kcnb

Overview
Namekcnb (AIX99545.1)
Smed IDSMED30002315
Length (bp)371
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of kcnb (SMED30002315) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for kcnb (SMED30002315) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30002315

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30002315SMESG000004060.1 dd_Smed_v4_19025_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30002315SMESG000004060.1 dd_Smed_v4_19025_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30002315SMESG000004060.1 dd_Smed_v4_19025_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30002315SMESG000004060.1 dd_Smed_v4_19025_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30002315SMESG000004060.1 KJ187187smed_ncbi_20200123PMID:25356635
Cowles et al., 2014		whole organism asexual adult colorimetric in situ hybridization evidence
neuronSMED30002315SMESG000004060.1 KJ187187smed_ncbi_20200123PMID:25356635
Cowles et al., 2014		whole organism asexual adult colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of kcnb vs. Ensembl Human
Match: KCNB2 (potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232])

HSP 1 Score: 96.2857 bits (238), Expect = 9.137e-24
Identity = 59/118 (50.00%), Postives = 81/118 (68.64%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDD 354
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + ++      L+     +  + K  ESAN    +DD
Sbjct:  372 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELI-----DVAVEKAGESANTKDSADD 484
[Close]
BLAST of kcnb vs. Ensembl Human
Match: KCNB1 (potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231])

HSP 1 Score: 93.5893 bits (231), Expect = 9.425e-23
Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYES 258
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   M ++
Sbjct:  368 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNMKDA 453
[Close]
BLAST of kcnb vs. Ensembl Human
Match: KCNB1 (potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231])

HSP 1 Score: 93.5893 bits (231), Expect = 9.425e-23
Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYES 258
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   M ++
Sbjct:  368 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNMKDA 453
[Close]
BLAST of kcnb vs. Ensembl Human
Match: KCNA5 (potassium voltage-gated channel subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:6224])

HSP 1 Score: 70.0922 bits (170), Expect = 1.273e-14
Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTES 225
            FWWA++TMTTVGYGDM P +  GK++GS C I GVL IALP+P+IV+NF  FY  E   E+    KEE  +GT+S
Sbjct:  471 FWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDHEEPAVLKEE--QGTQS 543
[Close]
BLAST of kcnb vs. Ensembl Human
Match: KCNA10 (potassium voltage-gated channel subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:6219])

HSP 1 Score: 68.5514 bits (166), Expect = 5.214e-14
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREK 183
            FWWA++TMTTVGYGDM P +P GK++G+ C I GVL IALP+P+IV+NF  FY  E   E+
Sbjct:  412 FWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEE 472
[Close]
BLAST of kcnb vs. Ensembl Celegans
Match: egl-36 (Potassium voltage-gated channel protein egl-36 [Source:UniProtKB/Swiss-Prot;Acc:G5EFC3])

HSP 1 Score: 70.0922 bits (170), Expect = 5.385e-15
Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEM 207
             WWAI TMTTVGYGDMTP +  G+L+GS C + GVL IALP+P+IV+NFA FY +   R+K  K++  +
Sbjct:  397 LWWAICTMTTVGYGDMTPHTSFGRLVGSLCAVMGVLTIALPVPVIVSNFAMFYSHNQARDKLPKRRRRV 465
[Close]
BLAST of kcnb vs. Ensembl Celegans
Match: shw-3 (SHaW family of potassium channels [Source:UniProtKB/TrEMBL;Acc:A0A3B1DVP6])

HSP 1 Score: 69.3218 bits (168), Expect = 8.515e-15
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQK 198
             WWAI+TMTT+GYGD+TP + LG+LIGS C + GVL IALP+P+IV+NFA FY +   R K  K++
Sbjct:  367 LWWAIVTMTTIGYGDITPHTYLGRLIGSICALAGVLTIALPVPVIVSNFAMFYSHTQARSKMPKKR 432
[Close]
BLAST of kcnb vs. Ensembl Celegans
Match: shw-3 (SHaW family of potassium channels [Source:UniProtKB/TrEMBL;Acc:A0A3B1DVP6])

HSP 1 Score: 69.3218 bits (168), Expect = 8.583e-15
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQK 198
             WWAI+TMTT+GYGD+TP + LG+LIGS C + GVL IALP+P+IV+NFA FY +   R K  K++
Sbjct:  385 LWWAIVTMTTIGYGDITPHTYLGRLIGSICALAGVLTIALPVPVIVSNFAMFYSHTQARSKMPKKR 450
[Close]
BLAST of kcnb vs. Ensembl Celegans
Match: shw-3 (SHaW family of potassium channels [Source:UniProtKB/TrEMBL;Acc:A0A3B1DVP6])

HSP 1 Score: 69.3218 bits (168), Expect = 8.593e-15
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQK 198
             WWAI+TMTT+GYGD+TP + LG+LIGS C + GVL IALP+P+IV+NFA FY +   R K  K++
Sbjct:  388 LWWAIVTMTTIGYGDITPHTYLGRLIGSICALAGVLTIALPVPVIVSNFAMFYSHTQARSKMPKKR 453
[Close]
BLAST of kcnb vs. Ensembl Celegans
Match: shk-1 (Potassium voltage-gated channel protein shk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4B0])

