Heterogeneous nuclear ribonucleoprotein

Overview
NameHeterogeneous nuclear ribonucleoprotein
Smed IDSMED30001933
Length (bp)2345
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Heterogeneous nuclear ribonucleoprotein (SMED30001933) t-SNE clustered cells

Violin plots show distribution of expression levels for Heterogeneous nuclear ribonucleoprotein (SMED30001933) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Heterogeneous nuclear ribonucleoprotein (SMED30001933) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Heterogeneous nuclear ribonucleoprotein (SMED30001933) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30001933

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30001933h1SMcG0006829 SmedASXL_014504SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30001933h1SMcG0006829 SmedASXL_014504SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
pharynxSMED30001933h1SMcG0006829 dd_Smed_v4_2383_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30001933h1SMcG0006829 dd_Smed_v4_2383_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30001933h1SMcG0006829 dd_Smed_v4_2383_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30001933h1SMcG0006829 dd_Smed_v4_2383_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30001933h1SMcG0006829 Contig54187uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30001933h1SMcG0006829 Contig54187newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Human
Match: GRSF1 (G-rich RNA sequence binding factor 1 [Source:HGNC Symbol;Acc:HGNC:4610])

HSP 1 Score: 89.7373 bits (221), Expect = 2.476e-18
Identity = 45/142 (31.69%), Postives = 80/142 (56.34%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + I+ +G+P+  TM+D++ F  D  I+  + GIHF +++     G+A IE+ESE+D+ KA ++H  +MG+RY+EV+     D+    K + V  +                   +  + V+RL+GLPY+ ++ DI +FF G+
Sbjct:   94 FLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSSP------------------VVNDGVVRLRGLPYSCNEKDIVDFFAGL 217
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Human
Match: GRSF1 (G-rich RNA sequence binding factor 1 [Source:HGNC Symbol;Acc:HGNC:4610])

HSP 1 Score: 89.7373 bits (221), Expect = 2.556e-18
Identity = 45/142 (31.69%), Postives = 80/142 (56.34%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + I+ +G+P+  TM+D++ F  D  I+  + GIHF +++     G+A IE+ESE+D+ KA ++H  +MG+RY+EV+     D+    K + V  +                   +  + V+RL+GLPY+ ++ DI +FF G+
Sbjct:   87 FLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSSP------------------VVNDGVVRLRGLPYSCNEKDIVDFFAGL 210
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Human
Match: GRSF1 (G-rich RNA sequence binding factor 1 [Source:HGNC Symbol;Acc:HGNC:4610])

HSP 1 Score: 89.3521 bits (220), Expect = 5.499e-18
Identity = 45/142 (31.69%), Postives = 80/142 (56.34%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + I+ +G+P+  TM+D++ F  D  I+  + GIHF +++     G+A IE+ESE+D+ KA ++H  +MG+RY+EV+     D+    K + V  +                   +  + V+RL+GLPY+ ++ DI +FF G+
Sbjct:  150 FLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSSP------------------VVNDGVVRLRGLPYSCNEKDIVDFFAGL 273
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Human
Match: GRSF1 (G-rich RNA sequence binding factor 1 [Source:HGNC Symbol;Acc:HGNC:4610])

HSP 1 Score: 88.9669 bits (219), Expect = 6.420e-18
Identity = 45/142 (31.69%), Postives = 80/142 (56.34%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + I+ +G+P+  TM+D++ F  D  I+  + GIHF +++     G+A IE+ESE+D+ KA ++H  +MG+RY+EV+     D+    K + V  +                   +  + V+RL+GLPY+ ++ DI +FF G+
Sbjct:  123 FLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSSP------------------VVNDGVVRLRGLPYSCNEKDIVDFFAGL 246
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Human
Match: HNRNPH1 (heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041])

HSP 1 Score: 81.6481 bits (200), Expect = 2.428e-17
Identity = 46/142 (32.39%), Postives = 73/142 (51.41%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIK 473
            +K+RG+P+  + D++  F  D  I+   +GI F  ++     GEAF+ELESE+++  A  +  + MG RY+EVF S   +M    K                        +  N+ +V RL+GLP+  SK +I +FF GI+K
Sbjct:   13 VKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT-----------------GPNSPDTANDGFV-RLRGLPFGCSKEEIVQFFSGILK 136
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Celegans
Match: hrpf-1 (HnRNP F homolog [Source:UniProtKB/TrEMBL;Acc:H2KZN0])

HSP 1 Score: 61.2326 bits (147), Expect = 1.318e-9
Identity = 33/83 (39.76%), Postives = 50/83 (60.24%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLK 296
            ++LRG+P+  T  DI +FL  + I   + GI  P  QR    GEA++  E+ E +  AK RH +++G RYIEVF +T  D+ +
Sbjct:  125 VRLRGLPFSVTSRDISDFLAPLPI--VRDGILLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVFEATHRDLSR 205
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Celegans
Match: sym-2 (RNA-binding protein sym-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22708])

HSP 1 Score: 60.077 bits (144), Expect = 2.446e-9
Identity = 43/153 (28.10%), Postives = 73/153 (47.71%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEF---FQGIIKFEDMFKLF 497
            +++RG+PY  T   I  F   + +      I F         G+AF++ E+EED  +   +H Q +G+RYIE+F ST A++ +  K        N         +  +  E   ++ V RL+GLPY A+   I  F   F  ++KF+ +  ++
Sbjct:   11 VRMRGLPYDCTDAQIRTFFEPLKLTDK---ILFITRTDGRPTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRC------NLINSSPAVANAVEAPEEKKKDCV-RLRGLPYEATVQHIVTFLGDFATMVKFQGVHMVY 153

HSP 2 Score: 52.373 bits (124), Expect = 8.085e-7
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNK-AKDRHNQHMG----RRYIEVFSSTKADM 290
            ++LRG+PY  T+  I+ FL D       +G+H   + +    GEAFI++ +E+  +  A   HN  M     +RYIEVF ++  ++
Sbjct:  119 VRLRGLPYEATVQHIVTFLGDFATMVKFQGVHMVYNNQGHPSGEAFIQMINEQAASACAAGVHNNFMSVGKKKRYIEVFQASAEEL 204
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Celegans
Match: sym-2 (RNA-binding protein sym-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22708])

HSP 1 Score: 60.077 bits (144), Expect = 2.446e-9
Identity = 43/153 (28.10%), Postives = 73/153 (47.71%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEF---FQGIIKFEDMFKLF 497
            +++RG+PY  T   I  F   + +      I F         G+AF++ E+EED  +   +H Q +G+RYIE+F ST A++ +  K        N         +  +  E   ++ V RL+GLPY A+   I  F   F  ++KF+ +  ++
Sbjct:   11 VRMRGLPYDCTDAQIRTFFEPLKLTDK---ILFITRTDGRPTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRC------NLINSSPAVANAVEAPEEKKKDCV-RLRGLPYEATVQHIVTFLGDFATMVKFQGVHMVY 153

HSP 2 Score: 52.373 bits (124), Expect = 8.085e-7
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNK-AKDRHNQHMG----RRYIEVFSSTKADM 290
            ++LRG+PY  T+  I+ FL D       +G+H   + +    GEAFI++ +E+  +  A   HN  M     +RYIEVF ++  ++
Sbjct:  119 VRLRGLPYEATVQHIVTFLGDFATMVKFQGVHMVYNNQGHPSGEAFIQMINEQAASACAAGVHNNFMSVGKKKRYIEVFQASAEEL 204
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Celegans
Match: hrpf-1 (HnRNP F homolog [Source:UniProtKB/TrEMBL;Acc:H2KZN0])

HSP 1 Score: 60.8474 bits (146), Expect = 2.538e-9
Identity = 33/83 (39.76%), Postives = 50/83 (60.24%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLK 296
            ++LRG+P+  T  DI +FL  + I   + GI  P  QR    GEA++  E+ E +  AK RH +++G RYIEVF +T  D+ +
Sbjct:  125 VRLRGLPFSVTSRDISDFLAPLPI--VRDGILLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVFEATHRDLSR 205
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Celegans
Match: sym-2 (RNA-binding protein sym-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22708])

HSP 1 Score: 59.6918 bits (143), Expect = 7.231e-9
Identity = 43/153 (28.10%), Postives = 73/153 (47.71%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEF---FQGIIKFEDMFKLF 497
            +++RG+PY  T   I  F   + +      I F         G+AF++ E+EED  +   +H Q +G+RYIE+F ST A++ +  K        N         +  +  E   ++ V RL+GLPY A+   I  F   F  ++KF+ +  ++
Sbjct:  283 VRMRGLPYDCTDAQIRTFFEPLKLTDK---ILFITRTDGRPTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRC------NLINSSPAVANAVEAPEEKKKDCV-RLRGLPYEATVQHIVTFLGDFATMVKFQGVHMVY 425

HSP 2 Score: 51.6026 bits (122), Expect = 2.303e-6
Identity = 28/87 (32.18%), Postives = 47/87 (54.02%), Query Frame = 3 
Query:   45 WIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNK-AKDRHNQHMG----RRYIEVFSSTKADM 290
             ++LRG+PY  T+  I+ FL D       +G+H   + +    GEAFI++ +E+  +  A   HN  M     +RYIEVF ++  ++
Sbjct:  390 CVRLRGLPYEATVQHIVTFLGDFATMVKFQGVHMVYNNQGHPSGEAFIQMINEQAASACAAGVHNNFMSVGKKKRYIEVFQASAEEL 476
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Fly
Match: glo (gene:FBgn0259139 transcript:FBtr0089918)

HSP 1 Score: 82.8037 bits (203), Expect = 6.100e-18
Identity = 45/148 (30.41%), Postives = 83/148 (56.08%), Query Frame = 3 
Query:   36 SEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIE-WGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKF 476
            S  +++LRG+P+  T  +I++FL ++ +     GIH   S+ + +  GEA++E+ S+ED+ +A+  +   MG RYIEVF++T     K  K+    ++ +G                    +V++L+GLPY  ++  I+EFF GI+++
Sbjct:   47 SPKFVRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATP----KEAKEAMRKISGHGTA------------------FVVKLRGLPYAVTEQQIEEFFSGILRY 172
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Fly
Match: glo (gene:FBgn0259139 transcript:FBtr0089917)

HSP 1 Score: 78.1814 bits (191), Expect = 1.245e-14
Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 3 
Query:   36 SEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIE-WGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            S  +++LRG+P+  T  +I++FL ++ +     GIH   S+ + +  GEA++E+ S+ED+ +A+  +   MG RYIEVF++T     K  K+    ++ +G                    +V++L+GLPY  ++  I+EFF G+
Sbjct:   47 SPKFVRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATP----KEAKEAMRKISGHGTA------------------FVVKLRGLPYAVTEQQIEEFFSGL 169

HSP 2 Score: 70.4774 bits (171), Expect = 3.505e-12
Identity = 34/85 (40.00%), Postives = 53/85 (62.35%), Query Frame = 3 
Query:   36 SEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            + + +KLRG+PY  T   I EF   + IK  + GI F + +R    GEAF++ ES++D  +A  R+ + +G RYIE+F S+ A+M
Sbjct:  144 TAFVVKLRGLPYAVTEQQIEEFFSGLDIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEM 228
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Fly
Match: glo (gene:FBgn0259139 transcript:FBtr0089919)

HSP 1 Score: 78.1814 bits (191), Expect = 1.245e-14
Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 3 
Query:   36 SEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIE-WGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            S  +++LRG+P+  T  +I++FL ++ +     GIH   S+ + +  GEA++E+ S+ED+ +A+  +   MG RYIEVF++T     K  K+    ++ +G                    +V++L+GLPY  ++  I+EFF G+
Sbjct:   47 SPKFVRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATP----KEAKEAMRKISGHGTA------------------FVVKLRGLPYAVTEQQIEEFFSGL 169

