GATA456-2

Overview


Name	GATA456-2
Smed ID	SMED30002349
Length (bp)	1336

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of GATA456-2 (SMED30002349) t-SNE clustered cells

Violin plots show distribution of expression levels for GATA456-2 (SMED30002349) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of GATA456-2 (SMED30002349) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for GATA456-2 (SMED30002349) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30002349

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 8

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
cephalic ganglia	SMED30002349	SMESG000022702.1	dd_Smed_v4_9910_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30002349	SMESG000022702.1	dd_Smed_v4_9910_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30002349	SMESG000022702.1	dd_Smed_v4_9910_0_1	dd_Smed_v4	PMID:30471994 Scimone et al., 2018
dorsal-ventral muscle cell	SMED30002349	SMESG000022702.1	dd_Smed_v4_9910_0_1	dd_Smed_v4	PMID:30471994 Scimone et al., 2018
dorsal-ventral muscle cell	SMED30002349	SMESG000022702.1	dd_Smed_v4_9910_0_1	dd_Smed_v4	PMID:30471994 Scimone et al., 2018
medial-lateral axis of the whole animal	SMED30002349	SMESG000022702.1	dd_Smed_v4_9910_0_1	dd_Smed_v4	PMID:30471994 Scimone et al., 2018
gut	SMED30002349	SMESG000022702.1	KX827244	smed_ncbi_20200123	PMID:28287248 González-Sastre et al., 2017
parenchyma	SMED30002349	SMESG000022702.1	KX827244	smed_ncbi_20200123	PMID:28287248 González-Sastre et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of GATA456-2 vs. Ensembl Human
Match: GATA4 (GATA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:4173])

HSP 1 Score: 96.6709 bits (239), Expect = 3.056e-22
Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  MRKE +Q+
Sbjct:    6 SEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQT 111

[Close]

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  MRKE +Q+
Sbjct:    6 SEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQT 111

[Close]

BLAST of GATA456-2 vs. Ensembl Human
Match: GATA4 (GATA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:4173])

HSP 1 Score: 93.9745 bits (232), Expect = 5.429e-22
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  MRKE +Q+
Sbjct:    8 GRECVNCGAMSTPLWRRDGTGHYLCNACGL-------------YHKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQT 111

[Close]

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  MRKE +Q+
Sbjct:    8 GRECVNCGAMSTPLWRRDGTGHYLCNACGL-------------YHKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQT 111

[Close]

BLAST of GATA456-2 vs. Ensembl Human
Match: GATA4 (GATA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:4173])

HSP 1 Score: 98.9821 bits (245), Expect = 7.886e-22
Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  MRKE +Q+
Sbjct:  213 SEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQT 318

[Close]

BLAST of GATA456-2 vs. Ensembl Celegans
Match: elt-1 (Transcription factor elt-1 [Source:UniProtKB/Swiss-Prot;Acc:P28515])

HSP 1 Score: 107.457 bits (267), Expect = 2.860e-25
Identity = 50/112 (44.64%), Postives = 69/112 (61.61%), Query Frame = 2

Query:  650 KECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +ECV CG+ N   + +DG+GN+ C  C          L    ++    + K   R+   KRTG++C NC+T  TTLWRRN EG PVCNACGLY++LHK  RP TM+K+ +Q+
Sbjct:  215 RECVNCGVHNTPLWRRDGSGNYLCNAC---------GLYFKMNHHARPLVKPKKRQNAQKRTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERPITMKKDGIQT 317

[Close]

BLAST of GATA456-2 vs. Ensembl Celegans
Match: elt-1 (Transcription factor elt-1 [Source:UniProtKB/Swiss-Prot;Acc:P28515])

HSP 1 Score: 107.842 bits (268), Expect = 4.116e-25
Identity = 50/112 (44.64%), Postives = 69/112 (61.61%), Query Frame = 2

Query:  650 KECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +ECV CG+ N   + +DG+GN+ C  C          L    ++    + K   R+   KRTG++C NC+T  TTLWRRN EG PVCNACGLY++LHK  RP TM+K+ +Q+
Sbjct:  287 RECVNCGVHNTPLWRRDGSGNYLCNAC---------GLYFKMNHHARPLVKPKKRQNAQKRTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERPITMKKDGIQT 389

[Close]

BLAST of GATA456-2 vs. Ensembl Celegans
Match: elt-1 (Transcription factor elt-1 [Source:UniProtKB/Swiss-Prot;Acc:P28515])

HSP 1 Score: 107.071 bits (266), Expect = 4.162e-25
Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 2

Query:  650 KECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTA-KRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +ECV CG+ N   + +DG+GN+ C  C          L    ++    + K   R+Q A KRTG++C NC+T  TTLWRRN EG PVCNACGLY++LHK  RP TM+K+ +Q+
Sbjct:  215 RECVNCGVHNTPLWRRDGSGNYLCNAC---------GLYFKMNHHARPLVKPKKRQQNAQKRTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERPITMKKDGIQT 318

[Close]

BLAST of GATA456-2 vs. Ensembl Celegans
Match: elt-1 (Transcription factor elt-1 [Source:UniProtKB/Swiss-Prot;Acc:P28515])

HSP 1 Score: 107.071 bits (266), Expect = 6.171e-25
Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 2

Query:  650 KECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTA-KRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +ECV CG+ N   + +DG+GN+ C  C          L    ++    + K   R+Q A KRTG++C NC+T  TTLWRRN EG PVCNACGLY++LHK  RP TM+K+ +Q+
Sbjct:  286 RECVNCGVHNTPLWRRDGSGNYLCNAC---------GLYFKMNHHARPLVKPKKRQQNAQKRTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERPITMKKDGIQT 389

[Close]

BLAST of GATA456-2 vs. Ensembl Celegans
Match: elt-1 (Transcription factor elt-1 [Source:UniProtKB/Swiss-Prot;Acc:P28515])

HSP 1 Score: 107.071 bits (266), Expect = 6.213e-25
Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 2

Query:  650 KECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTA-KRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +ECV CG+ N   + +DG+GN+ C  C          L    ++    + K   R+Q A KRTG++C NC+T  TTLWRRN EG PVCNACGLY++LHK  RP TM+K+ +Q+
Sbjct:  287 RECVNCGVHNTPLWRRDGSGNYLCNAC---------GLYFKMNHHARPLVKPKKRQQNAQKRTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERPITMKKDGIQT 390

[Close]

BLAST of GATA456-2 vs. Ensembl Fly
Match: grn (gene:FBgn0001138 transcript:FBtr0081808)

HSP 1 Score: 100.523 bits (249), Expect = 1.371e-22
Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C         +  LI   ++  +    + +  AKR G  C+NCKT  TTLWRRN+ G+PVCNACGLYY+LH  +RP TM+KE +Q+
Sbjct:  258 GRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQ---SLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQT 367

HSP 2 Score: 53.1434 bits (126), Expect = 3.183e-7
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 2

Query:  827 KRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRP--PTMRKEILQS 985
            +  G +C NC   +T LWRR+  G  +CNACGLYY+++  +RP     R+  LQS
Sbjct:  255 REEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQS 309