HSP 1 Score: 63.1586 bits (152), Expect = 1.144e-12
Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMA 210
            FW+ ++TMTTVGYGD+ P SP GK++G  C + GVL +ALP+PIIV NF  FY+ E  R  ++K K + A
Sbjct:  362 FWFVLVTMTTVGYGDLVPLSPFGKVVGGMCAMIGVLTLALPVPIIVANFKHFYRQE-NRLASMKSKGDDA 430
[Close]
BLAST of kcnb vs. Ensembl Fly
Match: Shab (gene:FBgn0262593 transcript:FBtr0305208)

HSP 1 Score: 104.375 bits (259), Expect = 7.945e-27
Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTV 342
            FWWA ITMTTVGYGD+ P + LGK+IG+ CCICGVLVIALPIPIIVNNFAEFYKN++RREKALK++E + +    GS++ S  + + K+  +  +  ID  V  +  ES  +++
Sbjct:  644 FWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIV-SFHHINLKDAFAKSMDLIDVIVDTEKRESHTRSL 756
[Close]
BLAST of kcnb vs. Ensembl Fly
Match: Shab (gene:FBgn0262593 transcript:FBtr0305209)

HSP 1 Score: 104.375 bits (259), Expect = 7.967e-27
Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTV 342
            FWWA ITMTTVGYGD+ P + LGK+IG+ CCICGVLVIALPIPIIVNNFAEFYKN++RREKALK++E + +    GS++ S  + + K+  +  +  ID  V  +  ES  +++
Sbjct:  644 FWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIV-SFHHINLKDAFAKSMDLIDVIVDTEKRESHTRSL 756
[Close]
BLAST of kcnb vs. Ensembl Fly
Match: Shab (gene:FBgn0262593 transcript:FBtr0333899)

HSP 1 Score: 104.375 bits (259), Expect = 8.168e-27
Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTV 342
            FWWA ITMTTVGYGD+ P + LGK+IG+ CCICGVLVIALPIPIIVNNFAEFYKN++RREKALK++E + +    GS++ S  + + K+  +  +  ID  V  +  ES  +++
Sbjct:  644 FWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIV-SFHHINLKDAFAKSMDLIDVIVDTEKRESHTRSL 756
[Close]
BLAST of kcnb vs. Ensembl Fly
Match: Shab (gene:FBgn0262593 transcript:FBtr0305206)

HSP 1 Score: 104.375 bits (259), Expect = 8.168e-27
Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTV 342
            FWWA ITMTTVGYGD+ P + LGK+IG+ CCICGVLVIALPIPIIVNNFAEFYKN++RREKALK++E + +    GS++ S  + + K+  +  +  ID  V  +  ES  +++
Sbjct:  644 FWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIV-SFHHINLKDAFAKSMDLIDVIVDTEKRESHTRSL 756
[Close]
BLAST of kcnb vs. Ensembl Fly
Match: Shab (gene:FBgn0262593 transcript:FBtr0305207)

HSP 1 Score: 103.605 bits (257), Expect = 1.283e-26
Identity = 56/79 (70.89%), Postives = 68/79 (86.08%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ P + LGK+IG+ CCICGVLVIALPIPIIVNNFAEFYKN++RREKALK++E + +    GS++
Sbjct:  644 FWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIV 722
[Close]
BLAST of kcnb vs. Ensembl Zebrafish
Match: kcnb1 (potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3])

HSP 1 Score: 93.9745 bits (232), Expect = 3.939e-23
Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYES 258
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + E+
Sbjct:  367 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNVREA 452
[Close]
BLAST of kcnb vs. Ensembl Zebrafish
Match: kcnb1 (potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3])

HSP 1 Score: 93.9745 bits (232), Expect = 4.053e-23
Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYES 258
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + E+
Sbjct:  371 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNVREA 456
[Close]
BLAST of kcnb vs. Ensembl Zebrafish
Match: kcnb1 (potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3])

HSP 1 Score: 93.9745 bits (232), Expect = 4.057e-23
Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYES 258
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + E+
Sbjct:  371 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNVREA 456
[Close]
BLAST of kcnb vs. Ensembl Zebrafish
Match: kcnb1 (potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3])

HSP 1 Score: 93.9745 bits (232), Expect = 4.057e-23
Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYES 258
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + E+
Sbjct:  371 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNVREA 456
[Close]
BLAST of kcnb vs. Ensembl Zebrafish
Match: kcnb1 (potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3])

HSP 1 Score: 93.9745 bits (232), Expect = 4.504e-23
Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYES 258
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + E+
Sbjct:  373 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNVREA 458
[Close]
BLAST of kcnb vs. Ensembl Xenopus
Match: KCNB2 (potassium channel, voltage gated Shab related subfamily B, member 2 [Source:NCBI gene;Acc:100489419])

HSP 1 Score: 94.3597 bits (233), Expect = 3.796e-23
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  372 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIV 450
[Close]
BLAST of kcnb vs. Ensembl Xenopus
Match: KCNA5 (potassium channel, voltage gated shaker related subfamily A, member 5 [Source:NCBI gene;Acc:496997])

HSP 1 Score: 70.8626 bits (172), Expect = 6.793e-15
Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMA--KGTESGSLLFSEMYES-KKEINSLVLSTIDNFV--LMKTNESANKTV 342
            FWWA++TMTTVGYGDM P +  GK++GS C I GVL IALP+P+IV+NF  FY  E   E+ +  KEE +  +G+ +G L  S    S  K ++   +  I+N    L KTN  A   V
Sbjct:  496 FWWAVVTMTTVGYGDMRPVTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDHEEQVMLKEESSSRQGSCAGDLKRSPSRASLSKSVHLENIEGINNGTGSLEKTNLKAKSNV 614
[Close]
BLAST of kcnb vs. Ensembl Xenopus
Match: KCNC2 (potassium channel, voltage gated Shaw related subfamily C, member 2 [Source:NCBI gene;Acc:100489216])

