SMED30002306

Overview
NameSMED30002306
Smed IDSMED30002306
Length (bp)1467
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30002306 (SMED30002306) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30002306 (SMED30002306) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30002306 (SMED30002306) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30002306 (SMED30002306) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30002306

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 12

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
protonephridiaSMED30002306h1SMcG0007735 dd_Smed_v4_3404_1_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30002306h1SMcG0007735 dd_Smed_v4_3404_1_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30002306h1SMcG0007735 dd_Smed_v4_3404_1_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30002306h1SMcG0007735 dd_Smed_v4_3404_1_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30002306h1SMcG0007735 dd_Smed_v4_3404_1_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
protonephridiaSMED30002306h1SMcG0007736 dd_Smed_v4_3404_1_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30002306h1SMcG0007736 dd_Smed_v4_3404_1_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30002306h1SMcG0007736 dd_Smed_v4_3404_1_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30002306h1SMcG0007736 dd_Smed_v4_3404_1_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30002306h1SMcG0007736 dd_Smed_v4_3404_1_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cholinergic neuronSMED30002306h1SMcG0007736 dd_Smed_v6_3404_1dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cholinergic neuronSMED30002306h1SMcG0007735 dd_Smed_v6_3404_1dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30002306 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.001479:47853..51076 -7200
Homology
[Close]
BLAST of SMED30002306 vs. Ensembl Human
Match: FXR2 (FMR1 autosomal homolog 2 [Source:HGNC Symbol;Acc:HGNC:4024])

HSP 1 Score: 92.8189 bits (229), Expect = 2.801e-19
Identity = 92/422 (21.80%), Postives = 187/422 (44.31%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYED---------FSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIG-NDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D V I +E+         F D+    P D   Y +            E+  G  ++V           ++    +P  WW A ++  +GD  V+E    +AT N             +IV ++  R    +   TK       + +P+++R+  +++    + K+  G    F     NS + ++ST + P+ +A L+     +    K        E T+ LE S+ Q+ + F++EF+V   L+G A+G+  +N++   ++P V + +L ++   F I  ++      AR  LE  E+ +++ + L G ++ +N   + +I+  + + R+ V G ND +N               +  V     GTR +I   + +L++  S ++ + ++R +  +ID +L
Sbjct:   16 VEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPAD---YNK------------EITEGDEVEVY----------SRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYN-------------EIVTLERLRPVNPNPLATKGSFFKVTMAVPEDLREACSNENVHKEFKKALGANCIFLNI-TNSELFILSTTEAPVKRASLLGDMHFRSLRTKLLLMSRNEEATKHLETSK-QLAAAFQEEFTVREDLMGLAIGTHGANIQQARKVPGVTAIELGEETCTFRIYGETPEACRQARSYLEFSEDSVQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRVEGDNDKKNP------------REEGMVPFIFVGTRENISNAQALLEYHLSYLQEVEQLRLERLQIDEQL 385
[Close]
BLAST of SMED30002306 vs. Ensembl Human
Match: FXR1 (FMR1 autosomal homolog 1 [Source:HGNC Symbol;Acc:HGNC:4023])

HSP 1 Score: 90.1225 bits (222), Expect = 1.497e-18
Identity = 86/413 (20.82%), Postives = 192/413 (46.49%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + + +E+       VP +++     P+   ++S                 D +  Y ++  + +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  LE  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISE---------------GDEVEVY-SRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Human
Match: FXR1 (FMR1 autosomal homolog 1 [Source:HGNC Symbol;Acc:HGNC:4023])

HSP 1 Score: 88.9669 bits (219), Expect = 3.584e-18
Identity = 86/413 (20.82%), Postives = 192/413 (46.49%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + + +E+       VP +++     P+   ++S                 D +  Y ++  + +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  LE  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISE---------------GDEVEVY-SRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Human
Match: FXR1 (FMR1 autosomal homolog 1 [Source:HGNC Symbol;Acc:HGNC:4023])

HSP 1 Score: 85.1149 bits (209), Expect = 5.180e-17
Identity = 76/352 (21.59%), Postives = 168/352 (47.73%), Query Frame = 2 
Query:  242 AMIDVLITSDTLPYYE--AKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            A + V +      +Y+  ++  + +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  LE  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:    2 AELTVEVRGSNGAFYKVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 326
[Close]
BLAST of SMED30002306 vs. Ensembl Human
Match: FXR1 (FMR1 autosomal homolog 1 [Source:HGNC Symbol;Acc:HGNC:4023])

HSP 1 Score: 83.9593 bits (206), Expect = 1.769e-16
Identity = 73/328 (22.26%), Postives = 158/328 (48.17%), Query Frame = 2 
Query:  308 KPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  LE  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:   62 EPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 362
[Close]
BLAST of SMED30002306 vs. Ensembl Fly
Match: Fmr1 (gene:FBgn0028734 transcript:FBtr0347104)

HSP 1 Score: 74.3294 bits (181), Expect = 9.427e-14
Identity = 72/324 (22.22%), Postives = 147/324 (45.37%), Query Frame = 2 
Query:  317 AWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
             WW  I+K R+ ++  V  I              F +   +I E+   R +  +   T      F + +P+E+R+    D    + +R     V     D ++ ++V+S  +    +A ++     +  S K        E  +QLE ++   +  + +EF V   L+G A+GS  SN++    +  V + +L ++   F I  +++  ++ AR  LE  EEF ++ + L G ++ +N   + +I+  + +FR+ + G+D +++   I     H       V     GT  SI   + +L++  S+++ + ++R +  EID +L
Sbjct:   80 GWWVGIIKMRKAEIYAVAYIG-------------FETSYTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDA-LIVISKFEHTQKRASMLKDMHFRNLSQKVMLLKRTEEAARQLETTKLMSRGNYVEEFRVRDDLMGLAIGSHGSNIQAARTVDGVTNIELEEKSCTFKISGETEESVQRARAMLEYAEEFFQVPRELVGKVIGKNGRIIQEIVDKSGVFRIKIAGDDEQDQ--NIPRELAH-------VPFVFIGTVESIANAKVLLEYHLSHLKEVEQLRQEKMEIDQQL 380
[Close]
BLAST of SMED30002306 vs. Ensembl Fly
Match: Fmr1 (gene:FBgn0028734 transcript:FBtr0082198)

HSP 1 Score: 74.3294 bits (181), Expect = 9.427e-14
Identity = 72/324 (22.22%), Postives = 147/324 (45.37%), Query Frame = 2 
Query:  317 AWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
             WW  I+K R+ ++  V  I              F +   +I E+   R +  +   T      F + +P+E+R+    D    + +R     V     D ++ ++V+S  +    +A ++     +  S K        E  +QLE ++   +  + +EF V   L+G A+GS  SN++    +  V + +L ++   F I  +++  ++ AR  LE  EEF ++ + L G ++ +N   + +I+  + +FR+ + G+D +++   I     H       V     GT  SI   + +L++  S+++ + ++R +  EID +L
Sbjct:   80 GWWVGIIKMRKAEIYAVAYIG-------------FETSYTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDA-LIVISKFEHTQKRASMLKDMHFRNLSQKVMLLKRTEEAARQLETTKLMSRGNYVEEFRVRDDLMGLAIGSHGSNIQAARTVDGVTNIELEEKSCTFKISGETEESVQRARAMLEYAEEFFQVPRELVGKVIGKNGRIIQEIVDKSGVFRIKIAGDDEQDQ--NIPRELAH-------VPFVFIGTVESIANAKVLLEYHLSHLKEVEQLRQEKMEIDQQL 380
[Close]
BLAST of SMED30002306 vs. Ensembl Fly
Match: Fmr1 (gene:FBgn0028734 transcript:FBtr0082199)

HSP 1 Score: 74.3294 bits (181), Expect = 9.427e-14
Identity = 72/324 (22.22%), Postives = 147/324 (45.37%), Query Frame = 2 
Query:  317 AWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
             WW  I+K R+ ++  V  I              F +   +I E+   R +  +   T      F + +P+E+R+    D    + +R     V     D ++ ++V+S  +    +A ++     +  S K        E  +QLE ++   +  + +EF V   L+G A+GS  SN++    +  V + +L ++   F I  +++  ++ AR  LE  EEF ++ + L G ++ +N   + +I+  + +FR+ + G+D +++   I     H       V     GT  SI   + +L++  S+++ + ++R +  EID +L
Sbjct:   80 GWWVGIIKMRKAEIYAVAYIG-------------FETSYTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDA-LIVISKFEHTQKRASMLKDMHFRNLSQKVMLLKRTEEAARQLETTKLMSRGNYVEEFRVRDDLMGLAIGSHGSNIQAARTVDGVTNIELEEKSCTFKISGETEESVQRARAMLEYAEEFFQVPRELVGKVIGKNGRIIQEIVDKSGVFRIKIAGDDEQDQ--NIPRELAH-------VPFVFIGTVESIANAKVLLEYHLSHLKEVEQLRQEKMEIDQQL 380
[Close]
BLAST of SMED30002306 vs. Ensembl Fly
Match: Fmr1 (gene:FBgn0028734 transcript:FBtr0347105)

HSP 1 Score: 74.3294 bits (181), Expect = 9.427e-14
Identity = 72/324 (22.22%), Postives = 147/324 (45.37%), Query Frame = 2 
Query:  317 AWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
             WW  I+K R+ ++  V  I              F +   +I E+   R +  +   T      F + +P+E+R+    D    + +R     V     D ++ ++V+S  +    +A ++     +  S K        E  +QLE ++   +  + +EF V   L+G A+GS  SN++    +  V + +L ++   F I  +++  ++ AR  LE  EEF ++ + L G ++ +N   + +I+  + +FR+ + G+D +++   I     H       V     GT  SI   + +L++  S+++ + ++R +  EID +L
Sbjct:   80 GWWVGIIKMRKAEIYAVAYIG-------------FETSYTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDA-LIVISKFEHTQKRASMLKDMHFRNLSQKVMLLKRTEEAARQLETTKLMSRGNYVEEFRVRDDLMGLAIGSHGSNIQAARTVDGVTNIELEEKSCTFKISGETEESVQRARAMLEYAEEFFQVPRELVGKVIGKNGRIIQEIVDKSGVFRIKIAGDDEQDQ--NIPRELAH-------VPFVFIGTVESIANAKVLLEYHLSHLKEVEQLRQEKMEIDQQL 380
[Close]
BLAST of SMED30002306 vs. Ensembl Fly
Match: Fmr1 (gene:FBgn0028734 transcript:FBtr0082200)

