Retinal pigment epithelium-derived rhodopsin homolog
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30001792 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Human
Match: RGR (retinal G protein coupled receptor [Source:HGNC Symbol;Acc:HGNC:9990]) HSP 1 Score: 80.1073 bits (196), Expect = 6.737e-16 Identity = 61/209 (29.19%), Postives = 97/209 (46.41%), Query Frame = 3 Query: 570 QNNQINEDCRKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWN--VNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDS 1184 + ++ C + + G+ L A++AA S + RW +G CQ + F+GFV +++I IA RY Y TR QL WN V+ +L+V W+ FW+ LPL G+G Y E T CT+ N ++ + F +P+ I I + SL +K K + +R L L W Y +L L ++++ S Sbjct: 43 KTPELRTPCHLLVLSLALADSGISLNALVAATSSLLRRWPYGSDGCQAHGFQGFVTALASICSSAAIAWGRYHHYCTRS-QLAWNSAVSLVLFV-WLSSAFWAALPLLGWGHYDYEPLGTCCTLDYSKGDRNFTSFLFTMSFFNFAMPLFITITSY----SLMEQKLGKSGHLQVNTTLPARTL----LLGWGPYAILYLYAVIADVTS 241
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Human
Match: RRH (retinal pigment epithelium-derived rhodopsin homolog [Source:HGNC Symbol;Acc:HGNC:10450]) HSP 1 Score: 80.1073 bits (196), Expect = 1.375e-15 Identity = 63/224 (28.12%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 642 LGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILYV-----CWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLF---TLSLE----TRKTEKIN---SFEKIMNNVSRKLFLMDLFSWCGYLVLCL---IGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 +G ++A S G W FG CQ YA FG+++I ++ V+A++RY + + + Y+ WI GLFW+L+P+ G+ SYA + +CTI + Y +I + F++P++ +MF+ + TLS++ + TE +N S + + +S + M L +W Y ++CL G P AI ++PL K P +Y Sbjct: 77 IGYPMSAASDLYGSWKFGYAGCQVYAGLNIFFGMASIGLLTVVAVDRYLTICLPDVGRRMTTNTYIGLILGAWINGLFWALMPIIGWASYAPDPTGATCTINWRKNDRSFVSYTMTVIAINFIVPLT--VMFYCYYHVTLSIKHHTTSDCTESLNRDWSDQIDVTKMSVIMICMFLVAWSPYSIVCLWASFGDPKKIPPPMAI----IAPLFAKSSTFYNPCIY 294
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Human
Match: RGR (retinal G protein coupled receptor [Source:HGNC Symbol;Acc:HGNC:9990]) HSP 1 Score: 76.6406 bits (187), Expect = 2.667e-15 Identity = 49/153 (32.03%), Postives = 76/153 (49.67%), Query Frame = 3 Query: 570 QNNQINEDCRKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWN--VNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGI 1016 + ++ C + + G+ L A++AA S + RW +G CQ + F+GFV +++I IA RY Y TR QL WN V+ +L+V W+ FW+ LPL G+G Y E T CT+ N ++ + F +P+ I I Sbjct: 43 KTPELRTPCHLLVLSLALADSGISLNALVAATSSLLRRWPYGSDGCQAHGFQGFVTALASICSSAAIAWGRYHHYCTRS-QLAWNSAVSLVLFV-WLSSAFWAALPLLGWGHYDYEPLGTCCTLDYSKGDRNFTSFLFTMSFFNFAMPLFITI 193
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Human