HSP 2 Score: 70.4774 bits (171), Expect = 3.505e-12
Identity = 34/85 (40.00%), Postives = 53/85 (62.35%), Query Frame = 3 
Query:   36 SEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            + + +KLRG+PY  T   I EF   + IK  + GI F + +R    GEAF++ ES++D  +A  R+ + +G RYIE+F S+ A+M
Sbjct:  144 TAFVVKLRGLPYAVTEQQIEEFFSGLDIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEM 228
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Fly
Match: fus (gene:FBgn0023441 transcript:FBtr0087343)

HSP 1 Score: 62.7734 bits (151), Expect = 1.177e-9
Identity = 39/137 (28.47%), Postives = 66/137 (48.18%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFF 458
            ++ RG+P++++  DI +F    G+  +K G+   +S      GEA I    +E  + A  RH  H+G RYIEV+ ++  D L        A NE            +Q         ++R++GLPY+A+   + +FF
Sbjct:  281 VRARGLPWQSSDQDIAKFF--RGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGG---ASNE------------AQAFLSKGAQVIIRMRGLPYDATAKQVLDFF 400

HSP 2 Score: 59.6918 bits (143), Expect = 1.019e-8
Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 3 
Query:   18 FLVSKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLN-KAKDRHNQHM--GR--RYIEVFSSTKADM 290
             + S  ++  I+LRG+PY   ++ I+ FL D       +G+H  I+ +    GEAFI+++ EE     A+ RHN +M  G+  RYIEVF  +  DM
Sbjct:  538 LITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDM 633

HSP 3 Score: 58.151 bits (139), Expect = 2.696e-8
Identity = 30/94 (31.91%), Postives = 50/94 (53.19%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFL-----PDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            +SK ++  I++RG+PY  T   +++F      P   +     G+ F         G+AF+   +E D  KA  RH + +G+RYIE+F ST A++
Sbjct:  374 LSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEV 467
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Fly
Match: fus (gene:FBgn0023441 transcript:FBtr0087344)

HSP 1 Score: 62.7734 bits (151), Expect = 1.177e-9
Identity = 39/137 (28.47%), Postives = 66/137 (48.18%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFF 458
            ++ RG+P++++  DI +F    G+  +K G+   +S      GEA I    +E  + A  RH  H+G RYIEV+ ++  D L        A NE            +Q         ++R++GLPY+A+   + +FF
Sbjct:  281 VRARGLPWQSSDQDIAKFF--RGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGG---ASNE------------AQAFLSKGAQVIIRMRGLPYDATAKQVLDFF 400

HSP 2 Score: 59.6918 bits (143), Expect = 1.019e-8
Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 3 
Query:   18 FLVSKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLN-KAKDRHNQHM--GR--RYIEVFSSTKADM 290
             + S  ++  I+LRG+PY   ++ I+ FL D       +G+H  I+ +    GEAFI+++ EE     A+ RHN +M  G+  RYIEVF  +  DM
Sbjct:  538 LITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDM 633

HSP 3 Score: 58.151 bits (139), Expect = 2.696e-8
Identity = 30/94 (31.91%), Postives = 50/94 (53.19%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFL-----PDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            +SK ++  I++RG+PY  T   +++F      P   +     G+ F         G+AF+   +E D  KA  RH + +G+RYIE+F ST A++
Sbjct:  374 LSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEV 467
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Zebrafish
Match: hnrnph3 (heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878])

HSP 1 Score: 85.1149 bits (209), Expect = 4.535e-19
Identity = 48/145 (33.10%), Postives = 74/145 (51.03%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM---LKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +++RG+P+  T +++  F  D  I G   G+ F  S+     GEAF+EL+S ED  KA  +  ++MG RYIEVF S +++M   LK  +  P   + +                      +LRL+GLP+  SK +I +FF G 
Sbjct:    8 YVVRIRGLPWSCTQEEVASFFSDCDIVGKVNGVCFTFSKEGRPSGEAFVELKSSEDFKKALAKDRKYMGHRYIEVFRSNRSEMDWVLK--RSGPTDYDGS-------------------SGCMLRLRGLPFGCSKEEIVQFFSGT 131
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Zebrafish
Match: grsf1 (G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196])

HSP 1 Score: 86.6557 bits (213), Expect = 1.513e-17
Identity = 50/150 (33.33%), Postives = 78/150 (52.00%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKAD---MLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFED 482
            + ++ +G+P+  T +DI+ F  +  I+G   G+H   ++     G+AFIELE EED+ KA D+H  ++  R+IEV   T  D   +LKA K                        ER+  + V+RL+GLPY+ ++ DI  FF G+   ED
Sbjct:  115 FIVQAKGLPWSCTAEDIMSFFSECRIRGGVNGVHILYNKYGKPSGQAFIELEHEEDVGKALDQHRHYLRDRFIEVREVTNKDAEAILKASK------------------------ERVETDTVVRLRGLPYSCTEGDIIRFFSGLDVVED 240

HSP 2 Score: 57.7658 bits (138), Expect = 2.884e-8
Identity = 39/140 (27.86%), Postives = 71/140 (50.71%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            ++LRG+PY  T  DII F    G+   + G+   +++R    G+AF+E  ++    KA  +  + +G RYIE+F + K+ +    +       +N R    R       +  + +N V+ ++GLP++A   DI +FF  +
Sbjct:  214 VRLRGLPYSCTEGDIIRFFS--GLDVVEDGVTIILNRRGKSSGDAFVEFATKAMAEKALKKDREILGNRYIEIFPAMKSAIPSQNRSW-----QNDRVFTPRAEDPPLRNTTVTKN-VIHMRGLPFDAKAEDIVKFFAPV 345
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Zebrafish
Match: hnrnph3 (heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878])

HSP 1 Score: 83.9593 bits (206), Expect = 1.090e-16
Identity = 48/145 (33.10%), Postives = 75/145 (51.72%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM---LKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +++RG+P+  T +++  F  D  I G   G+ F  S+     GEAF+EL+S ED  KA  +  ++MG RYIEVF S +++M   LK  +  P   + +                      +LRL+GLP+  SK +I +FF G+
Sbjct:    8 YVVRIRGLPWSCTQEEVASFFSDCDIVGKVNGVCFTFSKEGRPSGEAFVELKSSEDFKKALAKDRKYMGHRYIEVFRSNRSEMDWVLK--RSGPTDYDGS-------------------SGCMLRLRGLPFGCSKEEIVQFFSGL 131

HSP 2 Score: 60.077 bits (144), Expect = 5.036e-9
Identity = 29/85 (34.12%), Postives = 51/85 (60.00%), Query Frame = 3 
Query:   36 SEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            S   ++LRG+P+  + ++I++F    G+K    GI  P+  +    GEAF++  S+E   KA  +H + +G RYIE+F S++ +M
Sbjct:  106 SGCMLRLRGLPFGCSKEEIVQFFS--GLKIVPNGITLPMDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNEM 188
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Zebrafish
Match: hnrnph3 (heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878])

HSP 1 Score: 83.9593 bits (206), Expect = 1.090e-16
Identity = 48/145 (33.10%), Postives = 75/145 (51.72%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM---LKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +++RG+P+  T +++  F  D  I G   G+ F  S+     GEAF+EL+S ED  KA  +  ++MG RYIEVF S +++M   LK  +  P   + +                      +LRL+GLP+  SK +I +FF G+
Sbjct:    8 YVVRIRGLPWSCTQEEVASFFSDCDIVGKVNGVCFTFSKEGRPSGEAFVELKSSEDFKKALAKDRKYMGHRYIEVFRSNRSEMDWVLK--RSGPTDYDGS-------------------SGCMLRLRGLPFGCSKEEIVQFFSGL 131

HSP 2 Score: 60.077 bits (144), Expect = 5.036e-9
Identity = 29/85 (34.12%), Postives = 51/85 (60.00%), Query Frame = 3 
Query:   36 SEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            S   ++LRG+P+  + ++I++F    G+K    GI  P+  +    GEAF++  S+E   KA  +H + +G RYIE+F S++ +M
Sbjct:  106 SGCMLRLRGLPFGCSKEEIVQFFS--GLKIVPNGITLPMDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNEM 188
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Zebrafish
Match: hnrnph3 (heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878])

HSP 1 Score: 83.9593 bits (206), Expect = 1.090e-16
Identity = 48/145 (33.10%), Postives = 75/145 (51.72%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM---LKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +++RG+P+  T +++  F  D  I G   G+ F  S+     GEAF+EL+S ED  KA  +  ++MG RYIEVF S +++M   LK  +  P   + +                      +LRL+GLP+  SK +I +FF G+
Sbjct:    8 YVVRIRGLPWSCTQEEVASFFSDCDIVGKVNGVCFTFSKEGRPSGEAFVELKSSEDFKKALAKDRKYMGHRYIEVFRSNRSEMDWVLK--RSGPTDYDGS-------------------SGCMLRLRGLPFGCSKEEIVQFFSGL 131

HSP 2 Score: 60.077 bits (144), Expect = 5.036e-9
Identity = 29/85 (34.12%), Postives = 51/85 (60.00%), Query Frame = 3 
Query:   36 SEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            S   ++LRG+P+  + ++I++F    G+K    GI  P+  +    GEAF++  S+E   KA  +H + +G RYIE+F S++ +M
Sbjct:  106 SGCMLRLRGLPFGCSKEEIVQFFS--GLKIVPNGITLPMDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNEM 188
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Xenopus
Match: syngap1 (synaptic Ras GTPase activating protein 1 [Source:Xenbase;Acc:XB-GENE-487270])

HSP 1 Score: 87.4261 bits (215), Expect = 6.612e-18
Identity = 45/142 (31.69%), Postives = 76/142 (53.52%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + +++RG+P+  T DD++ F  D  ++    G+HF  ++     G+A IE ES ED+ KA ++H ++MG+RY+EVF   + +       M  A++             S        + V+RL+GLPY+ S+ DI  FF G+
Sbjct:    2 FIVRVRGLPWSCTADDVLNFFGDSNVRNGTEGVHFIFNRDGKPRGDAVIEFESAEDVQKAVEQHKKYMGQRYVEVFEMNQKEAESLLNRMHSALSPTRPSSMSLSPQSSMASP--PSDGVVRLRGLPYSCSEQDIIHFFSGL 141

HSP 2 Score: 70.4774 bits (171), Expect = 2.578e-12
Identity = 51/186 (27.42%), Postives = 84/186 (45.16%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKA-----------------------------CKDMPVAVNENGX-----XXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFE 479
             S  S+  ++LRG+PY  +  DII F   + I  +  GI F + QR  + GEAF++  S+E  ++A  +H Q +G RYIE+F S + ++  A                              KD+   V ENG      +    +    Q    ++  + + ++GLP++AS  DI  FF  I+  +
Sbjct:  112 ASPPSDGVVRLRGLPYSCSEQDIIHFFSGLDI--ADEGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIFPSRRNEIQTARFPFRRRKGVTFAPTIKDLYDPDNCINNTSKDLLSDVPENGHINDYVKEMSAKSMDVQDFTVMSPVHDIHIRGLPFHASGQDIANFFHPIMPLK 295
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Xenopus
Match: syngap1 (synaptic Ras GTPase activating protein 1 [Source:Xenbase;Acc:XB-GENE-487270])

HSP 1 Score: 87.4261 bits (215), Expect = 1.602e-17
Identity = 48/150 (32.00%), Postives = 81/150 (54.00%), Query Frame = 3 
Query:   21 LVSKMSEYWI-KLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            L +K++  +I ++RG+P+  T DD++ F  D  ++    G+HF  ++     G+A IE ES ED+ KA ++H ++MG+RY+EVF   + +       M  A++             S        + V+RL+GLPY+ S+ DI  FF G+
Sbjct:   86 LANKLTTMFIVRVRGLPWSCTADDVLNFFGDSNVRNGTEGVHFIFNRDGKPRGDAVIEFESAEDVQKAVEQHKKYMGQRYVEVFEMNQKEAESLLNRMHSALSPTRPSSMSLSPQSSMASP--PSDGVVRLRGLPYSCSEQDIIHFFSGL 233