[Close]

BLAST of GATA456-2 vs. Ensembl Fly
Match: grn (gene:FBgn0001138 transcript:FBtr0330188)

HSP 1 Score: 100.908 bits (250), Expect = 1.739e-22
Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C         +  LI   ++  +    + +  AKR G  C+NCKT  TTLWRRN+ G+PVCNACGLYY+LH  +RP TM+KE +Q+
Sbjct:  471 GRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQ---SLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQT 580

[Close]

BLAST of GATA456-2 vs. Ensembl Fly
Match: grn (gene:FBgn0001138 transcript:FBtr0300040)

HSP 1 Score: 100.908 bits (250), Expect = 1.875e-22
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCV-------RKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C        +  P + P   L     +S           AKR G  C+NCKT  TTLWRRN+ G+PVCNACGLYY+LH  +RP TM+KE +Q+
Sbjct:  471 GRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQS----------AAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQT 580

[Close]

BLAST of GATA456-2 vs. Ensembl Fly
Match: pnr (gene:FBgn0003117 transcript:FBtr0083221)

HSP 1 Score: 97.4413 bits (241), Expect = 1.714e-21
Identity = 48/122 (39.34%), Postives = 65/122 (53.28%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCV-------RKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
               +ECV CG  +   + +DG G++ C  C           P + PS             K L      +R GL C+NC T  TTLWRRN++G+PVCNACGLYY+LH  +RP  MRK+ +Q+
Sbjct:  164 GEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPS-------------KRLVSATATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQT 272

[Close]

BLAST of GATA456-2 vs. Ensembl Fly
Match: pnr (gene:FBgn0003117 transcript:FBtr0335427)

HSP 1 Score: 97.0561 bits (240), Expect = 1.836e-21
Identity = 48/122 (39.34%), Postives = 65/122 (53.28%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCV-------RKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
               +ECV CG  +   + +DG G++ C  C           P + PS             K L      +R GL C+NC T  TTLWRRN++G+PVCNACGLYY+LH  +RP  MRK+ +Q+
Sbjct:  112 GEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPS-------------KRLVSATATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQT 220

[Close]

BLAST of GATA456-2 vs. Ensembl Zebrafish
Match: gata1b (GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43])

HSP 1 Score: 96.6709 bits (239), Expect = 2.237e-22
Identity = 49/113 (43.36%), Postives = 66/113 (58.41%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            A+ECV CG      + +DG G++ C  C   +     +  LI   K         R   +KR G QC+NC+T  TTLWRRNS G+PVCNACGLY++LH  +RP  M+KE +Q+
Sbjct:   77 ARECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIRPKK---------RPVVSKRIGTQCANCQTSTTTLWRRNSSGEPVCNACGLYFKLHNVNRPLAMKKEGIQT 180

[Close]

BLAST of GATA456-2 vs. Ensembl Zebrafish
Match: gata6 (GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1])

HSP 1 Score: 99.3673 bits (246), Expect = 2.528e-22
Identity = 49/113 (43.36%), Postives = 67/113 (59.29%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            ++ECV CG  +   + +DG G+F C  C   +     S  LI         K   R  +++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  M+KE +Q+
Sbjct:  199 SRECVNCGSMSTPLWRRDGTGHFLCNACGLYSKMNGLSRPLI---------KPQKRMSSSRRIGLSCANCQTSTTTLWRRNAEGEPVCNACGLYTKLHGVPRPLAMKKEGIQT 302

[Close]

BLAST of GATA456-2 vs. Ensembl Zebrafish
Match: gata1a (GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268])

HSP 1 Score: 98.9821 bits (245), Expect = 3.420e-22
Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCV-------RKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            A+ECV CG      + +DG G++ C  C        +  P + P   LI                 +KR G QC+NC T  TTLWRRN+ G+PVCNACGLY++LH  +RP TM+K+ +Q+
Sbjct:  235 ARECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIRPKKRLI----------------VSKRAGTQCANCHTSTTTLWRRNASGEPVCNACGLYFKLHNVNRPLTMKKDGIQT 338

[Close]

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCV-------RKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            A+ECV CG      + +DG G++ C  C        +  P + P   LI                 +KR G QC+NC T  TTLWRRN+ G+PVCNACGLY++LH  +RP TM+K+ +Q+
Sbjct:  235 ARECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIRPKKRLI----------------VSKRAGTQCANCHTSTTTLWRRNASGEPVCNACGLYFKLHNVNRPLTMKKDGIQT 338

[Close]

BLAST of GATA456-2 vs. Ensembl Zebrafish
Match: gata1b (GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43])

HSP 1 Score: 98.2117 bits (243), Expect = 3.745e-22
Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            A+ECV CG      + +DG G++ C  C                +K +  N+ L R +     +KR G QC+NC+T  TTLWRRNS G+PVCNACGLY++LH  +RP  M+KE +Q+
Sbjct:  195 ARECVNCGATATPLWRRDGTGHYLCNACGLY-------------HKMNGQNRPLIRPKKRPVVSKRIGTQCANCQTSTTTLWRRNSSGEPVCNACGLYFKLHNVNRPLAMKKEGIQT 298

[Close]

BLAST of GATA456-2 vs. Ensembl Xenopus
Match: gata3 (GATA binding protein 3 [Source:NCBI gene;Acc:448391])

HSP 1 Score: 98.2117 bits (243), Expect = 1.303e-21
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C   +     +  LI         K   R   A+R G  C+NC+T  TTLWRRN+ G PVCNACGLYY+LH  +RP TM+KE +Q+
Sbjct:  254 GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLI---------KPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQT 357

HSP 2 Score: 51.6026 bits (122), Expect = 1.704e-6
Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 2

Query:  815 KQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            K  +   G +C NC   +T LWRR+  G  +CNACGLY++++  +RP    K  L +
Sbjct:  247 KTRSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSA 303

[Close]

BLAST of GATA456-2 vs. Ensembl Xenopus
Match: gata3 (GATA binding protein 3 [Source:NCBI gene;Acc:448391])

HSP 1 Score: 98.2117 bits (243), Expect = 1.432e-21
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C   +     +  LI         K   R   A+R G  C+NC+T  TTLWRRN+ G PVCNACGLYY+LH  +RP TM+KE +Q+
Sbjct:  254 GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLI---------KPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQT 357

HSP 2 Score: 51.6026 bits (122), Expect = 1.691e-6
Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 2

Query:  815 KQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            K  +   G +C NC   +T LWRR+  G  +CNACGLY++++  +RP    K  L +
Sbjct:  247 KTRSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSA 303

[Close]

BLAST of GATA456-2 vs. Ensembl Xenopus
Match: gata5 (GATA binding protein 5 [Source:NCBI gene;Acc:496852])

HSP 1 Score: 96.2857 bits (238), Expect = 2.875e-21
Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
               +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q    +++R GL C+NC T  TTLWRRNSEG+PVCNACGLY +LH   RP  M+KE +Q+
Sbjct:  179 GEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQKRLSSSRRAGLCCTNCHTSTTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQT 284

[Close]