HSP 1 Score: 73.559 bits (179), Expect = 1.532e-13
Identity = 72/324 (22.22%), Postives = 147/324 (45.37%), Query Frame = 2 
Query:  317 AWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
             WW  I+K R+ ++  V  I              F +   +I E+   R +  +   T      F + +P+E+R+    D    + +R     V     D ++ ++V+S  +    +A ++     +  S K        E  +QLE ++   +  + +EF V   L+G A+GS  SN++    +  V + +L ++   F I  +++  ++ AR  LE  EEF ++ + L G ++ +N   + +I+  + +FR+ + G+D +++   I     H       V     GT  SI   + +L++  S+++ + ++R +  EID +L
Sbjct:   42 GWWVGIIKMRKAEIYAVAYIG-------------FETSYTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDA-LIVISKFEHTQKRASMLKDMHFRNLSQKVMLLKRTEEAARQLETTKLMSRGNYVEEFRVRDDLMGLAIGSHGSNIQAARTVDGVTNIELEEKSCTFKISGETEESVQRARAMLEYAEEFFQVPRELVGKVIGKNGRIIQEIVDKSGVFRIKIAGDDEQDQ--NIPRELAH-------VPFVFIGTVESIANAKVLLEYHLSHLKEVEQLRQEKMEIDQQL 342
[Close]
BLAST of SMED30002306 vs. Ensembl Zebrafish
Match: fxr1 (fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431])

HSP 1 Score: 92.0485 bits (227), Expect = 2.367e-19
Identity = 73/327 (22.32%), Postives = 155/327 (47.40%), Query Frame = 2 
Query:  308 KPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLIC-------KKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +P  WW A ++  +GD  V+E    +AT N  +   +   + ++    +   FRC              + +P+++R     ++   + K+  G  +    S   S ++V+S  +  + +  L+        +  +   S   E T+ LE ++ Q+ S F++EF+V   L+G A+GS  SN++   ++P V + +L ++ G F I  +S   ++ AR  LE  E+ ++I + L G ++ +N   + +I+  + + R+ + G D +NK+             +  V  +  GT+ SI   + +L++  + +  + ++R +  +ID +L
Sbjct:   75 EPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNRNKAVTESTFFRC-------------SVPVPEDLRAACESEQAHKEFKKAVG-AIRIVYSPEKSELVVLSLSEATVKRVSLLSDIHLRSIRTKLMLMSRNQEATKHLESTK-QLASAFQEEFTVREDLMGLAIGSHGSNIQQARKVPGVTAIELEEETGTFRIYGESTEAVQKARNYLEFLEDSVQIPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNDNKLPR----------QEGMVPFTFVGTKESISNVQVLLEYHIAYLNEVEQLRLERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Zebrafish
Match: fxr1 (fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431])

HSP 1 Score: 91.6633 bits (226), Expect = 3.713e-19
Identity = 73/327 (22.32%), Postives = 155/327 (47.40%), Query Frame = 2 
Query:  308 KPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLIC-------KKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +P  WW A ++  +GD  V+E    +AT N  +   +   + ++    +   FRC              + +P+++R     ++   + K+  G  +    S   S ++V+S  +  + +  L+        +  +   S   E T+ LE ++ Q+ S F++EF+V   L+G A+GS  SN++   ++P V + +L ++ G F I  +S   ++ AR  LE  E+ ++I + L G ++ +N   + +I+  + + R+ + G D +NK+   +            V  +  GT+ SI   + +L++  + +  + ++R +  +ID +L
Sbjct:   72 EPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNRNKAVTESTFFRC-------------SVPVPEDLRAACESEQAHKEFKKAVG-AIRIVYSPEKSELVVLSLSEATVKRVSLLSDIHLRSIRTKLMLMSRNQEATKHLESTK-QLASAFQEEFTVREDLMGLAIGSHGSNIQQARKVPGVTAIELEEETGTFRIYGESTEAVQKARNYLEFLEDSVQIPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNDNKLPRQEGM----------VPFTFVGTKESISNVQVLLEYHIAYLNEVEQLRLERLQIDEQL 372
[Close]
BLAST of SMED30002306 vs. Ensembl Zebrafish
Match: fxr2 (fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943])

HSP 1 Score: 77.7962 bits (190), Expect = 8.341e-15
Identity = 88/428 (20.56%), Postives = 193/428 (45.09%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYED---------FSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLIC-------KKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQ--HRD----ISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + I +E+         FSD+    P D  Y+              ++  G  ++V           ++    +P  WW A ++  +G+  V+E    +AT N  + S +   +  +              +F K P     I +P+++R  C  ++ ++ D ++  G    F  +  +  ++V+ST++  + +A L+        +  +   S   E T+ LE S+ Q+ S +++E  V   L+G A+GS  +N++   ++P V + +L ++   F I  ++   ++ AR  LE  E+   + + L G ++ +N   + +I+  + + R+ + G D + K+   +   Q   RD      +  V     GT+ +I   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPTD--YHK-------------DICEGDEVEVY----------SRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPVNPNSPSA--------QNSFYKVP-----IAVPEDLRDICLTENIHK-DFRKAIGANCIFYNTSTHQ-LIVLSTNESTVKRAGLLSDMHFRSIRTKLMLMSRNEEATKHLETSK-QLASAYQEEVKVREDLMGLAIGSHGANIQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARTYLEFKEDSFPVPRNLVGKVIGKNGKIIQEIVDKSGVVRVRIEG-DNDKKLPREEGGRQGAGRDNIVSSQEGTVPFIFVGTKENISNAQALLEYHVAYLQEVEQLRLERLQIDEQL 391
[Close]
BLAST of SMED30002306 vs. Ensembl Zebrafish
Match: fxr2 (fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943])

HSP 1 Score: 76.6406 bits (187), Expect = 2.073e-14
Identity = 88/428 (20.56%), Postives = 193/428 (45.09%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYED---------FSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLIC-------KKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQ--HRD----ISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + I +E+         FSD+    P D  Y+              ++  G  ++V           ++    +P  WW A ++  +G+  V+E    +AT N  + S +   +  +              +F K P     I +P+++R  C  ++ ++ D ++  G    F  +  +  ++V+ST++  + +A L+        +  +   S   E T+ LE S+ Q+ S +++E  V   L+G A+GS  +N++   ++P V + +L ++   F I  ++   ++ AR  LE  E+   + + L G ++ +N   + +I+  + + R+ + G D + K+   +   Q   RD      +  V     GT+ +I   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPTD--YHK-------------DICEGDEVEVY----------SRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPVNPNSPSA--------QNSFYKVP-----IAVPEDLRDICLTENIHK-DFRKAIGANCIFYNTSTHQ-LIVLSTNESTVKRAGLLSDMHFRSIRTKLMLMSRNEEATKHLETSK-QLASAYQEEVKVREDLMGLAIGSHGANIQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARTYLEFKEDSFPVPRNLVGKVIGKNGKIIQEIVDKSGVVRVRIEG-DNDKKLPREEGGRQGAGRDNIVSSQEGTVPFIFVGTKENISNAQALLEYHVAYLQEVEQLRLERLQIDEQL 391
[Close]
BLAST of SMED30002306 vs. Ensembl Zebrafish
Match: fmr1 (FMRP translational regulator 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6])

HSP 1 Score: 75.485 bits (184), Expect = 4.479e-14
Identity = 86/414 (20.77%), Postives = 184/414 (44.44%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYY--AQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+A +++V    V + +E+        P  QI +   ++P  +     + E            SD +  Y ++  + +P  WW A ++  +G+  V+E    +AT N             +IV ++  R    + A TK      ++++P+++R+    D    D K+  G     T       ++++S +++   +  ++     +    K        E T+QLE SR Q+ S F ++F V   L+G A+G+  +N++   ++  V +  L ++   F I  + Q  +  AR  LE  E+ I++ + L G ++ ++   + +++  + + R+ V   + EN         +   + +  V     GT+ SI   R +L +  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGASGAFYKAYIKDVHESTVTVAFENNWQ-----PERQISFQDVRFPPPTGFQKEINE------------SDEVEVY-SRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLN-------------EIVTLERLRPVNPNKAATKNTFLKTRLDVPEDLRQMCAKDSAHKDFKKAIG-AFNVTYDSEEKQLVILSVNEVTAKRISMLSDMHFRSLRTKLALILRNEEATRQLESSR-QLASRFHEQFVVRDDLMGLAIGTHGANIQQARKISGVTTIDLDEETCTFHIYGEDQEAVRKARSYLEFSEDVIKVPRNLVGKVIGKSGKLIQEVVDKSGVVRVRV---EPEN-------DKKPSPLEEGMVPFVFVGTKESISNARILLDYHLNYLKEVDQLRMERLQIDEQL 376
[Close]
BLAST of SMED30002306 vs. Ensembl Xenopus
Match: fmr1 (fragile X mental retardation 1 [Source:NCBI gene;Acc:448049])