HSP 2 Score: 70.4774 bits (171), Expect = 4.997e-12
Identity = 52/186 (27.96%), Postives = 85/186 (45.70%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKA------------------------C-----KDMPVAVNENGX-----XXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFE 479
             S  S+  ++LRG+PY  +  DII F   + I  +  GI F + QR  + GEAF++  S+E  ++A  +H Q +G RYIE+F S + ++  A                        C     KD+   V ENG      +    +    Q    ++  + + ++GLP++AS  DI  FF  I+  +
Sbjct:  204 ASPPSDGVVRLRGLPYSCSEQDIIHFFSGLDI--ADEGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIFPSRRNEIQTARFPFRRRKGVTFAPTIKDLYDPDNCINNTSKDLLSDVPENGHINDYVKEMSAKSMDVQDFTVMSPVHDIHIRGLPFHASGQDIANFFHPIMPLK 387
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Xenopus
Match: cdc37 (cell division cycle 37 [Source:Xenbase;Acc:XB-GENE-979269])

HSP 1 Score: 85.8853 bits (211), Expect = 3.634e-17
Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 3 
Query:   39 EYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM---LKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            E+ +++RG+P+  T ++++EF  +  I     GIHF  S+     GEAFI L++EEDL KA ++  ++MG RYIEVF S   +M   LK      V    +G                      +RL+GLP+  SK +I +FF G+
Sbjct:    4 EFIVRVRGLPWSCTKEEVLEFFSECSIIEGVSGIHFTTSKEGRPSGEAFIILDTEEDLKKALEKDRKYMGHRYIEVFKSNNTEMEWVLKHNSTGDVDTASDG---------------------TVRLRGLPFGCSKEEIVQFFSGL 128

HSP 2 Score: 56.225 bits (134), Expect = 1.480e-7
Identity = 26/89 (29.21%), Postives = 52/89 (58.43%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            V   S+  ++LRG+P+  + ++I++F    G++    GI   +  +    GEAF++  S+E    A  +H + +G RYIE+F S+++++
Sbjct:   99 VDTASDGTVRLRGLPFGCSKEEIVQFFS--GLRIVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRSEI 185
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Xenopus
Match: cdc37 (cell division cycle 37 [Source:Xenbase;Acc:XB-GENE-979269])

HSP 1 Score: 85.8853 bits (211), Expect = 3.804e-17
Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 3 
Query:   39 EYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM---LKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            E+ +++RG+P+  T ++++EF  +  I     GIHF  S+     GEAFI L++EEDL KA ++  ++MG RYIEVF S   +M   LK      V    +G                      +RL+GLP+  SK +I +FF G+
Sbjct:    4 EFIVRVRGLPWSCTKEEVLEFFSECSIIEGVSGIHFTTSKEGRPSGEAFIILDTEEDLKKALEKDRKYMGHRYIEVFKSNNTEMEWVLKHNSTGDVDTASDG---------------------TVRLRGLPFGCSKEEIVQFFSGL 128

HSP 2 Score: 56.225 bits (134), Expect = 1.354e-7
Identity = 26/89 (29.21%), Postives = 52/89 (58.43%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            V   S+  ++LRG+P+  + ++I++F    G++    GI   +  +    GEAF++  S+E    A  +H + +G RYIE+F S+++++
Sbjct:   99 VDTASDGTVRLRGLPFGCSKEEIVQFFS--GLRIVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRSEI 185
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Xenopus
Match: cdc37 (cell division cycle 37 [Source:Xenbase;Acc:XB-GENE-979269])

HSP 1 Score: 85.5001 bits (210), Expect = 5.551e-17
Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 3 
Query:   39 EYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM---LKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            E+ +++RG+P+  T ++++EF  +  I     GIHF  S+     GEAFI L++EEDL KA ++  ++MG RYIEVF S   +M   LK      V    +G                      +RL+GLP+  SK +I +FF G+
Sbjct:    4 EFIVRVRGLPWSCTKEEVLEFFSECSIIEGVSGIHFTTSKEGRPSGEAFIILDTEEDLKKALEKDRKYMGHRYIEVFKSNNTEMEWVLKHNSTGDVDTASDG---------------------TVRLRGLPFGCSKEEIVQFFSGL 128

HSP 2 Score: 55.8398 bits (133), Expect = 1.911e-7
Identity = 26/89 (29.21%), Postives = 52/89 (58.43%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            V   S+  ++LRG+P+  + ++I++F    G++    GI   +  +    GEAF++  S+E    A  +H + +G RYIE+F S+++++
Sbjct:   99 VDTASDGTVRLRGLPFGCSKEEIVQFFS--GLRIVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRSEI 185
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Mouse
Match: Grsf1 (G-rich RNA sequence binding factor 1 [Source:MGI Symbol;Acc:MGI:106479])

HSP 1 Score: 93.2041 bits (230), Expect = 6.648e-20
Identity = 48/145 (33.10%), Postives = 83/145 (57.24%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKAD---MLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y I+ +G+P+  T++D++ F  D  I+ S+ GIHF +++     G+A IE+ESE+D+ KA ++H  +MG+RY+EV+     D   ++K+ +  P  V  +G                     V+RL+GLPY+ ++ DI +FF G+
Sbjct:   32 YLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKPSPVLSDG---------------------VVRLRGLPYSCNEKDIVDFFAGL 155
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Mouse
Match: Grsf1 (G-rich RNA sequence binding factor 1 [Source:MGI Symbol;Acc:MGI:106479])

HSP 1 Score: 92.8189 bits (229), Expect = 2.733e-19
Identity = 48/145 (33.10%), Postives = 83/145 (57.24%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKAD---MLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y I+ +G+P+  T++D++ F  D  I+ S+ GIHF +++     G+A IE+ESE+D+ KA ++H  +MG+RY+EV+     D   ++K+ +  P  V  +G                     V+RL+GLPY+ ++ DI +FF G+
Sbjct:  149 YLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKPSPVLSDG---------------------VVRLRGLPYSCNEKDIVDFFAGL 272

HSP 2 Score: 50.0618 bits (118), Expect = 9.532e-6
Identity = 28/87 (32.18%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:   33 MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNI-EWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            +S+  ++LRG+PY     DI++F   + I      I F +  R   + GEA+++ E  E  N+A  +H + +G RYIE+F S + ++
Sbjct:  246 LSDGVVRLRGLPYSCNEKDIVDFFAGLNIVD----ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEV 328
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Mouse
Match: Hnrnpf (heterogeneous nuclear ribonucleoprotein F [Source:MGI Symbol;Acc:MGI:2138741])

HSP 1 Score: 85.5001 bits (210), Expect = 1.886e-18
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +KLRG+P+  +++D+  FL D  I     G+HF  ++   + GEAF+ELESE+D+  A  +  + MG RYIEVF S + +M    K                  S     +  N+ +V RL+GLP+  +K +I +FF G+
Sbjct:   11 YVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK-----------------HSGPNSADSANDGFV-RLRGLPFGCTKEEIVQFFSGL 134

HSP 2 Score: 60.4622 bits (145), Expect = 8.159e-10
Identity = 30/91 (32.97%), Postives = 55/91 (60.44%), Query Frame = 3 
Query:   45 WIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPV 317
            +++LRG+P+  T ++I++F    G++    GI  P+       GEAF++  S+E   KA  +H + +G RYIEVF S++ + +++  D P+
Sbjct:  112 FVRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE-VRSYSDPPL 199
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Mouse
Match: Hnrnpf (heterogeneous nuclear ribonucleoprotein F [Source:MGI Symbol;Acc:MGI:2138741])

HSP 1 Score: 85.1149 bits (209), Expect = 4.519e-18
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +KLRG+P+  +++D+  FL D  I     G+HF  ++   + GEAF+ELESE+D+  A  +  + MG RYIEVF S + +M    K                  S     +  N+ +V RL+GLP+  +K +I +FF G+
Sbjct:   11 YVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK-----------------HSGPNSADSANDGFV-RLRGLPFGCTKEEIVQFFSGL 134

HSP 2 Score: 60.077 bits (144), Expect = 1.397e-9
Identity = 30/91 (32.97%), Postives = 55/91 (60.44%), Query Frame = 3 
Query:   45 WIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPV 317
            +++LRG+P+  T ++I++F    G++    GI  P+       GEAF++  S+E   KA  +H + +G RYIEVF S++ + +++  D P+
Sbjct:  112 FVRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE-VRSYSDPPL 199
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Mouse
Match: Hnrnpf (heterogeneous nuclear ribonucleoprotein F [Source:MGI Symbol;Acc:MGI:2138741])

HSP 1 Score: 85.5001 bits (210), Expect = 4.173e-17
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +KLRG+P+  +++D+  FL D  I     G+HF  ++   + GEAF+ELESE+D+  A  +  + MG RYIEVF S + +M    K                  S     +  N+ +V RL+GLP+  +K +I +FF G+
Sbjct:   11 YVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK-----------------HSGPNSADSANDGFV-RLRGLPFGCTKEEIVQFFSGL 134

HSP 2 Score: 60.4622 bits (145), Expect = 4.459e-9
Identity = 30/91 (32.97%), Postives = 55/91 (60.44%), Query Frame = 3 
Query:   45 WIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPV 317
            +++LRG+P+  T ++I++F    G++    GI  P+       GEAF++  S+E   KA  +H + +G RYIEVF S++ + +++  D P+
Sbjct:  112 FVRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE-VRSYSDPPL 199

HSP 3 Score: 51.2174 bits (121), Expect = 4.159e-6
Identity = 24/63 (38.10%), Postives = 39/63 (61.90%), Query Frame = 1 
Query: 1477 IVNMKGVSISTRPDDVFRFFRPLVPLNISMKFM-GGAVEGEIDIEFANEDEAYSAMSKNRERL 1662
             V+M+G+      +D++ FF PL P+ + ++    G V GE D+EFA  +EA +AMSK+R  +
Sbjct:  290 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANM 352
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. UniProt/SwissProt
Match: sp|Q8C5Q4|GRSF1_MOUSE (G-rich sequence factor 1 OS=Mus musculus OX=10090 GN=Grsf1 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.912e-18
Identity = 48/145 (33.10%), Postives = 83/145 (57.24%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKAD---MLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y I+ +G+P+  T++D++ F  D  I+ S+ GIHF +++     G+A IE+ESE+D+ KA ++H  +MG+RY+EV+     D   ++K+ +  P  V  +G                     V+RL+GLPY+ ++ DI +FF G+
Sbjct:  149 YLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKPSPVLSDG---------------------VVRLRGLPYSCNEKDIVDFFAGL 272
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. UniProt/SwissProt
Match: sp|Q12849|GRSF1_HUMAN (G-rich sequence factor 1 OS=Homo sapiens OX=9606 GN=GRSF1 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.641e-17
Identity = 45/142 (31.69%), Postives = 80/142 (56.34%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + I+ +G+P+  TM+D++ F  D  I+  + GIHF +++     G+A IE+ESE+D+ KA ++H  +MG+RY+EV+     D+    K + V  +                   +  + V+RL+GLPY+ ++ DI +FF G+
Sbjct:  150 FLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSSP------------------VVNDGVVRLRGLPYSCNEKDIVDFFAGL 273
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. UniProt/SwissProt
Match: sp|Q794E4|HNRPF_RAT (Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 2.919e-16
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +KLRG+P+  +++D+  FL D  I     G+HF  ++   + GEAF+ELESE+D+  A  +  + MG RYIEVF S + +M    K                  S     +  N+ +V RL+GLP+  +K +I +FF G+
Sbjct:   11 YVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK-----------------HSGPNSADSANDGFV-RLRGLPFGCTKEEIVQFFSGL 134

HSP 2 Score: 60.4622 bits (145), Expect = 3.119e-8
Identity = 30/91 (32.97%), Postives = 55/91 (60.44%), Query Frame = 3 
Query:   45 WIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPV 317
            +++LRG+P+  T ++I++F    G++    GI  P+       GEAF++  S+E   KA  +H + +G RYIEVF S++ + +++  D P+
Sbjct:  112 FVRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE-VRSYSDPPL 199
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. UniProt/SwissProt
Match: sp|Q9Z2X1|HNRPF_MOUSE (Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 2.919e-16
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +KLRG+P+  +++D+  FL D  I     G+HF  ++   + GEAF+ELESE+D+  A  +  + MG RYIEVF S + +M    K                  S     +  N+ +V RL+GLP+  +K +I +FF G+
Sbjct:   11 YVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK-----------------HSGPNSADSANDGFV-RLRGLPFGCTKEEIVQFFSGL 134