BLAST of GATA456-2 vs. Ensembl Xenopus
Match: mcm4 (minichromosome maintenance complex component 4 [Source:Xenbase;Acc:XB-GENE-1011481])

HSP 1 Score: 96.2857 bits (238), Expect = 3.379e-21
Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC T  TTLWRRN+EG+PVCNACGLY +LH   RP  M+KE +Q+
Sbjct:  181 SEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQRRLSASRRVGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQT 286

[Close]

BLAST of GATA456-2 vs. Ensembl Xenopus
Match: gata5 (GATA binding protein 5 [Source:NCBI gene;Acc:496852])

HSP 1 Score: 96.2857 bits (238), Expect = 3.534e-21
Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
               +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q    +++R GL C+NC T  TTLWRRNSEG+PVCNACGLY +LH   RP  M+KE +Q+
Sbjct:  179 GEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQKRLSSSRRAGLCCTNCHTSTTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQT 284

[Close]

BLAST of GATA456-2 vs. Ensembl Mouse
Match: Gata5 (GATA binding protein 5 [Source:MGI Symbol;Acc:MGI:109497])

HSP 1 Score: 99.7525 bits (247), Expect = 2.304e-22
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
               +ECV CG  +   + +DG G++ C  C                +K + +N+ L R Q    +++R+GL CSNC T  TTLWRRNSEG+PVCNACGLY +LH   RP  M+KE +Q+
Sbjct:  191 GEGRECVNCGALSTPLWRRDGTGHYLCNACGLY-------------HKMNGVNRPLVRPQKRLSSSRRSGLCCSNCHTATTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQT 296

[Close]

BLAST of GATA456-2 vs. Ensembl Mouse
Match: Gata4 (GATA binding protein 4 [Source:MGI Symbol;Acc:MGI:95664])

HSP 1 Score: 95.9005 bits (237), Expect = 3.433e-22
Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  MRKE +Q+
Sbjct:    6 SEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQT 111

[Close]

BLAST of GATA456-2 vs. Ensembl Mouse
Match: Gata4 (GATA binding protein 4 [Source:MGI Symbol;Acc:MGI:95664])

HSP 1 Score: 98.5969 bits (244), Expect = 6.727e-22
Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  MRKE +Q+
Sbjct:  212 SEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQT 317

HSP 2 Score: 51.9878 bits (123), Expect = 9.737e-7
Identity = 25/72 (34.72%), Postives = 37/72 (51.39%), Query Frame = 2

Query:  740 NPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRP 955
             P  +P L  +P       + NL         G +C NC   +T LWRR+  G  +CNACGLY++++  +RP
Sbjct:  182 GPFDSPVLHSLPGRANPGRHPNLVDMFDDFSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRP 253

[Close]

BLAST of GATA456-2 vs. Ensembl Mouse
Match: Gata4 (GATA binding protein 4 [Source:MGI Symbol;Acc:MGI:95664])

HSP 1 Score: 98.5969 bits (244), Expect = 6.931e-22
Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  MRKE +Q+
Sbjct:  211 SEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQT 316

[Close]

BLAST of GATA456-2 vs. Ensembl Mouse
Match: Gata3 (GATA binding protein 3 [Source:MGI Symbol;Acc:MGI:95663])

HSP 1 Score: 97.8265 bits (242), Expect = 1.316e-21
Identity = 48/115 (41.74%), Postives = 65/115 (56.52%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
               +ECV CG  +   + +DG G++ C  C   +     +  LI         K   R   A+R G  C+NC+T  TTLWRRN+ G PVCNACGLYY+LH  +RP TM+KE +Q+
Sbjct:  258 TEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLI---------KPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQT 363

HSP 2 Score: 51.2174 bits (121), Expect = 1.527e-6
Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 2

Query:  815 KQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            K  +   G +C NC   +T LWRR+  G  +CNACGLY++++  +RP    K  L +
Sbjct:  253 KARSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSA 309

[Close]

BLAST of GATA456-2 vs. UniProt/SwissProt
Match: sp|P28515|ELT1_CAEEL (Transcription factor elt-1 OS=Caenorhabditis elegans OX=6239 GN=elt-1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.295e-24
Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 2

Query:  650 KECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTA-KRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +ECV CG+ N   + +DG+GN+ C  C          L    ++    + K   R+Q A KRTG++C NC+T  TTLWRRN EG PVCNACGLY++LHK  RP TM+K+ +Q+
Sbjct:  215 RECVNCGVHNTPLWRRDGSGNYLCNAC---------GLYFKMNHHARPLVKPKKRQQNAQKRTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERPITMKKDGIQT 318

[Close]

BLAST of GATA456-2 vs. UniProt/SwissProt
Match: sp|P91623|GATAC_DROME (GATA-binding factor C OS=Drosophila melanogaster OX=7227 GN=grn PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.374e-21
Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C         +  LI   ++  +    + +  AKR G  C+NCKT  TTLWRRN+ G+PVCNACGLYY+LH  +RP TM+KE +Q+
Sbjct:  258 GRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQ---SLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQT 367

HSP 2 Score: 53.1434 bits (126), Expect = 3.190e-6
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 2

Query:  827 KRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRP--PTMRKEILQS 985
            +  G +C NC   +T LWRR+  G  +CNACGLYY+++  +RP     R+  LQS
Sbjct:  255 REEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQS 309

[Close]

BLAST of GATA456-2 vs. UniProt/SwissProt
Match: sp|P97489|GATA5_MOUSE (Transcription factor GATA-5 OS=Mus musculus OX=10090 GN=Gata5 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.611e-21
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
               +ECV CG  +   + +DG G++ C  C                +K + +N+ L R Q    +++R+GL CSNC T  TTLWRRNSEG+PVCNACGLY +LH   RP  M+KE +Q+
Sbjct:  191 GEGRECVNCGALSTPLWRRDGTGHYLCNACGLY-------------HKMNGVNRPLVRPQKRLSSSRRSGLCCSNCHTATTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQT 296

[Close]

BLAST of GATA456-2 vs. UniProt/SwissProt
Match: sp|P43694|GATA4_HUMAN (Transcription factor GATA-4 OS=Homo sapiens OX=9606 GN=GATA4 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.902e-21
Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  MRKE +Q+
Sbjct:  212 SEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQT 317

[Close]

BLAST of GATA456-2 vs. UniProt/SwissProt
Match: sp|P46152|GATA4_RAT (Transcription factor GATA-4 OS=Rattus norvegicus OX=10116 GN=Gata4 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.507e-21
Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     ++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  MRKE +Q+
Sbjct:  211 SEGRECVNCGAMSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQT 316

[Close]

BLAST of GATA456-2 vs. TrEMBL
Match: A0A1L6KW39 (GATA456-2 OS=Schmidtea mediterranea OX=79327 GN=gata456-2 PE=2 SV=1)

HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0
Identity = 359/370 (97.03%), Postives = 360/370 (97.30%), Query Frame = 2

Query:  134 MHQQQSPDSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLIN-NYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSMMAXXXXXXXXXXXXXXXXXNRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSXXXXXXXXXXXXXXYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ 1240
            MHQQQSPDSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLIN +YHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSMMASEYSKSD   S      NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTMCMKYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ
Sbjct:    1 MHQQQSPDSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLINIDYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSMMASEYSKSDVNSS------NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTMCMKYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ 364