HSP 1 Score: 68.5514 bits (166), Expect = 1.360e-14
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREK-ALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTI---DNFVLMKTNESANKTVHSDDLLKE 366
            FWWA++TMTT+GYGDM P++  G L+G+ C + GVL IA+P+P+IVNNF  +Y   + ++K   K+K+ +    ++GS  F +M +     NS  + T    DN  LM+ N S   +  SD  L  
Sbjct:   30 FWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKYIPHAPQTGSPTFCKM-DLNMGCNSTQVDTCLGKDNR-LMEHNMSGEDSSGSDQPLSP 153
[Close]
BLAST of kcnb vs. Ensembl Xenopus
Match: meltf (melanotransferrin [Source:Xenbase;Acc:XB-GENE-968181])

HSP 1 Score: 68.5514 bits (166), Expect = 4.413e-14
Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEIN---------SLVLSTIDNFVLMKTNESANKT 339
            FWWAIITMTTVGYGD+ PK+ LGKL  +   +CGV+ IALPI  I+NNF ++Y  +   E A K + E+ +   +G  L +    S KE++          + +S  D F+   T E  ++T
Sbjct:  359 FWWAIITMTTVGYGDIYPKTTLGKLNAATSFLCGVIAIALPIHPIINNFVKYYNKQRVLETATKHELELMELHSNGGYLGAN--GSSKELSEGRGLSVGAHMKVSHSDTFIQALTEEKHHRT 478
[Close]
BLAST of kcnb vs. Ensembl Xenopus
Match: fastkd3 (FAST kinase domains 3 [Source:Xenbase;Acc:XB-GENE-5998409])

HSP 1 Score: 68.1662 bits (165), Expect = 5.463e-14
Identity = 36/56 (64.29%), Postives = 47/56 (83.93%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNE 168
            FWWA++TMTTVGYGDM+P++  GKL+GS C I GVL I+LP+P+IV+NF+ FY  E
Sbjct:  329 FWWAVVTMTTVGYGDMSPETVGGKLVGSLCAIAGVLTISLPVPVIVSNFSYFYHRE 384
[Close]
BLAST of kcnb vs. Ensembl Mouse
Match: Kcnb2 (potassium voltage gated channel, Shab-related subfamily, member 2 [Source:MGI Symbol;Acc:MGI:99632])

HSP 1 Score: 95.9005 bits (237), Expect = 9.155e-24
Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDD 354
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + ++      L+     +  + K  ESAN     DD
Sbjct:  372 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELI-----DVAVEKAGESANTKDSVDD 484
[Close]
BLAST of kcnb vs. Ensembl Mouse
Match: Kcnb2 (potassium voltage gated channel, Shab-related subfamily, member 2 [Source:MGI Symbol;Acc:MGI:99632])

HSP 1 Score: 95.9005 bits (237), Expect = 9.155e-24
Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDD 354
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + ++      L+     +  + K  ESAN     DD
Sbjct:  372 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELI-----DVAVEKAGESANTKDSVDD 484
[Close]
BLAST of kcnb vs. Ensembl Mouse
Match: Kcnb1 (potassium voltage gated channel, Shab-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96666])

HSP 1 Score: 93.9745 bits (232), Expect = 4.836e-23
Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYES 258
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   M ++
Sbjct:  368 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNMKDA 453
[Close]
BLAST of kcnb vs. Ensembl Mouse
Match: Kcnb1 (potassium voltage gated channel, Shab-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96666])

HSP 1 Score: 93.9745 bits (232), Expect = 4.836e-23
Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYES 258
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   M ++
Sbjct:  368 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNMKDA 453
[Close]
BLAST of kcnb vs. Ensembl Mouse
Match: Kcna10 (potassium voltage-gated channel, shaker-related subfamily, member 10 [Source:MGI Symbol;Acc:MGI:3037820])