HSP 1 Score: 92.8189 bits (229), Expect = 1.829e-19
Identity = 102/456 (22.37%), Postives = 203/456 (44.52%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLIS--LTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNELLNDIRLHNKNRS-----------YDLTSENSNYSSLENGIED 1360
            +E++G  G  Y+A +++V  D + + +E+       +P   +   ++P  S     + E            SD +  Y ++    +P  WW A ++  +G+  V+E    +AT N             +IV I+  R    +   TK      K+++P+++R+    D    D K+  G   + +    N  ++++S +++ I +A ++     +    K        E ++QLE SR Q+ S F ++F V   L+G A+G+  +N++   ++P V +  L +    F I  + Q  ++ AR  LE  E+ I++ + L G ++ +N   + +I+  + + R+ +   + EN  N          IS ++ ++     GT+ SI     +L +  + ++ + ++R +  +ID E L  I   ++ RS           Y   SE SN S  E+   D
Sbjct:    6 VEVRGSNGAFYKAFVKDVHEDSITVTFENNWQQERQIPFHDV---RFPPPSGYNKDINE------------SDEVEVY-SRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYN-------------EIVTIERLRSVNPNKPATKNSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVG-AFSVSYDSENYQLVILSVNEVTIKRANMLSDMHFRSLRTKLSLMLRNEEASKQLESSR-QLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQEAVKKARTYLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRI---EAENDKN----------ISPEEGMVPFVFVGTKDSITNATVLLDYHLNYLKEVDQLRLERLQID-EQLRQIGASSRGRSRRGTGYASGKIYSTNSEASNASETESDHRD 416
[Close]
BLAST of SMED30002306 vs. Ensembl Xenopus
Match: fmr1 (fragile X mental retardation 1 [Source:NCBI gene;Acc:448049])

HSP 1 Score: 88.5817 bits (218), Expect = 3.753e-18
Identity = 90/414 (21.74%), Postives = 189/414 (45.65%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLIS--LTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+A +++V  D + + +E+       +P   +   ++P  S     + E            SD +  Y ++    +P  WW A ++  +G+  V+E    +AT N             +IV I+  R    +   TK      K+++P+++R+    D    D K+  G   + +    N  ++++S +++ I +A ++     +    K        E ++QLE SR Q+ S F ++F V   L+G A+G+  +N++   ++P V +  L +    F I  + Q  ++ AR  LE  E+ I++ + L G ++ +N   + +I+  + + R+ +   + EN  N          IS ++ ++     GT+ SI     +L +  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKAFVKDVHEDSITVTFENNWQQERQIPFHDV---RFPPPSGYNKDINE------------SDEVEVY-SRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYN-------------EIVTIERLRSVNPNKPATKNSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVG-AFSVSYDSENYQLVILSVNEVTIKRANMLSDMHFRSLRTKLSLMLRNEEASKQLESSR-QLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQEAVKKARTYLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRI---EAENDKN----------ISPEEGMVPFVFVGTKDSITNATVLLDYHLNYLKEVDQLRLERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Xenopus
Match: fmr1 (fragile X mental retardation 1 [Source:NCBI gene;Acc:448049])

HSP 1 Score: 88.1965 bits (217), Expect = 4.282e-18
Identity = 90/414 (21.74%), Postives = 189/414 (45.65%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLIS--LTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+A +++V  D + + +E+       +P   +   ++P  S     + E            SD +  Y ++    +P  WW A ++  +G+  V+E    +AT N             +IV I+  R    +   TK      K+++P+++R+    D    D K+  G   + +    N  ++++S +++ I +A ++     +    K        E ++QLE SR Q+ S F ++F V   L+G A+G+  +N++   ++P V +  L +    F I  + Q  ++ AR  LE  E+ I++ + L G ++ +N   + +I+  + + R+ +   + EN  N          IS ++ ++     GT+ SI     +L +  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKAFVKDVHEDSITVTFENNWQQERQIPFHDV---RFPPPSGYNKDINE------------SDEVEVY-SRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYN-------------EIVTIERLRSVNPNKPATKNSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVG-AFSVSYDSENYQLVILSVNEVTIKRANMLSDMHFRSLRTKLSLMLRNEEASKQLESSR-QLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQEAVKKARTYLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRI---EAENDKN----------ISPEEGMVPFVFVGTKDSITNATVLLDYHLNYLKEVDQLRLERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Xenopus
Match: fmr1 (fragile X mental retardation 1 [Source:NCBI gene;Acc:448049])

HSP 1 Score: 88.1965 bits (217), Expect = 6.125e-18
Identity = 90/414 (21.74%), Postives = 189/414 (45.65%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLIS--LTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+A +++V  D + + +E+       +P   +   ++P  S     + E            SD +  Y ++    +P  WW A ++  +G+  V+E    +AT N             +IV I+  R    +   TK      K+++P+++R+    D    D K+  G   + +    N  ++++S +++ I +A ++     +    K        E ++QLE SR Q+ S F ++F V   L+G A+G+  +N++   ++P V +  L +    F I  + Q  ++ AR  LE  E+ I++ + L G ++ +N   + +I+  + + R+ +   + EN  N          IS ++ ++     GT+ SI     +L +  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKAFVKDVHEDSITVTFENNWQQERQIPFHDV---RFPPPSGYNKDINE------------SDEVEVY-SRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYN-------------EIVTIERLRSVNPNKPATKNSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVG-AFSVSYDSENYQLVILSVNEVTIKRANMLSDMHFRSLRTKLSLMLRNEEASKQLESSR-QLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQEAVKKARTYLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRI---EAENDKN----------ISPEEGMVPFVFVGTKDSITNATVLLDYHLNYLKEVDQLRLERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Xenopus
Match: fmr1 (fragile X mental retardation 1 [Source:NCBI gene;Acc:448049])

HSP 1 Score: 88.1965 bits (217), Expect = 6.145e-18
Identity = 90/414 (21.74%), Postives = 189/414 (45.65%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLIS--LTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+A +++V  D + + +E+       +P   +   ++P  S     + E            SD +  Y ++    +P  WW A ++  +G+  V+E    +AT N             +IV I+  R    +   TK      K+++P+++R+    D    D K+  G   + +    N  ++++S +++ I +A ++     +    K        E ++QLE SR Q+ S F ++F V   L+G A+G+  +N++   ++P V +  L +    F I  + Q  ++ AR  LE  E+ I++ + L G ++ +N   + +I+  + + R+ +   + EN  N          IS ++ ++     GT+ SI     +L +  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKAFVKDVHEDSITVTFENNWQQERQIPFHDV---RFPPPSGYNKDINE------------SDEVEVY-SRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYN-------------EIVTIERLRSVNPNKPATKNSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVG-AFSVSYDSENYQLVILSVNEVTIKRANMLSDMHFRSLRTKLSLMLRNEEASKQLESSR-QLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQEAVKKARTYLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRI---EAENDKN----------ISPEEGMVPFVFVGTKDSITNATVLLDYHLNYLKEVDQLRLERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Mouse
Match: Fxr2 (fragile X mental retardation, autosomal homolog 2 [Source:MGI Symbol;Acc:MGI:1346074])

HSP 1 Score: 93.9745 bits (232), Expect = 6.712e-20
Identity = 93/422 (22.04%), Postives = 187/422 (44.31%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYED---------FSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIG-NDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D V I +E+         F D+    P D   Y +            E+  G  ++V           ++    +P  WW A ++  +GD  V+E    +AT N             +IV ++  R    S   TK       + +P+++R+  +++    + K+  G    F     NS + ++ST + P+ +A L+     +    K        E T+ LE S+ Q+ + F++EF+V   L+G A+G+  +N++   ++P V + +L ++   F I  ++      AR  LE  E+ +++ + L G ++ +N   + +I+  + + R+ V G ND +N               +  V     GTR +I   + +L++  S ++ + ++R +  +ID +L
Sbjct:   16 VEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPAD---YNK------------EITEGDEVEVY----------SRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYN-------------EIVTLERLRPVNPSPLATKGSFFKVTMAVPEDLREACSNENVHKEFKKALGANCIFLNI-TNSELFILSTTEAPVKRASLLGDMHFRSLRTKLLLMSRNEEATKHLETSK-QLAAAFQEEFTVREDLMGLAIGTHGANIQQARKVPGVTAIELGEETCTFRIYGETPEACRQARSYLEFSEDSVQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRVEGDNDKKNPRE------------EGMVPFIFVGTRENISNAQALLEYHLSYLQEVEQLRLERLQIDEQL 385
[Close]
BLAST of SMED30002306 vs. Ensembl Mouse
Match: Fxr1 (fragile X mental retardation gene 1, autosomal homolog [Source:MGI Symbol;Acc:MGI:104860])

HSP 1 Score: 90.1225 bits (222), Expect = 8.984e-19
Identity = 86/413 (20.82%), Postives = 192/413 (46.49%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + + +E+       VP +++     P+   ++S                 D +  Y ++  + +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  LE  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISE---------------GDEVEVY-SRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Mouse
Match: Fxr1 (fragile X mental retardation gene 1, autosomal homolog [Source:MGI Symbol;Acc:MGI:104860])

HSP 1 Score: 89.7373 bits (221), Expect = 1.505e-18
Identity = 86/413 (20.82%), Postives = 192/413 (46.49%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + + +E+       VP +++     P+   ++S                 D +  Y ++  + +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  LE  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISE---------------GDEVEVY-SRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Mouse
Match: Fxr1 (fragile X mental retardation gene 1, autosomal homolog [Source:MGI Symbol;Acc:MGI:104860])

HSP 1 Score: 89.3521 bits (220), Expect = 2.077e-18
Identity = 86/413 (20.82%), Postives = 192/413 (46.49%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + + +E+       VP +++     P+   ++S                 D +  Y ++  + +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  LE  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISE---------------GDEVEVY-SRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Mouse
Match: Fxr1 (fragile X mental retardation gene 1, autosomal homolog [Source:MGI Symbol;Acc:MGI:104860])

