SMED30002357

Overview


Name	SMED30002357
Smed ID	SMED30002357
Length (bp)	334

Neoblast Clusters

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30002357

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 12

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
tail region	SMED30002357	SMESG000038055.1	SmedASXL_006304	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
tail region	SMED30002357	SMESG000038055.1 SMESG000038052.1	SmedASXL_061222	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
pigment cell	SMED30002357	SMESG000038055.1 SMESG000038052.1	SmedASXL_061222	SmedAsxl_ww_GCZZ01	PMID:29158443 He et al., 2017
nervous system	SMED30002357	SMESG000038052.1	dd_Smed_v4_101_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30002357	SMESG000038052.1	dd_Smed_v4_101_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30002357	SMESG000038052.1	dd_Smed_v4_101_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30002357	SMESG000038052.1	dd_Smed_v4_101_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30002357	SMESG000038052.1	dd_Smed_v4_101_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30002357	SMESG000038055.1	Contig41457	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30002357	SMESG000038055.1	Contig41457	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
tail region	SMED30002357	SMESG000038052.1	dd_Smed_v6_101_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017
goblet cell	SMED30002357	SMESG000038055.1 SMESG000038052.1	dd_Smed_v6_101_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018

Note: Hover over icons to view figure legend

Alignments

SMED30002357 aligns in the following genomic locations:


Alignment Location	Alignment Score
v31.020740:4892..5251 -	1472

Homology

[Close]

BLAST of SMED30002357 vs. Ensembl Human
Match: EPPIN (epididymal peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:15932])

HSP 1 Score: 56.225 bits (134), Expect = 6.284e-11
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = -3

Query:  114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296
            C+F    + ++ K   C +  ETG C AYF+ + +D K   C  FVYGGC  N+NNF ++A
Sbjct:   45 CVFSCGKKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKA 105

[Close]

BLAST of SMED30002357 vs. Ensembl Human
Match: EPPIN (epididymal peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:15932])

HSP 1 Score: 56.225 bits (134), Expect = 9.110e-11
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = -3

Query:  114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296
            C+F    + ++ K   C +  ETG C AYF+ + +D K   C  FVYGGC  N+NNF ++A
Sbjct:   61 CVFSCGKKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKA 121

[Close]

BLAST of SMED30002357 vs. Ensembl Human
Match: EPPIN-WFDC6 (EPPIN-WFDC6 readthrough [Source:HGNC Symbol;Acc:HGNC:38825])

HSP 1 Score: 56.225 bits (134), Expect = 2.095e-10
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = -3

Query:  114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296
            C+F    + ++ K   C +  ETG C AYF+ + +D K   C  FVYGGC  N+NNF ++A
Sbjct:   61 CVFSCGKKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKA 121

[Close]

BLAST of SMED30002357 vs. Ensembl Human
Match: EPPIN-WFDC6 (EPPIN-WFDC6 readthrough [Source:HGNC Symbol;Acc:HGNC:38825])

HSP 1 Score: 56.225 bits (134), Expect = 2.405e-10
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = -3

Query:  114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296
            C+F    + ++ K   C +  ETG C AYF+ + +D K   C  FVYGGC  N+NNF ++A
Sbjct:   61 CVFSCGKKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKA 121

[Close]

BLAST of SMED30002357 vs. Ensembl Human
Match: WFIKKN2 (WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30916])

HSP 1 Score: 52.7582 bits (125), Expect = 9.629e-9
Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = -3

Query:  117 LQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 278
            L  + G    C+L    G C+AY  R+ ++ + G+C++FVYGGC  N NNF +R
Sbjct:  283 LACMSGPLAACSLPALQGPCKAYAPRWAYNSQTGQCQSFVYGGCEGNGNNFESR 336

[Close]

BLAST of SMED30002357 vs. Ensembl Celegans
Match: mlt-11 (pep chromosome:WBcel235:V:20667211:20678513:1 gene:WBGene00012186.1 transcript:W01F3.3b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mlt-11)

HSP 1 Score: 51.2174 bits (121), Expect = 1.344e-8
Identity = 22/49 (44.90%), Postives = 27/49 (55.10%), Query Frame = -3

Query:  120 KAP--ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 260
            K+P   C   +E G C   F R+ FD  +  CR+F YGGC  N NNF T
Sbjct:  860 KSPVATCEADIEVGECAGVFSRFAFDKSINACRSFTYGGCGGNANNFAT 908

HSP 2 Score: 50.447 bits (119), Expect = 2.602e-8
Identity = 22/54 (40.74%), Postives = 30/54 (55.56%), Query Frame = -3

Query:  126 VAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 287
            V  LQ    +A  C+L  E G C  Y +R+ F+  L +C+ F +GGC  N NNF
Sbjct:  526 VVGLQTSGARATRCSLPKERGPCDKYELRFYFNADLNECKYFFWGGCEGNQNNF 579

HSP 3 Score: 44.2838 bits (103), Expect = 3.543e-6
Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3

Query:  117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248
            C +  + G+C  Y  R+ F+ + G+C  F YG C  N+NNF  R
Sbjct: 2177 CAMPPDAGVCTNYTPRWFFNSQTGQCEQFAYGSCGGNENNFFDR 2220

[Close]

BLAST of SMED30002357 vs. Ensembl Celegans
Match: mlt-11 (pep chromosome:WBcel235:V:20667211:20678513:1 gene:WBGene00012186.1 transcript:W01F3.3d.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mlt-11)

HSP 1 Score: 51.2174 bits (121), Expect = 1.357e-8
Identity = 22/49 (44.90%), Postives = 27/49 (55.10%), Query Frame = -3

Query:  120 KAP--ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 260
            K+P   C   +E G C   F R+ FD  +  CR+F YGGC  N NNF T
Sbjct:  851 KSPVATCEADIEVGECAGVFSRFAFDKSINACRSFTYGGCGGNANNFAT 899

HSP 2 Score: 50.447 bits (119), Expect = 2.577e-8
Identity = 22/54 (40.74%), Postives = 30/54 (55.56%), Query Frame = -3

Query:  126 VAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 287
            V  LQ    +A  C+L  E G C  Y +R+ F+  L +C+ F +GGC  N NNF
Sbjct:  526 VVGLQTSGARATRCSLPKERGPCDKYELRFYFNADLNECKYFFWGGCEGNQNNF 579

HSP 3 Score: 44.2838 bits (103), Expect = 3.543e-6
Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3

Query:  117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248
            C +  + G+C  Y  R+ F+ + G+C  F YG C  N+NNF  R
Sbjct: 2168 CAMPPDAGVCTNYTPRWFFNSQTGQCEQFAYGSCGGNENNFFDR 2211