HSP 2 Score: 60.4622 bits (145), Expect = 3.119e-8
Identity = 30/91 (32.97%), Postives = 55/91 (60.44%), Query Frame = 3 
Query:   45 WIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPV 317
            +++LRG+P+  T ++I++F    G++    GI  P+       GEAF++  S+E   KA  +H + +G RYIEVF S++ + +++  D P+
Sbjct:  112 FVRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE-VRSYSDPPL 199
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. UniProt/SwissProt
Match: sp|Q5E9J1|HNRPF_BOVIN (Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus OX=9913 GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.386e-15
Identity = 48/142 (33.80%), Postives = 76/142 (53.52%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + +KLRG+P+  +++D+  FL D  I     G+HF  ++   + GEAF+ELESE+D+  A  +  + MG RYIEVF S + +M    K                  S     +  N+ +V RL+GLP+  +K +I +FF G+
Sbjct:   11 FVVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK-----------------HSGPNSADTANDGFV-RLRGLPFGCTKEEIIQFFSGL 134

HSP 2 Score: 60.4622 bits (145), Expect = 2.823e-8
Identity = 31/91 (34.07%), Postives = 55/91 (60.44%), Query Frame = 3 
Query:   45 WIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPV 317
            +++LRG+P+  T ++II+F    G++    GI  P+       GEAF++  S+E   KA  +H + +G RYIEVF S++ + +++  D P+
Sbjct:  112 FVRLRGLPFGCTKEEIIQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE-VRSYSDPPL 199
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. TrEMBL
Match: A0A172RVP3 (Guanine-rich sequence binding factor 1-4 (Fragment) OS=Schmidtea mediterranea OX=79327 GN=GRSF1-4 PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 9.031e-117
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 
Query: 1291 RYIEVFDSNIEEANNEIRRQMEFNEMHVKRFEKSPPPSRGPRSMDDGIPYPDSQRFYGRIPVIVNMKGVSISTRPDDVFRFFRPLVPLNISMKFMGGAVEGEIDIEFANEDEAYSAMSKNRERLGGHSVFLSIIPMRDEFPYKPMGIPEYDRREREMSRGIPGPGRGFSDRDNFYPQSRYY 1833
            RYIEVFDSNIEEANNEIRRQMEFNEMHVKRFEKSPPPSRGPRSMDDGIPYPDSQRFYGRIPVIVNMKGVSISTRPDDVFRFFRPLVPLNISMKFMGGAVEGEIDIEFANEDEAYSAMSKNRERLGGHSVFLSIIPMRDEFPYKPMGIPEYDRREREMSRGIPGPGRGFSDRDNFYPQSRYY
Sbjct:  190 RYIEVFDSNIEEANNEIRRQMEFNEMHVKRFEKSPPPSRGPRSMDDGIPYPDSQRFYGRIPVIVNMKGVSISTRPDDVFRFFRPLVPLNISMKFMGGAVEGEIDIEFANEDEAYSAMSKNRERLGGHSVFLSIIPMRDEFPYKPMGIPEYDRREREMSRGIPGPGRGFSDRDNFYPQSRYY 370

HSP 2 Score: 274.633 bits (701), Expect = 2.122e-81
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 3 
Query:   33 MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKG KRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGRERPRRERSRSQVHERINENYVLRLKGLPYNASKTDIKEFFQG+
Sbjct:    1 MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGGKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGRERPRRERSRSQVHERINENYVLRLKGLPYNASKTDIKEFFQGL 145

HSP 3 Score: 99.7525 bits (247), Expect = 1.105e-18
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:  952 GLKILPDGMSILVDHNGRALGDAFVQFATYHDAKLAKERNGNKIAHR 1092
            GLKILPDGMSILVDHNGRALGDAFVQFATYHDAKLAKERNGNKIAHR
Sbjct:  144 GLKILPDGMSILVDHNGRALGDAFVQFATYHDAKLAKERNGNKIAHR 190
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. TrEMBL
Match: A0A172RVR9 (Guanine-rich sequence binding factor 1-3 (Fragment) OS=Schmidtea mediterranea OX=79327 GN=GRSF1-3 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 1.093e-63
Identity = 114/184 (61.96%), Postives = 142/184 (77.17%), Query Frame = 1 
Query: 1291 RYIEVFDSNIEEANNEIRRQMEFNEMHVKRFEKSPPPSRGPRSMDDGIPYPDSQRFYGRIPVIVNMKGVSISTRPDDVFRFFRPLVPLNISMKFMGGAVEGEIDIEFANEDEAYSAMSKNRERLGGHSVFLSIIPMRDEFPYK-PMGIPEYDR--REREMSRGIPGPGRGFSDRDNFYPQSRYY 1833
            RYIEVFDSNIEEAN EIRRQME N+M + +FEKSPP SRG R++DD +PY +S+R Y R P IVNM+GVS+S RPDD+FRFFRPL+P+ ISMKF     EGE D+EF NE++AYSA+S+NRERLG   V LS++ MRDE  Y   + +P YDR  R+RE+SRG+    RG+S+RD+ Y  SRYY
Sbjct:  190 RYIEVFDSNIEEANAEIRRQMEINDMRLSQFEKSPPRSRGVRAIDD-VPYVESRR-YARPPYIVNMRGVSLSVRPDDIFRFFRPLLPVAISMKFTSTGSEGEADVEFDNEEDAYSALSRNRERLGSSHVSLSMLSMRDELKYTDSIAVPNYDRRDRDRELSRGLTSSARGYSERDSLYTSSRYY 371

HSP 2 Score: 189.119 bits (479), Expect = 1.293e-49
Identity = 91/145 (62.76%), Postives = 115/145 (79.31%), Query Frame = 3 
Query:   33 MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            M+EYW+KLRG+PYRTTMDDI+EF+  + +KG KRGI+FPISQ+NIEWGEAFIE+  EEDL  AK++HN+H+GRRYIEVF+STK+DM  ACK + V  N   +   +R RSRS       +NYV+RLKGLP++ASK DIKEFF G+
Sbjct:    1 MAEYWVKLRGLPYRTTMDDIVEFMTGVKMKGGKRGINFPISQKNIEWGEAFIEVVDEEDLEAAKEKHNKHLGRRYIEVFTSTKSDMEAACKQVKVTENVKAKVASKRGRSRSPRERAPADNYVIRLKGLPFSASKIDIKEFFSGL 145

HSP 3 Score: 89.3521 bits (220), Expect = 3.362e-15
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 1 
Query:  952 GLKILPDGMSILVDHNGRALGDAFVQFATYHDAKLAKERNGNKIAHR 1092
            GLKILPDGMSILVD NGRALG+AFVQFA+YHDAKLAKER G KI HR
Sbjct:  144 GLKILPDGMSILVDENGRALGNAFVQFASYHDAKLAKERTGIKIGHR 190
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. TrEMBL
Match: A0A3P7RCP9 (RRM domain-containing protein OS=Dibothriocephalus latus OX=60516 GN=DILT_LOCUS18540 PE=4 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.280e-28
Identity = 65/145 (44.83%), Postives = 83/145 (57.24%), Query Frame = 3 
Query:   33 MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            MS   +++RG+PY  T DD+I F  D+ IKG KRGI FP        GEAFIELE+E++L KA   HN+HMGRRYIEVF S +A+M +A    P                     ER  + +V RL+GLPY+  K DI  FF G+
Sbjct:    1 MSVTILRIRGLPYSATADDVINFFKDVSIKGGKRGISFPQGPNGRSNGEAFIELENEDELEKAMAHHNEHMGRRYIEVFRSDEAEMKRAMGWQP---------------------ERNRKEHVARLRGLPYDTDKKDIFTFFSGL 124
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. TrEMBL
Match: A0A4S2MA08 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_001611 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.004e-23
Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 3 
Query:   15 FFLVSKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            +  VSKM+   +++RG+PY    DDII+F  D+ IK  KRGI FP        GEAFIELES++++ KA   HN+HMGRRYIEVF ST+ +M  A                     +   + R  + YV+RL+GLPY+  K +I  FF G+
Sbjct:   16 YLTVSKMA--VVRIRGLPYSARADDIIDFFKDVKIKNGKRGIFFPQGPNGRSNGEAFIELESKQEMEKATAHHNEHMGRRYIEVFPSTEQEMNNAM-------------------GKHDQYTRDRKEYVVRLRGLPYDTEKKEIYAFFNGL 145
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. TrEMBL
Match: Q5DGQ2 (Heterogeneous nuclear ribonucleoprotein H OS=Schistosoma japonicum OX=6182 GN=hnRNP-H' PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.553e-23
Identity = 55/145 (37.93%), Postives = 77/145 (53.10%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKF 476
            + +++RG+P+    DDII F  D  I+G KRGI+FP        GEAFIEL+S++D  KA   HN+HMGRRYIEVF S   ++  A    P +                         +V+RL+GLPY+  K +I  FF   +K+
Sbjct:    3 FVVRIRGLPFSANADDIINFFKDCTIRGGKRGIYFPQGPNGRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYIEVFDSCSEELNNAMGSRPFSSPN-------------------RREHVVRLRGLPYDTEKKEIYAFFNDTLKY 128
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Cavefish
Match: grsf1 (G-rich sequence factor 1 [Source:NCBI gene;Acc:103034094])

HSP 1 Score: 93.9745 bits (232), Expect = 1.697e-19
Identity = 53/158 (33.54%), Postives = 85/158 (53.80%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLN 515
            + I++RG+P+    +D+++F  +  I+G + GIH   ++     GEA IELE E DL+KA +RH Q++G RYIEV+  T  D     K   ++ +E+G                     V+ L+GLP+N S+ D+ EFF G+    D+ K    F+L+
Sbjct:  103 FVIRVRGLPWSCVAEDVVKFFSECQIRGGENGIHLMYNEVGEPNGEALIELEDEGDLSKAMERHGQYIGSRYIEVYKVTNQDAEAIMKGSDMSHSEDG---------------------VVCLRGLPFNCSEEDVLEFFSGL----DVVKDGVTFVLD 235

HSP 2 Score: 89.7373 bits (221), Expect = 4.068e-18
Identity = 50/158 (31.65%), Postives = 86/158 (54.43%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLN 515
            + ++++G+P+    +D++++  +  I+G   GIH   ++     GEA IELE E+DL+KA +RH Q++G RYIEV+  T  D+    K +  + +E+G                     V+ L+GLP+N S+ D+ EFF G+    D+ K    F+L+
Sbjct:  353 FVVRVKGLPWSCLAEDLVKYFSECQIRGGVNGIHLMYNKIGKPNGEALIELEDEKDLSKAMERHGQYIGSRYIEVYKVTNQDVEAIMKGLDRSHSEDG---------------------VVCLRGLPFNCSEEDVLEFFSGL----DVVKNGVTFVLD 485

HSP 3 Score: 63.929 bits (154), Expect = 4.182e-10
Identity = 40/140 (28.57%), Postives = 74/140 (52.86%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + LRG+P+  + +D++EF    G+   K G+ F +  R  + G A+++  ++E   +A  R   ++G+RYIEVF S ++D+  +       V++   +     +  + V E I+    + ++GLPY A+  DI  FF  I
Sbjct:  452 VCLRGLPFNCSEEDVLEFFS--GLDVVKNGVTFVLDNRGRKSGNAYVQFANQETAIEALQRDKGYIGKRYIEVFLSKRSDIEYS------RVSKEASDTTFHTQRINSVSEPIHH---VNMRGLPYQATAGDIVNFFSPI 580