[Close]

BLAST of GATA456-2 vs. TrEMBL
Match: F1CDE5 (GATA456b OS=Schmidtea polychroa OX=50054 PE=2 SV=1)

HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0
Identity = 334/370 (90.27%), Postives = 344/370 (92.97%), Query Frame = 2

Query:  134 MHQQQSPDSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLINNYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSMMAXXXXXXXXXXXXXXXXXNRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSXXXXXXXXXXXXXXYMDQEFPIKSETQIMSSPFTNGHCI-PTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ 1240
            MHQQQSPDSQNPQHPQHLPYLRSYENLGLRNCSYDMN+C+GVRYPF YPS Q S QD+ D KVP NLINNYHLLNSMWPNH+DS+SR+QMQYP MQY SQCNYNPLQPSVP HYSIP ENQMFIEQVKTMV DQAHLQNCQKMNFSDYSM+ASEYSKSD   S      NRAKECVICGMENGDTYHQDGN NFHCLNCVRKNPCVNPSLDLIPSYKK+QMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTM MKYMDQEFPIKSETQ+MSSPFTNGHCI  TTDKYDS+FRHH FELTQPPSNINDMVQHPITNISHHGPFDYIPQ
Sbjct:    1 MHQQQSPDSQNPQHPQHLPYLRSYENLGLRNCSYDMNLCNGVRYPFTYPSVQASGQDFPDTKVPPNLINNYHLLNSMWPNHIDSMSRAQMQYPQMQY-SQCNYNPLQPSVPTHYSIPSENQMFIEQVKTMVIDQAHLQNCQKMNFSDYSMLASEYSKSDVNSS------NRAKECVICGMENGDTYHQDGNENFHCLNCVRKNPCVNPSLDLIPSYKKNQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTMSMKYMDQEFPIKSETQLMSSPFTNGHCIQQTTDKYDSTFRHHGFELTQPPSNINDMVQHPITNISHHGPFDYIPQ 363

[Close]

BLAST of GATA456-2 vs. TrEMBL
Match: G0PAQ2 (Uncharacterized protein OS=Caenorhabditis brenneri OX=135651 GN=CAEBREN_00985 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.308e-22
Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 2

Query:  650 KECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTA-KRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +ECV CG+ N   + +DG+GN+ C  C          L    ++    + K   R+Q A KRTG++C NC T NTTLWRRN EG PVCNACGLYY+LHK  RP  M+K+ +Q+
Sbjct:  210 RECVNCGVHNTPLWRRDGSGNYLCNAC---------GLYFKMNHHARPLVKPKKRQQNAQKRTGIECVNCHTNNTTLWRRNGEGHPVCNACGLYYKLHKVERPMAMKKDGIQT 313

[Close]

BLAST of GATA456-2 vs. TrEMBL
Match: G0NRC3 (CBN-ELT-1 protein OS=Caenorhabditis brenneri OX=135651 GN=Cbn-elt-1 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.603e-22
Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 2

Query:  650 KECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTA-KRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +ECV CG+ N   + +DG+GN+ C  C          L    ++    + K   R+Q A KRTG++C NC T NTTLWRRN EG PVCNACGLYY+LHK  RP  M+K+ +Q+
Sbjct:  210 RECVNCGVHNTPLWRRDGSGNYLCNAC---------GLYFKMNHHARPLVKPKKRQQNAQKRTGIECVNCHTNNTTLWRRNGEGHPVCNACGLYYKLHKVERPMAMKKDGIQT 313

[Close]

BLAST of GATA456-2 vs. TrEMBL
Match: A0A061ACV8 (Transcription factor elt-1 OS=Caenorhabditis elegans OX=6239 GN=elt-1 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.078e-21
Identity = 50/112 (44.64%), Postives = 69/112 (61.61%), Query Frame = 2

Query:  650 KECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +ECV CG+ N   + +DG+GN+ C  C          L    ++    + K   R+   KRTG++C NC+T  TTLWRRN EG PVCNACGLY++LHK  RP TM+K+ +Q+
Sbjct:  215 RECVNCGVHNTPLWRRDGSGNYLCNAC---------GLYFKMNHHARPLVKPKKRQNAQKRTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERPITMKKDGIQT 317

[Close]

BLAST of GATA456-2 vs. Ensembl Cavefish
Match: gata6 (GATA binding protein 6 [Source:NCBI gene;Acc:103028246])

HSP 1 Score: 100.908 bits (250), Expect = 1.245e-22
Identity = 50/113 (44.25%), Postives = 67/113 (59.29%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            A+ECV CG  +   + +DG G+F C  C   +     S  LI         K   R  +++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  M+KE +Q+
Sbjct:  292 ARECVNCGSVSTPLWRRDGTGHFLCNACGLYSKMNGLSRPLI---------KPQKRMASSRRLGLSCANCQTSTTTLWRRNAEGEPVCNACGLYTKLHGVPRPLAMKKEGIQT 395

[Close]

BLAST of GATA456-2 vs. Ensembl Cavefish
Match: ENSAMXT00000017595.2 (GATA-binding factor 1-B-like [Source:NCBI gene;Acc:103031807])

HSP 1 Score: 100.138 bits (248), Expect = 1.293e-22
Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCV-------RKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
              A+ECV CG      + +DG G++ C  C        +  P + P   L+                 +KR G QC+NC+T  TTLWRRN+ G+PVCNACGLY++LH  +RP TM+KE +Q+
Sbjct:  237 TEARECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIRPKKRLV----------------VSKRAGTQCANCQTSTTTLWRRNANGEPVCNACGLYFKLHNVNRPLTMKKEGIQT 342

[Close]

BLAST of GATA456-2 vs. Ensembl Cavefish
Match: gata3 (GATA binding protein 3 [Source:NCBI gene;Acc:103042823])

HSP 1 Score: 97.4413 bits (241), Expect = 1.455e-21
Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C   +     +  LI         K   R   A+R G  C+NC+T  TTLWRRN+ G PVCNACGLYY+LH  +RP TM+KE +Q+
Sbjct:  253 SEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLI---------KPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQT 358

[Close]

BLAST of GATA456-2 vs. Ensembl Cavefish
Match: gata3 (GATA binding protein 3 [Source:NCBI gene;Acc:103042823])

HSP 1 Score: 97.0561 bits (240), Expect = 1.562e-21
Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            +  +ECV CG  +   + +DG G++ C  C   +     +  LI         K   R   A+R G  C+NC+T  TTLWRRN+ G PVCNACGLYY+LH  +RP TM+KE +Q+
Sbjct:  255 SEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLI---------KPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQT 360

[Close]

BLAST of GATA456-2 vs. Ensembl Cavefish
Match: gata1a (GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268])

HSP 1 Score: 96.2857 bits (238), Expect = 1.628e-21
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            A+ECV CG      + +DG G++ C  C                +K +  N+ L R +     +KR G QC+NC+T  TTLWRRN  G+PVCNACGLY++LH  +RP TM+K+ +Q+
Sbjct:  200 ARECVNCGATATPLWRRDGTGHYLCNACGLY-------------HKMNGQNRPLIRPKKRLIVSKRAGTQCANCQTSTTTLWRRNVNGEPVCNACGLYFKLHNVNRPLTMKKDGIQT 303