[Close]

BLAST of SMED30002357 vs. Ensembl Celegans
Match: mlt-11 (pep chromosome:WBcel235:V:20667209:20678513:1 gene:WBGene00012186.1 transcript:W01F3.3c.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mlt-11)

HSP 1 Score: 51.2174 bits (121), Expect = 1.615e-8
Identity = 22/49 (44.90%), Postives = 27/49 (55.10%), Query Frame = -3

Query:  120 KAP--ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 260
            K+P   C   +E G C   F R+ FD  +  CR+F YGGC  N NNF T
Sbjct:  731 KSPVATCEADIEVGECAGVFSRFAFDKSINACRSFTYGGCGGNANNFAT 779

HSP 2 Score: 50.447 bits (119), Expect = 2.979e-8
Identity = 22/54 (40.74%), Postives = 30/54 (55.56%), Query Frame = -3

Query:  126 VAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 287
            V  LQ    +A  C+L  E G C  Y +R+ F+  L +C+ F +GGC  N NNF
Sbjct:  397 VVGLQTSGARATRCSLPKERGPCDKYELRFYFNADLNECKYFFWGGCEGNQNNF 450

HSP 3 Score: 44.2838 bits (103), Expect = 4.135e-6
Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3

Query:  117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248
            C +  + G+C  Y  R+ F+ + G+C  F YG C  N+NNF  R
Sbjct: 2048 CAMPPDAGVCTNYTPRWFFNSQTGQCEQFAYGSCGGNENNFFDR 2091

[Close]

BLAST of SMED30002357 vs. Ensembl Celegans
Match: mlt-11 (pep chromosome:WBcel235:V:20667211:20678513:1 gene:WBGene00012186.1 transcript:W01F3.3e.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mlt-11)

HSP 1 Score: 50.447 bits (119), Expect = 2.722e-8
Identity = 20/43 (46.51%), Postives = 24/43 (55.81%), Query Frame = -3

Query:  120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248
            C   +E G C   F R+ FD  +  CR+F YGGC  N NNF T
Sbjct:  866 CEADIEVGECAGVFSRFAFDKSINACRSFTYGGCGGNANNFAT 908

HSP 2 Score: 49.6766 bits (117), Expect = 4.511e-8
Identity = 22/54 (40.74%), Postives = 30/54 (55.56%), Query Frame = -3

Query:  126 VAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 287
            V  LQ    +A  C+L  E G C  Y +R+ F+  L +C+ F +GGC  N NNF
Sbjct:  526 VVGLQTSGARATRCSLPKERGPCDKYELRFYFNADLNECKYFFWGGCEGNQNNF 579

HSP 3 Score: 43.8986 bits (102), Expect = 5.735e-6
Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3

Query:  117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248
            C +  + G+C  Y  R+ F+ + G+C  F YG C  N+NNF  R
Sbjct: 1651 CAMPPDAGVCTNYTPRWFFNSQTGQCEQFAYGSCGGNENNFFDR 1694

[Close]

BLAST of SMED30002357 vs. Ensembl Celegans
Match: mlt-11 (pep chromosome:WBcel235:V:20667209:20678513:1 gene:WBGene00012186.1 transcript:W01F3.3h.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mlt-11)

HSP 1 Score: 50.447 bits (119), Expect = 2.856e-8
Identity = 20/43 (46.51%), Postives = 24/43 (55.81%), Query Frame = -3

Query:  120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248
            C   +E G C   F R+ FD  +  CR+F YGGC  N NNF T
Sbjct:  645 CEADIEVGECAGVFSRFAFDKSINACRSFTYGGCGGNANNFAT 687

HSP 2 Score: 49.6766 bits (117), Expect = 4.825e-8
Identity = 22/54 (40.74%), Postives = 30/54 (55.56%), Query Frame = -3

Query:  126 VAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 287
            V  LQ    +A  C+L  E G C  Y +R+ F+  L +C+ F +GGC  N NNF
Sbjct:  305 VVGLQTSGARATRCSLPKERGPCDKYELRFYFNADLNECKYFFWGGCEGNQNNF 358

HSP 3 Score: 43.8986 bits (102), Expect = 6.134e-6
Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3

Query:  117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248
            C +  + G+C  Y  R+ F+ + G+C  F YG C  N+NNF  R
Sbjct: 1575 CAMPPDAGVCTNYTPRWFFNSQTGQCEQFAYGSCGGNENNFFDR 1618

[Close]

BLAST of SMED30002357 vs. Ensembl Fly
Match: CG3604 (gene:FBgn0031562 transcript:FBtr0077545)

HSP 1 Score: 50.447 bits (119), Expect = 8.420e-9
Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = -3

Query:  117 ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 251
            +C+   ETG C A F RY ++V    C  FVYGGC  N NNF ++
Sbjct:   54 DCHQPKETGRCFALFYRYAYNVDTQSCEEFVYGGCAGNKNNFESK 98

[Close]

BLAST of SMED30002357 vs. Ensembl Fly
Match: CG3604 (gene:FBgn0031562 transcript:FBtr0346581)

HSP 1 Score: 50.447 bits (119), Expect = 8.420e-9
Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = -3

Query:  117 ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 251
            +C+   ETG C A F RY ++V    C  FVYGGC  N NNF ++
Sbjct:   54 DCHQPKETGRCFALFYRYAYNVDTQSCEEFVYGGCAGNKNNFESK 98

[Close]

BLAST of SMED30002357 vs. Ensembl Fly
Match: Ppn (gene:FBgn0003137 transcript:FBtr0300337)

HSP 1 Score: 50.447 bits (119), Expect = 3.182e-8
Identity = 23/45 (51.11%), Postives = 25/45 (55.56%), Query Frame = -3

Query:  114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248
            C L  ETG C  Y V+Y FD   G C  F YGGC  NDN F + A
Sbjct: 1612 CGLPKETGTCNNYSVKYYFDTSYGGCARFWYGGCDGNDNRFESEA 1656

HSP 2 Score: 43.8986 bits (102), Expect = 6.838e-6
Identity = 19/45 (42.22%), Postives = 25/45 (55.56%), Query Frame = -3

Query:  120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254
            P C   +E+G C   F R+ +D +   CR F YGGC  N NN+ T
Sbjct: 1728 PTCEQPVESGPCAGNFERWYYDNETDICRPFTYGGCKGNKNNYPT 1772

[Close]

BLAST of SMED30002357 vs. Ensembl Fly
Match: Ppn (gene:FBgn0003137 transcript:FBtr0301839)

HSP 1 Score: 50.447 bits (119), Expect = 3.776e-8
Identity = 23/45 (51.11%), Postives = 25/45 (55.56%), Query Frame = -3

