNENNF 45
BLAST of SMED30002357 vs. UniProt/SwissProt
Match: sp|P0DJ50|VKT31_MESMA (Kunitz-type serine protease inhibitor BmKTT-2 OS=Mesobuthus martensii OX=34649 PE=2 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 1.774e-12 Identity = 25/68 (36.76%), Postives = 42/68 (61.76%), Query Frame = -3 Query: 114 NSLIIISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 317 N + ++ + + + + +C L +TG C+AYF+RY ++ K G+C+ FVYGGC N NNF T++ Sbjct: 3 NVITVVGIILSVVCTISDAEGVDCTLPSDTGRCKAYFIRYFYNQKAGECQKFVYGGCEGNSNNFLTKS 70
BLAST of SMED30002357 vs. UniProt/SwissProt
Match: sp|D8KY58|VKT_BOMTE (Kunitz-type serine protease inhibitor Bt-KTI OS=Bombus terrestris OX=30195 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 3.044e-11 Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = -3 Query: 126 ALQLIEGKAP-ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 281 ++ + + P C L L TG CR YF R+G++V++GKC F+YGGC N NNF Sbjct: 18 SVHQVSAEIPSHCTLPLATGTCRGYFPRFGYNVEMGKCVEFIYGGCDGNANNF 70
BLAST of SMED30002357 vs. UniProt/SwissProt
Match: sp|G3LH89|VKT_BOMIG (Kunitz-type serine protease inhibitor Bi-KTI OS=Bombus ignitus OX=130704 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.122e-11 Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = -3 Query: 126 ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 251 C LSL TG C+ YF R+G+++++GKC F+YGGC N NNF Sbjct: 29 HCTLSLATGTCKGYFPRFGYNIEMGKCVEFIYGGCDGNANNF 70
BLAST of SMED30002357 vs. UniProt/SwissProt
Match: sp|Q9BDL1|EPPI_MACMU (Eppin OS=Macaca mulatta OX=9544 GN=EPPIN PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 3.849e-10 Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = -3 Query: 114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296 C+F + ++ K C + ETG C A+F+R+ +D K C TFV+GGC N+NNF + A Sbjct: 61 CVFSCGKKCLDLKQDVCEMPNETGPCLAFFIRWWYDKKNNTCSTFVHGGCQGNNNNFQSEA 121
BLAST of SMED30002357 vs. TrEMBL
Match: A0A0R3WBP8 (BPTI/Kunitz inhibitor domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS8078 PE=4 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.193e-11 Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = -3 Query: 117 NSLIIISCLFV-AALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 317 +I LFV A+ L E + C L +E GLCRAY R+G+D + G+C F+YGGC N N+FH++ Sbjct: 19 TEMIATLALFVLVAISLTEARIDPCKLPIEPGLCRAYMPRWGYDQESGECVRFIYGGCGGNKNHFHSK 86
BLAST of SMED30002357 vs. TrEMBL
Match: A0A068Y467 (Trypsin inhibitor OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000419200 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.323e-10 Identity = 34/69 (49.28%), Postives = 40/69 (57.97%), Query Frame = -3 Query: 120 IIISCLFVAA---LQLIEGKAP---ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 308 II FVA+ L GK CNL + +G CR YF+RYG+D K +CR FVYGGC N NNF T Sbjct: 11 IIFFAFFVASMLNLGCCRGKMSYINRCNLPISSGRCRGYFLRYGYDSKTDECRRFVYGGCRGNRNNFFT 79
BLAST of SMED30002357 vs. TrEMBL
Match: E0A233 (Kunitz-type protease inhibitor OS=Galleria mellonella OX=7137 GN=KTPI PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 4.483e-10 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = -3 Query: 120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254 P+C L LETG+CRA R+G+D KL +C FVYGGC N+NNF + Sbjct: 22 PKCTLPLETGICRAELHRFGYDTKLKECTQFVYGGCHHNENNFKS 66
BLAST of SMED30002357 vs. TrEMBL
Match: A0A0R3SS90 (BPTI/Kunitz inhibitor domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS8135 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 5.788e-10 Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = -3 Query: 120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248 CN ++TG C AYF R+GFD +G+C F+YGGC N NNFH+ Sbjct: 5 CNQPIDTGRCMAYFPRWGFDRSMGRCIPFIYGGCKGNQNNFHS 47
BLAST of SMED30002357 vs. TrEMBL
Match: C7SCV7 (Collagen alpha-3(VI) chain OS=Echinococcus granulosus OX=6210 GN=EGR_07243 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.485e-10 Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = -3 Query: 117 LFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 293 + A+ E + C L L+ G CRAYF R+GF + G+C F+YGGC N N FH++ Sbjct: 8 FLLVAISFSEARIDPCKLPLDPGFCRAYFPRWGFHQESGECVRFIYGGCGGNKNQFHSK 66
BLAST of SMED30002357 vs. Ensembl Cavefish