HSP 1 Score: 87.8113 bits (216), Expect = 6.400e-18
Identity = 86/413 (20.82%), Postives = 192/413 (46.49%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + + +E+       VP +++     P+   ++S                 D +  Y ++  + +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  LE  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISE---------------GDEVEVY-SRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. UniProt/SwissProt
Match: sp|Q2KHP9|FMR1B_XENLA (Synaptic functional regulator FMR1 OS=Xenopus laevis OX=8355 GN=fmr1-b PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.070e-19
Identity = 91/412 (22.09%), Postives = 187/412 (45.39%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+A +++V  D + + +E+       +P   +   ++P  S     + E            SD +  Y ++    +P  WW A ++  +G+  V+E    +AT N             +IV ID  R    + + TK      K+++P+++R+    D    D K+  G   + +    N  ++++S +++ I +A ++C    +    K        E ++QLE SR Q+ S F ++F V   L+G A+G+  +N++   ++P V +  L +    F I  + Q  ++ AR  LE  E+ I++ + L G ++ +N   + +I+  + + R+ +   + EN  N            +  V     GT+ SI     +L +  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKAFVKDVHEDSITVTFENNWQQEKQIPFHDV---RFPPPSGYNKDINE------------SDEVEVY-SRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYN-------------EIVTIDRLRSVNPNKSATKNSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVG-AFSVSYDSENYQLVILSVNEVTIKRANMLCDMHFRSLRTKLSLMLRNEEASKQLESSR-QLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQEAVKKARTYLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRI---EAENDKNISQ--------EEGNVPFVFVGTKDSITNATVLLDYHLNYLKEVDQLRLERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. UniProt/SwissProt
Match: sp|P51116|FXR2_HUMAN (Fragile X mental retardation syndrome-related protein 2 OS=Homo sapiens OX=9606 GN=FXR2 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.345e-18
Identity = 92/422 (21.80%), Postives = 187/422 (44.31%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYED---------FSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIG-NDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D V I +E+         F D+    P D   Y +            E+  G  ++V           ++    +P  WW A ++  +GD  V+E    +AT N             +IV ++  R    +   TK       + +P+++R+  +++    + K+  G    F     NS + ++ST + P+ +A L+     +    K        E T+ LE S+ Q+ + F++EF+V   L+G A+G+  +N++   ++P V + +L ++   F I  ++      AR  LE  E+ +++ + L G ++ +N   + +I+  + + R+ V G ND +N               +  V     GTR +I   + +L++  S ++ + ++R +  +ID +L
Sbjct:   16 VEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPAD---YNK------------EITEGDEVEVY----------SRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYN-------------EIVTLERLRPVNPNPLATKGSFFKVTMAVPEDLREACSNENVHKEFKKALGANCIFLNI-TNSELFILSTTEAPVKRASLLGDMHFRSLRTKLLLMSRNEEATKHLETSK-QLAAAFQEEFTVREDLMGLAIGTHGANIQQARKVPGVTAIELGEETCTFRIYGETPEACRQARSYLEFSEDSVQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRVEGDNDKKNP------------REEGMVPFIFVGTRENISNAQALLEYHLSYLQEVEQLRLERLQIDEQL 385
[Close]
BLAST of SMED30002306 vs. UniProt/SwissProt
Match: sp|P51114|FXR1_HUMAN (Fragile X mental retardation syndrome-related protein 1 OS=Homo sapiens OX=9606 GN=FXR1 PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 1.721e-17
Identity = 86/413 (20.82%), Postives = 192/413 (46.49%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + + +E+       VP +++     P+   ++S                 D +  Y ++  + +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  LE  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISE---------------GDEVEVY-SRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. UniProt/SwissProt
Match: sp|Q5XI81|FXR1_RAT (Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.722e-17
Identity = 86/413 (20.82%), Postives = 192/413 (46.49%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + + +E+       VP +++     P+   ++S                 D +  Y ++  + +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  LE  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKVFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISE---------------GDEVEVY-SRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. UniProt/SwissProt
Match: sp|O70523|FXR1_CRIGR (Fragile X mental retardation syndrome-related protein 1 OS=Cricetulus griseus OX=10029 GN=FXR1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.094e-17
Identity = 87/419 (20.76%), Postives = 195/419 (46.54%), Query Frame = 2 
Query:   35 MYDIKDIEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            M D+  +E++G  G  Y+  +++V  D + + +E+       VP +++     P+   ++S                 D +  Y ++  + +P  WW A ++  +G+  V+E    +AT N  +   +   + Q+        F+C              +++P+++R+ C N++ ++ D K+  G    F   +  + ++++S  +  + +  ++    ++         S   E T+ LE ++ Q+ + F +EF V   L+G A+G+  SN++   ++P V + +L +  G F I  +S   ++ AR  +E  E+FI++ + L G ++ +N   + +I+  + + R+ + G D ENK+             D  V     GT+ SI   + +L++  + ++ + ++R +  +ID +L
Sbjct:    1 MADVT-VEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISE---------------GDEVEVY-SRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC-------------TVDVPEDLREACANENAHK-DFKKAVGACRIFYHPET-TQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTK-QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESAEAVKKARGFMEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNENKLPR----------EDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. TrEMBL
Match: V5I4G3 (Putative fragile x mental retardation syndrome-related protein 1 log b (Fragment) OS=Ixodes ricinus OX=34613 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 7.874e-21
Identity = 93/416 (22.36%), Postives = 195/416 (46.88%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNELLNDI 1279
            +E++GE G  Y+A + +V  + + + +E+        P  +I     P +  +    PE+  G  ++V           +K  + +   WW A++K  +GD  VVE    +             +   +IV  D  R +  +   TK     F++E+P+++R+   DD    + K+  G  V    +  N  ++V++  +    +A+++ + + +    K        E  +QLE +R    S F +EFSV   L+G A+G+  +N++N  +L  V   +L++    F I  +++  ++ AR  LE  EE I++ + L G ++ +N   + +++  + + R+ + G+      N  ++  +  D+S  +V     GT  SI   R +L++  ++++ + ++R +  EID +L + +
Sbjct:    6 VEVRGENGAHYKAFVIDVHDNDISVAFENDWQPPNKFPFQRIRLPSTPCKDGEK---PEITEGQEVEVF----------SKANDQEASGWWEAMVKMTKGDFHVVEYQGWD-------------TAYSEIVPGDRLRPKNTNPPITKSTFTKFELEVPEDLREYSKDDSAHKEFKKAIGAAVVRYITSKNC-LMVIARSEAAKKRAEMMSEIYYRNLRQKLILLSKTEEAARQLESTRLHSSSGFVEEFSVREDLMGLAIGAHGANIQNARKLDGVTGIELVESSCTFKIFGETEESVKKARGLLEYAEESIQVPRILVGKVIGKNGRVIQEMVDKSGVVRVKIEGD------NENETPREETDLS-LQVPFVFVGTVESISNARILLEYHLAHLKEVEKLRQEKLEIDQQLRSQL 387
[Close]
BLAST of SMED30002306 vs. TrEMBL
Match: A0A4Z2D1Q4 (Fragile X mental retardation syndrome-related protein isoform 3 OS=Schistosoma japonicum OX=6182 GN=EWB00_005382 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.013e-20
Identity = 115/447 (25.73%), Postives = 199/447 (44.52%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIG-DFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQM-----STLPELIAGAMIDVLITS----DTLPY-YEAKIENVKPKAWWPAILKKRQGDLLVVELI------NLNATDNVDIKSNKFVSL-------RQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFT-------------KSDNNSY-----ILVMSTDDIPIHKAKLICKKWVQQWSDKYELTQQLE-------GSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLIS--LTGTRLSIEKTREILQFASSNVEHILEIR 1237
            +E++G+YGE Y   +  +   + + +   D ++   +V          P  S ++      T+ E + G  +DVL +S     TL +     +   K  AWWPA+++K  G  ++VEL+      N N+++ V +  NK +S+       + DIVE    R R      +        I+IPDE+   C     Y     R CG PV  T             K DN +Y     +LV+STD   I++A +I   +V     K  + QQ E        SR   QS F +EF +   L+ +A+G+  SN++  S +  ++S +L  Q G   I  K+Q  ++ A++ L+  ++  +I K   G +L         + H+ D  R+ ++G  I             +   DD+  +S  LTGT+ +I  T+  L+F  ++++ +  +R
Sbjct:   10 VEVEGKYGEFYPGVINGLKSLEELNVTLLDSANSKALVEF------TLPPSSLRLPPKDSGTILEPVQGQEVDVLFSSFSGEPTLDHGLSGDVIASKLSAWWPAVVRKIGGSFVIVELVANFSVENSNSSE-VTVLPNKRISVPHPSSLEKTDIVEKHQLRPRIHHPNLSTSSFHMHAIDIPDELAPYCREPANYH-HFARRCGLPVLITLAPDTLKPLSPVIKGDNETYNLKSRLLVISTDISTINRASVIDNTFVDMLRQKVSILQQTEELSKKLVASRLNQQSPFVEEFLIPLDLIHYAIGAQGSNIRRASAIEGILSVKLDRQTGNIKISGKTQDAVKNAKKLLDFSQDIFQIPKSYVGPILGSGR---RHVQHIVD--RVGLVGIKIS------------KSPEDDREHVSFQLTGTQQAIRDTQLFLEFQVASLQELDRLR 431
[Close]
BLAST of SMED30002306 vs. TrEMBL
Match: A0A4Z2D1Q5 (Fragile X mental retardation syndrome-related protein isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_005382 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.384e-20
Identity = 115/447 (25.73%), Postives = 199/447 (44.52%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIG-DFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQM-----STLPELIAGAMIDVLITS----DTLPY-YEAKIENVKPKAWWPAILKKRQGDLLVVELI------NLNATDNVDIKSNKFVSL-------RQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFT-------------KSDNNSY-----ILVMSTDDIPIHKAKLICKKWVQQWSDKYELTQQLE-------GSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLIS--LTGTRLSIEKTREILQFASSNVEHILEIR 1237
            +E++G+YGE Y   +  +   + + +   D ++   +V          P  S ++      T+ E + G  +DVL +S     TL +     +   K  AWWPA+++K  G  ++VEL+      N N+++ V +  NK +S+       + DIVE    R R      +        I+IPDE+   C     Y     R CG PV  T             K DN +Y     +LV+STD   I++A +I   +V     K  + QQ E        SR   QS F +EF +   L+ +A+G+  SN++  S +  ++S +L  Q G   I  K+Q  ++ A++ L+  ++  +I K   G +L         + H+ D  R+ ++G  I             +   DD+  +S  LTGT+ +I  T+  L+F  ++++ +  +R
Sbjct:   10 VEVEGKYGEFYPGVINGLKSLEELNVTLLDSANSKALVEF------TLPPSSLRLPPKDSGTILEPVQGQEVDVLFSSFSGEPTLDHGLSGDVIASKLSAWWPAVVRKIGGSFVIVELVANFSVENSNSSE-VTVLPNKRISVPHPSSLEKTDIVEKHQLRPRIHHPNLSTSSFHMHAIDIPDELAPYCREPANYH-HFARRCGLPVLITLAPDTLKPLSPVIKGDNETYNLKSRLLVISTDISTINRASVIDNTFVDMLRQKVSILQQTEELSKKLVASRLNQQSPFVEEFLIPLDLIHYAIGAQGSNIRRASAIEGILSVKLDRQTGNIKISGKTQDAVKNAKKLLDFSQDIFQIPKSYVGPILGSGR---RHVQHIVD--RVGLVGIKIS------------KSPEDDREHVSFQLTGTQQAIRDTQLFLEFQVASLQELDRLR 431
[Close]
BLAST of SMED30002306 vs. TrEMBL
Match: A0A183R7U1 (Agenet-like domain-containing protein OS=Schistosoma rodhaini OX=6188 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-20
Identity = 115/434 (26.50%), Postives = 195/434 (44.93%), Query Frame = 2 
Query:  215 STLPELIAGAMIDVLITSDTLPYYEAKIENVKPK--------AWWPAILKKRQGDLLVVELI----NLNATDN-VDIKSNKFVSL-------RQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFT-------------KSDNNSY-----ILVMSTDDIPIHKAKLICKKWVQQWSDKYELTQQLE-------GSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLIS--LTGTRLSIEKTREILQFASSNVEHILEIR-----PQLAEIDNEL--LNDIRLHNKNRSYDLTSENSNYSSLENG 1351
             T+ E + G  +DVLI+S      E  +++ +P         AWWPA+++K  G  ++VEL+    + NA  N V +  NK +S+       + DIVE    R R      +        I+IPDE+   C     Y     R CG PV  T             K D+ +Y     +LV+STD   I++A +I   +V     K  + QQ E        SR   QS F +EF +   L+ +A+G+  SN++  S +  V+S +L  Q G   I  K+Q  ++ A++ L+  ++  +I K   G +L      +  I+      R+ ++G  I             +   DD+  +S  LTGT+ +I  T+  L+F  ++++ +  +R     P + +  N    L DI  ++++ ++   SEN +   + NG
Sbjct:   89 GTVLEPVQGLEVDVLISSSP---GEPPVDHEQPSDAIASKLSAWWPAVVRKIGGSFVIVELMADFSSENAGPNEVTVLPNKRISVPHPSSLEKTDIVEKHQLRPRVHHPNLSVSSFHIHAIDIPDELAPYCKEPANYH-HFARRCGLPVLITLAPDTFKPVSPVIKGDSETYNLKSRLLVISTDVSTINRASVIDNTFVDMLRQKVSILQQTEELSKKLVASRLNQQSPFVEEFLIPLDLIHYAIGAQGSNIRRASAIEGVLSVKLDRQTGNIRISGKTQDAVKNAKKLLDFSQDIFQIPKSYVGPILGSGRRHVQHIVD-----RVGLVGIKIS------------KSPEDDREHVSFQLTGTQQAIRDTQLFLEFQVASLQELDRLRGVENPPSILKPKNATIPLEDISSNDESSNHFTHSENGHR--ISNG 499
[Close]
BLAST of SMED30002306 vs. TrEMBL
Match: A0A4Z2D1N8 (Fragile X mental retardation syndrome-related protein isoform 5 OS=Schistosoma japonicum OX=6182 GN=EWB00_005382 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.434e-19
Identity = 104/387 (26.87%), Postives = 174/387 (44.96%), Query Frame = 2 
Query:  215 STLPELIAGAMIDVLITS----DTLPY-YEAKIENVKPKAWWPAILKKRQGDLLVVELI------NLNATDNVDIKSNKFVSL-------RQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFT-------------KSDNNSY-----ILVMSTDDIPIHKAKLICKKWVQQWSDKYELTQQLE-------GSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLIS--LTGTRLSIEKTREILQFASSNVEHILEIR 1237
             T+ E + G  +DVL +S     TL +     +   K  AWWPA+++K  G  ++VEL+      N N+++ V +  NK +S+       + DIVE    R R      +        I+IPDE+   C     Y     R CG PV  T             K DN +Y     +LV+STD   I++A +I   +V     K  + QQ E        SR   QS F +EF +   L+ +A+G+  SN++  S +  ++S +L  Q G   I  K+Q  ++ A++ L+  ++  +I K   G +L      +  I+      R+ ++G  I             +   DD+  +S  LTGT+ +I  T+  L+F  ++++ +  +R
Sbjct:   64 GTILEPVQGQEVDVLFSSFSGEPTLDHGLSGDVIASKLSAWWPAVVRKIGGSFVIVELVANFSVENSNSSE-VTVLPNKRISVPHPSSLEKTDIVEKHQLRPRIHHPNLSTSSFHMHAIDIPDELAPYCREPANYH-HFARRCGLPVLITLAPDTLKPLSPVIKGDNETYNLKSRLLVISTDISTINRASVIDNTFVDMLRQKVSILQQTEELSKKLVASRLNQQSPFVEEFLIPLDLIHYAIGAQGSNIRRASAIEGILSVKLDRQTGNIKISGKTQDAVKNAKKLLDFSQDIFQIPKSYVGPILGSGRRHVQHIVD-----RVGLVGIKIS------------KSPEDDREHVSFQLTGTQQAIRDTQLFLEFQVASLQELDRLR 431
[Close]
BLAST of SMED30002306 vs. Ensembl Cavefish
Match: fxr1 (FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:103041511])