HSP 4 Score: 53.5286 bits (127), Expect = 6.649e-7
Identity = 28/83 (33.73%), Postives = 50/83 (60.24%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGR--RYIEVFSSTKADM 290
            + LRG+P+  + +D++EF    G+   K G+ F +  R  + G+A+++  ++E  N+A  R    +G+  RYIEVF S K+D+
Sbjct:  202 VCLRGLPFNCSEEDVLEFFS--GLDVVKDGVTFVLDHRGRKSGDAYVQFANQEIANQALQRDKGFIGKRCRYIEVFPSKKSDI 282
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Cavefish
Match: grsf1 (G-rich sequence factor 1 [Source:NCBI gene;Acc:103034094])

HSP 1 Score: 93.5893 bits (231), Expect = 2.764e-19
Identity = 54/158 (34.18%), Postives = 85/158 (53.80%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLN 515
            + I++RG+P+    +D+++F  +  I+GS  GIH    +     GEAFIELE E DL+KA +RH +++G RYIEV+  T  D     K   ++ +E+G                     V+ L+GLP+N S+ D+ EFF G+    D+ K    F+L+
Sbjct:  103 FVIRVRGLPWSCVAEDVVKFFSECQIRGSVNGIHLMHDRNGKPNGEAFIELEDEVDLHKALERHMEYLGSRYIEVYKVTNQDAEAIMKGSDMSHSEDG---------------------VVCLRGLPFNCSEEDVLEFFSGL----DVVKDGVTFVLD 235

HSP 2 Score: 89.7373 bits (221), Expect = 3.633e-18
Identity = 50/158 (31.65%), Postives = 86/158 (54.43%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLN 515
            + ++++G+P+    +D++++  +  I+G   GIH   ++     GEA IELE E+DL+KA +RH Q++G RYIEV+  T  D+    K +  + +E+G                     V+ L+GLP+N S+ D+ EFF G+    D+ K    F+L+
Sbjct:  353 FVVRVKGLPWSCLAEDLVKYFSECQIRGGVNGIHLMYNKIGKPNGEALIELEDEKDLSKAMERHGQYIGSRYIEVYKVTNQDVEAIMKGLDRSHSEDG---------------------VVCLRGLPFNCSEEDVLEFFSGL----DVVKNGVTFVLD 485

HSP 3 Score: 64.3142 bits (155), Expect = 3.552e-10
Identity = 40/140 (28.57%), Postives = 74/140 (52.86%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + LRG+P+  + +D++EF    G+   K G+ F +  R  + G A+++  ++E   +A  R   ++G+RYIEVF S ++D+  +       V++   +     +  + V E I+    + ++GLPY A+  DI  FF  I
Sbjct:  452 VCLRGLPFNCSEEDVLEFFS--GLDVVKNGVTFVLDNRGRKSGNAYVQFANQETAIEALQRDKGYIGKRYIEVFLSKRSDIEYS------RVSKEASDTTFHTQRINSVSEPIHH---VNMRGLPYQATAGDIVNFFSPI 580

HSP 4 Score: 53.9138 bits (128), Expect = 6.051e-7
Identity = 28/83 (33.73%), Postives = 50/83 (60.24%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGR--RYIEVFSSTKADM 290
            + LRG+P+  + +D++EF    G+   K G+ F +  R  + G+A+++  ++E  N+A  R    +G+  RYIEVF S K+D+
Sbjct:  202 VCLRGLPFNCSEEDVLEFFS--GLDVVKDGVTFVLDHRGRKSGDAYVQFANQEIANQALQRDKGFIGKRCRYIEVFPSKKSDI 282
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Cavefish
Match: grsf1 (G-rich sequence factor 1 [Source:NCBI gene;Acc:103034094])

HSP 1 Score: 92.8189 bits (229), Expect = 4.020e-19
Identity = 54/158 (34.18%), Postives = 85/158 (53.80%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLN 515
            + I++RG+P+    +D+++F  +  I+GS  GIH    +     GEAFIELE E DL+KA +RH +++G RYIEV+  T  D     K   ++  ++G                     V+R+KGLP+N S+ D+ EFF G+    D+ K    F+L+
Sbjct:  103 FVIRVRGLPWSCVAEDVVKFFSECQIRGSVNGIHLMHDRNGKPNGEAFIELEDEVDLHKALERHMEYLGSRYIEVYEVTNRDAEAIMKGSDMSPIKDG---------------------VVRIKGLPFNCSEEDVLEFFSGL----DVVKDGVTFVLD 235

HSP 2 Score: 89.7373 bits (221), Expect = 3.963e-18
Identity = 50/158 (31.65%), Postives = 86/158 (54.43%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLN 515
            + ++++G+P+    +D++++  +  I+G   GIH   ++     GEA IELE E+DL+KA +RH Q++G RYIEV+  T  D+    K +  + +E+G                     V+ L+GLP+N S+ D+ EFF G+    D+ K    F+L+
Sbjct:  353 FVVRVKGLPWSCLAEDLVKYFSECQIRGGVNGIHLMYNKIGKPNGEALIELEDEKDLSKAMERHGQYIGSRYIEVYKVTNQDVEAIMKGLDRSHSEDG---------------------VVCLRGLPFNCSEEDVLEFFSGL----DVVKNGVTFVLD 485

HSP 3 Score: 64.3142 bits (155), Expect = 3.871e-10
Identity = 40/140 (28.57%), Postives = 74/140 (52.86%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + LRG+P+  + +D++EF    G+   K G+ F +  R  + G A+++  ++E   +A  R   ++G+RYIEVF S ++D+  +       V++   +     +  + V E I+    + ++GLPY A+  DI  FF  I
Sbjct:  452 VCLRGLPFNCSEEDVLEFFS--GLDVVKNGVTFVLDNRGRKSGNAYVQFANQETAIEALQRDKGYIGKRYIEVFLSKRSDIEYS------RVSKEASDTTFHTQRINSVSEPIHH---VNMRGLPYQATAGDIVNFFSPI 580

HSP 4 Score: 53.1434 bits (126), Expect = 8.675e-7
Identity = 27/91 (29.67%), Postives = 55/91 (60.44%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGR--RYIEVFSSTKADM 290
            +S + +  ++++G+P+  + +D++EF    G+   K G+ F +  R  + G+A+++  ++E  N+A  R    +G+  RYIEVF S K+D+
Sbjct:  194 MSPIKDGVVRIKGLPFNCSEEDVLEFFS--GLDVVKDGVTFVLDHRGRKSGDAYVQFANQEIANQALQRDKGFIGKRCRYIEVFPSKKSDI 282
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Cavefish
Match: grsf1 (G-rich sequence factor 1 [Source:NCBI gene;Acc:103034094])

HSP 1 Score: 92.8189 bits (229), Expect = 4.290e-19
Identity = 54/158 (34.18%), Postives = 85/158 (53.80%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLN 515
            + I++RG+P+    +D+++F  +  I+GS  GIH    +     GEAFIELE E DL+KA +RH +++G RYIEV+  T  D     K   ++  ++G                     V+R+KGLP+N S+ D+ EFF G+    D+ K    F+L+
Sbjct:  103 FVIRVRGLPWSCVAEDVVKFFSECQIRGSVNGIHLMHDRNGKPNGEAFIELEDEVDLHKALERHMEYLGSRYIEVYEVTNRDAEAIMKGSDMSPIKDG---------------------VVRIKGLPFNCSEEDVLEFFSGL----DVAKEGVTFVLD 235

HSP 2 Score: 89.7373 bits (221), Expect = 4.086e-18
Identity = 50/158 (31.65%), Postives = 86/158 (54.43%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLN 515
            + ++++G+P+    +D++++  +  I+G   GIH   ++     GEA IELE E+DL+KA +RH Q++G RYIEV+  T  D+    K +  + +E+G                     V+ L+GLP+N S+ D+ EFF G+    D+ K    F+L+
Sbjct:  351 FVVRVKGLPWSCLAEDLVKYFSECQIRGGVNGIHLMYNKIGKPNGEALIELEDEKDLSKAMERHGQYIGSRYIEVYKVTNQDVEAIMKGLDRSHSEDG---------------------VVCLRGLPFNCSEEDVLEFFSGL----DVVKNGVTFVLD 483

HSP 3 Score: 64.3142 bits (155), Expect = 3.863e-10
Identity = 40/140 (28.57%), Postives = 74/140 (52.86%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + LRG+P+  + +D++EF    G+   K G+ F +  R  + G A+++  ++E   +A  R   ++G+RYIEVF S ++D+  +       V++   +     +  + V E I+    + ++GLPY A+  DI  FF  I
Sbjct:  450 VCLRGLPFNCSEEDVLEFFS--GLDVVKNGVTFVLDNRGRKSGNAYVQFANQETAIEALQRDKGYIGKRYIEVFLSKRSDIEYS------RVSKEASDTTFHTQRINSVSEPIHH---VNMRGLPYQATAGDIVNFFSPI 578

HSP 4 Score: 59.3066 bits (142), Expect = 1.268e-8
Identity = 26/89 (29.21%), Postives = 56/89 (62.92%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            +S + +  ++++G+P+  + +D++EF    G+  +K G+ F +  R  + G+AF++  ++E  N+A  R   ++G+RYIEVF S  +++
Sbjct:  194 MSPIKDGVVRIKGLPFNCSEEDVLEFFS--GLDVAKEGVTFVLDHRGRKTGDAFVKFANQEIANRALQRDKDYIGKRYIEVFPSKNSEI 280
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Cavefish
Match: grsf1 (G-rich sequence factor 1 [Source:NCBI gene;Acc:103034094])

HSP 1 Score: 90.1225 bits (222), Expect = 1.696e-18
Identity = 50/158 (31.65%), Postives = 86/158 (54.43%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLN 515
            + ++++G+P+    +D++++  +  I+G   GIH   ++     GEA IELE E+DL+KA +RH Q++G RYIEV+  T  D+    K +  + +E+G                     V+ L+GLP+N S+ D+ EFF G+    D+ K    F+L+
Sbjct:  216 FVVRVKGLPWSCLAEDLVKYFSECQIRGGVNGIHLMYNKIGKPNGEALIELEDEKDLSKAMERHGQYIGSRYIEVYKVTNQDVEAIMKGLDRSHSEDG---------------------VVCLRGLPFNCSEEDVLEFFSGL----DVVKNGVTFVLD 348

HSP 2 Score: 68.1662 bits (165), Expect = 1.519e-11
Identity = 42/114 (36.84%), Postives = 60/114 (52.63%), Query Frame = 3 
Query:  174 GEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLN 515
            GEA IELE E DL+KA +RH Q++G RYIEV+  T  D     K   ++ +E+G                     V+ L+GLP+N S+ D+ EFF G+    D+ K    F+L+
Sbjct:   10 GEALIELEDEGDLSKAMERHGQYIGSRYIEVYKVTNQDAEAIMKGSDMSHSEDG---------------------VVCLRGLPFNCSEEDVLEFFSGL----DVVKDGVTFVLD 98

HSP 3 Score: 64.3142 bits (155), Expect = 2.922e-10
Identity = 40/140 (28.57%), Postives = 74/140 (52.86%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + LRG+P+  + +D++EF    G+   K G+ F +  R  + G A+++  ++E   +A  R   ++G+RYIEVF S ++D+  +       V++   +     +  + V E I+    + ++GLPY A+  DI  FF  I
Sbjct:  315 VCLRGLPFNCSEEDVLEFFS--GLDVVKNGVTFVLDNRGRKSGNAYVQFANQETAIEALQRDKGYIGKRYIEVFLSKRSDIEYS------RVSKEASDTTFHTQRINSVSEPIHH---VNMRGLPYQATAGDIVNFFSPI 443

HSP 4 Score: 53.9138 bits (128), Expect = 4.302e-7
Identity = 28/83 (33.73%), Postives = 50/83 (60.24%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGR--RYIEVFSSTKADM 290
            + LRG+P+  + +D++EF    G+   K G+ F +  R  + G+A+++  ++E  N+A  R    +G+  RYIEVF S K+D+
Sbjct:   65 VCLRGLPFNCSEEDVLEFFS--GLDVVKDGVTFVLDHRGRKSGDAYVQFANQEIANQALQRDKGFIGKRCRYIEVFPSKKSDI 145
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Sea Lamprey
Match: HNRNPH1 (heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041])

