Trans-aconitate 2-methyltransferase
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30002026 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of Trans-aconitate 2-methyltransferase vs. UniProt/SwissProt
Match: sp|Q91FT7|235L_IIV6 (Putative methyltransferase 235L OS=Invertebrate iridescent virus 6 OX=176652 GN=IIV6-235L PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 5.148e-10 Identity = 54/218 (24.77%), Postives = 103/218 (47.25%), Query Frame = 1 Query: 181 ATYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPGVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQDICKLPPLLSRVD-PIYPSKDFIQWILDQRFQIYLEQLVPVTNHFESVEMGKLFHRFLLPFLNFIPCHLREEFMKEFLSD 831 A+ K ++++GCG G IT++ K S +GID+ ++YA+E Y D M+ E + K D+ V+S F L W+ + F IS+ + G + + ++ + + + L+ WK+++ + L+ + IY ++ I+ ++F++Y +P T F+ + F+ +LP LN + RE F+ E L+D Sbjct: 44 ASNKTVIDIGCGNGKITNYISSLVKDGSVIGIDKDSSMIKYAKE---------TYPNVDFKVMDIQNENIDKKYDI--VVSFFCLPWIVNKQASFHHISNMMKSGSKLYILAAI-METNHVTLINNLMKKDHWKLFFVNYSSPFDYLNDIQYDIYANQSGIE---QKKFKVY---NIPYT--FKDRQSLHKFNLAILPQLNQLSIEHREIFITELLND 241
BLAST of Trans-aconitate 2-methyltransferase vs. UniProt/SwissProt
Match: sp|B3PTJ5|TAM_RHIE6 (Trans-aconitate 2-methyltransferase OS=Rhizobium etli (strain CIAT 652) OX=491916 GN=tam PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.930e-8 Identity = 51/234 (21.79%), Postives = 101/234 (43.16%), Query Frame = 1 Query: 184 TYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPGVEHFHISVVNFQEEL-----IDLVEAYEGHPTWKVYYQDICKLPPLLSRVDPIYPSKDFIQWILDQRFQIYLEQLV---PVTNHFESVEMGKLFHRFLLPFLNFIPCHLREEFMKEFLSDSRKACRSVDD 861 + ++ ++LGCG G T+ IE F E G+D + LE AR+ ++ + + DL + + + DL+ ++ V W+ D +++F + L+PG + V + L + + E+ P WK +++ R P+ P + ++ + +I + + P+ + + VE K L+P+L RE F+ ++L KA + D Sbjct: 30 SLRRAVDLGCGPGNSTELIIERFGAEGVSGLDSDVNMLEAARKRLPGTA----FVEADLGSWQPTEP-------ADLLFANAVFQWLPDHLDIFDRLMDGLSPG----GVLAVQMPDNLGEASHLAMEESAHAGP-WKAAFEEKS------VRRQPLAPPSAYYSRLIGKAARIDIWHTIYNHPMADAADIVEWVK--GTGLMPYLAHAGEAYREAFLADYLERIEKAYPKMSD 239
BLAST of Trans-aconitate 2-methyltransferase vs. UniProt/SwissProt
Match: sp|C0Z787|BIOC_BREBN (Malonyl-[acyl-carrier protein] O-methyltransferase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=bioC PE=3 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 4.879e-7 Identity = 32/136 (23.53%), Postives = 60/136 (44.12%), Query Frame = 1 Query: 91 ALSGSEYELCGKNTKLYVSKMIQSYVMPNKATYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPGV 498 A+S +Y L K ++S+M+ + N+ + +LE+GCGTG +T YF + ++ + LE A+ N + + + + D ++ K DL++S W P + ++ L PG Sbjct: 14 AVSYEKYALVQKKMADHLSQMVTE--ITNENDVRSILEIGCGTGGLTRVIRSYFSAAHYEAVEIAQGMLEQAKNNLEQHGLICSFSQADAEEWVWEQQAKSK----DLIVSGACFQWFARPAHTLRGLARILKPGA 143
BLAST of Trans-aconitate 2-methyltransferase vs. UniProt/SwissProt