HSP 1 Score: 93.5893 bits (231), Expect = 6.590e-20
Identity = 91/422 (21.56%), Postives = 190/422 (45.02%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYED---------FSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDP-VTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + I +E+         FSD+    P D                  E+  GA +++           ++    +P  WW A ++  +GD  V+E    +AT N             +IV  +  R    + A TK       + +PD+++    ++    D K+  G   + ++    N  ++++S  +  + +  L+    ++    K        E T+ LE ++ Q+ S F++EF+V   L+G A+GS  SN++   ++P V + +L ++ G F +  +++  ++ AR  LE  EE ++I + L G ++ +N   + +I+  + + R+ + G D +NK+   +            V  +  GT+ SI   + +L++  S +  + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAYYKGFVKDVHDDSLSISFENNWQPERQVPFSDVRLPPPAD---------------GKKEIGEGAEVEIY----------SRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYN-------------EIVTFERLRPVNLNKAVTKNTFHKCTVPVPDDLKDACTNENAHKDFKKAIGASRIVYSPETGN--LVILSVCESTVKRVSLLSDMHLRSIRTKLMLMYRNEEATKHLESTK-QLASAFQEEFTVREDLVGLAIGSHGSNIQQARKVPGVTAIELDEESGTFRVYGETEEAVKKARNYLEFLEESVQIPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNDNKLPRQEGM----------VPFTFVGTKESIGNVQVLLEYHISYLNEVEQLRLERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Cavefish
Match: fxr1 (FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:103041511])

HSP 1 Score: 93.2041 bits (230), Expect = 8.812e-20
Identity = 91/422 (21.56%), Postives = 190/422 (45.02%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYED---------FSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDP-VTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + I +E+         FSD+    P D                  E+  GA +++           ++    +P  WW A ++  +GD  V+E    +AT N             +IV  +  R    + A TK       + +PD+++    ++    D K+  G   + ++    N  ++++S  +  + +  L+    ++    K        E T+ LE ++ Q+ S F++EF+V   L+G A+GS  SN++   ++P V + +L ++ G F +  +++  ++ AR  LE  EE ++I + L G ++ +N   + +I+  + + R+ + G D +NK+   +            V  +  GT+ SI   + +L++  S +  + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAYYKGFVKDVHDDSLSISFENNWQPERQVPFSDVRLPPPAD---------------GKKEIGEGAEVEIY----------SRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYN-------------EIVTFERLRPVNLNKAVTKNTFHKCTVPVPDDLKDACTNENAHKDFKKAIGASRIVYSPETGN--LVILSVCESTVKRVSLLSDMHLRSIRTKLMLMYRNEEATKHLESTK-QLASAFQEEFTVREDLVGLAIGSHGSNIQQARKVPGVTAIELDEESGTFRVYGETEEAVKKARNYLEFLEESVQIPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNDNKLPRQEGM----------VPFTFVGTKESIGNVQVLLEYHISYLNEVEQLRLERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Cavefish
Match: fmr1 (FMRP translational regulator 1 [Source:NCBI gene;Acc:103032165])