Match: col28a2a (collagen alpha-1(XXVIII) chain-like [Source:NCBI gene;Acc:103029985]) HSP 1 Score: 54.6842 bits (130), Expect = 1.266e-9 Identity = 22/47 (46.81%), Postives = 27/47 (57.45%), Query Frame = -3 Query: 114 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 254 P C+LSL G CR Y +R+ +D C F YGGC N+N F T A Sbjct: 1192 PRCSLSLNQGPCREYLIRWYYDKAANSCAQFWYGGCEGNENRFETEA 1238
BLAST of SMED30002357 vs. Ensembl Cavefish
Match: wfikkn2b (WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2 [Source:NCBI gene;Acc:103024700]) HSP 1 Score: 53.5286 bits (127), Expect = 2.949e-9 Identity = 26/61 (42.62%), Postives = 36/61 (59.02%), Query Frame = -3 Query: 117 SCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 299 SCL +L A C+L G C+AY R+ + + LG+C+ F+YGGC N+NNF TR Sbjct: 361 SCLLSCQGEL----AVPCSLPSLQGPCKAYEPRWAYSITLGQCQPFIYGGCEGNENNFETR 417
BLAST of SMED30002357 vs. Ensembl Cavefish
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:103022515]) HSP 1 Score: 52.7582 bits (125), Expect = 5.927e-9 Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = -3 Query: 120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248 C+L ETG CRA R+ FD++ KC F+YGGC N NNF + Sbjct: 315 CSLEAETGPCRASMPRWHFDMQQRKCVRFIYGGCAGNRNNFDS 357
BLAST of SMED30002357 vs. Ensembl Cavefish
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:103022515]) HSP 1 Score: 52.7582 bits (125), Expect = 5.936e-9 Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = -3 Query: 120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248 C+L ETG CRA R+ FD++ KC F+YGGC N NNF + Sbjct: 315 CSLEAETGPCRASMPRWHFDMQQRKCVRFIYGGCAGNRNNFDS 357
BLAST of SMED30002357 vs. Ensembl Cavefish
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:103022515]) HSP 1 Score: 52.7582 bits (125), Expect = 5.943e-9 Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = -3 Query: 120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248 C+L ETG CRA R+ FD++ KC F+YGGC N NNF + Sbjct: 315 CSLEAETGPCRASMPRWHFDMQQRKCVRFIYGGCAGNRNNFDS 357
BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Match: tfpi2 (tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]) HSP 1 Score: 51.9878 bits (123), Expect = 1.440e-9 Identity = 24/64 (37.50%), Postives = 37/64 (57.81%), Query Frame = -3 Query: 120 ISCLFVAALQLI---EGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 302 + C++++ Q + E + C L + G CRA F RY F+ +C +F+YGGC N+NNF T Sbjct: 6 VQCMYLSESQCVFTLEDQRVTCTLPAKPGDCRAAFPRYFFNRSTLRCESFIYGGCHSNENNFET 69 HSP 2 Score: 48.9062 bits (115), Expect = 1.641e-8 Identity = 24/54 (44.44%), Postives = 30/54 (55.56%), Query Frame = -3 Query: 123 AALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFH 284 AA I+ C ETG CRA+ RY +++ LG C FVYGGC N+N F Sbjct: 75 AACSFIKKIPKLCRPDAETGRCRAHITRYFYNMTLGMCMPFVYGGCGGNNNRFE 128
BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005043.1 (pep scaffold:Pmarinus_7.0:GL481015:31246:35903:1 gene:ENSPMAG00000004579.1 transcript:ENSPMAT00000005043.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 46.595 bits (109), Expect = 1.370e-7 Identity = 25/59 (42.37%), Postives = 31/59 (52.54%), Query Frame = -3 Query: 114 FVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 290 + L+ KA C L +E G+CRA RY F++ G C F YGGC N NNF A Sbjct: 62 LASPCPLVAPKA--CRLDMEVGVCRALLRRYFFNMTSGSCEEFGYGGCQGNLNNFKDAA 118
BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005038.1 (pep scaffold:Pmarinus_7.0:GL481015:31246:35903:1 gene:ENSPMAG00000004579.1 transcript:ENSPMAT00000005038.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 46.2098 bits (108), Expect = 1.681e-7 Identity = 24/49 (48.98%), Postives = 29/49 (59.18%), Query Frame = -3 Query: 114 APE-CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 257 AP+ C L +E G+CRA RY F++ G C F YGGC N NNF A Sbjct: 71 APKACRLDMEVGVCRALLRRYFFNMTSGSCEEFGYGGCQGNLNNFKDAA 119
BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Match: WFIKKN1 (WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30912]) HSP 1 Score: 46.2098 bits (108), Expect = 1.957e-7 Identity = 15/44 (34.09%), Postives = 32/44 (72.73%), Query Frame = -3 Query: 117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248 C+L ++ G C+ + +R+ ++ + +C++F+YGGC N+NNF ++ Sbjct: 374 CSLPVQQGPCKQWALRWAYNPLIKRCQSFIYGGCEGNENNFQSQ 417
BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009465.1 (pep scaffold:Pmarinus_7.0:GL478507:22936:25713:-1 gene:ENSPMAG00000008558.1 transcript:ENSPMAT00000009465.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 43.5134 bits (101), Expect = 1.499e-6 Identity = 20/45 (44.44%), Postives = 24/45 (53.33%), Query Frame = -3 Query: 114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248 C L+ TG CR F R+ +D C+ F YGGC N NNF A Sbjct: 1 CLLNPTTGPCRGSFTRWTYDAATSTCKEFTYGGCRGNQNNFLEEA 45 HSP 2 Score: 43.1282 bits (100), Expect = 2.399e-6 Identity = 23/62 (37.10%), Postives = 30/62 (48.39%), Query Frame = -3 Query: 126 LIIISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 311 +I SC L ++ C L T CR F R+ +D + G C+ F YGGC N NNF Sbjct: 148 FLISSCWMTRRLFHVQ---DVCLLEAVTSPCRGSFTRWTYDAESGHCKEFTYGGCGGNFNNF 206
BLAST of SMED30002357 vs. Ensembl Nematostella
Match: EDO41696 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S3T1]) HSP 1 Score: 49.6766 bits (117), Expect = 1.246e-9 Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = -3 Query: 114 ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 251 EC TG CRAYF R+ ++ KC+ FVYGGC N NNF ++A Sbjct: 1 ECLQPKLTGPCRAYFERWFYNQTSRKCKQFVYGGCQGNSNNFESKA 46
BLAST of SMED30002357 vs. Ensembl Nematostella
Match: EDO26263 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S3T1]) HSP 1 Score: 49.6766 bits (117), Expect = 1.246e-9 Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = -3 Query: 114 ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 251 EC TG CRAYF R+ ++ KC+ FVYGGC N NNF ++A Sbjct: 1 ECLQPKLTGPCRAYFERWFYNQTSRKCKQFVYGGCQGNSNNFESKA 46
BLAST of SMED30002357 vs. Ensembl Nematostella
Match: EDO38466 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCV3]) HSP 1 Score: 49.6766 bits (117), Expect = 1.403e-9 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = -3 Query: 114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248 C+L TG C A F+R+ +D++ +C+ F YGGC N NNF ++A Sbjct: 15 CSLPKLTGPCMARFIRWHYDMRSSECKMFTYGGCQGNANNFESKA 59
BLAST of SMED30002357 vs. Ensembl Nematostella
Match: EDO26072 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TCY8]) HSP 1 Score: 49.6766 bits (117), Expect = 1.562e-9 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = -3 Query: 114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248 C+L TG C A F+R+ +D++ +C+ F YGGC N NNF ++A Sbjct: 15 CSLPKLTGPCMARFIRWHYDMRSSECKMFTYGGCQGNANNFESKA 59
BLAST of SMED30002357 vs. Ensembl Nematostella
Match: EDO29819 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T2J6]) HSP 1 Score: 48.521 bits (114), Expect = 4.424e-9 Identity = 22/43 (51.16%), Postives = 26/43 (60.47%), Query Frame = -3 Query: 120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248 C L + G CRA R F+ + GKC F+YGGC N NNFHT Sbjct: 14 CTLPKKVGDCRAAMPRVFFNSQSGKCEDFIYGGCGGNANNFHT 56
BLAST of SMED30002357 vs. Ensembl Medaka
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:101168561]) HSP 1 Score: 52.7582 bits (125), Expect = 6.180e-9 Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = -3 Query: 120 QLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 275 +++E C L ETG CRA R+ FD+ KC F+YGGC N NNF + Sbjct: 305 KIVEEVKAVCTLEAETGPCRASMPRWHFDLSQRKCVRFIYGGCAGNRNNFDS 356
BLAST of SMED30002357 vs. Ensembl Medaka
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:101168561]) HSP 1 Score: 52.7582 bits (125), Expect = 6.189e-9 Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = -3 Query: 120 QLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 275 +++E C L ETG CRA R+ FD+ KC F+YGGC N NNF + Sbjct: 305 KIVEEVKAVCTLEAETGPCRASMPRWHFDLSQRKCVRFIYGGCAGNRNNFDS 356
BLAST of SMED30002357 vs. Ensembl Medaka
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:101168561]) HSP 1 Score: 52.7582 bits (125), Expect = 6.196e-9 Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = -3 Query: 120 QLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 275 +++E C L ETG CRA R+ FD+ KC F+YGGC N NNF + Sbjct: 305 KIVEEVKAVCTLEAETGPCRASMPRWHFDLSQRKCVRFIYGGCAGNRNNFDS 356
BLAST of SMED30002357 vs. Ensembl Medaka