HSP 1 Score: 96.2857 bits (238), Expect = 3.390e-21
Identity = 52/143 (36.36%), Postives = 83/143 (58.04%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDM-PVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            + ++LRG+P+  + +++I+FL    I  S  G+HF  S+     GEAF+ELESEEDL++A +R +++MG RYIEVF S  +++        PVA+ E+G                      +RL+GLP++ SK +I +FF G+
Sbjct:   11 FVVRLRGLPWSCSSEEVIKFLSGCAIVNSADGVHFTNSREGRPSGEAFVELESEEDLDRALERDHKNMGHRYIEVFRSKLSELNWVLNQQNPVALPESGEAEG-----------------CVRLRGLPFSCSKEEIAQFFTGL 136

HSP 2 Score: 62.7734 bits (151), Expect = 1.527e-10
Identity = 32/96 (33.33%), Postives = 55/96 (57.29%), Query Frame = 3 
Query:   27 SKMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMP 314
            S  +E  ++LRG+P+  + ++I +F    G++    GI  P+  +    GEAF++  S+E   KA  +H + +G RYIEVF S + + ++A  D P
Sbjct:  108 SGEAEGCVRLRGLPFSCSKEEIAQFF--TGLEIVPNGITLPVDYQGRSTGEAFVQFASQEAAEKALGKHKERIGHRYIEVFKSNRGE-VRAYYDPP 200

HSP 3 Score: 49.2914 bits (116), Expect = 2.875e-6
Identity = 21/47 (44.68%), Postives = 35/47 (74.47%), Query Frame = 1 
Query:  952 GLKILPDGMSILVDHNGRALGDAFVQFATYHDAKLAKERNGNKIAHR 1092
            GL+I+P+G+++ VD+ GR+ G+AFVQFA+   A+ A  ++  +I HR
Sbjct:  135 GLEIVPNGITLPVDYQGRSTGEAFVQFASQEAAEKALGKHKERIGHR 181
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Sea Lamprey
Match: esrp2 (epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:572992])

HSP 1 Score: 64.3142 bits (155), Expect = 6.859e-11
Identity = 44/140 (31.43%), Postives = 73/140 (52.14%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHF---PISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFF 458
            +++RG+P++++  DI  F   + I  +K GI     P+ +RN   GEA + L+ E+  + A  RH  HMG RYIEV+ S+  +  K      +AV  +           SQ   R  +  ++R++GLP+ A+  D+  FF
Sbjct:  137 VRVRGLPWQSSDQDIALFFKGLNI--AKGGIALCLNPLGRRN---GEALVMLQDEQQRDLALSRHKHHMGSRYIEVYRSSAEEFSK------IAVGAS--------SEVSQFLAREGQ-VIVRMRGLPFAAAPDDVLAFF 256

HSP 2 Score: 54.6842 bits (130), Expect = 6.339e-8
Identity = 40/180 (22.22%), Postives = 75/180 (41.67%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFL-PDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKAD------------MLKACKDMPVA------VNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEF---FQGIIKFEDMFKLF 497
            +++  +  +++RG+P+    DD++ F      +   ++G+ F         G+AF+    EE    A  +H   +G+RYIE+F ST A+            +L     +P                         +     +   +RL+GLPY+AS  +I +F   F G I+ + +  +F
Sbjct:  230 LAREGQVIVRMRGLPFAAAPDDVLAFFGAACPVTAGRQGLLFVRHPDGRPTGDAFVLFAGEECAAAALAKHRHMLGKRYIELFRSTAAELQQVLNRVMSTPLLPVVPALPSPFPGGPLCPSGPLTPGGPLTPGGPLTPGGAQRDCVRLRGLPYSASIEEILDFLGEFAGDIRPQGVHMVF 409

HSP 3 Score: 54.6842 bits (130), Expect = 6.561e-8
Identity = 25/83 (30.12%), Postives = 48/83 (57.83%), Query Frame = 3 
Query:   45 WIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDR-HNQHMGRRYIEVFSSTKADM 290
             ++LRG+PY  ++++I++FL +       +G+H   +Q+    G+AFI++   E    A  R H + +  RY+EVF+ +  +M
Sbjct:  374 CVRLRGLPYSASIEEILDFLGEFAGDIRPQGVHMVFNQQGRPSGDAFIQMRGAERAALAAQRCHRRSLRERYVEVFACSADEM 456
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Nematostella
Match: EDO37823 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEP3])

HSP 1 Score: 83.5741 bits (205), Expect = 3.241e-17
Identity = 48/145 (33.10%), Postives = 74/145 (51.03%), Query Frame = 3 
Query:   36 SEYWIKLRGMPYRTTMDDIIEFLPDIGI-KGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            +E  ++ RG+P+  T +DI  F  D  I  G + G+HF         GE F++  SE+D+ KA + +N+HMG+RYIEVF S   +M    K M    +                    ++  V++L+GLPY  SK +I +FF G+
Sbjct:    3 NECVVRARGLPWSATPEDIQNFFKDCNIVGGPQNGVHFTFGIDGRPSGECFVQFVSEKDVEKALEMNNEHMGKRYIEVFRSKAEEMEWVIKRMGPPSDR-------------------DQEAVVKLRGLPYGCSKEEIAQFFTGL 128

HSP 2 Score: 65.0846 bits (157), Expect = 3.526e-11
Identity = 42/166 (25.30%), Postives = 71/166 (42.77%), Query Frame = 3 
Query:   39 EYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERI--------------------------NENYVLRLKGLPYNASKTDIKEFF 458
            E  +KLRG+PY  + ++I +F    G++    GI   + +     GE F+E  S E   +A  +H + +G RYIE+F S+K+D+    K  P+     G               R                           +  + + ++GLP+ A +TD+K+FF
Sbjct:  104 EAVVKLRGLPYGCSKEEIAQFF--TGLEIVPNGITITLDEEGKTTGEGFVEFASPEIAGQAMQKHKEKIGHRYIEIFKSSKSDIKYVLKPKPLMSTRPGPYDRMGGPFGGPRFGRGGGDQFERRGGFGGGRSGGTGGFSGVSSTGHTVAMRGLPFGAKETDVKQFF 267
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Nematostella
Match: EDO47286 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RMK7])

HSP 1 Score: 70.4774 bits (171), Expect = 5.430e-13
Identity = 38/142 (26.76%), Postives = 69/142 (48.59%), Query Frame = 3 
Query:   33 MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFF 458
            + +  ++ RG+P++ +  D+  F   + I   + GI F ++ +    GEAFI  E+ +  + A  RH  H+G RYIEV+ ++  D L+  + M +A N                    N   ++R++GLP++    D+  FF
Sbjct:    8 LDDTVLRARGLPWQASDQDVANFFRGLNIP--RGGIAFCLNMQGRRNGEAFIRFENGDHRDLALRRHKMHLGTRYIEVYKASAQDFLRIVRGMSIAAN----------------FVSTNAEVIIRMRGLPFSTKAADVVRFF 131

HSP 2 Score: 60.8474 bits (146), Expect = 8.075e-10
Identity = 40/163 (24.54%), Postives = 77/163 (47.24%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFLPD-IGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDM--------PVAVNENGXXXXX--------XXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQ 461
            VS  +E  I++RG+P+ T   D++ F  D + +   + GI     +     G+AF+  E+EE    A  +H + +G RY+E+F S+++++ +    +        P+A+  N   +                  +   N    LRL+GLP++A+  D+ +F +
Sbjct:  105 VSTNAEVIIRMRGLPFSTKAADVVRFFGDDVPVYRGEGGILMVRGRNGKATGDAFVLFETEEHGRAALKKHREVLGSRYVELFRSSQSEVQQVLSSLSLFMMGVPPLAMLPNPLPQHPPFHPPMFLPGPVPYAANGGSNAKDCLRLRGLPFSATVQDVLDFLK 267

HSP 3 Score: 58.9214 bits (141), Expect = 3.249e-9
Identity = 26/83 (31.33%), Postives = 48/83 (57.83%), Query Frame = 3 
Query:   45 WIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEE-DLNKAKDRHNQHMGRRYIEVFSSTKADM 290
             ++LRG+P+  T+ D+++FL +     +  G+H   + +    G+A+++L S +     A + H  HMG RYIEVF  + +D+
Sbjct:  247 CLRLRGLPFSATVQDVLDFLKEHAAYVAPGGVHMVYNTQGRPSGDAYVQLLSPDFAAAAANELHKHHMGERYIEVFPCSNSDI 329
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Nematostella
Match: EDO47487 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RLV0])

HSP 1 Score: 50.8322 bits (120), Expect = 2.367e-6
Identity = 39/143 (27.27%), Postives = 68/143 (47.55%), Query Frame = 3 
Query:   33 MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQ 461
             + +  K+RG+P++     I+EF   +        I F ++++    G AF++  S+ DL KA  R+  ++  RYIE+F  T  D      +      E    R  +E+   +  E I E+  L L+ L Y+ S+ DI+  F+
Sbjct:  250 TTPWTCKMRGLPFKAKDKHILEFFSPL----KPVAIRFVMNKKGQPSGCAFVDFSSKSDLEKALKRNKDYLQGRYIELFKDTNRDF----DNNKQGDGEKSWMRKLQEKGDDEEEEPIGESGRLFLRNLAYSCSEEDIQHLFE 384
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Medaka
Match: hnrnph1 (heterogeneous nuclear ribonucleoprotein H1 [Source:NCBI gene;Acc:101155609])

HSP 1 Score: 83.1889 bits (204), Expect = 3.670e-18
Identity = 48/165 (29.09%), Postives = 77/165 (46.67%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLFFYFLLNIIIGNWM 536
            Y +++RG+P+  ++D++  F     I  +  GIHF  ++     GEAF+E+E+EEDL  A  +  + MG RY+EVF S   +M    K       E                     + ++RL+GLP+  SK +I +FF G +K   +  L      N     W+
Sbjct:    6 YVVRIRGLPWSCSVDEVQRFFSGCKILNNGSGIHFTYTREGRPSGEAFVEMETEEDLKVAVKKDRETMGHRYVEVFKSNNVEMDWVMKHTGPNCPETAG------------------DGLVRLRGLPFGCSKEEIVQFFSGTLKSSRVVVLRCGLTTNPRESPWV 152
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Medaka
Match: grsf1 (heterogeneous nuclear ribonucleoprotein H2 [Source:NCBI gene;Acc:101160053])

HSP 1 Score: 83.9593 bits (206), Expect = 8.116e-17
Identity = 43/147 (29.25%), Postives = 78/147 (53.06%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFED 482
            + +++RG+P+  T+ +++ F  D  I+  +RG+H  + +     G AFIE+E EED++KA ++H Q++G RY+EV   T +D     + +     E+G                     V+ L+GLP++ ++ DI  FF G+   E+
Sbjct:   86 FIVQVRGLPWSCTVHELLHFFSDCRIRDGERGVHLTLDRLGRPSGRAFIEMEHEEDVSKALEKHRQYLGPRYVEVSEVTNSDAETILQHVAPPAAEDG---------------------VVMLRGLPFSCTQDDILLFFSGLDVVEN 211

HSP 2 Score: 68.1662 bits (165), Expect = 1.231e-11
Identity = 41/145 (28.28%), Postives = 66/145 (45.52%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDM----PVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGII 470
            + LRG+P+  T DDI+ F    G+   + GI      R    GEAF++  S+E   KA  +H + MG RY+EVF S  +++    K      P + +                      ++ + ++GLP+ AS  DI +FF   +
Sbjct:  185 VMLRGLPFSCTQDDILLFF--SGLDVVENGITMVTDGRGRNSGEAFVQFTSQEVAGKALQKHRELMGHRYVEVFPSRSSEIRSTWKRRSSLPPQSASPPAGRPASAPHRAVSPQSSEANSHFIHMRGLPFQASGEDIVKFFSPYV 327
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Medaka
Match: grsf1 (heterogeneous nuclear ribonucleoprotein H2 [Source:NCBI gene;Acc:101160053])