Match: RGR (retinal G protein coupled receptor [Source:HGNC Symbol;Acc:HGNC:9990]) HSP 1 Score: 76.2554 bits (186), Expect = 4.298e-15 Identity = 49/153 (32.03%), Postives = 76/153 (49.67%), Query Frame = 3 Query: 570 QNNQINEDCRKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWN--VNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGI 1016 + ++ C + + G+ L A++AA S + RW +G CQ + F+GFV +++I IA RY Y TR QL WN V+ +L+V W+ FW+ LPL G+G Y E T CT+ N ++ + F +P+ I I Sbjct: 43 KTPELRTPCHLLVLSLALADSGISLNALVAATSSLLRRWPYGSDGCQAHGFQGFVTALASICSSAAIAWGRYHHYCTRS-QLAWNSAVSLVLFV-WLSSAFWAALPLLGWGHYDYEPLGTCCTLDYSKGDRNFTSFLFTMSFFNFAMPLFITI 193
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Human
Match: RGR (retinal G protein coupled receptor [Source:HGNC Symbol;Acc:HGNC:9990]) HSP 1 Score: 76.6406 bits (187), Expect = 5.266e-15 Identity = 49/153 (32.03%), Postives = 76/153 (49.67%), Query Frame = 3 Query: 570 QNNQINEDCRKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWN--VNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGI 1016 + ++ C + + G+ L A++AA S + RW +G CQ + F+GFV +++I IA RY Y TR QL WN V+ +L+V W+ FW+ LPL G+G Y E T CT+ N ++ + F +P+ I I Sbjct: 43 KTPELRTPCHLLVLSLALADSGISLNALVAATSSLLRRWPYGSDGCQAHGFQGFVTALASICSSAAIAWGRYHHYCTRS-QLAWNSAVSLVLFV-WLSSAFWAALPLLGWGHYDYEPLGTCCTLDYSKGDRNFTSFLFTMSFFNFAMPLFITI 193
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Fly
Match: ninaE (gene:FBgn0002940 transcript:FBtr0083857) HSP 1 Score: 60.077 bits (144), Expect = 2.737e-9 Identity = 40/155 (25.81%), Postives = 74/155 (47.74%), Query Frame = 3 Query: 684 WLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY------YSTRKIQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFS 1130 W+ G +C YA G FG S+I + +I+++RY + R + +P + +I Y+ W + W L P FG+ Y E + TSC I + N + Y+ I + +P+ + + F ++ +++ EK M ++K+ + L S Sbjct: 116 WVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALGKIAYI-WFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIA-------AVSAHEKAMREQAKKMNVKSLRS 262
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Fly
Match: Rh6 (gene:FBgn0019940 transcript:FBtr0347603) HSP 1 Score: 57.7658 bits (138), Expect = 1.398e-8 Identity = 49/199 (24.62%), Postives = 85/199 (42.71%), Query Frame = 3 Query: 672 FVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRK--IQLPWNVNQI---LYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFD---------LSHNHQLYMGGLIIVGFLLPVSIGIMFH----LFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQD-SPWAILFSSV 1211 F G W+ G FLC+ Y G +FG +I + +IA +RY K + P L V W + W+L+PLFG+ Y E + T+C F + ++ +Y+ L+ + F + M + SL + +K + E + V+ + F+W Y ++ G+ + SP + + SV Sbjct: 109 FYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTIINYAGIFESMHLSPLSTICGSV 307
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Fly
Match: Rh2 (gene:FBgn0003248 transcript:FBtr0083697) HSP 1 Score: 55.8398 bits (133), Expect = 5.703e-8 Identity = 44/186 (23.66%), Postives = 83/186 (44.62%), Query Frame = 3 Query: 684 WLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRK------IQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLP----------VSIGIMFHLFTLSLETRK--TEKINSFEKIMNNVSRKLFLMDL-------FSWCGYLVLCLIGL 1166 W+ G C YA G +FG +I + +IA +RY K + + ++ +IL++ W++ +FW+++PL G+ +Y E + T+C+I N + Y+ + + P + + H + + +K + + S E + KL + L +W YLV+C GL Sbjct: 123 WVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGTPMTIKTSIMKILFI-WMMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMWNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLRSSEDCDKSAEGKLAKVALTTISLWFMAWTPYLVICYFGL 307