Query:  114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248
            C L  ETG C  Y V+Y FD   G C  F YGGC  NDN F + A
Sbjct: 1612 CGLPKETGTCNNYSVKYYFDTSYGGCARFWYGGCDGNDNRFESEA 1656

HSP 2 Score: 43.5134 bits (101), Expect = 8.112e-6
Identity = 19/45 (42.22%), Postives = 25/45 (55.56%), Query Frame = -3

Query:  120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254
            P C   +E+G C   F R+ +D +   CR F YGGC  N NN+ T
Sbjct: 1728 PTCEQPVESGPCAGNFERWYYDNETDICRPFTYGGCKGNKNNYPT 1772

[Close]

BLAST of SMED30002357 vs. Ensembl Fly
Match: Ppn (gene:FBgn0003137 transcript:FBtr0301838)

HSP 1 Score: 50.447 bits (119), Expect = 3.812e-8
Identity = 23/45 (51.11%), Postives = 25/45 (55.56%), Query Frame = -3

Query:  114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248
            C L  ETG C  Y V+Y FD   G C  F YGGC  NDN F + A
Sbjct: 1612 CGLPKETGTCNNYSVKYYFDTSYGGCARFWYGGCDGNDNRFESEA 1656

HSP 2 Score: 43.5134 bits (101), Expect = 8.187e-6
Identity = 19/45 (42.22%), Postives = 25/45 (55.56%), Query Frame = -3

Query:  120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254
            P C   +E+G C   F R+ +D +   CR F YGGC  N NN+ T
Sbjct: 1728 PTCEQPVESGPCAGNFERWYYDNETDICRPFTYGGCKGNKNNYPT 1772

[Close]

BLAST of SMED30002357 vs. Ensembl Zebrafish
Match: col28a2a (collagen, type XXVIII, alpha 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4444])

HSP 1 Score: 53.1434 bits (126), Expect = 4.469e-9
Identity = 21/45 (46.67%), Postives = 26/45 (57.78%), Query Frame = -3

Query:  120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254
            P C LS   G CR Y +R+ ++ +   C  F YGGC  NDN FHT
Sbjct: 1134 PRCQLSFVQGSCRNYVIRWYYEKQSNSCAQFWYGGCDGNDNRFHT 1178

[Close]

BLAST of SMED30002357 vs. Ensembl Zebrafish
Match: col28a2a (collagen, type XXVIII, alpha 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4444])

HSP 1 Score: 53.1434 bits (126), Expect = 4.472e-9
Identity = 21/45 (46.67%), Postives = 26/45 (57.78%), Query Frame = -3

Query:  120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254
            P C LS   G CR Y +R+ ++ +   C  F YGGC  NDN FHT
Sbjct: 1150 PRCQLSFVQGSCRNYVIRWYYEKQSNSCAQFWYGGCDGNDNRFHT 1194

[Close]

BLAST of SMED30002357 vs. Ensembl Zebrafish
Match: aplp2 (amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28])

HSP 1 Score: 52.7582 bits (125), Expect = 7.000e-9
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = -3

Query:  120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248
            C+L  ETG CRA   R+ FD++  KC  F+YGGC  N NNF +
Sbjct:  315 CSLEAETGPCRASMPRWHFDMQQRKCVRFIYGGCAGNRNNFDS 357

[Close]

BLAST of SMED30002357 vs. Ensembl Zebrafish
Match: aplp2 (amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28])

HSP 1 Score: 52.7582 bits (125), Expect = 7.008e-9
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = -3

Query:  120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248
            C+L  ETG CRA   R+ FD++  KC  F+YGGC  N NNF +
Sbjct:  315 CSLEAETGPCRASMPRWHFDMQQRKCVRFIYGGCAGNRNNFDS 357

[Close]

BLAST of SMED30002357 vs. Ensembl Zebrafish
Match: wfikkn2b (WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1])

HSP 1 Score: 51.6026 bits (122), Expect = 1.730e-8
Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = -3

Query:  117 APECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 257
            +  C L +  G C+AY +R+ +   L +CR F+YGGC  N+NNF ++
Sbjct:  372 SASCMLPIHKGPCKAYELRWAYSSTLHQCRLFIYGGCKANENNFKSK 418

[Close]

BLAST of SMED30002357 vs. Ensembl Xenopus
Match: WFIKKN2 (WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:NCBI gene;Acc:100486381])

HSP 1 Score: 54.6842 bits (130), Expect = 2.323e-9
Identity = 22/54 (40.74%), Postives = 34/54 (62.96%), Query Frame = -3

Query:  117 LQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 278
            L  + G    CN     G+C+AY  R+ ++ +L +C++F+YGGC  NDNNF T+
Sbjct:  360 LTCMNGPVNVCNFPALQGMCKAYKPRWAYNKQLKQCQSFIYGGCGGNDNNFETK 413

[Close]

BLAST of SMED30002357 vs. Ensembl Xenopus
Match: cmtr2 (cap methyltransferase 2 [Source:Xenbase;Acc:XB-GENE-6035233])

HSP 1 Score: 47.3654 bits (111), Expect = 4.851e-8
Identity = 20/44 (45.45%), Postives = 24/44 (54.55%), Query Frame = -3

Query:  117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248
            C L +  G C+A    + FD   GKC TF YGGC  N N F+T 
Sbjct:    6 CRLPITPGPCKAAKTHWAFDAAQGKCVTFAYGGCQGNGNQFYTE 49

[Close]

BLAST of SMED30002357 vs. Ensembl Xenopus
Match: cmtr2 (cap methyltransferase 2 [Source:Xenbase;Acc:XB-GENE-6035233])

HSP 1 Score: 46.595 bits (109), Expect = 8.406e-8
Identity = 20/44 (45.45%), Postives = 24/44 (54.55%), Query Frame = -3

Query:  117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248
            C L +  G C+A    + FD   GKC TF YGGC  N N F+T 
Sbjct:    6 CRLPITPGPCKAAKTHWAFDAAQGKCVTFAYGGCQGNGNQFYTE 49

[Close]

BLAST of SMED30002357 vs. Ensembl Xenopus
Match: rlbp1 (retinaldehyde binding protein 1 [Source:Xenbase;Acc:XB-GENE-976303])

HSP 1 Score: 49.2914 bits (116), Expect = 1.317e-7
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = -3

Query:  114 ETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 233
            +TG CRA F R+ +D  + KC  F YGGC  NDNNFH  +
Sbjct:  363 DTGPCRASFSRFYYDPNIRKCLRFTYGGCAGNDNNFHRES 402

[Close]

BLAST of SMED30002357 vs. Ensembl Xenopus
Match: rlbp1 (retinaldehyde binding protein 1 [Source:Xenbase;Acc:XB-GENE-976303])