HSP 1 Score: 83.5741 bits (205), Expect = 1.046e-16
Identity = 43/147 (29.25%), Postives = 78/147 (53.06%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFED 482
            + +++RG+P+  T+ +++ F  D  I+  +RG+H  + +     G AFIE+E EED++KA ++H Q++G RY+EV   T +D     + +     E+G                     V+ L+GLP++ ++ DI  FF G+   E+
Sbjct:   86 FIVQVRGLPWSCTVHELLHFFSDCRIRDGERGVHLTLDRLGRPSGRAFIEMEHEEDVSKALEKHRQYLGPRYVEVSEVTNSDAETILQHVAPPAAEDG---------------------VVMLRGLPFSCTQDDILLFFSGLDVVEN 211

HSP 2 Score: 63.5438 bits (153), Expect = 3.220e-10
Identity = 39/137 (28.47%), Postives = 62/137 (45.26%), Query Frame = 3 
Query:   48 IKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKD----MPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDI 446
            + LRG+P+  T DDI+ F    G+   + GI      R    GEAF++  S+E   KA  +H + MG RY+EVF S  +++    K      P + +                      ++ + ++GLP+ AS  DI
Sbjct:  185 VMLRGLPFSCTQDDILLFF--SGLDVVENGITMVTDGRGRNSGEAFVQFTSQEVAGKALQKHRELMGHRYVEVFPSRSSEIRSTWKRRSSLPPQSASPPAGRPASAPHRAVSPQSSEANSHFIHMRGLPFQASGEDI 319
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Medaka
Match: HNRNPH3 (heterogeneous nuclear ribonucleoprotein H [Source:NCBI gene;Acc:101157356])

HSP 1 Score: 80.4925 bits (197), Expect = 1.248e-15
Identity = 46/145 (31.72%), Postives = 74/145 (51.03%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM---LKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +++RG+P+  T +++  F  D  I G   G+ F  S+     GEAF+EL++ ED   A  +  ++MG RYIEVF S +++M   LK  ++ P   +                        +LRL+GLP+  SK +I +FF G+
Sbjct:   21 YVVRIRGLPWSCTQEEVASFFSDCDIMGKINGVCFTYSKEGRPSGEAFLELKTAEDFKNALAKDRKYMGHRYIEVFKSNRSEMDWVLK--RNGPADYDSC-------------------SGCMLRLRGLPFGCSKEEIVQFFSGL 144

HSP 2 Score: 60.4622 bits (145), Expect = 3.849e-9
Identity = 30/95 (31.58%), Postives = 56/95 (58.95%), Query Frame = 3 
Query:   30 KMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMP 314
              S   ++LRG+P+  + ++I++F    G++    GI  P+  +    GEAF++  S+E   KA  +H + +G RYIE+F S++ + ++A  D+P
Sbjct:  117 SCSGCMLRLRGLPFGCSKEEIVQFFS--GLRIVPNGITLPVDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNE-IRAYYDVP 208
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Medaka
Match: HNRNPH3 (heterogeneous nuclear ribonucleoprotein H [Source:NCBI gene;Acc:101157356])

HSP 1 Score: 80.4925 bits (197), Expect = 1.323e-15
Identity = 46/145 (31.72%), Postives = 74/145 (51.03%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM---LKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            Y +++RG+P+  T +++  F  D  I G   G+ F  S+     GEAF+EL++ ED   A  +  ++MG RYIEVF S +++M   LK  ++ P   +                        +LRL+GLP+  SK +I +FF G+
Sbjct:    8 YVVRIRGLPWSCTQEEVASFFSDCDIMGKINGVCFTYSKEGRPSGEAFLELKTAEDFKNALAKDRKYMGHRYIEVFKSNRSEMDWVLK--RNGPADYDSC-------------------SGCMLRLRGLPFGCSKEEIVQFFSGL 131

HSP 2 Score: 60.4622 bits (145), Expect = 3.615e-9
Identity = 30/95 (31.58%), Postives = 56/95 (58.95%), Query Frame = 3 
Query:   30 KMSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMP 314
              S   ++LRG+P+  + ++I++F    G++    GI  P+  +    GEAF++  S+E   KA  +H + +G RYIE+F S++ + ++A  D+P
Sbjct:  104 SCSGCMLRLRGLPFGCSKEEIVQFFS--GLRIVPNGITLPVDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNE-IRAYYDVP 195
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Planmine SMEST
Match: SMESG000055008.1 (SMESG000055008.1)

HSP 1 Score: 367.081 bits (941), Expect = 2.512e-120
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 
Query: 1291 RYIEVFDSNIEEANNEIRRQMEFNEMHVKRFEKSPPPSRGPRSMDDGIPYPDSQRFYGRIPVIVNMKGVSISTRPDDVFRFFRPLVPLNISMKFMGGAVEGEIDIEFANEDEAYSAMSKNRERLGGHSVFLSIIPMRDEFPYKPMGIPEYDRREREMSRGIPGPGRGFSDRDNFYPQSRYY 1833
            RYIEVFDSNIEEANNEIRRQMEFNEMHVKRFEKSPPPSRGPRSMDDGIPYPDSQRFYGRIPVIVNMKGVSISTRPDDVFRFFRPLVPLNISMKFMGGAVEGEIDIEFANEDEAYSAMSKNRERLGGHSVFLSIIPMRDEFPYKPMGIPEYDRREREMSRGIPGPGRGFSDRDNFYPQSRYY
Sbjct:  190 RYIEVFDSNIEEANNEIRRQMEFNEMHVKRFEKSPPPSRGPRSMDDGIPYPDSQRFYGRIPVIVNMKGVSISTRPDDVFRFFRPLVPLNISMKFMGGAVEGEIDIEFANEDEAYSAMSKNRERLGGHSVFLSIIPMRDEFPYKPMGIPEYDRREREMSRGIPGPGRGFSDRDNFYPQSRYY 370

HSP 2 Score: 274.633 bits (701), Expect = 5.901e-85
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 3 
Query:   33 MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGI 467
            MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKG KRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGRERPRRERSRSQVHERINENYVLRLKGLPYNASKTDIKEFFQG+
Sbjct:    1 MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGGKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGRERPRRERSRSQVHERINENYVLRLKGLPYNASKTDIKEFFQGL 145

HSP 3 Score: 99.7525 bits (247), Expect = 3.074e-22
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:  952 GLKILPDGMSILVDHNGRALGDAFVQFATYHDAKLAKERNGNKIAHR 1092
            GLKILPDGMSILVDHNGRALGDAFVQFATYHDAKLAKERNGNKIAHR
Sbjct:  144 GLKILPDGMSILVDHNGRALGDAFVQFATYHDAKLAKERNGNKIAHR 190
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Planmine SMEST
Match: SMESG000009582.1 (SMESG000009582.1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.999e-11
Identity = 43/152 (28.29%), Postives = 77/152 (50.66%), Query Frame = 3 
Query:   42 YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFEDMFKLF 497
            +++KLRG+PY  T  DI+ FL  + I  ++ GI   ++      GEA ++L++E +LN   + + ++MG R+IEVF +T+ D                           ++  ++++   +RL+GLPY+ +K DI  FF  ++   D   L 
Sbjct:    3 HFLKLRGLPYSATETDILTFLSGLPI-WTESGILITLNDDGRPSGEALVKLDTEINLNDLTEYNGKYMGTRFIEVFPATQKDWFG-----------------------EEMRMKMSDMTYVRLRGLPYDVTKEDIFIFFNRLMISRDGVGLL 130

HSP 2 Score: 62.003 bits (149), Expect = 6.259e-10
Identity = 33/91 (36.26%), Postives = 55/91 (60.44%), Query Frame = 3 
Query:   30 KMSE-YWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKA 299
            KMS+  +++LRG+PY  T +DI  F   + I  S+ G+   +   ++  GEAF++  + ED N A  RHNQ +  RYIE++ S+  ++ +A
Sbjct:   92 KMSDMTYVRLRGLPYDVTKEDIFIFFNRLMI--SRDGVGLLVGPDDVPTGEAFVQFMTREDANLALQRHNQCIRSRYIEIYKSSLTEVYRA 180
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Planmine SMEST
Match: SMESG000023329.1 (SMESG000023329.1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.627e-10
Identity = 45/140 (32.14%), Postives = 69/140 (49.29%), Query Frame = 3 
Query:   39 EYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDIKEFF 458
            E  ++ RG+P++ T  DI +F   + I+  K GI   +S+     GEA I  +S E  + A  +H  HMG+RYIEV+ +T  D ++          E      +R    SQ         ++R++GLPY A+   I EFF
Sbjct:  230 EVVVRARGLPWQATDSDINKFFRGLNIE--KGGIALVLSKVGRRNGEALIRFKSREHRDMALRKHKHHMGQRYIEVYMATGRDFIQVAG----GDTEEAEVFLQRITKPSQT--------LIRMRGLPYTATANQILEFF 355

HSP 2 Score: 59.6918 bits (143), Expect = 8.059e-9
Identity = 31/91 (34.07%), Postives = 54/91 (59.34%), Query Frame = 3 
Query:   24 VSKMSEYWIKLRGMPYRTTMDDIIEFLP--DIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM 290
            ++K S+  I++RG+PY  T + I+EF    +  ++  + GI F   +     G+AF+  E+EE   +A   H +++G RYIE+F ST A++
Sbjct:  329 ITKPSQTLIRMRGLPYTATANQILEFFTSTNCPVEFGEDGILFVNHKDGRATGDAFVIFENEEVAEEALKSHRENIGNRYIELFKSTPAEV 419
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Planmine SMEST
Match: SMESG000023329.1 (SMESG000023329.1)

HSP 1 Score: 60.077 bits (144), Expect = 2.900e-9
Identity = 42/136 (30.88%), Postives = 66/136 (48.53%), Query Frame = 3 
Query:   39 EYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNENGXXXXXXXXXXXQVHERINENYVLRLKGLPYNASKTDI 446
            E  ++ RG+P++ T  DI +F   + I+  K GI   +S+     GEA I  +S E  + A  +H  HMG+RYIEV+ +T  D ++          E      +R    SQ         ++R++GLPY A+   I
Sbjct:  230 EVVVRARGLPWQATDSDINKFFRGLNIE--KGGIALVLSKVGRRNGEALIRFKSREHRDMALRKHKHHMGQRYIEVYMATGRDFIQVAG----GDTEEAEVFLQRITKPSQT--------LIRMRGLPYTATANQI 351
[Close]
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Planmine SMEST
Match: SMESG000044612.1 (SMESG000044612.1)