Match: sp|C5BMZ8|BIOHC_TERTT (Biotin biosynthesis bifunctional protein BioHC OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=bioC PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 2.884e-6 Identity = 43/168 (25.60%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 82 SFSALSGSEYELCGKNTKLYVSKMIQSYVMPNKATYKKLLELGCGTGTITDFYIEYF----KPESFL-GIDEVEHYLEYARENHSKSSI--EIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPGVEHFHISVVNFQEELIDLVEAYE 564 SFS+ + EY+ + K V +++ + + + LL+LGCGTG + ++ F +PE + +D E L+ A++ + + +I + D+ ++ + E D ISS + W E+P++LF + L PG F +S + E L +L A+ Sbjct: 302 SFSS-AAQEYDTLARLQKRVVDSLVEFSLGTGGSVGQTLLDLGCGTGYCIERLLQQFPEITQPEGRIHALDIAEGMLDRAQQKFDELGVAEQINWHLGDMESLPFVDE------SFDGCISSLTVQWSENPLQLFSEMYRALKPG-GWFALSTLG-PETLFELRSAWR 460
BLAST of Trans-aconitate 2-methyltransferase vs. TrEMBL
Match: A0A443S2W9 (Juvenile hormone acid methyltransferase-like protein OS=Leptotrombidium deliense OX=299467 GN=B4U80_14090 PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.040e-12 Identity = 64/246 (26.02%), Postives = 116/246 (47.15%), Query Frame = 1 Query: 106 EYELCGKNTKLYVSKM--IQSYVMPNKATYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDL-NNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPGVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQDIC-KLPPLLSRVDPIYPSKDFIQWILDQRFQIYLEQLVPVTNHFESVEMGKLFHRFL------LPFLNFIPCHLREEFM 813 +Y C + + +K+ I + V+ + ++++GCGTG +T +++ K + + D+ E +E+A EN+ S EI Y+ D+ ++ ++LK L DLV S + HWV D + F IS L PG + F I + + +L + + W Y++++ K+ L + P D + Q + + + +T E V K F+ F+ PF+ +IP R+EFM Sbjct: 7 QYNDCNELQRYEAAKLFSIITQVVGPSPKFGIVVDIGCGTGNVTLDFLQLVKCDQLIAFDKSEFMIEFATENNKSS--EINYKVADIRDDFQKLKFDLNIVERADLVFSVYCFHWVVDKSKAFHNISQLLKPGGKCFLIFI--YWSDLFAYQRQFVLNSKWSEYFENLDEKMSSLAPAYTAVLPDIDHTRKKWTQLLESFGFEKCKITVE-EDVHFFKEFNVFMYDFQSVCPFIYYIPTAKRDEFM 247
BLAST of Trans-aconitate 2-methyltransferase vs. TrEMBL
Match: A0A443SDF5 (Methyltransf_25 domain-containing protein OS=Leptotrombidium deliense OX=299467 GN=B4U80_03586 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.913e-12 Identity = 67/253 (26.48%), Postives = 123/253 (48.62%), Query Frame = 1 Query: 151 MIQSYVMPNKATYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDL-NNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPGVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQDICKLPPLLSRVDPIYPSKDFIQWILDQRFQIYLE-QLVPVTNHFESVEMGKL----FHRFLL------PFLNFIPCHLREEFMKEFLSDSRK----ACRSVDD 861 MIQ P+ A + ++++GCGTG +T ++ + + + D+ + +E+ARE S E+ YE D+ +N +ELK +K + DLV S + LHWV++ + F+ I+ L PG + + + + + +L + WK Y I + +LS P + + + I D ++ ++ T +++ K F+ F+L P++NF+P R EF K++ RK ++VDD Sbjct: 25 MIQHDFGPS-AKFGTVVDIGCGTGNVTLDFLNSSQCDQLIAFDKNKSMIEFARE--INKSDEVNYEVADISDNFDELKYNIKLSKKADLVFSVYCLHWVQNKTKAFENINRFLKPGGKCYLLFM--YWSDLYMCDNEFILSSKWKKY---IPNIDEMLSTSAPFHKAS--LPNIADSTKKLKESMEIAGFTKCEVTIKQEKYFFEEFNHFMLDFHSVCPYVNFVPASERNEFFKDYFDFLRKNYNTGSKNVDD 267
BLAST of Trans-aconitate 2-methyltransferase vs. TrEMBL