HSP 1 Score: 49.2914 bits (116), Expect = 1.355e-7
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = -3

Query:  114 ETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 233
            +TG CRA F R+ +D  + KC  F YGGC  NDNNFH  +
Sbjct:  380 DTGPCRASFSRFYYDPNIRKCLRFTYGGCAGNDNNFHRES 419

[Close]

BLAST of SMED30002357 vs. Ensembl Mouse
Match: Spint3 (serine peptidase inhibitor, Kunitz type, 3 [Source:MGI Symbol;Acc:MGI:3651470])

HSP 1 Score: 52.7582 bits (125), Expect = 4.493e-10
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = -3

Query:  114 APECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 257
             P C L  + G CRA FVR+ ++ K GKC  F YGGC  N+NNF +R+
Sbjct:   32 PPMCILPKDIGGCRAVFVRWYYNSKTGKCEWFRYGGCKGNENNFPSRS 79

[Close]

BLAST of SMED30002357 vs. Ensembl Mouse
Match: Eppin (epididymal peptidase inhibitor [Source:MGI Symbol;Acc:MGI:1922776])

HSP 1 Score: 51.2174 bits (121), Expect = 5.417e-9
Identity = 21/61 (34.43%), Postives = 37/61 (60.66%), Query Frame = -3

Query:  114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296
            C+F    + +  +   C+L  ++G C AYF R+ F+ +   C+ F+YGGC  N+NNF +++
Sbjct:   61 CVFNCGKKCLNPQQDICSLPKDSGYCMAYFRRWWFNKENSTCQVFIYGGCQGNNNNFQSQS 121

[Close]

BLAST of SMED30002357 vs. Ensembl Mouse
Match: App (amyloid beta (A4) precursor protein [Source:MGI Symbol;Acc:MGI:88059])

HSP 1 Score: 50.8322 bits (120), Expect = 3.292e-8
Identity = 23/38 (60.53%), Postives = 24/38 (63.16%), Query Frame = -3

Query:  120 ETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 233
            ETG CRA   R+ FDV  GKC  F YGGC  N NNF T
Sbjct:  296 ETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDT 333

[Close]

BLAST of SMED30002357 vs. Ensembl Mouse
Match: App (amyloid beta (A4) precursor protein [Source:MGI Symbol;Acc:MGI:88059])

HSP 1 Score: 50.8322 bits (120), Expect = 3.363e-8
Identity = 23/38 (60.53%), Postives = 24/38 (63.16%), Query Frame = -3

Query:  120 ETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 233
            ETG CRA   R+ FDV  GKC  F YGGC  N NNF T
Sbjct:  296 ETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDT 333

[Close]

BLAST of SMED30002357 vs. Ensembl Mouse
Match: App (amyloid beta (A4) precursor protein [Source:MGI Symbol;Acc:MGI:88059])

HSP 1 Score: 50.8322 bits (120), Expect = 3.369e-8
Identity = 23/38 (60.53%), Postives = 24/38 (63.16%), Query Frame = -3

Query:  120 ETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 233
            ETG CRA   R+ FDV  GKC  F YGGC  N NNF T
Sbjct:  296 ETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDT 333

[Close]

BLAST of SMED30002357 vs. UniProt/SwissProt
Match: sp|P81906|ISPI2_GALME (Inducible serine protease inhibitor 2 (Fragment) OS=Galleria mellonella OX=7137 PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 9.487e-13
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = -3

Query:  126 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 254
            P+C L LETG+CRA   R+G+D KL +C  FVYGGC  N+NNF
Sbjct:    3 PKCTLPLETGICRAELHRFGYDTKLKECTQFVYGGCHHNENNF 45

[Close]

BLAST of SMED30002357 vs. UniProt/SwissProt
Match: sp|P0DJ50|VKT31_MESMA (Kunitz-type serine protease inhibitor BmKTT-2 OS=Mesobuthus martensii OX=34649 PE=2 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 1.774e-12
Identity = 25/68 (36.76%), Postives = 42/68 (61.76%), Query Frame = -3

Query:  114 NSLIIISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 317
            N + ++  +      + + +  +C L  +TG C+AYF+RY ++ K G+C+ FVYGGC  N NNF T++
Sbjct:    3 NVITVVGIILSVVCTISDAEGVDCTLPSDTGRCKAYFIRYFYNQKAGECQKFVYGGCEGNSNNFLTKS 70

[Close]

BLAST of SMED30002357 vs. UniProt/SwissProt
Match: sp|D8KY58|VKT_BOMTE (Kunitz-type serine protease inhibitor Bt-KTI OS=Bombus terrestris OX=30195 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.044e-11
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = -3

Query:  126 ALQLIEGKAP-ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 281
            ++  +  + P  C L L TG CR YF R+G++V++GKC  F+YGGC  N NNF
Sbjct:   18 SVHQVSAEIPSHCTLPLATGTCRGYFPRFGYNVEMGKCVEFIYGGCDGNANNF 70

[Close]

BLAST of SMED30002357 vs. UniProt/SwissProt
Match: sp|G3LH89|VKT_BOMIG (Kunitz-type serine protease inhibitor Bi-KTI OS=Bombus ignitus OX=130704 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.122e-11
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = -3

Query:  126 ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 251
             C LSL TG C+ YF R+G+++++GKC  F+YGGC  N NNF
Sbjct:   29 HCTLSLATGTCKGYFPRFGYNIEMGKCVEFIYGGCDGNANNF 70

[Close]

BLAST of SMED30002357 vs. UniProt/SwissProt
Match: sp|Q9BDL1|EPPI_MACMU (Eppin OS=Macaca mulatta OX=9544 GN=EPPIN PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.849e-10
Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = -3

Query:  114 CLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 296
            C+F    + ++ K   C +  ETG C A+F+R+ +D K   C TFV+GGC  N+NNF + A
Sbjct:   61 CVFSCGKKCLDLKQDVCEMPNETGPCLAFFIRWWYDKKNNTCSTFVHGGCQGNNNNFQSEA 121

[Close]

BLAST of SMED30002357 vs. TrEMBL
Match: A0A0R3WBP8 (BPTI/Kunitz inhibitor domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS8078 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.193e-11
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = -3

Query:  117 NSLIIISCLFV-AALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 317
              +I    LFV  A+ L E +   C L +E GLCRAY  R+G+D + G+C  F+YGGC  N N+FH++
Sbjct:   19 TEMIATLALFVLVAISLTEARIDPCKLPIEPGLCRAYMPRWGYDQESGECVRFIYGGCGGNKNHFHSK 86

[Close]