HSP 1 Score: 51.9878 bits (123), Expect = 1.819e-6
Identity = 34/116 (29.31%), Postives = 62/116 (53.45%), Query Frame = 3 
Query:    3 IKV*FFLVSKMSEYWIKLRGMPYRTTMDDIIEFLP--DIGIKGSKRGIHFPISQRNIEW-GEAFIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADM---LKACKDMPVAVNEN 332
            +KV    +    +  I+++G+PY  T  +I+ F    D+ ++ S  GI F + + + E  G+AF+  E+E    KAK+     +G RY+E+F ST  +M   + A +++P    +N
Sbjct:  360 VKVYLEQIETQDQILIRIKGLPYTVTKPEILNFFKSNDVEVQFSHNGI-FLVQKSSGELNGDAFVIFENEGVAQKAKNLKGMTIGNRYMEIFYSTPPEMNQVISAAQNIPFKPKQN 474
The following BLAST results are available for this feature:
BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
GRSF12.476e-1831.69G-rich RNA sequence binding factor 1 [Source:HGNC ... [more]
GRSF12.556e-1831.69G-rich RNA sequence binding factor 1 [Source:HGNC ... [more]
GRSF15.499e-1831.69G-rich RNA sequence binding factor 1 [Source:HGNC ... [more]
GRSF16.420e-1831.69G-rich RNA sequence binding factor 1 [Source:HGNC ... [more]
HNRNPH12.428e-1732.39heterogeneous nuclear ribonucleoprotein H1 [Source... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
hrpf-11.318e-939.76HnRNP F homolog [Source:UniProtKB/TrEMBL;Acc:H2KZ... [more]
sym-22.446e-928.10RNA-binding protein sym-2 [Source:UniProtKB/Swiss... [more]
sym-22.446e-928.10RNA-binding protein sym-2 [Source:UniProtKB/Swiss... [more]
hrpf-12.538e-939.76HnRNP F homolog [Source:UniProtKB/TrEMBL;Acc:H2KZ... [more]
sym-27.231e-928.10RNA-binding protein sym-2 [Source:UniProtKB/Swiss... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
glo6.100e-1830.41gene:FBgn0259139 transcript:FBtr0089918[more]
glo1.245e-1430.34gene:FBgn0259139 transcript:FBtr0089917[more]
glo1.245e-1430.34gene:FBgn0259139 transcript:FBtr0089919[more]
fus1.177e-928.47gene:FBgn0023441 transcript:FBtr0087343[more]
fus1.177e-928.47gene:FBgn0023441 transcript:FBtr0087344[more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
hnrnph34.535e-1933.10heterogeneous nuclear ribonucleoprotein H3 (2H9) [... [more]
grsf11.513e-1733.33G-rich RNA sequence binding factor 1 [Source:ZFIN;... [more]
hnrnph31.090e-1633.10heterogeneous nuclear ribonucleoprotein H3 (2H9) [... [more]
hnrnph31.090e-1633.10heterogeneous nuclear ribonucleoprotein H3 (2H9) [... [more]
hnrnph31.090e-1633.10heterogeneous nuclear ribonucleoprotein H3 (2H9) [... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
syngap16.612e-1831.69synaptic Ras GTPase activating protein 1 [Source:X... [more]
syngap11.602e-1732.00synaptic Ras GTPase activating protein 1 [Source:X... [more]
cdc373.634e-1734.25cell division cycle 37 [Source:Xenbase;Acc:XB-GENE... [more]
cdc373.804e-1734.25cell division cycle 37 [Source:Xenbase;Acc:XB-GENE... [more]
cdc375.551e-1734.25cell division cycle 37 [Source:Xenbase;Acc:XB-GENE... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Grsf16.648e-2033.10G-rich RNA sequence binding factor 1 [Source:MGI S... [more]
Grsf12.733e-1933.10G-rich RNA sequence binding factor 1 [Source:MGI S... [more]
Hnrnpf1.886e-1834.51heterogeneous nuclear ribonucleoprotein F [Source:... [more]
Hnrnpf4.519e-1834.51heterogeneous nuclear ribonucleoprotein F [Source:... [more]
Hnrnpf4.173e-1734.51heterogeneous nuclear ribonucleoprotein F [Source:... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q8C5Q4|GRSF1_MOUSE1.912e-1833.10G-rich sequence factor 1 OS=Mus musculus OX=10090 ... [more]
sp|Q12849|GRSF1_HUMAN2.641e-1731.69G-rich sequence factor 1 OS=Homo sapiens OX=9606 G... [more]
sp|Q794E4|HNRPF_RAT2.919e-1634.51Heterogeneous nuclear ribonucleoprotein F OS=Rattu... [more]
sp|Q9Z2X1|HNRPF_MOUSE2.919e-1634.51Heterogeneous nuclear ribonucleoprotein F OS=Mus m... [more]
sp|Q5E9J1|HNRPF_BOVIN1.386e-1533.80Heterogeneous nuclear ribonucleoprotein F OS=Bos t... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A172RVP39.031e-117100.00Guanine-rich sequence binding factor 1-4 (Fragment... [more]
A0A172RVR91.093e-6361.96Guanine-rich sequence binding factor 1-3 (Fragment... [more]
A0A3P7RCP98.280e-2844.83RRM domain-containing protein OS=Dibothriocephalus... [more]
A0A4S2MA084.004e-2341.72Uncharacterized protein OS=Opisthorchis felineus O... [more]
Q5DGQ24.553e-2337.93Heterogeneous nuclear ribonucleoprotein H OS=Schis... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
grsf11.697e-1933.54G-rich sequence factor 1 [Source:NCBI gene;Acc:103... [more]
grsf12.764e-1934.18G-rich sequence factor 1 [Source:NCBI gene;Acc:103... [more]
grsf14.020e-1934.18G-rich sequence factor 1 [Source:NCBI gene;Acc:103... [more]
grsf14.290e-1934.18G-rich sequence factor 1 [Source:NCBI gene;Acc:103... [more]
grsf11.696e-1831.65G-rich sequence factor 1 [Source:NCBI gene;Acc:103... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
HNRNPH13.390e-2136.36heterogeneous nuclear ribonucleoprotein H1 [Source... [more]
esrp26.859e-1131.43epithelial splicing regulatory protein 2 [Source:N... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 3
Match NameE-valueIdentityDescription
EDO378233.241e-1733.10Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO472865.430e-1326.76Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO474872.367e-627.27Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
hnrnph13.670e-1829.09heterogeneous nuclear ribonucleoprotein H1 [Source... [more]
grsf18.116e-1729.25heterogeneous nuclear ribonucleoprotein H2 [Source... [more]
grsf11.046e-1629.25heterogeneous nuclear ribonucleoprotein H2 [Source... [more]
HNRNPH31.248e-1531.72heterogeneous nuclear ribonucleoprotein H [Source:... [more]
HNRNPH31.323e-1531.72heterogeneous nuclear ribonucleoprotein H [Source:... [more]
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BLAST of Heterogeneous nuclear ribonucleoprotein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000055008.12.512e-120100.00SMESG000055008.1[more]
SMESG000009582.12.999e-1128.29SMESG000009582.1[more]
SMESG000023329.11.627e-1032.14SMESG000023329.1[more]
SMESG000023329.12.900e-930.88SMESG000023329.1[more]
SMESG000044612.11.819e-629.31SMESG000044612.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30001933 ID=SMED30001933|Name=Heterogeneous nuclear ribonucleoprotein|organism=Schmidtea mediterranea sexual|type=transcript|length=2345bp
ACATAAAGGTTTAATTTTTTTTGGTATCCAAGATGTCTGAATATTGGATA
AAGCTTAGAGGCATGCCATATCGCACTACAATGGACGATATAATCGAATT
TTTACCTGACATTGGCATTAAAGGAAGCAAGAGAGGAATTCATTTCCCTA
TTAGTCAAAGAAATATTGAATGGGGCGAAGCTTTTATTGAATTGGAGTCG
GAAGAAGATTTAAATAAAGCTAAGGACCGTCATAATCAACATATGGGTCG
AAGATACATTGAAGTATTCTCTTCAACTAAAGCTGACATGCTTAAAGCAT
GTAAAGACATGCCAGTTGCCGTGAATGAAAACGGCCGAGAAAGGCCACGA
AGAGAAAGATCAAGAAGCCAAGTTCATGAGCGAATTAACGAAAATTATGT
ATTGAGGCTTAAAGGATTACCATATAATGCATCAAAGACAGATATTAAAG
AATTCTTTCAAGGTATTATTAAGTTTGAAGACATGTTCAAATTATTTTTT
TATTTTCTGTTGAACATCATTATTGGAAACTGGATGAAGTTATTCCGAAT
CCTGTCGCGTAACAATACAATAACAAATATAGTAATTGGAAAAATATGGT
TTTGGGATTATGGATCAAGTTAACTGAAGAAAATGGCATGTCAAATTATA
TATTAAGAATGACGGTATAACAATTATATCACTAATGATTTGTTGATGCT
TAAATACTGCAAATTGTGTTTTGGATCTTAACAAAGTTCACCAATGGTTT
AACATCGAATACATCTAGAAATGTGATCATGGATTTGGTGGAAGTAATAA
ATGGAATTTGGTGGACAAAAATTAATTCATTGAACATTTACAAAATCAGA
GGAGGATTTTTATCTTATTTTATATTTCATTTTTGTTTCATTATTAATGG
GCTTACGGAATTAGTTATTTCTTGATATTTAATTATTATGGTAAACGTTT
AGGACTGAAAATTTTGCCGGATGGAATGAGTATTCTCGTTGATCATAATG
GAAGGGCGCTAGGAGATGCTTTTGTTCAATTTGCAACGTACCATGATGCA
AAACTTGCCAAGGAACGGAATGGAAATAAAATTGCTCACAGGTTGGACTA
AGAATGATGGATAAGTTTATCAAATTTAAAAAAAGAATAATGAAAATATT
GGATTATTCGCTAAGTGACGGTTACAGTTAGGAATAAGGAGAGATTAGGA
TTTAAATTTAAAGCAAATTAGAGTTGGAGGAGAGGATAGCTTACTAAATA
TTCAATATACATTACAAAATTAAACTTGCTGTTTTCTATTAGGTACATTG
AAGTATTTGATAGTAATATTGAAGAAGCCAATAATGAAATTCGTCGACAA
ATGGAGTTTAATGAAATGCATGTGAAAAGGTTTGAAAAATCTCCGCCACC
ATCAAGAGGACCTAGGTCCATGGATGACGGAATACCTTATCCTGATTCAC
AGAGATTTTACGGTAGAATTCCAGTAATTGTCAATATGAAAGGAGTTTCA
ATAAGTACACGCCCAGATGATGTTTTTAGATTTTTTCGGCCTCTCGTTCC
ATTGAATATTTCTATGAAATTTATGGGTGGAGCCGTTGAAGGAGAAATAG
ATATTGAATTTGCTAATGAGGACGAGGCATACAGTGCAATGTCTAAAAAT
AGAGAAAGATTAGGTGGTCATTCAGTATTTTTGTCAATTATCCCAATGAG
AGATGAATTTCCATATAAACCAATGGGAATACCAGAATACGATCGGAGGG
AACGAGAAATGAGTCGGGGAATTCCAGGTCCCGGTAGAGGCTTTAGCGAT
CGTGATAATTTTTATCCCCAGTCAAGATACTACTGAATCATTTGACGGAT
TTTTCATTGAAATTAGTTGTAGTTAATTGTTAATAATTCCAATATTTGTT
GTGATTTGTATTTGCATCGTGTCACTCATATATTTATTTCGTGTACAATT
TTTTGGTAAATTTTTAATGATTTTAGTTAGAATTAATGATATTGTATTAT
TTGTGGGCGTGTTGCGAAAACCTGTCAATAAAATAGGAACAATTTTGCAT
TTTATCTACTTATCAACGTCTAAAAATAATAAAACATTTATATTTTGTCT
GTTTGACCGAACTTTATTTGTTATTTCCACTTTTGTAACTTCATTTCCAG
TAACGGTTATCAGTGTAGCTTGAATGCTACGCGTCTTGATTTAATAGTTT
TATCTTGACTTACCTCAATAAAATTTAATCTACTTTCATAGAGTACACTT
GATATATATCTGATGTGTTACTAGAGAATATGACTGATAATTCATTTGGA
ATATATTTTTGTTAATTTTATTGCATAGTGGTTAATTTTGTCTTG
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protein sequence of SMED30001933-orf-1

>SMED30001933-orf-1 ID=SMED30001933-orf-1|Name=SMED30001933-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=162bp
MEFNEMHVKRFEKSPPPSRGPRSMDDGIPYPDSQRFYGRIPVIVNMKGVS
ISTRPDDVFRFFRPLVPLNISMKFMGGAVEGEIDIEFANEDEAYSAMSKN
RERLGGHSVFLSIIPMRDEFPYKPMGIPEYDRREREMSRGIPGPGRGFSD
RDNFYPQSRYY*
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protein sequence of SMED30001933-orf-2

>SMED30001933-orf-2 ID=SMED30001933-orf-2|Name=SMED30001933-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=197bp
MSEYWIKLRGMPYRTTMDDIIEFLPDIGIKGSKRGIHFPISQRNIEWGEA
FIELESEEDLNKAKDRHNQHMGRRYIEVFSSTKADMLKACKDMPVAVNEN
GRERPRRERSRSQVHERINENYVLRLKGLPYNASKTDIKEFFQGIIKFED
MFKLFFYFLLNIIIGNWMKLFRILSRNNTITNIVIGKIWFWDYGSS*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000099neuron
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 38..118
e-value: 3.0E-8
score: 35.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 33..115