Match: A0A1U7N2F8 (SAM-dependent methyltransferase OS=Moorea bouillonii PNG OX=568701 GN=BJP37_15010 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.469e-11 Identity = 58/208 (27.88%), Postives = 94/208 (45.19%), Query Frame = 1 Query: 196 LLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNP-GVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQDICKLPPLLSRVDPIYPSKDFIQWILDQRFQIYLEQLVPVTNHFESVEMGKLFHRFL-LPFLNFIPCHLREEFM 813 LL++GCG G IT + S LGID + +E AR K+ ++Y D M+ + N D++ S+ VLHW+ D + K++ ++L P G F + EL+ ++ P WK Y+ D P Y +++ +W+ + F+ QL+P + E K + R P+ N IP LRE F+ Sbjct: 38 LLDIGCGDGKITAEFASILNKGSVLGIDSSKTMVELAR----KTFPGVEYPNLDFKLMDATA--INLNHGFDVIFSNAVLHWINDHGSVLKSVRNHLKPHGKLLFQMGGKGNARELLLFIDEIITAPDWKEYFIDF-NFPY------SFYGIEEYQRWLPENGFKAQRVQLIPKDMQHQGKERLKGWLRTTWFPYTNRIPQKLRETFL 232
BLAST of Trans-aconitate 2-methyltransferase vs. TrEMBL
Match: A0A443S391 (Phosphomethylethanolamine N-methyltransferase-like protein OS=Leptotrombidium deliense OX=299467 GN=B4U80_05567 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.236e-11 Identity = 64/253 (25.30%), Postives = 113/253 (44.66%), Query Frame = 1 Query: 190 KKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEK-CDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPGVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQ----------DICKLPPLLSRVD----PIYPSKD----FIQW--ILD----QRFQIYLEQLVPVTNHFESV--EMGKLFHRFLLPFLNFIPCHLREEFMKEFLSDSRKACRSVDDKV 867 K ++++GCGTG +T + + + + D+ + +E+AR+ H + I + CD +LK + N +VD+V S LHW+ D + + IS L PG + + +++ F +++ L E P W Y+ D C P R P+Y D +W + D Q+ +++ V + F E+ L H FL +IP L++EF+ ++ D K C + D K+ Sbjct: 36 KSVIDVGCGTGNVTADILRFTDCDKLIAFDKSDSMIEFARQRHRNAKISFQIADICD--EWSKLKSDINLNEEVDVVFSVHCLHWITDKAKAIENISKMLKPGGQCY--ALLFFWSDILPLQEQITHFPKWNKYFSHLEKSDVTTTDKCLSPGKQRRRSSAPFPVYLRSDEQATINEWKSLCDSSGFSETQVSVKKSVFCFDDFTGFKDEVTSLCH-----FLRYIPDTLKQEFLNDYF-DHVKNCYTSDQKI 278
BLAST of Trans-aconitate 2-methyltransferase vs. TrEMBL
Match: A0A1D9G3E6 (SAM-dependent methyltransferase OS=Moorea producens JHB OX=1454205 GN=BJP36_21820 PE=4 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.695e-11 Identity = 59/208 (28.37%), Postives = 94/208 (45.19%), Query Frame = 1 Query: 196 LLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNP-GVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQDICKLPPLLSRVDPIYPSKDFIQWILDQRFQIYLEQLVPVTNHFESVEMGKLFHRFL-LPFLNFIPCHLREEFM 813 LL++GCG G IT + K S LGID + +E AR K+ +KY + M+ + N D+V S+ VLHW+ D + K + ++L P G F + EL+ ++E + WK Y+ D P Y +D+ W+ + F+ QL+P + E K + R P+ N +P L+E F+ Sbjct: 38 LLDIGCGDGKITAEFASIIKNGSVLGIDSSQTMVELAR----KTFPAVKYPNLEFKFMDATS--INLNHSFDVVFSNAVLHWINDHGSVLKGVRNHLKPHGKLLFQMGGKGNARELLLIIEEVITYTDWKEYFIDFT-FPY------SFYGIEDYQTWLPENGFKAERLQLIPKDMQHQGKEGLKGWLRTTWFPYTNRLPQELKETFL 232
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Yeast