BLAST of SMED30002357 vs. TrEMBL
Match: A0A068Y467 (Trypsin inhibitor OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000419200 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 4.323e-10
Identity = 34/69 (49.28%), Postives = 40/69 (57.97%), Query Frame = -3

Query:  120 IIISCLFVAA---LQLIEGKAP---ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 308
            II    FVA+   L    GK      CNL + +G CR YF+RYG+D K  +CR FVYGGC  N NNF T
Sbjct:   11 IIFFAFFVASMLNLGCCRGKMSYINRCNLPISSGRCRGYFLRYGYDSKTDECRRFVYGGCRGNRNNFFT 79

[Close]

BLAST of SMED30002357 vs. TrEMBL
Match: E0A233 (Kunitz-type protease inhibitor OS=Galleria mellonella OX=7137 GN=KTPI PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.483e-10
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = -3

Query:  120 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 254
            P+C L LETG+CRA   R+G+D KL +C  FVYGGC  N+NNF +
Sbjct:   22 PKCTLPLETGICRAELHRFGYDTKLKECTQFVYGGCHHNENNFKS 66

[Close]

BLAST of SMED30002357 vs. TrEMBL
Match: A0A0R3SS90 (BPTI/Kunitz inhibitor domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS8135 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 5.788e-10
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = -3

Query:  120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248
            CN  ++TG C AYF R+GFD  +G+C  F+YGGC  N NNFH+
Sbjct:    5 CNQPIDTGRCMAYFPRWGFDRSMGRCIPFIYGGCKGNQNNFHS 47

[Close]

BLAST of SMED30002357 vs. TrEMBL
Match: C7SCV7 (Collagen alpha-3(VI) chain OS=Echinococcus granulosus OX=6210 GN=EGR_07243 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 6.485e-10
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = -3

Query:  117 LFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 293
              + A+   E +   C L L+ G CRAYF R+GF  + G+C  F+YGGC  N N FH++
Sbjct:    8 FLLVAISFSEARIDPCKLPLDPGFCRAYFPRWGFHQESGECVRFIYGGCGGNKNQFHSK 66

[Close]

BLAST of SMED30002357 vs. Ensembl Cavefish
Match: col28a2a (collagen alpha-1(XXVIII) chain-like [Source:NCBI gene;Acc:103029985])

HSP 1 Score: 54.6842 bits (130), Expect = 1.266e-9
Identity = 22/47 (46.81%), Postives = 27/47 (57.45%), Query Frame = -3

Query:  114 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 254
            P C+LSL  G CR Y +R+ +D     C  F YGGC  N+N F T A
Sbjct: 1192 PRCSLSLNQGPCREYLIRWYYDKAANSCAQFWYGGCEGNENRFETEA 1238

[Close]

BLAST of SMED30002357 vs. Ensembl Cavefish
Match: wfikkn2b (WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2 [Source:NCBI gene;Acc:103024700])

HSP 1 Score: 53.5286 bits (127), Expect = 2.949e-9
Identity = 26/61 (42.62%), Postives = 36/61 (59.02%), Query Frame = -3

Query:  117 SCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 299
            SCL     +L    A  C+L    G C+AY  R+ + + LG+C+ F+YGGC  N+NNF TR
Sbjct:  361 SCLLSCQGEL----AVPCSLPSLQGPCKAYEPRWAYSITLGQCQPFIYGGCEGNENNFETR 417

[Close]

BLAST of SMED30002357 vs. Ensembl Cavefish
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:103022515])

HSP 1 Score: 52.7582 bits (125), Expect = 5.927e-9
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = -3

Query:  120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248
            C+L  ETG CRA   R+ FD++  KC  F+YGGC  N NNF +
Sbjct:  315 CSLEAETGPCRASMPRWHFDMQQRKCVRFIYGGCAGNRNNFDS 357

[Close]

BLAST of SMED30002357 vs. Ensembl Cavefish
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:103022515])

HSP 1 Score: 52.7582 bits (125), Expect = 5.936e-9
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = -3

Query:  120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248
            C+L  ETG CRA   R+ FD++  KC  F+YGGC  N NNF +
Sbjct:  315 CSLEAETGPCRASMPRWHFDMQQRKCVRFIYGGCAGNRNNFDS 357

[Close]

BLAST of SMED30002357 vs. Ensembl Cavefish
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:103022515])

HSP 1 Score: 52.7582 bits (125), Expect = 5.943e-9
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = -3

Query:  120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248
            C+L  ETG CRA   R+ FD++  KC  F+YGGC  N NNF +
Sbjct:  315 CSLEAETGPCRASMPRWHFDMQQRKCVRFIYGGCAGNRNNFDS 357

[Close]

BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Match: tfpi2 (tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38])

HSP 1 Score: 51.9878 bits (123), Expect = 1.440e-9
Identity = 24/64 (37.50%), Postives = 37/64 (57.81%), Query Frame = -3

Query:  120 ISCLFVAALQLI---EGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 302
            + C++++  Q +   E +   C L  + G CRA F RY F+    +C +F+YGGC  N+NNF T
Sbjct:    6 VQCMYLSESQCVFTLEDQRVTCTLPAKPGDCRAAFPRYFFNRSTLRCESFIYGGCHSNENNFET 69

HSP 2 Score: 48.9062 bits (115), Expect = 1.641e-8
Identity = 24/54 (44.44%), Postives = 30/54 (55.56%), Query Frame = -3

Query:  123 AALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFH 284
            AA   I+     C    ETG CRA+  RY +++ LG C  FVYGGC  N+N F 
Sbjct:   75 AACSFIKKIPKLCRPDAETGRCRAHITRYFYNMTLGMCMPFVYGGCGGNNNRFE 128

[Close]

BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005043.1 (pep scaffold:Pmarinus_7.0:GL481015:31246:35903:1 gene:ENSPMAG00000004579.1 transcript:ENSPMAT00000005043.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 46.595 bits (109), Expect = 1.370e-7
Identity = 25/59 (42.37%), Postives = 31/59 (52.54%), Query Frame = -3

Query:  114 FVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 290
              +   L+  KA  C L +E G+CRA   RY F++  G C  F YGGC  N NNF   A
Sbjct:   62 LASPCPLVAPKA--CRLDMEVGVCRALLRRYFFNMTSGSCEEFGYGGCQGNLNNFKDAA 118

[Close]

BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005038.1 (pep scaffold:Pmarinus_7.0:GL481015:31246:35903:1 gene:ENSPMAG00000004579.1 transcript:ENSPMAT00000005038.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 46.2098 bits (108), Expect = 1.681e-7
Identity = 24/49 (48.98%), Postives = 29/49 (59.18%), Query Frame = -3