HSP 1 Score: 69.3218 bits (168), Expect = 2.000e-14
Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAK 213
            FWWA++TMTTVGYGDM P +P GK++G+ C I GVL IALP+P+IV+NF  FY  E   E+      E+ K
Sbjct:  412 FWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKPNIPGELDK 482
[Close]
BLAST of kcnb vs. UniProt/SwissProt
Match: sp|P17970|KCNAB_DROME (Potassium voltage-gated channel protein Shab OS=Drosophila melanogaster OX=7227 GN=Shab PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.046e-25
Identity = 55/79 (69.62%), Postives = 68/79 (86.08%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ P + LGK+IG+ CCICGVLV+ALPIPIIVNNFAEFYKN++RREKALK++E + +    GS++
Sbjct:  614 FWWAGITMTTVGYGDICPTTALGKVIGTVCCICGVLVVALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIV 692
[Close]
BLAST of kcnb vs. UniProt/SwissProt
Match: sp|Q4ZHA6|KCNB2_BOVIN (Potassium voltage-gated channel subfamily B member 2 OS=Bos taurus OX=9913 GN=KCNB2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.121e-24
Identity = 60/118 (50.85%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDD 354
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + ++      L+     +  + KT ESAN    +DD
Sbjct:  372 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELI-----DVAVEKTGESANTKGSTDD 484
[Close]
BLAST of kcnb vs. UniProt/SwissProt
Match: sp|Q92953|KCNB2_HUMAN (Potassium voltage-gated channel subfamily B member 2 OS=Homo sapiens OX=9606 GN=KCNB2 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 4.388e-23
Identity = 59/118 (50.00%), Postives = 81/118 (68.64%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDD 354
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + ++      L+     +  + K  ESAN    +DD
Sbjct:  372 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELI-----DVAVEKAGESANTKDSADD 484
[Close]
BLAST of kcnb vs. UniProt/SwissProt
Match: sp|A6H8H5|KCNB2_MOUSE (Potassium voltage-gated channel subfamily B member 2 OS=Mus musculus OX=10090 GN=Kcnb2 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 6.404e-23
Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDD 354
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + ++      L+     +  + K  ESAN     DD
Sbjct:  372 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELI-----DVAVEKAGESANTKDSVDD 484
[Close]
BLAST of kcnb vs. UniProt/SwissProt
Match: sp|Q95L11|KCNB2_RABIT (Potassium voltage-gated channel subfamily B member 2 OS=Oryctolagus cuniculus OX=9986 GN=KCNB2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.723e-23
Identity = 58/118 (49.15%), Postives = 81/118 (68.64%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDD 354
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   + ++      L+     +  + K  E+AN    +DD
Sbjct:  372 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELI-----DVAVEKAGETANTKDSADD 484
[Close]
BLAST of kcnb vs. TrEMBL
Match: A0A0A1CQL4 (Kcnb (Fragment) OS=Schmidtea mediterranea OX=79327 GN=kcnb PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.023e-66
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTV 342
            FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGVLVIALPIPIIVNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTV
Sbjct:  192 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGVLVIALPIPIIVNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTV 305
[Close]
BLAST of kcnb vs. TrEMBL
Match: A0A448WHB5 (Ion_trans domain-containing protein (Fragment) OS=Protopolystoma xenopodis OX=117903 GN=PXEA_LOCUS5237 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.387e-30
Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSL 234
            FWWAIITMTTVGYGDMTPK+PLG++IGS CCICGVLV+ALPIPIIVNNFAEFYK+++RREKA+KQKE  AK  E GSL
Sbjct:  173 FWWAIITMTTVGYGDMTPKTPLGQIIGSGCCICGVLVVALPIPIIVNNFAEFYKDQMRREKAIKQKEAWAKAKELGSL 250
[Close]
BLAST of kcnb vs. TrEMBL
Match: A0A1B0GI56 (Ion_trans domain-containing protein OS=Lutzomyia longipalpis OX=7200 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.869e-28
Identity = 62/119 (52.10%), Postives = 86/119 (72.27%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL------FSEMYESKKEINSLVLSTIDNFVLMKTNESANKT 339
            FWWA ITMTTVGYGD+ P +PLGK+IG+ CCICGVLVIALPIPIIVNNFAEFYKN++RREKALK++E + +    GS++        + +    ++  +++ T D  VL++  + ++ T
Sbjct:   67 FWWAGITMTTVGYGDIYPTTPLGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIVSFHHINLRDAFAKSMDLIDVIVDTGDQCVLLEPPQDSSDT 185
[Close]
BLAST of kcnb vs. TrEMBL
Match: A0A423TZA7 (Potassium voltage-gated channel protein Shab OS=Penaeus vannamei OX=6689 GN=C7M84_025052 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.250e-26
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGDM P +PLGK+IGS CCICGVLV+ALPIPIIVNNFAEFYKN++RREKALK++E + +    GS++
Sbjct:  163 FWWAGITMTTVGYGDMYPITPLGKVIGSVCCICGVLVVALPIPIIVNNFAEFYKNQMRREKALKRREALERAKREGSIV 241
[Close]
BLAST of kcnb vs. TrEMBL
Match: A0A0P4WEC1 (Ion_trans domain-containing protein OS=Scylla olivacea OX=85551 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.603e-26
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGDM P +PLGK+IGS CCICGVLVIALPIPIIVNNFAEFYKN++RREKALK++E + +    GS++
Sbjct:  163 FWWAGITMTTVGYGDMYPITPLGKVIGSVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALERAKREGSIV 241
[Close]
BLAST of kcnb vs. Ensembl Cavefish
Match: KCNB1 (potassium voltage-gated channel subfamily B member 1-like [Source:NCBI gene;Acc:103041067])

HSP 1 Score: 94.3597 bits (233), Expect = 2.829e-23
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  364 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIV 442
[Close]
BLAST of kcnb vs. Ensembl Cavefish
Match: kcnb1 (potassium voltage-gated channel subfamily B member 1 [Source:NCBI gene;Acc:103042196])

HSP 1 Score: 94.3597 bits (233), Expect = 2.832e-23
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  371 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIV 449
[Close]
BLAST of kcnb vs. Ensembl Cavefish
Match: kcnb2 (potassium voltage-gated channel subfamily B member 2-like [Source:NCBI gene;Acc:103023195])