Match: CRG1 (S-AdoMet-dependent methyltransferase involved in lipid homeostasis; mediates resistance to a drug cantharidin [Source:SGD;Acc:S000001252]) HSP 1 Score: 45.4394 bits (106), Expect = 5.317e-6 Identity = 41/128 (32.03%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 178 KATYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNL-NPGVEHFHISVVNFQEELIDLVEA 558 K T K L+++GCGTG T YFK +GID L A + ++ ++ K + E+L I ++ VD+VIS+ +HW + LF+ +SS L + G F + Q E +D EA Sbjct: 36 KGTRKSLVDIGCGTGKATFVVEPYFK--EVIGIDPSSAMLSIAEKETNERRLDKKIRFINAPG-EDLSSIRPES--VDMVISAEAIHWC-NLERLFQQVSSILRSDGTFAFWFYI---QPEFVDFPEA 154
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Nematostella
Match: EDO27174 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T9Z7]) HSP 1 Score: 58.151 bits (139), Expect = 6.620e-10 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 1 Query: 181 ATYKKLLELGCGTGTITDFYIEYFKPE-SFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPG 495 AT K +L+LGCGTG +T F + S +GID ++ +E A+ NH + +++ + + L E DLV S+FVLHW+ + F+ I +L PG Sbjct: 34 ATAKFVLDLGCGTGDVTGAMAANFSNDASIIGIDPDKYRVELAKSNHCSN---VQFLQGSAESFPHLGEEY-----YDLVFSNFVLHWIPQRTKAFRDIYDSLKPG 131
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Nematostella
Match: EDO30845 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SZN3]) HSP 1 Score: 58.151 bits (139), Expect = 7.134e-10 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 1 Query: 181 ATYKKLLELGCGTGTITDFYIEYFKPE-SFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPG 495 AT K +L+LGCGTG +T F + S +GID ++ +E A+ NH + +++ + + L E DLV S+FVLHW+ + F+ I +L PG Sbjct: 34 ATAKFVLDLGCGTGDVTGAMAANFSNDASIIGIDPDKYRVELAKSNHCSN---VQFLQGSAESFPHLGEEY-----YDLVFSNFVLHWIPQRTKAFRDIYDSLKPG 131
BLAST of Trans-aconitate 2-methyltransferase vs. Planmine SMEST
Match: SMESG000038731.1 (SMESG000038731.1) HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0 Identity = 273/276 (98.91%), Postives = 276/276 (100.00%), Query Frame = 1 Query: 79 MSFSALSGSEYELCGKNTKLYVSKMIQSYVMPNKATYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPGVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQDICKLPPLLSRVDPIYPSKDFIQWILDQRFQIYLEQLVPVTNHFESVEMGKLFHRFLLPFLNFIPCHLREEFMKEFLSDSRKACRSVDDKVTWKYNLFLFHTKN 906 MSFSALSGSEYELCGKNTKLYVSKMIQSYVMPNKATYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHW+EDPIELFKTISSNLNPGVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQDICKLPPLLSRVDPIYPSKDFIQWILDQRFQIYLEQLVPVTNHFESVEMG+LFH+FLLPFLNFIPCHLREEFMKEFLSDSRKACRSVDDKVTWKYNLFLFHTKN Sbjct: 1 MSFSALSGSEYELCGKNTKLYVSKMIQSYVMPNKATYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWLEDPIELFKTISSNLNPGVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQDICKLPPLLSRVDPIYPSKDFIQWILDQRFQIYLEQLVPVTNHFESVEMGELFHKFLLPFLNFIPCHLREEFMKEFLSDSRKACRSVDDKVTWKYNLFLFHTKN 276
BLAST of Trans-aconitate 2-methyltransferase vs. Planmine SMEST