Query:  114 APE-CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 257
            AP+ C L +E G+CRA   RY F++  G C  F YGGC  N NNF   A
Sbjct:   71 APKACRLDMEVGVCRALLRRYFFNMTSGSCEEFGYGGCQGNLNNFKDAA 119

[Close]

BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Match: WFIKKN1 (WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30912])

HSP 1 Score: 46.2098 bits (108), Expect = 1.957e-7
Identity = 15/44 (34.09%), Postives = 32/44 (72.73%), Query Frame = -3

Query:  117 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTR 248
            C+L ++ G C+ + +R+ ++  + +C++F+YGGC  N+NNF ++
Sbjct:  374 CSLPVQQGPCKQWALRWAYNPLIKRCQSFIYGGCEGNENNFQSQ 417

[Close]

BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009465.1 (pep scaffold:Pmarinus_7.0:GL478507:22936:25713:-1 gene:ENSPMAG00000008558.1 transcript:ENSPMAT00000009465.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 43.5134 bits (101), Expect = 1.499e-6
Identity = 20/45 (44.44%), Postives = 24/45 (53.33%), Query Frame = -3

Query:  114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248
            C L+  TG CR  F R+ +D     C+ F YGGC  N NNF   A
Sbjct:    1 CLLNPTTGPCRGSFTRWTYDAATSTCKEFTYGGCRGNQNNFLEEA 45

HSP 2 Score: 43.1282 bits (100), Expect = 2.399e-6
Identity = 23/62 (37.10%), Postives = 30/62 (48.39%), Query Frame = -3

Query:  126 LIIISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNF 311
             +I SC     L  ++     C L   T  CR  F R+ +D + G C+ F YGGC  N NNF
Sbjct:  148 FLISSCWMTRRLFHVQ---DVCLLEAVTSPCRGSFTRWTYDAESGHCKEFTYGGCGGNFNNF 206

[Close]

BLAST of SMED30002357 vs. Ensembl Nematostella
Match: EDO41696 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S3T1])

HSP 1 Score: 49.6766 bits (117), Expect = 1.246e-9
Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = -3

Query:  114 ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 251
            EC     TG CRAYF R+ ++    KC+ FVYGGC  N NNF ++A
Sbjct:    1 ECLQPKLTGPCRAYFERWFYNQTSRKCKQFVYGGCQGNSNNFESKA 46

[Close]

BLAST of SMED30002357 vs. Ensembl Nematostella
Match: EDO26263 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S3T1])

HSP 1 Score: 49.6766 bits (117), Expect = 1.246e-9
Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = -3

Query:  114 ECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 251
            EC     TG CRAYF R+ ++    KC+ FVYGGC  N NNF ++A
Sbjct:    1 ECLQPKLTGPCRAYFERWFYNQTSRKCKQFVYGGCQGNSNNFESKA 46

[Close]

BLAST of SMED30002357 vs. Ensembl Nematostella
Match: EDO38466 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCV3])

HSP 1 Score: 49.6766 bits (117), Expect = 1.403e-9
Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = -3

Query:  114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248
            C+L   TG C A F+R+ +D++  +C+ F YGGC  N NNF ++A
Sbjct:   15 CSLPKLTGPCMARFIRWHYDMRSSECKMFTYGGCQGNANNFESKA 59

[Close]

BLAST of SMED30002357 vs. Ensembl Nematostella
Match: EDO26072 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TCY8])

HSP 1 Score: 49.6766 bits (117), Expect = 1.562e-9
Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = -3

Query:  114 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 248
            C+L   TG C A F+R+ +D++  +C+ F YGGC  N NNF ++A
Sbjct:   15 CSLPKLTGPCMARFIRWHYDMRSSECKMFTYGGCQGNANNFESKA 59

[Close]

BLAST of SMED30002357 vs. Ensembl Nematostella
Match: EDO29819 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T2J6])

HSP 1 Score: 48.521 bits (114), Expect = 4.424e-9
Identity = 22/43 (51.16%), Postives = 26/43 (60.47%), Query Frame = -3

Query:  120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248
            C L  + G CRA   R  F+ + GKC  F+YGGC  N NNFHT
Sbjct:   14 CTLPKKVGDCRAAMPRVFFNSQSGKCEDFIYGGCGGNANNFHT 56

[Close]

BLAST of SMED30002357 vs. Ensembl Medaka
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:101168561])

HSP 1 Score: 52.7582 bits (125), Expect = 6.180e-9
Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = -3

Query:  120 QLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 275
            +++E     C L  ETG CRA   R+ FD+   KC  F+YGGC  N NNF +
Sbjct:  305 KIVEEVKAVCTLEAETGPCRASMPRWHFDLSQRKCVRFIYGGCAGNRNNFDS 356

[Close]

BLAST of SMED30002357 vs. Ensembl Medaka
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:101168561])

HSP 1 Score: 52.7582 bits (125), Expect = 6.189e-9
Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = -3

Query:  120 QLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 275
            +++E     C L  ETG CRA   R+ FD+   KC  F+YGGC  N NNF +
Sbjct:  305 KIVEEVKAVCTLEAETGPCRASMPRWHFDLSQRKCVRFIYGGCAGNRNNFDS 356

[Close]

BLAST of SMED30002357 vs. Ensembl Medaka
Match: aplp2 (amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:101168561])

HSP 1 Score: 52.7582 bits (125), Expect = 6.196e-9
Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = -3

Query:  120 QLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 275
            +++E     C L  ETG CRA   R+ FD+   KC  F+YGGC  N NNF +
Sbjct:  305 KIVEEVKAVCTLEAETGPCRASMPRWHFDLSQRKCVRFIYGGCAGNRNNFDS 356

[Close]

BLAST of SMED30002357 vs. Ensembl Medaka
Match: col28a2a (collagen alpha-1(XXVIII) chain [Source:NCBI gene;Acc:101157899])

HSP 1 Score: 52.373 bits (124), Expect = 9.130e-9
Identity = 19/47 (40.43%), Postives = 29/47 (61.70%), Query Frame = -3

Query:  114 PECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 254
            P C+++L+ G CR Y +R+ +D +   C  F YGGC  N+N F T +
Sbjct:  968 PRCSITLDQGTCRDYVIRWYYDQQANACAQFWYGGCGGNENRFETES 1014

[Close]

BLAST of SMED30002357 vs. Ensembl Medaka
Match: ENSORLT00000040309.1 (pep primary_assembly:ASM223467v1:11:20946373:20947959:-1 gene:ENSORLG00000024141.1 transcript:ENSORLT00000040309.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 46.2098 bits (108), Expect = 7.403e-8
Identity = 21/43 (48.84%), Postives = 25/43 (58.14%), Query Frame = -3