HSP 1 Score: 92.4337 bits (228), Expect = 1.178e-22
Identity = 51/86 (59.30%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYES 258
            FWWA ITMTTVGYGD+ P++ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++   M ++
Sbjct:  371 FWWATITMTTVGYGDIYPQTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNMKDA 456
[Close]
BLAST of kcnb vs. Ensembl Cavefish
Match: si:dkey-192j17.1 (potassium voltage-gated channel subfamily B member 2 [Source:NCBI gene;Acc:103036535])

HSP 1 Score: 92.4337 bits (228), Expect = 1.340e-22
Identity = 50/79 (63.29%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ P++ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  373 FWWATITMTTVGYGDIYPQTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIV 451
[Close]
BLAST of kcnb vs. Ensembl Cavefish
Match: KCNA10 (potassium voltage-gated channel subfamily A member 10-like [Source:NCBI gene;Acc:103039988])

HSP 1 Score: 67.3958 bits (163), Expect = 6.210e-14
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGS 231
            FWWA++TMTTVGYGDM P +  GK++G+ C I GVL IALP+P+IV+NF  FY  E  +E+     E   +  +SG+
Sbjct:  473 FWWAVVTMTTVGYGDMCPITLGGKMVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETEQEEKQPLAEASEQAAKSGT 549
[Close]
BLAST of kcnb vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001869.1 (pep scaffold:Pmarinus_7.0:GL480351:152:3521:-1 gene:ENSPMAG00000001700.1 transcript:ENSPMAT00000001869.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 92.8189 bits (229), Expect = 5.783e-24
Identity = 50/79 (63.29%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ P++ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  181 FWWATITMTTVGYGDIYPQTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAVKRREALERAKRNGSIV 259
[Close]
BLAST of kcnb vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006892.1 (pep scaffold:Pmarinus_7.0:GL486860:4567:5997:-1 gene:ENSPMAG00000006235.1 transcript:ENSPMAT00000006892.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 93.5893 bits (231), Expect = 5.980e-24
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  180 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAVKRREALDRAKRNGSIV 258
[Close]
BLAST of kcnb vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005395.1 (pep scaffold:Pmarinus_7.0:GL482646:8602:10978:-1 gene:ENSPMAG00000004908.1 transcript:ENSPMAT00000005395.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 90.8929 bits (224), Expect = 6.124e-23
Identity = 50/79 (63.29%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ P++ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  180 FWWATITMTTVGYGDIYPQTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAVKRREALERAKRNGSIV 258
[Close]
BLAST of kcnb vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004235.1 (pep scaffold:Pmarinus_7.0:GL476413:398954:411573:-1 gene:ENSPMAG00000003870.1 transcript:ENSPMAT00000004235.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 90.5077 bits (223), Expect = 6.458e-23
Identity = 51/79 (64.56%), Postives = 65/79 (82.28%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ P + LGK+IG  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  337 FWWATITMTTVGYGDIYPMTLLGKIIGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAVKRREALERAKRNGSIV 415
[Close]
BLAST of kcnb vs. Ensembl Sea Lamprey
Match: KCNA3 (potassium voltage-gated channel subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:6221])

HSP 1 Score: 67.3958 bits (163), Expect = 1.364e-14
Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRRE 180
            FWW+++TMTTVGYGDM+PK+  GK++GS C I GVL ++LP+P+IV+NF  FY+ E   E
Sbjct:  363 FWWSLVTMTTVGYGDMSPKTVGGKIVGSLCAIAGVLTVSLPVPVIVSNFNYFYQRETEGE 422
[Close]
BLAST of kcnb vs. Ensembl Nematostella
Match: EDO47871 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RL57])

HSP 1 Score: 77.411 bits (189), Expect = 6.556e-18
Identity = 42/65 (64.62%), Postives = 53/65 (81.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKN-----EIRRE 180
            FWW+IITMTTVGYGD+ P +PLGKL+GS CCI G++ IALPIP IV+NF++FYK+     E+RR 
Sbjct:  365 FWWSIITMTTVGYGDVYPVTPLGKLVGSLCCISGIIFIALPIPTIVSNFSQFYKDQRKSVEVRRR 429
[Close]
BLAST of kcnb vs. Ensembl Nematostella
Match: EDO42724 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S0S6])

HSP 1 Score: 76.2554 bits (186), Expect = 1.501e-17
Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEE 204
            FWWA++TMTTVGYGDM P+SP GK IGS C +CGVL IALP+P+IVNNF+ +Y +   R K  K++  
Sbjct:  336 FWWAVVTMTTVGYGDMAPQSPSGKFIGSLCAVCGVLTIALPVPVIVNNFSLYYSHAQARLKLPKKRRR 403
[Close]
BLAST of kcnb vs. Ensembl Nematostella
Match: EDO48063 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJZ2])

HSP 1 Score: 73.9442 bits (180), Expect = 2.209e-17
Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEM 207
            FWWAIITMTTVGYGDM+PK+  G++IGS C ICGVL+I LP+ +I NNF+ +Y++   R    ++K  +
Sbjct:  144 FWWAIITMTTVGYGDMSPKTLSGQIIGSLCAICGVLIIGLPVSVIGNNFSTYYEHAQARLNLPRKKRRL 212
[Close]
BLAST of kcnb vs. Ensembl Nematostella
Match: EDO46842 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RP32])