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Zebrafish
Match: rrh (retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]) HSP 1 Score: 79.7221 bits (195), Expect = 1.467e-15 Identity = 60/235 (25.53%), Postives = 111/235 (47.23%), Query Frame = 3 Query: 612 HFIYSSLGVV-LGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILY-----VCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHL-FTLSLETRKTEKINSFEKI---------MNNVSRKLFLMDLFSWCGYLVLCL---IGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 + ++ +GV +G ++A S G W FG CQ YA FG+++I ++ V+A++RY + + + + Y W+ +FWS +P+ G+ YA + +CTI + + Y +I V F++P+S +MF+ + +S ++ + N + I + +S + +M L +W Y ++CL G +P AI ++PLL K P +Y Sbjct: 111 NLAFTDIGVAGIGYPMSAASDLHGSWKFGYMGCQIYAALNIFFGMASIGLLTVVAIDRYLTICRPDIGQKLTTRSYTLLIVAAWLNAVFWSSMPIVGWAGYAPDPTGATCTINWRNNDTSFVSYTMTVITVNFIIPLS--VMFYCYYNVSATVKRFKASNCLDSINMDWSDQMDVTKMSVIMIVMFLAAWSPYSIVCLWASFGDPQKIPAPMAI----IAPLLAKSSTFYNPCIY 339
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Zebrafish
Match: rgra (retinal G protein coupled receptor a [Source:ZFIN;Acc:ZDB-GENE-040924-6]) HSP 1 Score: 78.5666 bits (192), Expect = 1.635e-15 Identity = 69/219 (31.51%), Postives = 103/219 (47.03%), Query Frame = 3 Query: 624 SSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTR-KIQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSI---GIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQD--SPW----AILFSSVSPLLTKFGIAL 1244 + +G+ A +AA S F+ W +G CQ + F+GF+ +++I+ I IA +RY Y TR K+Q + +L+ W+ FW+ +PLFG+G Y E +T CT+ D S + Y V +L+P+SI GI + LS +K + N L M LF W Y +L V N SP A + + SP F AL Sbjct: 61 ADMGISTNATVAAFSSFLRYWPYGSDGCQTHGFQGFMTALASIHFIAAIAWDRYHQYCTRTKLQWSSAITLVLFT-WLFTAFWAAMPLFGWGEYDYEPLRTCCTL---DYSKGDRNY------VSYLIPMSIFNMGIQVFV-VLSSYQSIDKKFKKTGQAKFNCGTPLKTM-LFCWGPYGILAFYAAVENATLVSPKLRMIAPILAKTSPTFNVFVYAL 267
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Zebrafish
Match: opn4a (opsin 4a (melanopsin) [Source:NCBI gene;Acc:571624]) HSP 1 Score: 73.9442 bits (180), Expect = 2.450e-13 Identity = 62/218 (28.44%), Postives = 104/218 (47.71%), Query Frame = 3 Query: 681 RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYS-TRKIQLPWNVNQ-----ILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTL-SLET-----------RKTEKINSFEKIMN-----NVSRKLFLMDLFSWCGYLVLCLIGLVSNQD--SPWAILFSSVSPLLTKFGIALLPMLY 1259 RW+FG+ C+ YAF G +FGI ++ ++VIA++RY+ TR + ++Q IL V W+ L WSL P FG+ +Y E TSCT + + + Y L I F +P+ + I + F S+ T K + + F+++ N ++ + LM + SW Y + L D +P+ +SV ++ K P++Y Sbjct: 141 RWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLASIGVLSQKRALLILLVAWVYSLGWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFIFVFFIPLIVIIYCYFFIFRSIRTTNEAVGKINGDNKRDSMKRFQRLKNEWKMAKIALIVILMYVISWSPYSTVALTAFAGYSDFLTPY---MNSVPAVIAKASAIHNPIIY 355