[Close]

BLAST of GATA456-2 vs. Ensembl Sea Lamprey
Match: gata3 (GATA binding protein 3 [Source:NCBI gene;Acc:30458])

HSP 1 Score: 93.2041 bits (230), Expect = 2.148e-22
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C   +     +  LI         K   R   A+R G  C+NC+T  TTLWRRN+ G PVCNACGLYY+LH  +RP TM+KE +Q+
Sbjct:    2 GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLI---------KPKRRLSAARRAGTSCANCQTTITTLWRRNASGDPVCNACGLYYKLHNINRPLTMKKEGIQT 105

[Close]

BLAST of GATA456-2 vs. Ensembl Sea Lamprey
Match: gata2b (GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440])

HSP 1 Score: 90.5077 bits (223), Expect = 1.262e-21
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C   +     +  LI         K   R   ++R G  C+NC+T  TTLWRRN  G+PVCNACGLYY+LH  +RP +M+KE +Q+
Sbjct:   59 GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLI---------KPKRRLSASRRAGTACANCQTTTTTLWRRNPNGEPVCNACGLYYKLHNVNRPMSMKKEGIQT 162

[Close]

BLAST of GATA456-2 vs. Ensembl Sea Lamprey
Match: gata2b (GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440])

HSP 1 Score: 90.1225 bits (222), Expect = 5.257e-21
Identity = 46/120 (38.33%), Postives = 64/120 (53.33%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCV-------RKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C        +  P + P   L  S                +R G  C+NC+T  TTLWRRN  G+PVCNACGLYY+LH  +RP +M+KE +Q+
Sbjct:   27 GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAS----------------RRAGTACANCQTTTTTLWRRNPNGEPVCNACGLYYKLHNVNRPMSMKKEGIQT 130

[Close]

BLAST of GATA456-2 vs. Ensembl Sea Lamprey
Match: gata4 (GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476])

HSP 1 Score: 68.9366 bits (167), Expect = 1.664e-14
Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG G++ C  C   N             K + +N+ L + Q     ++R GL CSNC+T  TTLWRRN+EG+P   ACG+   +    RP  M+K+ +Q+
Sbjct:   13 GRECVNCGAMSTPLWRRDGTGHYLCNACGLYN-------------KMNGINRPLIKPQRRMSGSRRVGLSCSNCQTSTTTLWRRNAEGEPGYIACGIIV-IEGVPRPLAMKKDGIQT 115

[Close]

BLAST of GATA456-2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000698.1 (pep scaffold:Pmarinus_7.0:GL479144:20133:30389:-1 gene:ENSPMAG00000000635.1 transcript:ENSPMAT00000000698.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 58.9214 bits (141), Expect = 8.579e-10
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 2

Query:  818 QTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKE 973
            Q  +  GL C NC T  TTLWR+N+ G  VCNACGLY +LH   RP ++ K+
Sbjct:    1 QRKRGQGLFCVNCLTTTTTLWRKNAGGVYVCNACGLYEKLHSAPRPLSIIKQ 52

[Close]

BLAST of GATA456-2 vs. Ensembl Yeast
Match: GLN3 (Transcriptional activator of genes regulated by nitrogen catabolite repression; localization and activity regulated by quality of nitrogen source and Ure2p [Source:SGD;Acc:S000000842])

HSP 1 Score: 70.0922 bits (170), Expect = 2.620e-13
Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 2

Query:  716 HCLNCVRKNPCVNP-SLDLIPSYKK----SQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQ 982
            +  N VRKN  + P S   + ++K+    S    N+      K+  +QC NCKT  T LWRR+ EG  +CNACGL+ +LH T RP +++ ++++
Sbjct:  258 NTTNSVRKNSLIKPMSSTSLANFKRAASVSSSISNMEPSGQNKKPLIQCFNCKTFKTPLWRRSPEGNTLCNACGLFQKLHGTMRPLSLKSDVIK 351

[Close]

BLAST of GATA456-2 vs. Ensembl Yeast
Match: GAT1 (Transcriptional activator of nitrogen catabolite repression genes; contains a GATA-1-type zinc finger DNA-binding motif; activity and localization regulated by nitrogen limitation and Ure2p; different translational starts produce two major and two minor isoforms that are differentially regulated and localized [Source:SGD;Acc:S000001873])

HSP 1 Score: 64.6994 bits (156), Expect = 9.988e-12
Identity = 23/54 (42.59%), Postives = 38/54 (70.37%), Query Frame = 2

Query:  821 TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQ 982
            T+    ++CSNC T  T LWR++ +G P+CNACGL+ +LH   RP +++ +I++
Sbjct:  302 TSSNPDIKCSNCTTSTTPLWRKDPKGLPLCNACGLFLKLHGVTRPLSLKTDIIK 355

[Close]

BLAST of GATA456-2 vs. Ensembl Yeast
Match: GZF3 (GATA zinc finger protein; negatively regulates nitrogen catabolic gene expression by competing with Gat1p for GATA site binding; function requires a repressive carbon source; dimerizes with Dal80p and binds to Tor1p; GZF3 has a paralog, DAL80, that arose from the whole genome duplication [Source:SGD;Acc:S000003646])

HSP 1 Score: 56.9954 bits (136), Expect = 2.937e-9
Identity = 21/47 (44.68%), Postives = 32/47 (68.09%), Query Frame = 2

Query:  845 CSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            C NC T  T LWRR+  G  +CNACGL+ +LH   RP +++ ++++S
Sbjct:  131 CKNCLTSTTPLWRRDEHGAMLCNACGLFLKLHGKPRPISLKTDVIKS 177

[Close]

BLAST of GATA456-2 vs. Ensembl Yeast
Match: DAL80 (Negative regulator of genes in multiple nitrogen degradation pathways; expression is regulated by nitrogen levels and by Gln3p; member of the GATA-binding family, forms homodimers and heterodimers with Gzf3p; DAL80 has a paralog, GZF3, that arose from the whole genome duplication [Source:SGD;Acc:S000001742])

HSP 1 Score: 54.299 bits (129), Expect = 9.543e-9
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 2

Query:  845 CSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            C NC T  T LWRR+  G  +CNACGL+ +LH   RP +++ + ++S
Sbjct:   31 CQNCFTVKTPLWRRDEHGTVLCNACGLFLKLHGEPRPISLKTDTIKS 77

[Close]

BLAST of GATA456-2 vs. Ensembl Nematostella
Match: GATA (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFY2])

HSP 1 Score: 92.8189 bits (229), Expect = 1.318e-20
Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
             +ECV CG  +   + +DG+G++ C  C   +     S  LI         K   R   A+R G  C+NC T  TTLWRRN  G PVCNACGLY++LH  +RP +M+K+ +Q+
Sbjct:  215 GRECVNCGATSTPLWRRDGSGHYLCNACGLYHKMNGSSRPLI---------KPKRRLSAARRAGTSCANCHTTQTTLWRRNQNGDPVCNACGLYWKLHAVNRPLSMKKDGIQT 318