Match: col28a2a (collagen alpha-1(XXVIII) chain [Source:NCBI gene;Acc:101157899]) HSP 1 Score: 52.373 bits (124), Expect = 9.130e-9 Identity = 19/47 (40.43%), Postives = 29/47 (61.70%), Query Frame = -3 Query: 114 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 254 P C+++L+ G CR Y +R+ +D + C F YGGC N+N F T + Sbjct: 968 PRCSITLDQGTCRDYVIRWYYDQQANACAQFWYGGCGGNENRFETES 1014
BLAST of SMED30002357 vs. Ensembl Medaka
Match: ENSORLT00000040309.1 (pep primary_assembly:ASM223467v1:11:20946373:20947959:-1 gene:ENSORLG00000024141.1 transcript:ENSORLT00000040309.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 46.2098 bits (108), Expect = 7.403e-8 Identity = 21/43 (48.84%), Postives = 25/43 (58.14%), Query Frame = -3 Query: 120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248 C+ L+ G CR Y VR+ FD + C F YGGC N NNF T Sbjct: 8 CSQPLDPGPCRLYRVRWYFDPQANSCAQFWYGGCHGNQNNFET 50
BLAST of SMED30002357 vs. Planmine SMEST
Match: SMESG000038055.1 (SMESG000038055.1) HSP 1 Score: 140.198 bits (352), Expect = 8.445e-45 Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = -3 Query: 114 NSLIIISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 317 NSLIIISCLFV ALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA Sbjct: 2 NSLIIISCLFVTALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 69
BLAST of SMED30002357 vs. Planmine SMEST
Match: SMESG000038052.1 (SMESG000038052.1) HSP 1 Score: 124.79 bits (312), Expect = 9.654e-39 Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = -3 Query: 114 NSLIIISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 317 NSL+I SC+FVA LQL E K+PECNL LETGLC AYFVRYGFDVKLGKCRTFVYGGC VNDNNFHTRA Sbjct: 2 NSLVIFSCIFVAVLQLTESKSPECNLPLETGLCEAYFVRYGFDVKLGKCRTFVYGGCHVNDNNFHTRA 69
BLAST of SMED30002357 vs. Planmine SMEST
Match: SMESG000038005.1 (SMESG000038005.1) HSP 1 Score: 86.6557 bits (213), Expect = 1.779e-23 Identity = 42/64 (65.62%), Postives = 45/64 (70.31%), Query Frame = -3 Query: 114 IISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 305 II LFV L IE K PECN LE GLCR Y VRYG+ V+ G+C TF YGGCP NDNNF TRA Sbjct: 4 IIFLLFVTILSCIECKEPECNQPLEIGLCRQYRVRYGYSVERGRCVTFTYGGCPYNDNNFFTRA 67
BLAST of SMED30002357 vs. Planmine SMEST
Match: SMESG000037991.1 (SMESG000037991.1) HSP 1 Score: 83.5741 bits (205), Expect = 1.961e-22 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = -3 Query: 114 ALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 281 E +APECN ++ETGLC AYF+RYGFD KLG+C F+YGGCPVN NNF T+ Sbjct: 14 TFNFSESRAPECNDTIETGLCDAYFIRYGFDTKLGECIQFIYGGCPVNKNNFKTKE 69
BLAST of SMED30002357 vs. Planmine SMEST
Match: SMESG000037994.1 (SMESG000037994.1) HSP 1 Score: 73.1738 bits (178), Expect = 2.072e-18 Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = -3 Query: 120 NSLIIISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 317 NS++I + +F L E +APECN +TG+C AYF R+ F+++ G C +F+YGGC N NNF+T Sbjct: 2 NSIVIFTLIFCVIFSLGESRAPECNEPKKTGMCAAYFPRFYFNIQSGNCESFIYGGCQANGNNFNT 67 The following BLAST results are available for this feature:
BLAST of SMED30002357 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SMED30002357 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of SMED30002357 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of SMED30002357 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SMED30002357 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SMED30002357 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SMED30002357 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30002357 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30002357 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of SMED30002357 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30002357 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of SMED30002357 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SMED30002357 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30002357 ID=SMED30002357|Name=SMED30002357|organism=Schmidtea mediterranea sexual|type=transcript|length=334bpback to top Annotated Terms
The following terms have been associated with this transcript:
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