Match: SMESG000038734.1 (SMESG000038734.1) HSP 1 Score: 305.449 bits (781), Expect = 1.025e-103 Identity = 144/276 (52.17%), Postives = 202/276 (73.19%), Query Frame = 1 Query: 79 MSFSALSGSEYELCGKNTKLYVSKMIQSYVMPNKATYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPGVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQDICKLPPLLSRVDPIYPSKDFIQWILDQRFQIYLEQLVPVTNHFESVEMGKLFHRFLLPFLNFIPCHLREEFMKEFLSDSRKACRSVDDKVTWKYNLFLFHTKN 906 MSF AL+ +Y+ G+ T+ +V M+ +V+P K TYKK+L+LGCGTG ITDF+IE+FKPESF+GID E +L + R+ S+IEIKYEKC+LN+MEELKEILK + D+DLV+SSFVLHW+ DPI LF+T+S LN VEH HISV N +LIDL+ YE HP WK YY+D C++PPL +R++PI+ SK+F + ILD +F+IYL+ +P+ + F + E+ +F +F+LPF IP HL +EF+ EF+++S R+ + + W Y+ F+ H KN Sbjct: 1 MSFLALTEEDYDKYGQITQSFVKGMMTKFVIPKKKTYKKMLDLGCGTGNITDFFIEFFKPESFIGIDTNESFLNFGRQRPYISTIEIKYEKCNLNDMEELKEILKNHPDIDLVVSSFVLHWINDPITLFQTLSLCLNGHVEHAHISVRNIPIDLIDLIGEYENHPKWKTYYEDKCQIPPLFNRIEPIFSSKEFYEKILDHKFEIYLQTSIPICHQFVTDELFTIFIKFILPFTKHIPKHLHDEFINEFVNNSSGFYRNDNGRYAWDYDFFVCHAKN 276
BLAST of Trans-aconitate 2-methyltransferase vs. Planmine SMEST
Match: SMESG000038735.1 (SMESG000038735.1) HSP 1 Score: 253.832 bits (647), Expect = 2.058e-83 Identity = 120/275 (43.64%), Postives = 185/275 (67.27%), Query Frame = 1 Query: 79 MSFSALSGSEYELCGKNTKLYVSKMIQSYVMPNKATYKKLLELGCGTGTITDFYIEYFKPESFLGIDEVEHYLEYARENHSKSSIEIKYEKCDLNNMEELKEILKKNLDVDLVISSFVLHWVEDPIELFKTISSNLNPGVEHFHISVVNFQEELIDLVEAYEGHPTWKVYYQDICKLPPLLSRVDPIYPSKDFIQWILDQRFQIYLEQLVPVTNHFESVEMGKLFHRFLLPFLNFIPCHLREEFMKEFLSDSRKACRSVDDKVTWKYNLFLFHTK 903 M F A++G EY+ I+ V+P K +Y KLL++G GTG+ TDF ++++ P+SFLG+D+ E +LEYAR+ KSS+EI YEKCD + ++LK++L+K+ D+DLV+SS +H++ DPI+LF+T S L VEH H+SV +ELID VE Y H WK+Y++ ++ P+ S + +YPS+ ++ +LD ++I+LE+ PV+N F S E K +R LLP + IP HL+ EF+ EF+++SR CR+ ++KV W+Y+LF+ H K Sbjct: 1 MHFFAINGDEYDEFMGYVNKTSKNAIKYNVVPLKKSYNKLLDIGSGTGSFTDFLVDFYHPKSFLGLDQSEGFLEYARQRTYKSSVEINYEKCDFGDPKQLKKVLRKHPDIDLVVSSHSIHFLNDPIKLFETFISCLTGDVEHVHVSVRKLSQELIDFVENYRNHQEWKIYFEKDYQVSPMFSSDETVYPSEKSLRQLLDLNYKIHLEKFFPVSNEFYSYEQLKYVYRSLLPLMQIIPDHLKNEFIDEFMAESRNLCRNTENKVFWQYDLFILHAK 275 The following BLAST results are available for this feature:
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of Trans-aconitate 2-methyltransferase vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 4
BLAST of Trans-aconitate 2-methyltransferase vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Trans-aconitate 2-methyltransferase vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Trans-aconitate 2-methyltransferase vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30002026 ID=SMED30002026|Name=Trans-aconitate 2-methyltransferase|organism=Schmidtea mediterranea sexual|type=transcript|length=973bpback to top protein sequence of SMED30002026-orf-1 >SMED30002026-orf-1 ID=SMED30002026-orf-1|Name=SMED30002026-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=277bp MSFSALSGSEYELCGKNTKLYVSKMIQSYVMPNKATYKKLLELGCGTGTIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|