HSP 1 Score: 82.0333 bits (201), Expect = 3.553e-16
Identity = 90/441 (20.41%), Postives = 193/441 (43.76%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNELLNDIRLHNKNRSYDLTSENSNYSSLENGI 1354
            +E++G  G  Y+A +++V  + V + +E+       +P   + +             P  + G   ++  + D   Y  A   + +P  WW A ++  +G+  V+E    +AT N             +IV +D  R    + A  K      ++++P+++R+    +    D K+  G     T       ++++S +++   +A ++     +    K        E ++QLE SR Q+ S F ++F V   L+G A+G+  +N++   ++P V +  L ++   F I  + Q  +  AR  LE  E+ I++ + L G ++ ++   + +++  + + R+ V   + EN   T         + +  V     GT+ SI   R +L +  + ++ + ++R +  +ID +L    ++    R+     E     S +NG+
Sbjct:    6 VEVRGASGAFYKALIKDVHENTVTVAFENNWQPERQIPFHDVRF-------------PPPV-GVQKEISESDDVEVYSRAN--DKEPCGWWAAKVRMVKGEFYVIEYAACDATLN-------------EIVTLDRLRPVNPNKAAAKNTFLKIRLDVPEDLRQMCAKESAHKDFKKAIG-AFNVTYDSEKKQLVILSVNEVTTKRATMLTDMHFRSLRTKLALILRNEEASRQLESSR-QLASRFHEQFVVRDDLMGLAIGTHGANIQQARKVPGVTNIDLDEETCTFHIYGEDQEAVRKARSYLEFSEDIIKVPRNLVGKVIGKSGKLIQEVVDKSGVVRVRV---EPENDKKTP-------PLEEGMVPFVFVGTKESISNARILLDYHLNYLKEVDQLRMERLQIDEQLR---QIGGGPRAPPGRPEKEKPFSADNGM 402
[Close]
BLAST of SMED30002306 vs. Ensembl Cavefish
Match: fxr2 (fragile X mental retardation syndrome-related protein 1 [Source:NCBI gene;Acc:103038564])

HSP 1 Score: 72.0182 bits (175), Expect = 5.397e-13
Identity = 85/428 (19.86%), Postives = 192/428 (44.86%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYED---------FSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLIC-------KKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISD------DKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + I +E+         FSD+    P D   Y +            ++  G  ++V           ++    +P  WW A ++  +G+  V+E    +AT N             +IV  +  R    +   ++       + +P+++R+ C  ++ ++ D ++  G    F  +     ++V+ST +  + +A L+        +  +   S   E T+ LE S+ Q+ S +++E  V   L+G A+GS  +N++   ++P V + +L ++   F I  ++   ++ AR  LE  E+   + + L G ++ ++   + +I+  + + R+ + G D + K+   +  +Q  D +D        V     GT+ +I   + +L++  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFVKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPSD---YNK------------DIGEGEEVEVY----------SRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYN-------------EIVTAERIRPVNPNSPASRNTFYKVNVAVPEDLREICLTENIHK-DFRKAIGASCIFYNASIQE-LVVLSTTESTVKRAGLLSDMHFRSIRTKLMLMSRNEEATKHLETSK-QLASAYQEEVRVREDLMGLAIGSHGANIQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARVYLEFKEDSFPVPRNLVGKVIGKSGKIIQEIVDKSGVVRVRIEG-DNDKKLPREEVGWQASDSADTVDGQEGMVPFIFVGTKENISNAQALLEYHVAYLQEVEQLRLERLQIDEQL 391
[Close]
BLAST of SMED30002306 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003147.1 (pep scaffold:Pmarinus_7.0:GL476998:149341:183802:-1 gene:ENSPMAG00000002849.1 transcript:ENSPMAT00000003147.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 97.8265 bits (242), Expect = 5.781e-22
Identity = 92/413 (22.28%), Postives = 191/413 (46.25%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCG-DPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDK-------YELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+A ++++  D + + +E+       +P   +     P+   +              V+   D +  +    EN +P  WW A ++  +G+  V+E    +AT N             +IV ++  R    +    K   + F I +P+++R+   D+    D K+  G + V F     +S ++VMST +  + +A L+     +    K        E T+QLE +R Q+ + F +EFSV   L+G A+G+  +N++   ++P V + +L ++ G F I  ++   +  AR  LE  E+ +++ +   G ++ +N   + +I+  + + R+ + G+D          T +H    +  V  +  GT+ ++   R +L++  S ++ + E+R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKAFVKDIHEDSLTVTFENSWQPERQIPFQDVRLPP-PDDCGK--------------VITEGDEVEVFSRANEN-EPCGWWLARVRMMKGEFYVIEYAACDATYN-------------EIVTVERLRPVNPNKPVGKNSFRKFSIPVPEDLRQACVDEATHRDFKKAIGANSVVFDT--ESSSLVVMSTCESTVKRASLLSDMHFRSIRTKLLLLARNQEATKQLETTR-QLAAAFREEFSVRDDLIGLAIGAHGANIQAARRVPGVSAIELDEEGGAFRIFGETPEAVRQARSMLEFTEDSVQVPRLFVGKVIGKNGKAIQEIVDKSGVVRVKIEGDD----------TKKH-TREEGMVPFTFVGTKENLSNARVLLEYHLSYLKEVEELRMERLQIDEQL 375
[Close]
BLAST of SMED30002306 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008476.1 (pep scaffold:Pmarinus_7.0:GL476831:2357:16482:1 gene:ENSPMAG00000007610.1 transcript:ENSPMAT00000008476.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 88.5817 bits (218), Expect = 6.504e-19
Identity = 67/264 (25.38%), Postives = 130/264 (49.24%), Query Frame = 2 
Query:  308 KPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSD-NNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGND 1075
            +P  WW A ++  +G+  V+E    +AT N             +IV I+  R    + A  K     F I +P++++     D    D K+  G   T  + D  NS ++V+ST D  + +A L+     +    K        E T+QLE ++ Q+QS F +EFSV  +L+G A+G+  +N++   ++P V + +L +    F I  ++   ++ AR  LE  E+ +++ + L G ++ ++   + +I+  + + R+ + G++
Sbjct:   61 EPCGWWLARVRMMKGEFYVIEYAACDATYN-------------EIVTIERLRPTNPNKAIGKNAFHKFSIPVPEDLKPHCASDAVHRDFKKAIG--ATSIQFDAENSRLVVVSTSDTTVKRAGLLSDMHFRSIRTKLLLRTRNEEATKQLENTK-QLQSGFHEEFSVRPELMGLAIGTHGANIQQARKVPGVTAIELDEDTSTFRIYGETAEAVKAARSFLEFMEKPMQVPRDLVGKVIGKSGKVIQEIVDKSGVVRVRIEGDN 308
[Close]
BLAST of SMED30002306 vs. Ensembl Nematostella
Match: EDO44731 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUN8])

HSP 1 Score: 69.707 bits (169), Expect = 1.186e-12
Identity = 68/336 (20.24%), Postives = 162/336 (48.21%), Query Frame = 2 
Query:  293 KIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLI---------CKKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNELLN 1273
            + ++ +P  WW A +  ++G+  V++    +AT N             +IV  +  R    + + ++       I++P +++    D+    + K+   +      ++N + ++V+S  ++P+ +A ++          K  +Q WSD  E  +QLE ++ QM  +  +   +   L+G A+G+  +N++   +LP V+S ++ ++   F+I  +++  +  AR  LE  EE + + K L G ++ +N   +  I+  + + R+ +   D EN+  T +     +++S         GT+  I+  R +L +  ++++ + +++ +   +D++L N
Sbjct:   70 RADDNEPCGWWLAKIIHKKGEFFVIQYSGWDATFN-------------EIVPRERIRPPNTNGSISRQMYYKVMIDVPPDLKNICKDENTHREFKKQV-NAACVGYNENLNVLVVLSRSELPVKRAAMLSEIHFRSLRTKMLLQSWSD--ETARQLELAKKQMGVL--ERLKLPEHLMGLAIGAQGANIQQARKLPGVMSIEVDEENCTFNICGENERAVLEARRLLEYAEETVYVPKPLVGKVIGKNGRIIQDIVDRSGVTRVKIEPPD-ENQ--TPEEKQAKKEVS-----FLFVGTKECIDNCRMMLDYHVAHLKEVEQMKREKESLDHQLQN 379
[Close]
BLAST of SMED30002306 vs. Ensembl Medaka
Match: fxr1 (FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:101162746])

HSP 1 Score: 92.4337 bits (228), Expect = 1.842e-19
Identity = 92/428 (21.50%), Postives = 190/428 (44.39%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYED---------FSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDK-------YELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNELLNDIRLH 1288
            +E++G  G  Y+  ++++  D + I +E+         F D+    P D               T  E+  G  +++L  ++ L          +P  WW   ++  +GD  V+E    +AT N             +IV  +  R    +   +K P     + +P ++++    +    D K+  G     +     S+++++ST++  + +  L+    ++    K        E T+ LE SR Q+ S F++EF+V   L+G A+GS  SN++   +   V + +L ++ G F I  ++   ++ AR  LE  E+ +++ + L G ++ +N   + +I+  + + R+ + G D +NK        Q R   +  V  +  GT+ SI   + +L++  S +  + ++R +  +ID +L    + H
Sbjct:    6 VEVRGSRGAYYKGFVRDIHDDSLTIAFENNWQPERQVPFEDVRLPPPAD---------------TKKEIREGEEVEILSRANEL----------EPCGWWLGKVRMMKGDFYVIEYAACDATYN-------------EIVTFERLRPVNTNKPLSKNPFYKCTVPVPQDLQEACQAENAHKDFKKAVG-ACRISYCPETSHLVIVSTNEATVKRVSLLSDMHLRSLRTKLLLMSRNQEATKHLETSR-QLVSSFQEEFTVRLDLMGLAIGSHGSNIQQARKTAGVTAIELDEETGTFRIYGETAEAVKKARGFLEFLEDSVQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVKIEG-DNDNK--------QPR--QEGMVPFTFVGTKESISNVQVLLEYHISYLNEVEQLRLERMQIDEQLRQITQGH 382
[Close]
BLAST of SMED30002306 vs. Ensembl Medaka
Match: fmr1 (FMRP translational regulator 1 [Source:NCBI gene;Acc:101156831])