HSP 1 Score: 67.3958 bits (163), Expect = 5.993e-16
Identity = 35/52 (67.31%), Postives = 46/52 (88.46%), Query Frame = 1 
Query:    4 WWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFY 159
            WWAIITMTTVGYGD++PK+ +GK++GS C ICGVLVIALP+ ++ +NF+ FY
Sbjct:   46 WWAIITMTTVGYGDVSPKTWMGKVVGSACAICGVLVIALPVSVVASNFSIFY 97
[Close]
BLAST of kcnb vs. Ensembl Nematostella
Match: SHAK3 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SK45])

HSP 1 Score: 70.0922 bits (170), Expect = 2.042e-15
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNE 168
            FWWA++TMTTVGYGDM P +P GKL+GS C I GVL IALP+P+IV+NF  FYK E
Sbjct:  323 FWWAVVTMTTVGYGDMYPVTPWGKLVGSICAISGVLTIALPVPVIVSNFNYFYKRE 378
[Close]
BLAST of kcnb vs. Ensembl Medaka
Match: kcnb1 (potassium voltage-gated channel subfamily B member 1 [Source:NCBI gene;Acc:101167947])

HSP 1 Score: 93.2041 bits (230), Expect = 5.559e-23
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  365 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIV 443
[Close]
BLAST of kcnb vs. Ensembl Medaka
Match: ENSORLT00000035166.1 (potassium voltage-gated channel subfamily B member 2-like [Source:NCBI gene;Acc:101155143])

HSP 1 Score: 93.2041 bits (230), Expect = 7.088e-23
Identity = 50/79 (63.29%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ P++ LGK++G  CCI GVLVIALPIPIIVNNF+EFY+ + R+EKA+K++E + +   SGS++
Sbjct:  374 FWWATITMTTVGYGDIYPQTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYREQKRQEKAIKRREALERAKRSGSIV 452
[Close]
BLAST of kcnb vs. Ensembl Medaka
Match: kcnb1 (potassium voltage-gated channel subfamily B member 1 [Source:NCBI gene;Acc:101167947])

HSP 1 Score: 92.8189 bits (229), Expect = 7.579e-23
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  340 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIV 418
[Close]
BLAST of kcnb vs. Ensembl Medaka
Match: si:dkey-192j17.1 (potassium voltage-gated channel subfamily B member 2 [Source:NCBI gene;Acc:101174303])

HSP 1 Score: 91.6633 bits (226), Expect = 2.081e-22
Identity = 50/79 (63.29%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ P++ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  374 FWWATITMTTVGYGDIYPQTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIV 452
[Close]
BLAST of kcnb vs. Ensembl Medaka
Match: kcnb1 (potassium voltage-gated channel subfamily B member 1 [Source:NCBI gene;Acc:101167947])

HSP 1 Score: 91.2781 bits (225), Expect = 2.535e-22
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGD+ PK+ LGK++G  CCI GVLVIALPIPIIVNNF+EFYK + R+EKA+K++E + +   +GS++
Sbjct:  365 FWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIV 443
[Close]
BLAST of kcnb vs. Planmine SMEST
Match: SMESG000004060.1 (SMESG000004060.1)

HSP 1 Score: 226.098 bits (575), Expect = 6.170e-73
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDDLLKE 366
            FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGVLVIALPIPIIVNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDDLLKE
Sbjct:  406 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGVLVIALPIPIIVNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDDLLKE 527
[Close]
BLAST of kcnb vs. Planmine SMEST
Match: SMESG000054120.1 (SMESG000054120.1)

HSP 1 Score: 117.087 bits (292), Expect = 2.171e-31
Identity = 74/119 (62.18%), Postives = 87/119 (73.11%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTNESANKTVHSDDL 357
            FWWAIITMTTVGYGDM P+S LGK IGSFCCICGVLVIALPIPIIVNNFA++YK+++RREK LK+KE+MAK  E GS++ ++  E      S   S  +N  LMK N     T HS  L
Sbjct:  420 FWWAIITMTTVGYGDMVPESGLGKFIGSFCCICGVLVIALPIPIIVNNFADYYKDQLRREKTLKRKEDMAKAKEQGSIISTKSGEDDSSDFSFG-SDEENTSLMKRN-----TYHSQSL 532
[Close]
BLAST of kcnb vs. Planmine SMEST
Match: SMESG000029097.1 (SMESG000029097.1)

HSP 1 Score: 111.309 bits (277), Expect = 2.295e-29
Identity = 66/125 (52.80%), Postives = 91/125 (72.80%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDNFVLMKTN--------ESANKTVHSD 351
            FWWA ITMTTVGYGDM PK+ +GK+IGSFCC+CGVLV+ALPIPIIVNNFA++YK+++R+EKA+K+KEE+ +   SGS++    Y  +   +   LS IDN  ++  N        ES ++ +H+D
Sbjct:  716 FWWAAITMTTVGYGDMAPKTTMGKIIGSFCCLCGVLVVALPIPIIVNNFADYYKDQMRKEKAVKRKEELERAKRSGSIVSISSYCRRSFSD---LSEIDNNGIILDNLKKSPMFCESFDRLLHTD 837
[Close]
BLAST of kcnb vs. Planmine SMEST
Match: SMESG000026885.1 (SMESG000026885.1)

HSP 1 Score: 108.997 bits (271), Expect = 9.440e-29
Identity = 55/79 (69.62%), Postives = 70/79 (88.61%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGDM P++PLGK++GSFCC+CGVLV+ALPIPIIVNNFA+FYK ++R+EKAL ++E + K   SGS++
Sbjct:  373 FWWATITMTTVGYGDMAPQTPLGKVVGSFCCLCGVLVVALPIPIIVNNFADFYKEQLRKEKALDRREALEKARRSGSII 451
[Close]
BLAST of kcnb vs. Planmine SMEST
Match: SMESG000047530.1 (SMESG000047530.1)