[Close]

BLAST of GATA456-2 vs. Ensembl Medaka
Match: gata5 (GATA binding protein 5 [Source:NCBI gene;Acc:101164399])

HSP 1 Score: 100.523 bits (249), Expect = 6.181e-23
Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ-----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSXXXXXXXXXXXXXXYMDQEFPIKSETQIMSSPFTN 1090
             +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     T++R GL C+NC T  TTLWRRN+EG+PVCNACGLY +LH   RP  M+KE +Q+RKRK K  +       +    +KSE  +  SP+  
Sbjct:  178 GRECVNCGSVSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQKRLQSTSRRAGLCCTNCHTSTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKLPKNRTSAVSEHASTVKSEPTLAPSPYAG 317

[Close]

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ-----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSXXXXXXXXXXXXXXYMDQEFPIKSETQIMSSPFTN 1090
             +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     T++R GL C+NC T  TTLWRRN+EG+PVCNACGLY +LH   RP  M+KE +Q+RKRK K  +       +    +KSE  +  SP+  
Sbjct:  178 GRECVNCGSVSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQKRLQSTSRRAGLCCTNCHTSTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKLPKNRTSAVSEHASTVKSEPTLAPSPYAG 317

[Close]

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQ-----TAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSXXXXXXXXXXXXXXYMDQEFPIKSETQIMSSPFTN 1090
             +ECV CG  +   + +DG G++ C  C                +K + +N+ L + Q     T++R GL C+NC T  TTLWRRN+EG+PVCNACGLY +LH   RP  M+KE +Q+RKRK K  +       +    +KSE  +  SP+  
Sbjct:  178 GRECVNCGSVSTPLWRRDGTGHYLCNACGLY-------------HKMNGINRPLIKPQKRLQSTSRRAGLCCTNCHTSTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKLPKNRTSAVSEHASTVKSEPTLAPSPYAG 317

[Close]

BLAST of GATA456-2 vs. Ensembl Medaka
Match: gata6 (GATA binding protein 6 [Source:NCBI gene;Acc:101159296])

HSP 1 Score: 100.908 bits (250), Expect = 1.191e-22
Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 2

Query:  641 NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
              ++ECV CG  +   + +DG G+F C  C   +     S  LI         K   R  T++R GL C+NC+T  TTLWRRN+EG+PVCNACGLY +LH   RP  M+KE +Q+
Sbjct:  287 GESRECVNCGSISTPLWRRDGTGHFLCNACGLYSKMNGLSRPLI---------KPQKRTSTSRRIGLSCANCQTSTTTLWRRNAEGEPVCNACGLYTKLHGVPRPLAMKKEGIQT 392

[Close]

BLAST of GATA456-2 vs. Ensembl Medaka
Match: gata-1 (hematopietic transcription factor GATA-1 [Source:NCBI gene;Acc:100125425])

HSP 1 Score: 100.138 bits (248), Expect = 1.304e-22
Identity = 49/120 (40.83%), Postives = 66/120 (55.00%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCV-------RKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            A+ECV CG      + +DG G++ C  C        +  P + P   LI                 +KR G QC+NC T  TTLWRRN+ G+PVCNACGLY++LH  +RP TM+KE +Q+
Sbjct:  235 ARECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIRPKKRLI----------------VSKRAGTQCANCHTSTTTLWRRNANGEPVCNACGLYFKLHNVNRPLTMKKEGIQT 338

[Close]

BLAST of GATA456-2 vs. Planmine SMEST
Match: SMESG000022702.1 (SMESG000022702.1)

HSP 1 Score: 678.707 bits (1750), Expect = 0.000e+0
Identity = 361/362 (99.72%), Postives = 362/362 (100.00%), Query Frame = 2

Query:  155 DSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLINNYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSMMAXXXXXXXXXXXXXXXXXNRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSXXXXXXXXXXXXXXYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ 1240
            DSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLINNYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSM+ASEYSKSDDFLSSSVNSSNRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTMCMKYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ
Sbjct:   29 DSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLINNYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSMLASEYSKSDDFLSSSVNSSNRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTMCMKYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ 390

[Close]

BLAST of GATA456-2 vs. Planmine SMEST
Match: SMESG000022702.1 (SMESG000022702.1)

HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 352/362 (97.24%), Postives = 353/362 (97.51%), Query Frame = 2

Query:  155 DSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLINNYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSMMAXXXXXXXXXXXXXXXXXNRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSXXXXXXXXXXXXXXYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ 1240
            DSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLINNYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSM+ASEYSKSD   S      NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTMCMKYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ
Sbjct:   29 DSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLINNYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSMLASEYSKSDVNSS------NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTMCMKYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ 384

[Close]

BLAST of GATA456-2 vs. Planmine SMEST
Match: SMESG000022702.1 (SMESG000022702.1)

HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0
Identity = 351/363 (96.69%), Postives = 353/363 (97.25%), Query Frame = 2

Query:  155 DSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLIN-NYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSMMAXXXXXXXXXXXXXXXXXNRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSXXXXXXXXXXXXXXYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ 1240
            DSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLIN +YHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSM+ASEYSKSD   S      NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTMCMKYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ
Sbjct:   29 DSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPSAQGSNQDYSDPKVPSNLINIDYHLLNSMWPNHMDSISRSQMQYPSMQYPSQCNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSMLASEYSKSDVNSS------NRAKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTMCMKYMDQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDMVQHPITNISHHGPFDYIPQ 385

[Close]

BLAST of GATA456-2 vs. Planmine SMEST
Match: SMESG000039559.1 (SMESG000039559.1)

HSP 1 Score: 107.842 bits (268), Expect = 4.882e-25
Identity = 53/120 (44.17%), Postives = 77/120 (64.17%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARK-------QTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            ++ECV CG  N   + +D +G + C  C R +   + +L+ +P+ + S   +N   K       Q  KR+ L+CSNCK   T+LWRRN+EG+PVCNACGLYY+LHK+ RP +MRKE +Q+
Sbjct:  257 SRECVNCGASNTQLWSRDNSGYYLCDECDRFSQNNSRNLEKLPTNQVSSSTENEFMKKSNANFQQYGKRSDLECSNCKITKTSLWRRNNEGEPVCNACGLYYKLHKSLRPLSMRKEGIQT 376

[Close]

BLAST of GATA456-2 vs. Planmine SMEST
Match: SMESG000037031.1 (SMESG000037031.1)

HSP 1 Score: 107.842 bits (268), Expect = 4.882e-25
Identity = 53/120 (44.17%), Postives = 77/120 (64.17%), Query Frame = 2

Query:  647 AKECVICGMENGDTYHQDGNGNFHCLNCVRKNPCVNPSLDLIPSYKKSQMNKNLARK-------QTAKRTGLQCSNCKTENTTLWRRNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQS 985
            ++ECV CG  N   + +D +G + C  C R +   + +L+ +P+ + S   +N   K       Q  KR+ L+CSNCK   T+LWRRN+EG+PVCNACGLYY+LHK+ RP +MRKE +Q+
Sbjct:  257 SRECVNCGASNTQLWSRDNSGYYLCDECDRFSQNNSRNLEKLPTNQVSSSTENEFMKKSNANFQQYGKRSDLECSNCKITKTSLWRRNNEGEPVCNACGLYYKLHKSLRPLSMRKEGIQT 376