HSP 1 Score: 85.5001 bits (210), Expect = 2.989e-17
Identity = 83/414 (20.05%), Postives = 190/414 (45.89%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKY-------ELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLIS--LTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+A +++V    V + +E+       +P   + +             P   +G  I+    SD +  Y ++  + +P  WW A ++  +G+  V+E    +AT N             +IV ++  R    +   TK      ++++P+++R+  + +    D K+  G   + T       ++++S +++ + +A ++     +    K        E  +QLE SR Q+ S F ++F+V   L+G A+G+  +N++   ++P V +  L ++   F I  + Q  + +AR  LE  E+ I++ + L G ++ ++   + +++  + + R+ +   + EN    + +       S D+ ++     GT+ SI     +L +  + ++ + ++R +  +ID +L
Sbjct:    6 VEVRGTSGAFYKAFVKDVHEGSVTVAFENNWQPERQIPFQDVRFP------------PPAGSGKEIN---ESDEVEVY-SRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLN-------------EIVTLERLRPVNPNKPATKNTFFKIRLDVPEDLRQMCSKESAHKDFKKAVG-AFSVTYDSEKKQLVILSVNEVTLKRANMMSDMHFRSLRTKLTLMLRNEEANRQLESSR-QLASRFHEQFTVREDLMGLAIGTHGANIQQARKVPGVTNIDLDEETCTFHIYGEEQDAVRIARSFLEFSEDVIKVPRNLVGKVIGKSGKLIQEVVDKSGVVRVRI---EPENDKKPLAAAAAAAAASADEGMVPFVFVGTKESISNATVLLDYHLNYLKEVDQLRMERLQIDEQL 385
[Close]
BLAST of SMED30002306 vs. Ensembl Medaka
Match: fxr2 (fragile X mental retardation syndrome-related protein 1 [Source:NCBI gene;Acc:101154983])

HSP 1 Score: 84.7297 bits (208), Expect = 5.177e-17
Identity = 92/428 (21.50%), Postives = 194/428 (45.33%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDFVRIRYED---------FSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIG-NDIENKINTIDSTYQHRDIS-----DDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            +E++G  G  Y+  +++V  D + I +E+         FSD+    P D  Y+              E+  G  ++V           ++    +P  WW A ++  +G+  V+E    +AT N  + S +   L  +               F K P     I +P+++R  C ND+ ++ D ++  G    F  +  +  ++V+ST++  + +A L+     +         S   E T+ LE S+ Q+ + +++E  V   L+G A+GS  +N++   ++P V + +L ++   F I  ++   ++ ARE LE  E++ ++ + L G ++ +N   + +I+  + + R+ + G ND +     +      RD +     +  V     GT+ +I   + +L++  S ++ + ++R +  +ID +L
Sbjct:    6 VEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPAD--YHK-------------EIGEGDEVEVY----------SRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPLNPNTP--------SSRNTFYKVP-----IAVPEDLRDICANDNVHK-DFRKAIGANCIFYSAPTHE-LIVLSTNETTVKRATLLSDMHFRSIRTKLILMSRNEEATKHLETSK-QLAAAYQEEVRVREDLMGLAIGSHGANIQQARKVPGVTAIELEEESCTFRIYGETPEAVKQAREYLEFKEDYFQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTAGGGKEGMVPFVFVGTKENISNAQALLEYHVSYLQEVEQLRLERLQIDEQL 392
[Close]
BLAST of SMED30002306 vs. Ensembl Medaka
Match: fxr2 (fragile X mental retardation syndrome-related protein 1 [Source:NCBI gene;Acc:101154983])

HSP 1 Score: 81.2629 bits (199), Expect = 6.664e-16
Identity = 84/369 (22.76%), Postives = 170/369 (46.07%), Query Frame = 2 
Query:  308 KPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRK-CFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQ-------WSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNELLNDIRLH-----------NKNRSYDLTSENSNYSSLENGIE 1357
            +P  WW A ++  +G+  V+E    +AT N  + S +   L  +               F K P     I +P+++R  C ND+ ++ D ++  G    F  +  +  ++V+ST++  + +A L+     +         S   E T+ LE S+ Q+ + +++E  V   L+G A+GS  +N++   ++P V + +L ++   F I  ++   ++ ARE LE  E++ ++ + L G ++ +N   + +I+  + + R+ + G D + K+             +  V     GT+ +I   + +L++  S ++ + ++R +  +ID E L  I +              +R     SE SN S  E+G E
Sbjct:   74 EPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPLNPNTP--------SSRNTFYKVP-----IAVPEDLRDICANDNVHK-DFRKAIGANCIFYSAPTHE-LIVLSTNETTVKRATLLSDMHFRSIRTKLILMSRNEEATKHLETSK-QLAAAYQEEVRVREDLMGLAIGSHGANIQQARKVPGVTAIELEEESCTFRIYGETPEAVKQAREYLEFKEDYFQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEG-DNDKKLPR----------EEGMVPFVFVGTKENISNAQALLEYHVSYLQEVEQLRLERLQID-EQLRQIGVGYRAAPGRSGGPGPDREKGTNSELSNASEPEDGAE 414
[Close]
BLAST of SMED30002306 vs. Planmine SMEST
Match: SMESG000071777.1 (SMESG000071777.1)