HSP 1 Score: 108.227 bits (269), Expect = 2.434e-28
Identity = 55/79 (69.62%), Postives = 72/79 (91.14%), Query Frame = 1 
Query:    1 FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGXXXXXXXXXXXXNNFAEFYKNEIRREKALKQKEEMAKGTESGSLL 237
            FWWA ITMTTVGYGDM PK+PLGK+IGSFCC+CGVLV+ALPIPIIVNNFA++YK+++R+EKA+++ EE+ +   SGS++
Sbjct:  554 FWWAAITMTTVGYGDMAPKTPLGKVIGSFCCLCGVLVVALPIPIIVNNFADYYKDQLRKEKAVRRNEELERARRSGSIV 632
The following BLAST results are available for this feature:
BLAST of kcnb vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
KCNB29.137e-2450.00potassium voltage-gated channel subfamily B member... [more]
KCNB19.425e-2360.47potassium voltage-gated channel subfamily B member... [more]
KCNB19.425e-2360.47potassium voltage-gated channel subfamily B member... [more]
KCNA51.273e-1457.33potassium voltage-gated channel subfamily A member... [more]
KCNA105.214e-1460.66potassium voltage-gated channel subfamily A member... [more]
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BLAST of kcnb vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
egl-365.385e-1556.52Potassium voltage-gated channel protein egl-36 [S... [more]
shw-38.515e-1559.09SHaW family of potassium channels [Source:UniProt... [more]
shw-38.583e-1559.09SHaW family of potassium channels [Source:UniProt... [more]
shw-38.593e-1559.09SHaW family of potassium channels [Source:UniProt... [more]
shk-11.144e-1252.86Potassium voltage-gated channel protein shk-1 [So... [more]
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BLAST of kcnb vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Shab7.945e-2755.26gene:FBgn0262593 transcript:FBtr0305208[more]
Shab7.967e-2755.26gene:FBgn0262593 transcript:FBtr0305209[more]
Shab8.168e-2755.26gene:FBgn0262593 transcript:FBtr0333899[more]
Shab8.168e-2755.26gene:FBgn0262593 transcript:FBtr0305206[more]
Shab1.283e-2670.89gene:FBgn0262593 transcript:FBtr0305207[more]
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BLAST of kcnb vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
kcnb13.939e-2360.47potassium voltage-gated channel, Shab-related subf... [more]
kcnb14.053e-2360.47potassium voltage-gated channel, Shab-related subf... [more]
kcnb14.057e-2360.47potassium voltage-gated channel, Shab-related subf... [more]
kcnb14.057e-2360.47potassium voltage-gated channel, Shab-related subf... [more]
kcnb14.504e-2360.47potassium voltage-gated channel, Shab-related subf... [more]
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BLAST of kcnb vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
KCNB23.796e-2364.56potassium channel, voltage gated Shab related subf... [more]
KCNA56.793e-1545.38potassium channel, voltage gated shaker related su... [more]
KCNC21.360e-1439.68potassium channel, voltage gated Shaw related subf... [more]
meltf4.413e-1440.16melanotransferrin [Source:Xenbase;Acc:XB-GENE-9681... [more]
fastkd35.463e-1464.29FAST kinase domains 3 [Source:Xenbase;Acc:XB-GENE-... [more]
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BLAST of kcnb vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Kcnb29.155e-2450.00potassium voltage gated channel, Shab-related subf... [more]
Kcnb29.155e-2450.00potassium voltage gated channel, Shab-related subf... [more]
Kcnb14.836e-2360.47potassium voltage gated channel, Shab-related subf... [more]
Kcnb14.836e-2360.47potassium voltage gated channel, Shab-related subf... [more]
Kcna102.000e-1454.93potassium voltage-gated channel, shaker-related su... [more]
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BLAST of kcnb vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P17970|KCNAB_DROME1.046e-2569.62Potassium voltage-gated channel protein Shab OS=Dr... [more]
sp|Q4ZHA6|KCNB2_BOVIN6.121e-2450.85Potassium voltage-gated channel subfamily B member... [more]
sp|Q92953|KCNB2_HUMAN4.388e-2350.00Potassium voltage-gated channel subfamily B member... [more]
sp|A6H8H5|KCNB2_MOUSE6.404e-2350.00Potassium voltage-gated channel subfamily B member... [more]
sp|Q95L11|KCNB2_RABIT9.723e-2349.15Potassium voltage-gated channel subfamily B member... [more]
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BLAST of kcnb vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0A1CQL48.023e-66100.00Kcnb (Fragment) OS=Schmidtea mediterranea OX=79327... [more]
A0A448WHB55.387e-3082.05Ion_trans domain-containing protein (Fragment) OS=... [more]
A0A1B0GI562.869e-2852.10Ion_trans domain-containing protein OS=Lutzomyia l... [more]
A0A423TZA73.250e-2673.42Potassium voltage-gated channel protein Shab OS=Pe... [more]
A0A0P4WEC14.603e-2674.68Ion_trans domain-containing protein OS=Scylla oliv... [more]
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BLAST of kcnb vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
KCNB12.829e-2364.56potassium voltage-gated channel subfamily B member... [more]
kcnb12.832e-2364.56potassium voltage-gated channel subfamily B member... [more]
kcnb21.178e-2259.30potassium voltage-gated channel subfamily B member... [more]
si:dkey-192j17.11.340e-2263.29potassium voltage-gated channel subfamily B member... [more]
KCNA106.210e-1450.65potassium voltage-gated channel subfamily A member... [more]
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BLAST of kcnb vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSPMAT00000001869.15.783e-2463.29pep scaffold:Pmarinus_7.0:GL480351:152:3521:-1 gen... [more]
ENSPMAT00000006892.15.980e-2464.56pep scaffold:Pmarinus_7.0:GL486860:4567:5997:-1 ge... [more]
ENSPMAT00000005395.16.124e-2363.29pep scaffold:Pmarinus_7.0:GL482646:8602:10978:-1 g... [more]
ENSPMAT00000004235.16.458e-2364.56pep scaffold:Pmarinus_7.0:GL476413:398954:411573:-... [more]
KCNA31.364e-1458.33potassium voltage-gated channel subfamily A member... [more]
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BLAST of kcnb vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of kcnb vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO478716.556e-1864.62Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO427241.501e-1760.29Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO480632.209e-1755.07Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO468425.993e-1667.31Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
SHAK32.042e-1569.64Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of kcnb vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
kcnb15.559e-2364.56potassium voltage-gated channel subfamily B member... [more]
ENSORLT00000035166.17.088e-2363.29potassium voltage-gated channel subfamily B member... [more]
kcnb17.579e-2364.56potassium voltage-gated channel subfamily B member... [more]
si:dkey-192j17.12.081e-2263.29potassium voltage-gated channel subfamily B member... [more]
kcnb12.535e-2264.56potassium voltage-gated channel subfamily B member... [more]
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BLAST of kcnb vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000004060.16.170e-73100.00SMESG000004060.1[more]
SMESG000054120.12.171e-3162.18SMESG000054120.1[more]
SMESG000029097.12.295e-2952.80SMESG000029097.1[more]
SMESG000026885.19.440e-2969.62SMESG000026885.1[more]
SMESG000047530.12.434e-2869.62SMESG000047530.1[more]
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Cross References
External references for this transcript
DatabaseAccession
SmedGD GBrowseSMED30002315
GenBankAIX99545.1
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30002315 ID=SMED30002315|Name=kcnb|organism=Schmidtea mediterranea sexual|type=transcript|length=371bp
TTTTGGTGGGCTATAATTACAATGACAACAGTTGGCTATGGAGATATGAC
ACCAAAATCTCCTTTAGGCAAACTCATTGGATCTTTCTGTTGCATTTGTG
GAGTGTTAGTTATTGCACTGCCAATTCCAATTATCGTCAACAATTTTGCA
GAGTTTTATAAAAATGAAATCAGGCGTGAAAAGGCCTTGAAACAAAAAGA
GGAAATGGCTAAAGGTACTGAAAGTGGAAGCCTATTATTTTCTGAAATGT
ATGAAAGCAAAAAAGAAATAAATTCATTGGTTTTATCAACAATTGACAAT
TTTGTTTTAATGAAAACCAACGAAAGTGCCAACAAAACGGTGCACAGCGA
CGATCTACTCAAGGAATGAAG
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protein sequence of SMED30002315-orf-1