Query:  120 CNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 248
            C+  L+ G CR Y VR+ FD +   C  F YGGC  N NNF T
Sbjct:    8 CSQPLDPGPCRLYRVRWYFDPQANSCAQFWYGGCHGNQNNFET 50

[Close]

BLAST of SMED30002357 vs. Planmine SMEST
Match: SMESG000038055.1 (SMESG000038055.1)

HSP 1 Score: 140.198 bits (352), Expect = 8.445e-45
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = -3

Query:  114 NSLIIISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 317
            NSLIIISCLFV ALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA
Sbjct:    2 NSLIIISCLFVTALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 69

[Close]

BLAST of SMED30002357 vs. Planmine SMEST
Match: SMESG000038052.1 (SMESG000038052.1)

HSP 1 Score: 124.79 bits (312), Expect = 9.654e-39
Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = -3

Query:  114 NSLIIISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 317
            NSL+I SC+FVA LQL E K+PECNL LETGLC AYFVRYGFDVKLGKCRTFVYGGC VNDNNFHTRA
Sbjct:    2 NSLVIFSCIFVAVLQLTESKSPECNLPLETGLCEAYFVRYGFDVKLGKCRTFVYGGCHVNDNNFHTRA 69

[Close]

BLAST of SMED30002357 vs. Planmine SMEST
Match: SMESG000038005.1 (SMESG000038005.1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.779e-23
Identity = 42/64 (65.62%), Postives = 45/64 (70.31%), Query Frame = -3

Query:  114 IISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 305
            II  LFV  L  IE K PECN  LE GLCR Y VRYG+ V+ G+C TF YGGCP NDNNF TRA
Sbjct:    4 IIFLLFVTILSCIECKEPECNQPLEIGLCRQYRVRYGYSVERGRCVTFTYGGCPYNDNNFFTRA 67

[Close]

BLAST of SMED30002357 vs. Planmine SMEST
Match: SMESG000037991.1 (SMESG000037991.1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.961e-22
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = -3

Query:  114 ALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHTRA 281
                 E +APECN ++ETGLC AYF+RYGFD KLG+C  F+YGGCPVN NNF T+ 
Sbjct:   14 TFNFSESRAPECNDTIETGLCDAYFIRYGFDTKLGECIQFIYGGCPVNKNNFKTKE 69

[Close]

BLAST of SMED30002357 vs. Planmine SMEST
Match: SMESG000037994.1 (SMESG000037994.1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.072e-18
Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = -3

Query:  120 NSLIIISCLFVAALQLIEGKAPECNLSLETGLCRAYFVRYGFDVKLGKCRTFVYGGCPVNDNNFHT 317
            NS++I + +F     L E +APECN   +TG+C AYF R+ F+++ G C +F+YGGC  N NNF+T
Sbjct:    2 NSIVIFTLIFCVIFSLGESRAPECNEPKKTGMCAAYFPRFYFNIQSGNCESFIYGGCQANGNNFNT 67

The following BLAST results are available for this feature:

BLAST of SMED30002357 vs. Ensembl Human
BLAST of SMED30002357 vs. Ensembl Celegans
BLAST of SMED30002357 vs. Ensembl Fly
BLAST of SMED30002357 vs. Ensembl Zebrafish
BLAST of SMED30002357 vs. Ensembl Xenopus
BLAST of SMED30002357 vs. Ensembl Mouse
BLAST of SMED30002357 vs. UniProt/SwissProt
BLAST of SMED30002357 vs. TrEMBL
BLAST of SMED30002357 vs. Ensembl Cavefish
BLAST of SMED30002357 vs. Ensembl Sea Lamprey
BLAST of SMED30002357 vs. Ensembl Yeast
BLAST of SMED30002357 vs. Ensembl Nematostella
BLAST of SMED30002357 vs. Ensembl Medaka
BLAST of SMED30002357 vs. Planmine SMEST

BLAST of SMED30002357 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
EPPIN	6.284e-11	40.98	epididymal peptidase inhibitor [Source:HGNC Symbol...	[more]
EPPIN	9.110e-11	40.98	epididymal peptidase inhibitor [Source:HGNC Symbol...	[more]
EPPIN-WFDC6	2.095e-10	40.98	EPPIN-WFDC6 readthrough [Source:HGNC Symbol;Acc:HG...	[more]
EPPIN-WFDC6	2.405e-10	40.98	EPPIN-WFDC6 readthrough [Source:HGNC Symbol;Acc:HG...	[more]
WFIKKN2	9.629e-9	40.74	WAP, follistatin/kazal, immunoglobulin, kunitz and...	[more]

BLAST of SMED30002357 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
mlt-11	1.344e-8	44.90	pep chromosome:WBcel235:V:20667211:20678513:1 gene...	[more]
mlt-11	1.357e-8	44.90	pep chromosome:WBcel235:V:20667211:20678513:1 gene...	[more]
mlt-11	1.615e-8	44.90	pep chromosome:WBcel235:V:20667209:20678513:1 gene...	[more]
mlt-11	2.722e-8	46.51	pep chromosome:WBcel235:V:20667211:20678513:1 gene...	[more]
mlt-11	2.856e-8	46.51	pep chromosome:WBcel235:V:20667209:20678513:1 gene...	[more]

BLAST of SMED30002357 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
CG3604	8.420e-9	46.67	gene:FBgn0031562 transcript:FBtr0077545	[more]
CG3604	8.420e-9	46.67	gene:FBgn0031562 transcript:FBtr0346581	[more]
Ppn	3.182e-8	51.11	gene:FBgn0003137 transcript:FBtr0300337	[more]
Ppn	3.776e-8	51.11	gene:FBgn0003137 transcript:FBtr0301839	[more]
Ppn	3.812e-8	51.11	gene:FBgn0003137 transcript:FBtr0301838	[more]

BLAST of SMED30002357 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
col28a2a	4.469e-9	46.67	collagen, type XXVIII, alpha 2a [Source:ZFIN;Acc:Z...	[more]
col28a2a	4.472e-9	46.67	collagen, type XXVIII, alpha 2a [Source:ZFIN;Acc:Z...	[more]
aplp2	7.000e-9	51.16	amyloid beta (A4) precursor-like protein 2 [Source...	[more]
aplp2	7.008e-9	51.16	amyloid beta (A4) precursor-like protein 2 [Source...	[more]
wfikkn2b	1.730e-8	40.43	WAP, follistatin/kazal, immunoglobulin, kunitz and...	[more]