HSP 1 Score: 911.368 bits (2354), Expect = 0.000e+0
Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 2 
Query:   35 MYDIKDIEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNELLNDIRLHNKNRSYDLTSENSNYSSLENGIEDVKINGHKKKTAWKD 1402
            MYDIKDIEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLEIFEEFIEIDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNELLNDIRLHNKNRSYDLTSENSNYSSLENGIEDVKINGHKKKTAWKD
Sbjct:    1 MYDIKDIEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLEIFEEFIEIDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNELLNDIRLHNKNRSYDLTSENSNYSSLENGIEDVKINGHKKKTAWKD 456
[Close]
BLAST of SMED30002306 vs. Planmine SMEST
Match: SMESG000013448.1 (SMESG000013448.1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.398e-22
Identity = 104/421 (24.70%), Postives = 197/421 (46.79%), Query Frame = 2 
Query:   53 IEIKGEYGEKYRAKLQEVIGDF-VRIRYEDFSDIVCVVPIDQIYYAQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSFKIEIPDEMRKCFNDDKYEI--DLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLI---------CKKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVI-GNDIENKINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNELLND 1276
            +EI G   E+Y AK+Q   GD  V +R++D  +I+  V +  +Y     N++   +   E++A   ID   T+ T+ + + K+ +    AWWPA + K +G       I L + +N +           DIVE+   R    +   ++  +   ++ +PD++  C   + Y+I  DL RWCG  +       N  + + ST    + KA L+          KK +    D  ELT++L  +   +++ + +EF+V  +L+G ++GS  SN+K   +L  +++  L D    F+I A++Q   + AR +LE  ++   +   +   ++  +   +  II  + + R+ V+ G D+    N  D   +H  +  D V     G+  SI     +L+F+  +   +  ++ +  EI  E+ N+
Sbjct:    7 VEILGSQNERYPAKIQAFAGDHDVIVRFDDCPEILSKVHLSVVYLVTETNKNCDFNIGSEVLAYQKIDDSTTNITM-FKDVKLTH----AWWPAKIGKLKG---CFAAITLKSKENENF---------NDIVELSSLRPFPSTRPISRNDVFIHEMVVPDDL--CDYCEHYDIRNDLNRWCGPTIVVNFDKINKRLQIYSTQQEVVRKASLLDASFMRVLRQKKLIHMQKD--ELTKRLNDT---IKNQYIEEFTVSEELMGLSIGSQGSNIKKARELEGIINIDLDDHTHTFTISAQTQEAAKAARAQLEYMKKIFYVPMDIVSKVIGRSGNQIQDIIDQSGVMRVRVVEGPDLS---NWKDEDNKH--LLADHVPFIFVGSSNSIRDACLLLEFSIDHHREMDRLQKERDEIHREIRNN 398
[Close]
BLAST of SMED30002306 vs. Planmine SMEST
Match: SMESG000033194.1 (SMESG000033194.1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.392e-13
Identity = 86/372 (23.12%), Postives = 164/372 (44.09%), Query Frame = 2 
Query:  317 AWWPAILKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIAFTKYPLKSF-----KIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYILVMSTDDIPIHKAKLICKKWVQQWSDKYELTQ-------QLEGSRYQMQSIFEDE-FSVDHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELAREKLXXXXXXXXXDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGN------------------------DIENKINTIDSTYQH-RDISDDKVLIS-----------------LTGTRLSIEKTREILQFASSNVEHILEIRPQLAEIDNEL 1267
            AWWPA ++  +GD L+V++  + +  +V         + + IV + +     +  +  + PL        +I+IP E+  C  D     DL R C    T    + NS ++V S D   I + +L+    ++    K+ L Q       +L+ SR   +++ E E F++ H  +G A+GS   N++   Q+  V+S  + D+   F+I AK++   + AR+ LE  E  +E+ + L   ++ +N + +  I+  + + R+ +  N                        D   K ++++  ++  + IS+ K LIS                   GT  SIE  + ++ F    ++ + +I+ + AEI  EL
Sbjct:  101 AWWPAHVQNIRGDYLIVKITGIESCKDV---------VERSIVRLVMTLNADDKSSLVRKPLNELSYFKREIDIPQELSSCSKDSTVHKDLLRPCKSSATLYYDEANSKLIVYSFDPDVIRQVELLEDTHLRMVRQKWTLMQSMNLASKRLQYSRIANKNVNEVESFTIPHGCMGLAIGSKGVNIQQARQIEGVISIDVNDKTCGFTIYAKTKEAAKAARKILEFSEANMEVSQHLVARIIGKNGVNIQSIVDKSGVIRVRIENNKPNDSKSNPTLRHGAKIDGAKLVKDTHKKNSSVNERFEKSKSISESKDLISCHDFMFNSSDKDFVNFVFIGTLESIENVKLLINFQVETLQDLDKIQAEKAEILREL 463
The following BLAST results are available for this feature:
BLAST of SMED30002306 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
FXR22.801e-1921.80FMR1 autosomal homolog 2 [Source:HGNC Symbol;Acc:H... [more]
FXR11.497e-1820.82FMR1 autosomal homolog 1 [Source:HGNC Symbol;Acc:H... [more]
FXR13.584e-1820.82FMR1 autosomal homolog 1 [Source:HGNC Symbol;Acc:H... [more]
FXR15.180e-1721.59FMR1 autosomal homolog 1 [Source:HGNC Symbol;Acc:H... [more]
FXR11.769e-1622.26FMR1 autosomal homolog 1 [Source:HGNC Symbol;Acc:H... [more]
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BLAST of SMED30002306 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30002306 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Fmr19.427e-1422.22gene:FBgn0028734 transcript:FBtr0347104[more]
Fmr19.427e-1422.22gene:FBgn0028734 transcript:FBtr0082198[more]
Fmr19.427e-1422.22gene:FBgn0028734 transcript:FBtr0082199[more]
Fmr19.427e-1422.22gene:FBgn0028734 transcript:FBtr0347105[more]
Fmr11.532e-1322.22gene:FBgn0028734 transcript:FBtr0082200[more]
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BLAST of SMED30002306 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
fxr12.367e-1922.32fragile X mental retardation, autosomal homolog 1 ... [more]
fxr13.713e-1922.32fragile X mental retardation, autosomal homolog 1 ... [more]
fxr28.341e-1520.56fragile X mental retardation, autosomal homolog 2 ... [more]
fxr22.073e-1420.56fragile X mental retardation, autosomal homolog 2 ... [more]
fmr14.479e-1420.77FMRP translational regulator 1 [Source:ZFIN;Acc:ZD... [more]
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BLAST of SMED30002306 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
fmr11.829e-1922.37fragile X mental retardation 1 [Source:NCBI gene;A... [more]
fmr13.753e-1821.74fragile X mental retardation 1 [Source:NCBI gene;A... [more]
fmr14.282e-1821.74fragile X mental retardation 1 [Source:NCBI gene;A... [more]
fmr16.125e-1821.74fragile X mental retardation 1 [Source:NCBI gene;A... [more]
fmr16.145e-1821.74fragile X mental retardation 1 [Source:NCBI gene;A... [more]
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BLAST of SMED30002306 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Fxr26.712e-2022.04fragile X mental retardation, autosomal homolog 2 ... [more]
Fxr18.984e-1920.82fragile X mental retardation gene 1, autosomal hom... [more]
Fxr11.505e-1820.82fragile X mental retardation gene 1, autosomal hom... [more]
Fxr12.077e-1820.82fragile X mental retardation gene 1, autosomal hom... [more]
Fxr16.400e-1820.82fragile X mental retardation gene 1, autosomal hom... [more]
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BLAST of SMED30002306 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q2KHP9|FMR1B_XENLA3.070e-1922.09Synaptic functional regulator FMR1 OS=Xenopus laev... [more]
sp|P51116|FXR2_HUMAN1.345e-1821.80Fragile X mental retardation syndrome-related prot... [more]
sp|P51114|FXR1_HUMAN1.721e-1720.82Fragile X mental retardation syndrome-related prot... [more]
sp|Q5XI81|FXR1_RAT1.722e-1720.82Fragile X mental retardation syndrome-related prot... [more]
sp|O70523|FXR1_CRIGR2.094e-1720.76Fragile X mental retardation syndrome-related prot... [more]
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BLAST of SMED30002306 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
V5I4G37.874e-2122.36Putative fragile x mental retardation syndrome-rel... [more]
A0A4Z2D1Q47.013e-2025.73Fragile X mental retardation syndrome-related prot... [more]
A0A4Z2D1Q57.384e-2025.73Fragile X mental retardation syndrome-related prot... [more]
A0A183R7U17.872e-2026.50Agenet-like domain-containing protein OS=Schistoso... [more]
A0A4Z2D1N81.434e-1926.87Fragile X mental retardation syndrome-related prot... [more]
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BLAST of SMED30002306 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
fxr16.590e-2021.56FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:103... [more]
fxr18.812e-2021.56FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:103... [more]
fmr13.553e-1620.41FMRP translational regulator 1 [Source:NCBI gene;A... [more]
fxr25.397e-1319.86fragile X mental retardation syndrome-related prot... [more]
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BLAST of SMED30002306 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ENSPMAT00000003147.15.781e-2222.28pep scaffold:Pmarinus_7.0:GL476998:149341:183802:-... [more]
ENSPMAT00000008476.16.504e-1925.38pep scaffold:Pmarinus_7.0:GL476831:2357:16482:1 ge... [more]
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BLAST of SMED30002306 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30002306 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO447311.186e-1220.24Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30002306 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
fxr11.842e-1921.50FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:101... [more]
fmr12.989e-1720.05FMRP translational regulator 1 [Source:NCBI gene;A... [more]
fxr25.177e-1721.50fragile X mental retardation syndrome-related prot... [more]
fxr26.664e-1622.76fragile X mental retardation syndrome-related prot... [more]
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BLAST of SMED30002306 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000071777.10.000e+0100.00SMESG000071777.1[more]
SMESG000013448.17.398e-2224.70SMESG000013448.1[more]
SMESG000033194.11.392e-1323.12SMESG000033194.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30002306 ID=SMED30002306|Name=SMED30002306|organism=Schmidtea mediterranea sexual|type=transcript|length=1467bp
GTAACATTTGTTTAATTATTGTTCACATTAAATTATGTATGATATAAAAG
ATATCGAAATTAAAGGAGAATATGGAGAAAAATATAGAGCGAAATTGCAA
GAGGTAATTGGAGATTTTGTACGCATTCGATATGAAGATTTTTCTGATAT
TGTTTGTGTAGTTCCAATTGATCAAATTTATTATGCTCAATATCCTAATC
AATCATGGCAAATGTCCACACTCCCAGAATTGATTGCTGGTGCCATGATT
GATGTTCTAATTACGAGTGATACATTACCCTATTATGAAGCGAAAATCGA
AAATGTTAAACCAAAAGCTTGGTGGCCAGCTATTTTGAAGAAAAGACAAG
GTGATCTACTAGTAGTTGAACTGATTAATTTAAATGCTACCGATAATGTG
GATATTAAATCTAACAAATTTGTTTCATTACGACAAGACATAGTAGAGAT
AGATTTGGCAAGATTTCGTTGTGAAAGTATAGCTTTCACGAAATATCCGT
TAAAATCTTTTAAAATTGAAATTCCAGATGAAATGAGAAAATGTTTTAAT
GATGACAAGTATGAAATTGATTTAAAAAGATGGTGTGGTGACCCAGTTAC
TTTCACAAAATCGGATAATAATAGTTATATATTGGTGATGTCTACTGACG
ATATACCAATACATAAGGCTAAATTAATTTGTAAAAAGTGGGTTCAACAA
TGGTCAGATAAATATGAGCTAACTCAACAATTGGAAGGATCGCGATATCA
AATGCAGTCAATATTTGAAGACGAATTCTCAGTTGATCATAAGCTATTGG
GATTTGCATTGGGTTCAGATTATAGTAATTTGAAAAATGTTTCCCAGCTT
CCGGAAGTTGTTTCAGCTCAGCTAATAGATCAAATCGGAAAATTCAGCAT
TGTCGCGAAAAGTCAATCTGGGTTGGAATTAGCTCGGGAGAAGCTTGAAA
TCTTCGAAGAATTTATTGAAATCGACAAACGTTTATTTGGAATATTATTA
TCAGAAAATTATTTGTTTCTAAGTCAAATTATTCATTTAACCGATTTATT
TCGGATGATGGTTATTGGAAATGATATAGAAAATAAAATAAACACGATAG
ATTCTACATATCAACATCGTGATATCAGCGACGATAAAGTCCTGATTTCT
CTCACTGGGACTCGTTTGTCCATTGAAAAAACTCGTGAAATATTACAATT
TGCTTCTAGCAATGTTGAACATATTTTGGAAATTAGGCCGCAGTTAGCAG
AAATTGATAATGAGTTACTTAATGATATTCGCTTGCATAATAAAAACAGG
TCTTATGATTTGACAAGTGAAAATTCTAATTATTCGTCCTTGGAAAATGG
TATTGAGGATGTTAAAATCAATGGTCACAAAAAGAAAACTGCTTGGAAAG
ATTGAATTTACAAATTATTTTAGAATACTGCTTAATGTGTTTTTGAGTTT
TAATATATTTGTTTTTT
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protein sequence of SMED30002306-orf-1

>SMED30002306-orf-1 ID=SMED30002306-orf-1|Name=SMED30002306-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=457bp
MYDIKDIEIKGEYGEKYRAKLQEVIGDFVRIRYEDFSDIVCVVPIDQIYY
AQYPNQSWQMSTLPELIAGAMIDVLITSDTLPYYEAKIENVKPKAWWPAI
LKKRQGDLLVVELINLNATDNVDIKSNKFVSLRQDIVEIDLARFRCESIA
FTKYPLKSFKIEIPDEMRKCFNDDKYEIDLKRWCGDPVTFTKSDNNSYIL
VMSTDDIPIHKAKLICKKWVQQWSDKYELTQQLEGSRYQMQSIFEDEFSV
DHKLLGFALGSDYSNLKNVSQLPEVVSAQLIDQIGKFSIVAKSQSGLELA
REKLEIFEEFIEIDKRLFGILLSENYLFLSQIIHLTDLFRMMVIGNDIEN
KINTIDSTYQHRDISDDKVLISLTGTRLSIEKTREILQFASSNVEHILEI
RPQLAEIDNELLNDIRLHNKNRSYDLTSENSNYSSLENGIEDVKINGHKK
KTAWKD*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0000099neuron
PLANA:0000463cholinergic neuron
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR040148FMR1
Vocabulary: biological process
TermDefinition
GO:0006417regulation of translation
Vocabulary: molecular function
TermDefinition
GO:0003729mRNA binding
GO:0003676nucleic acid binding
GO:0003723RNA binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036612K Homology domain, type 1 superfamilyGENE3DG3DSA:3.30.1370.10coord: 242..305
e-value: 3.0E-9
score: 38.3
IPR040148Fragile X mental retardation syndrome-related proteinPANTHERPTHR10603FRAGILE X MENTAL RETARDATION SYNDROME-RELATED PROTEINcoord: 7..424
NoneNo IPR availablePANTHERPTHR10603:SF7SYNAPTIC FUNCTIONAL REGULATOR FMR1coord: 7..424