>SMED30002315-orf-1 ID=SMED30002315-orf-1|Name=SMED30002315-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=123bp
FWWAIITMTTVGYGDMTPKSPLGKLIGSFCCICGVLVIALPIPIIVNNFA
EFYKNEIRREKALKQKEEMAKGTESGSLLFSEMYESKKEINSLVLSTIDN
FVLMKTNESANKTVHSDDLLKE*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000025nervous system
PLANA:0000099neuron
Vocabulary: INTERPRO
TermDefinition
IPR028325VG_K_chnl
IPR003973K_chnl_volt-dep_Kv2
IPR005821Ion_trans_dom
Vocabulary: molecular function
TermDefinition
GO:0005249voltage-gated potassium channel activity
GO:0005216ion channel activity
GO:0005244voltage-gated ion channel activity
GO:0005267potassium channel activity
Vocabulary: cellular component
TermDefinition
GO:0008076voltage-gated potassium channel complex
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: biological process
TermDefinition
GO:0006813potassium ion transport
GO:0006811ion transport
GO:0055085transmembrane transport
GO:0006810transport
GO:0034765regulation of ion transmembrane transport
GO:0051260protein homooligomerization
GO:0071805potassium ion transmembrane transport
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..70
NoneNo IPR availableGENE3DG3DSA:1.10.287.70coord: 1..53
e-value: 3.4E-25
score: 90.9
NoneNo IPR availablePANTHERPTHR11537:SF134POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY B MEMBER 2coord: 1..119
NoneNo IPR availableSUPERFAMILYSSF81324Voltage-gated potassium channelscoord: 1..89
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
IPR003973Potassium channel, voltage dependent, Kv2PRINTSPR01495SHABCHANNELcoord: 50..61
score: 65.35
coord: 27..38
score: 76.75
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 1..55
e-value: 1.4E-13
score: 50.7
IPR028325Voltage-gated potassium channelPANTHERPTHR11537VOLTAGE-GATED POTASSIUM CHANNELcoord: 1..119