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Zebrafish
Match: opn4a (opsin 4a (melanopsin) [Source:NCBI gene;Acc:571624]) HSP 1 Score: 73.9442 bits (180), Expect = 2.532e-13 Identity = 62/218 (28.44%), Postives = 104/218 (47.71%), Query Frame = 3 Query: 681 RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYS-TRKIQLPWNVNQ-----ILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTL-SLET-----------RKTEKINSFEKIMN-----NVSRKLFLMDLFSWCGYLVLCLIGLVSNQD--SPWAILFSSVSPLLTKFGIALLPMLY 1259 RW+FG+ C+ YAF G +FGI ++ ++VIA++RY+ TR + ++Q IL V W+ L WSL P FG+ +Y E TSCT + + + Y L I F +P+ + I + F S+ T K + + F+++ N ++ + LM + SW Y + L D +P+ +SV ++ K P++Y Sbjct: 140 RWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLASIGVLSQKRALLILLVAWVYSLGWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFIFVFFIPLIVIIYCYFFIFRSIRTTNEAVGKINGDNKRDSMKRFQRLKNEWKMAKIALIVILMYVISWSPYSTVALTAFAGYSDFLTPY---MNSVPAVIAKASAIHNPIIY 354
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Zebrafish
Match: opn4xb (opsin 4xb [Source:NCBI gene;Acc:563080]) HSP 1 Score: 72.7886 bits (177), Expect = 2.811e-13 Identity = 67/238 (28.15%), Postives = 117/238 (49.16%), Query Frame = 3 Query: 585 NEDCRKIHRHFIYS-SLGVVLGAILAAPSRFVG----RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYS-TRKIQ-LPWNVNQ---ILYVC-WIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLF--------TLSLETRKTEKINSFEKIMNNVSR--------KLFLMDLFSWCGYLVLCLIGLVSNQD--SPWAILFSSV 1211 N+ R + +FI + ++ L AI +P F+ W+FG+ C+ YAF G +FGI+++ ++ I+++RY T+ +Q + WN + + +C W+ L WSL PL G+ SY E TSCT S ++ Y L F +P+SI + +LF + LE ++K +SF K + S + ++ + SW Y + L+ +QD +P++ +V Sbjct: 46 NKKLRSLPNYFIMNLAVSDFLMAITQSPIFFINCLYKEWMFGELGCKIYAFCGALFGITSMINLLAISIDRYLVITKPLQTIQWNSKRRTGLAILCIWLYSLAWSLAPLIGWSSYIPEGLMTSCTWDYVSPSPANKSYTMMLCCFVFFIPLSIILYCYLFMFLSVRQASRDLEMLSSQK-SSFVKQQSMRSEWKLAKIAAVVIVVYVLSWAPYACVTLVAWAGHQDVLTPYSKTLPAV 282
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Xenopus
Match: hes5.1 (hes family bHLH transcription factor 5 [Source:Xenbase;Acc:XB-GENE-481135]) HSP 1 Score: 80.4925 bits (197), Expect = 5.115e-16 Identity = 57/187 (30.48%), Postives = 93/187 (49.73%), Query Frame = 3 Query: 624 SSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWNVN-QILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSN 1175 + G+ L A +AA S F+ W +G CQ + F+GFV +S+I IA +RY Y TR +L W+ +++ W FWS +PLFG+G Y E +T CT+ N+ Y+ + FL+P+ I +M ++ + +K+ +I F M S +F W Y +LC ++ + Sbjct: 61 ADTGLCLNAFVAAFSSFLRYWPYGSEGCQIHGFQGFVAALSSIGSCAAIAWDRYHQYCTRS-KLHWSTAVSVVFFIWGFSAFWSAMPLFGWGEYDYEPLRTCCTLDYSKGDRNYISYLFTMAFFEFLVPLFI-LMTAYQSIYQKMKKSGQIR-FNTSMPVKSL------VFCWGPYCLLCFYAVIQD 238