The following BLAST results are available for this feature:

BLAST of GATA456-2 vs. Ensembl Human
BLAST of GATA456-2 vs. Ensembl Celegans
BLAST of GATA456-2 vs. Ensembl Fly
BLAST of GATA456-2 vs. Ensembl Zebrafish
BLAST of GATA456-2 vs. Ensembl Xenopus
BLAST of GATA456-2 vs. Ensembl Mouse
BLAST of GATA456-2 vs. UniProt/SwissProt
BLAST of GATA456-2 vs. TrEMBL
BLAST of GATA456-2 vs. Ensembl Cavefish
BLAST of GATA456-2 vs. Ensembl Sea Lamprey
BLAST of GATA456-2 vs. Ensembl Yeast
BLAST of GATA456-2 vs. Ensembl Nematostella
BLAST of GATA456-2 vs. Ensembl Medaka
BLAST of GATA456-2 vs. Planmine SMEST

BLAST of GATA456-2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
GATA4	3.056e-22	40.34	GATA binding protein 4 [Source:HGNC Symbol;Acc:HGN...	[more]
GATA4	3.056e-22	40.34	GATA binding protein 4 [Source:HGNC Symbol;Acc:HGN...	[more]
GATA4	5.429e-22	41.03	GATA binding protein 4 [Source:HGNC Symbol;Acc:HGN...	[more]
GATA4	5.429e-22	41.03	GATA binding protein 4 [Source:HGNC Symbol;Acc:HGN...	[more]
GATA4	7.886e-22	40.34	GATA binding protein 4 [Source:HGNC Symbol;Acc:HGN...	[more]

BLAST of GATA456-2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
elt-1	2.860e-25	44.64	Transcription factor elt-1 [Source:UniProtKB/Swis...	[more]
elt-1	4.116e-25	44.64	Transcription factor elt-1 [Source:UniProtKB/Swis...	[more]
elt-1	4.162e-25	46.02	Transcription factor elt-1 [Source:UniProtKB/Swis...	[more]
elt-1	6.171e-25	46.02	Transcription factor elt-1 [Source:UniProtKB/Swis...	[more]
elt-1	6.213e-25	46.02	Transcription factor elt-1 [Source:UniProtKB/Swis...	[more]

BLAST of GATA456-2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
grn	1.371e-22	42.48	gene:FBgn0001138 transcript:FBtr0081808	[more]
grn	1.739e-22	42.48	gene:FBgn0001138 transcript:FBtr0330188	[more]
grn	1.875e-22	41.67	gene:FBgn0001138 transcript:FBtr0300040	[more]
pnr	1.714e-21	39.34	gene:FBgn0003117 transcript:FBtr0083221	[more]
pnr	1.836e-21	39.34	gene:FBgn0003117 transcript:FBtr0335427	[more]

BLAST of GATA456-2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
gata1b	2.237e-22	43.36	GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-...	[more]
gata6	2.528e-22	43.36	GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
gata1a	3.420e-22	40.00	GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-...	[more]
gata1a	3.420e-22	40.00	GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-...	[more]
gata1b	3.745e-22	41.88	GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-...	[more]

BLAST of GATA456-2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
gata3	1.303e-21	42.48	GATA binding protein 3 [Source:NCBI gene;Acc:44839...	[more]
gata3	1.432e-21	42.48	GATA binding protein 3 [Source:NCBI gene;Acc:44839...	[more]
gata5	2.875e-21	40.34	GATA binding protein 5 [Source:NCBI gene;Acc:49685...	[more]
mcm4	3.379e-21	39.50	minichromosome maintenance complex component 4 [So...	[more]
gata5	3.534e-21	40.34	GATA binding protein 5 [Source:NCBI gene;Acc:49685...	[more]

BLAST of GATA456-2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Gata5	2.304e-22	42.02	GATA binding protein 5 [Source:MGI Symbol;Acc:MGI:...	[more]
Gata4	3.433e-22	40.34	GATA binding protein 4 [Source:MGI Symbol;Acc:MGI:...	[more]
Gata4	6.727e-22	40.34	GATA binding protein 4 [Source:MGI Symbol;Acc:MGI:...	[more]
Gata4	6.931e-22	40.34	GATA binding protein 4 [Source:MGI Symbol;Acc:MGI:...	[more]
Gata3	1.316e-21	41.74	GATA binding protein 3 [Source:MGI Symbol;Acc:MGI:...	[more]

BLAST of GATA456-2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P28515\|ELT1_CAEEL	5.295e-24	46.02	Transcription factor elt-1 OS=Caenorhabditis elega...	[more]
sp\|P91623\|GATAC_DROME	1.374e-21	42.48	GATA-binding factor C OS=Drosophila melanogaster O...	[more]
sp\|P97489\|GATA5_MOUSE	1.611e-21	42.02	Transcription factor GATA-5 OS=Mus musculus OX=100...	[more]
sp\|P43694\|GATA4_HUMAN	3.902e-21	40.34	Transcription factor GATA-4 OS=Homo sapiens OX=960...	[more]
sp\|P46152\|GATA4_RAT	4.507e-21	40.34	Transcription factor GATA-4 OS=Rattus norvegicus O...	[more]

BLAST of GATA456-2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1L6KW39	0.000e+0	97.03	GATA456-2 OS=Schmidtea mediterranea OX=79327 GN=ga...	[more]
F1CDE5	0.000e+0	90.27	GATA456b OS=Schmidtea polychroa OX=50054 PE=2 SV=1	[more]
G0PAQ2	7.308e-22	46.90	Uncharacterized protein OS=Caenorhabditis brenneri...	[more]
G0NRC3	8.603e-22	46.90	CBN-ELT-1 protein OS=Caenorhabditis brenneri OX=13...	[more]
A0A061ACV8	1.078e-21	44.64	Transcription factor elt-1 OS=Caenorhabditis elega...	[more]

BLAST of GATA456-2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
gata6	1.245e-22	44.25	GATA binding protein 6 [Source:NCBI gene;Acc:10302...	[more]
ENSAMXT00000017595.2	1.293e-22	39.34	GATA-binding factor 1-B-like [Source:NCBI gene;Acc...	[more]
gata3	1.455e-21	41.74	GATA binding protein 3 [Source:NCBI gene;Acc:10304...	[more]
gata3	1.562e-21	41.74	GATA binding protein 3 [Source:NCBI gene;Acc:10304...	[more]
gata1a	1.628e-21	41.03	GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-...	[more]

BLAST of GATA456-2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
gata3	2.148e-22	42.48	GATA binding protein 3 [Source:NCBI gene;Acc:30458...	[more]
gata2b	1.262e-21	40.71	GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-...	[more]
gata2b	5.257e-21	38.33	GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-...	[more]
gata4	1.664e-14	35.04	GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-9...	[more]
ENSPMAT00000000698.1	8.579e-10	51.92	pep scaffold:Pmarinus_7.0:GL479144:20133:30389:-1 ...	[more]