BLAST of SMED30002357 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
WFIKKN2	2.323e-9	40.74	WAP, follistatin/kazal, immunoglobulin, kunitz and...	[more]
cmtr2	4.851e-8	45.45	cap methyltransferase 2 [Source:Xenbase;Acc:XB-GEN...	[more]
cmtr2	8.406e-8	45.45	cap methyltransferase 2 [Source:Xenbase;Acc:XB-GEN...	[more]
rlbp1	1.317e-7	52.50	retinaldehyde binding protein 1 [Source:Xenbase;Ac...	[more]
rlbp1	1.355e-7	52.50	retinaldehyde binding protein 1 [Source:Xenbase;Ac...	[more]

BLAST of SMED30002357 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Spint3	4.493e-10	50.00	serine peptidase inhibitor, Kunitz type, 3 [Source...	[more]
Eppin	5.417e-9	34.43	epididymal peptidase inhibitor [Source:MGI Symbol;...	[more]
App	3.292e-8	60.53	amyloid beta (A4) precursor protein [Source:MGI Sy...	[more]
App	3.363e-8	60.53	amyloid beta (A4) precursor protein [Source:MGI Sy...	[more]
App	3.369e-8	60.53	amyloid beta (A4) precursor protein [Source:MGI Sy...	[more]

BLAST of SMED30002357 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P81906\|ISPI2_GALME	9.487e-13	60.47	Inducible serine protease inhibitor 2 (Fragment) O...	[more]
sp\|P0DJ50\|VKT31_MESMA	1.774e-12	36.76	Kunitz-type serine protease inhibitor BmKTT-2 OS=M...	[more]
sp\|D8KY58\|VKT_BOMTE	3.044e-11	47.17	Kunitz-type serine protease inhibitor Bt-KTI OS=Bo...	[more]
sp\|G3LH89\|VKT_BOMIG	4.122e-11	54.76	Kunitz-type serine protease inhibitor Bi-KTI OS=Bo...	[more]
sp\|Q9BDL1\|EPPI_MACMU	3.849e-10	40.98	Eppin OS=Macaca mulatta OX=9544 GN=EPPIN PE=2 SV=1	[more]

BLAST of SMED30002357 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0R3WBP8	1.193e-11	44.12	BPTI/Kunitz inhibitor domain-containing protein OS...	[more]
A0A068Y467	4.323e-10	49.28	Trypsin inhibitor OS=Echinococcus multilocularis O...	[more]
E0A233	4.483e-10	57.78	Kunitz-type protease inhibitor OS=Galleria mellone...	[more]
A0A0R3SS90	5.788e-10	55.81	BPTI/Kunitz inhibitor domain-containing protein OS...	[more]
C7SCV7	6.485e-10	42.37	Collagen alpha-3(VI) chain OS=Echinococcus granulo...	[more]

BLAST of SMED30002357 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
col28a2a	1.266e-9	46.81	collagen alpha-1(XXVIII) chain-like [Source:NCBI g...	[more]
wfikkn2b	2.949e-9	42.62	WAP, Kazal, immunoglobulin, Kunitz and NTR domain-...	[more]
aplp2	5.927e-9	51.16	amyloid beta precursor like protein 2 [Source:NCBI...	[more]
aplp2	5.936e-9	51.16	amyloid beta precursor like protein 2 [Source:NCBI...	[more]
aplp2	5.943e-9	51.16	amyloid beta precursor like protein 2 [Source:NCBI...	[more]

BLAST of SMED30002357 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
tfpi2	1.440e-9	37.50	tissue factor pathway inhibitor 2 [Source:ZFIN;Acc...	[more]
ENSPMAT00000005043.1	1.370e-7	42.37	pep scaffold:Pmarinus_7.0:GL481015:31246:35903:1 g...	[more]
ENSPMAT00000005038.1	1.681e-7	48.98	pep scaffold:Pmarinus_7.0:GL481015:31246:35903:1 g...	[more]
WFIKKN1	1.957e-7	34.09	WAP, follistatin/kazal, immunoglobulin, kunitz and...	[more]
ENSPMAT00000009465.1	1.499e-6	44.44	pep scaffold:Pmarinus_7.0:GL478507:22936:25713:-1 ...	[more]

BLAST of SMED30002357 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of SMED30002357 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO41696	1.246e-9	50.00	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO26263	1.246e-9	50.00	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO38466	1.403e-9	44.44	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO26072	1.562e-9	44.44	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO29819	4.424e-9	51.16	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of SMED30002357 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
aplp2	6.180e-9	44.23	amyloid beta precursor like protein 2 [Source:NCBI...	[more]
aplp2	6.189e-9	44.23	amyloid beta precursor like protein 2 [Source:NCBI...	[more]
aplp2	6.196e-9	44.23	amyloid beta precursor like protein 2 [Source:NCBI...	[more]
col28a2a	9.130e-9	40.43	collagen alpha-1(XXVIII) chain [Source:NCBI gene;A...	[more]
ENSORLT00000040309.1	7.403e-8	48.84	pep primary_assembly:ASM223467v1:11:20946373:20947...	[more]

BLAST of SMED30002357 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000038055.1	8.445e-45	98.53	SMESG000038055.1	[more]
SMESG000038052.1	9.654e-39	85.29	SMESG000038052.1	[more]
SMESG000038005.1	1.779e-23	65.63	SMESG000038005.1	[more]
SMESG000037991.1	1.961e-22	62.50	SMESG000037991.1	[more]
SMESG000037994.1	2.072e-18	46.97	SMESG000037994.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence

transcript sequence

>SMED30002357 ID=SMED30002357|Name=SMED30002357|organism=Schmidtea mediterranea sexual|type=transcript|length=334bp
TTTTNTTTTTTTTNTTTTTTTTTTTATTAAAACACCGTAATAATATATTT
CAATCAAAACTGAATCAAAAACTTAATCTTTTTTATTTATTTTTCGCAAC
GTTCTTCACACTCAGCTCTCGTGTGAAAGTTATTGTCATTTACAGGGCAT
CCTCCATAAACAAAAGTTCTGCATTTCCCCAATTTCACATCAAAACCATA
TCTAACAAAATAAGCTCGACATAATCCTGTTTCTAGAGACAAATTGCATT
CTGGAGCTTTGCCTTCAATGAGTTGAAGAGCTGCAACAAATAAACAAGAA
ATAATAATGAGAGAATTCTATTTTTTTTTTTTTT

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000067	goblet cell
PLANA:0000421	tail
PLANA:0002075	pigment cell

Vocabulary: **INTERPRO**
Term	Definition
IPR002223	Kunitz_BPTI
IPR020901	Prtase_inh_Kunz-CS

Vocabulary: **molecular function**
Term	Definition
GO:0004867	serine-type endopeptidase inhibitor activity

Main menu

SMED30002357

Zeng et. al., 2018

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 12

Owlery

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