BLAST of GATA456-2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 4


Match Name	E-value	Identity	Description
GLN3	2.620e-13	37.23	Transcriptional activator of genes regulated by ni...	[more]
GAT1	9.988e-12	42.59	Transcriptional activator of nitrogen catabolite r...	[more]
GZF3	2.937e-9	44.68	GATA zinc finger protein; negatively regulates nit...	[more]
DAL80	9.543e-9	44.68	Negative regulator of genes in multiple nitrogen d...	[more]

BLAST of GATA456-2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
GATA	1.318e-20	40.71	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of GATA456-2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
gata5	6.181e-23	37.91	GATA binding protein 5 [Source:NCBI gene;Acc:10116...	[more]
gata5	6.181e-23	37.91	GATA binding protein 5 [Source:NCBI gene;Acc:10116...	[more]
gata5	6.181e-23	37.91	GATA binding protein 5 [Source:NCBI gene;Acc:10116...	[more]
gata6	1.191e-22	43.48	GATA binding protein 6 [Source:NCBI gene;Acc:10115...	[more]
gata-1	1.304e-22	40.83	hematopietic transcription factor GATA-1 [Source:N...	[more]

BLAST of GATA456-2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000022702.1	0.000e+0	99.72	SMESG000022702.1	[more]
SMESG000022702.1	0.000e+0	97.24	SMESG000022702.1	[more]
SMESG000022702.1	0.000e+0	96.69	SMESG000022702.1	[more]
SMESG000039559.1	4.882e-25	44.17	SMESG000039559.1	[more]
SMESG000037031.1	4.882e-25	44.17	SMESG000037031.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30002349 ID=SMED30002349|Name=GATA456-2|organism=Schmidtea mediterranea sexual|type=transcript|length=1336bp
CTGAAATCGATTGGCTAATAGTTTCTATGCGAATTATCGTATCGGATAAA
TCGGCCAATCAAATTCAAGCGACAGTGAAGATGAAATAAAGTATTTTATC
AGGACGAATTCAGTAACCTGGCATATTATCAGTATGCACCAGCAACAATC
ACCAGATTCCCAAAATCCTCAACATCCTCAACATTTGCCATATCTAAGAA
GTTATGAGAATTTGGGCTTACGGAATTGCTCTTACGACATGAATATTTGC
AGTGGAGTGAGATATCCTTTTAATTATCCATCAGCACAGGGGTCGAATCA
AGACTATTCTGATCCCAAAGTTCCATCAAATCTCATCAACAATTATCATC
TTTTGAATTCGATGTGGCCGAATCATATGGACTCGATATCTCGGTCACAA
ATGCAGTATCCATCAATGCAGTATCCGTCACAGTGCAATTACAACCCCTT
GCAGCCGTCAGTTCCAGGCCACTATTCGATCCCACCAGAAAACCAAATGT
TCATCGAGCAAGTGAAAACCATGGTCAACGACCAAGCGCATTTACAAAAC
TGTCAGAAAATGAATTTCTCCGACTATTCCATGATGGCGTCCGAATATTC
AAAATCCGATGATTTTCTCTCCTCGTCAGTCAACTCGTCAAACCGAGCAA
AGGAATGCGTAATTTGTGGAATGGAAAACGGAGACACCTATCACCAAGAC
GGCAACGGGAATTTCCATTGCTTGAATTGCGTCAGAAAAAATCCCTGCGT
CAATCCGTCATTGGACTTGATTCCGTCGTATAAAAAGTCTCAAATGAACA
AAAATCTCGCGAGAAAACAAACTGCAAAACGAACAGGACTCCAGTGCTCG
AACTGCAAAACTGAAAATACGACTCTTTGGCGAAGGAACAGTGAAGGCCA
GCCAGTATGCAACGCATGCGGTCTCTATTACCGGCTTCATAAAACGCATC
GGCCTCCGACAATGAGGAAAGAGATACTCCAAAGCAGGAAACGAAAAACG
AAAAAGAAGCAAACCATGTGCATGAAATATATGGATCAAGAATTCCCGAT
CAAATCAGAAACCCAAATCATGTCGTCTCCATTCACAAATGGACATTGCA
TACCGACAACAGACAAATACGATTCCTCATTTCGACATCACTCATTCGAG
TTGACCCAGCCGCCTTCCAATATCAATGATATGGTCCAGCATCCGATCAC
AAATATCAGCCACCATGGACCATTTGACTATATACCCCAATAGGAGGGGT
CTTCATTGTTCGTGTTCACTAACGCCGTTTGATAGATCGTTTTCATGTAG
AGTTTTATTAATATAGAATTGTTTGTTTTAAAAAAA

protein sequence of SMED30002349-orf-1

>SMED30002349-orf-1 ID=SMED30002349-orf-1|Name=SMED30002349-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=370bp
MHQQQSPDSQNPQHPQHLPYLRSYENLGLRNCSYDMNICSGVRYPFNYPS
AQGSNQDYSDPKVPSNLINNYHLLNSMWPNHMDSISRSQMQYPSMQYPSQ
CNYNPLQPSVPGHYSIPPENQMFIEQVKTMVNDQAHLQNCQKMNFSDYSM
MASEYSKSDDFLSSSVNSSNRAKECVICGMENGDTYHQDGNGNFHCLNCV
RKNPCVNPSLDLIPSYKKSQMNKNLARKQTAKRTGLQCSNCKTENTTLWR
RNSEGQPVCNACGLYYRLHKTHRPPTMRKEILQSRKRKTKKKQTMCMKYM
DQEFPIKSETQIMSSPFTNGHCIPTTDKYDSSFRHHSFELTQPPSNINDM
VQHPITNISHHGPFDYIPQ*

Aliases

The feature 'GATA456-2' has the following synonyms


Synonym
Spol-gata456b

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **cellular component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **molecular function**
Term	Definition
GO:0046872	metal ion binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0008270	zinc ion binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000101	muscle cell
PLANA:0000429	neoblast
PLANA:0002028	dorsal-ventral muscle cell
PLANA:0002142	parenchyma
PLANA:0007522	medial-lateral axis of the whole animal

Vocabulary: **INTERPRO**
Term	Definition
IPR039355	Transcription_factor_GATA
IPR000679	Znf_GATA
IPR013088	Znf_NHR/GATA

Vocabulary: **biological process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	PRINTS	PR00619	GATAZNFINGER	coord: 252..269 score: 53.3 coord: 234..251 score: 50.61
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 232..282 e-value: 8.3E-20 score: 81.8
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 238..271 e-value: 2.6E-14 score: 52.5
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 238..262
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 232..285 score: 26.337
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 237..280 e-value: 4.63856E-17 score: 72.4054
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	G3DSA:3.30.50.10		coord: 226..288 e-value: 3.4E-26 score: 92.5
IPR039355	Transcription factor GATA	PANTHER	PTHR10071	TRANSCRIPTION FACTOR GATA FAMILY MEMBER	coord: 4..348
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 229..291