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Xenopus
Match: ENSXETT00000008004.1 (opsin 5, gene 2 [Source:NCBI gene;Acc:100493595]) HSP 1 Score: 72.7886 bits (177), Expect = 2.895e-13 Identity = 67/224 (29.91%), Postives = 101/224 (45.09%), Query Frame = 3 Query: 654 LAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILYVC------WIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLL-----PVSI-----GIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMD---LFSWCGYLVLCLIGLV-SNQDSPWAILFSSVSPLLTKFGIALLPMLYWS 1265 LA S + WL GD C +YA GF FG+S++ + V+A+ RY T + + VC W+ L W++LPL G+G Y E TSCTI D H+ + II F+L V+I GI + L E + +KI + K+ ++ L+ L SW Y + L S++ P + S + L K A PM+Y++ Sbjct: 70 LAIASAWNHAWLGGDASCLYYALMGFFFGVSSMMTLTVMAIIRYRVTSSFKYSGCTIEKKAVCILIMCIWLYALLWAVLPLLGWGRYGPEPFGTSCTIAWGDFHHSSNGF--SFIISMFILCTISPAVTIVVCYSGIAWKLHKAYQEIKNQDKIPNSTKVEKKLTLLAILVSFGFLISWTPYAAVSFWSLFHSSKYIPPVV--SLLPCLFAKSSTAFNPMIYYA 289
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Xenopus
Match: camk2d (calcium/calmodulin dependent protein kinase (CaM kinase) II delta [Source:Xenbase;Acc:XB-GENE-868293]) HSP 1 Score: 70.4774 bits (171), Expect = 1.960e-12 Identity = 51/198 (25.76%), Postives = 97/198 (48.99%), Query Frame = 3 Query: 612 HFIYSSLGVV-LGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVN-----QILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKT-------EKIN---SFEKIMNNVSRKLFLMDLFSWCGYLVLCL 1157 + ++ +GV +G ++A S G W FG CQ YA FG+++I ++ V+A++RY + + + ++ ++ WI +FWS++P+ G+ SYA + +CTI + Y ++ V F++P + +MF+ + T K IN S + + +S + +M L +W Y ++CL Sbjct: 83 NLAFTDIGVSGIGYPMSAASDLHGSWKFGYVGCQIYAGLNIFFGMASIGLLTVVAIDRYLTICRPDIGRRISGRHYTAMILAAWINAVFWSVMPVVGWSSYAPDPTGATCTINWRKNDVSFVSYTMSVVAVNFVVP--LMVMFYCYYNVSRTMKGYGSRSSLGGINADWSDQTDVTKMSMVMIVMFLVAWSPYSIVCL 278
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Xenopus
Match: ENSXETT00000039733.1 (melanopsin-B-like [Source:NCBI gene;Acc:100485437]) HSP 1 Score: 63.1586 bits (152), Expect = 7.473e-10 Identity = 60/253 (23.72%), Postives = 112/253 (44.27%), Query Frame = 3 Query: 585 NEDCRKIHRHFIYS-SLGVVLGAILAAPSRFVG----RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYS-TRKIQ-LPWNVN----QILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLP---VSIGIMFHLFTLSLETRKTEKINSF------------EKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDS--PWAILFSSVSPLLTKFGIALLPMLY 1259 N+ R +FI + ++ L + AP F+ W+ G+ C YAF G +FGI+++ ++ I++ RY T+ +Q + W+ Q++ + W+ WSL PL G+ SY E + SCT + +++ Y L F +P +S F + R +K+ S+ E M ++ + ++ + SW Y + LI + S P++ +V ++ K P++Y Sbjct: 57 NKKLRTAPNYFIMNLAISDFLMSATQAPVCFLSSLHREWILGEIGCNVYAFCGALFGITSMMTLLAISVNRYIVITKPLQSIQWSSKKRTLQVIVLVWMYSFMWSLAPLLGWSSYVPEGLRISCTWDYVTSTTSNKSYTMMLCCCVFFIPLIIISHCYFFMFLAIRSTGRNVQKLGSYGRQSFLTPTMKNEWKMAKIAFVIIIVYVLSWSPYACVTLIAWAGHGKSLTPYS---KTVPAVIAKASAIYNPIIY 306
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Xenopus
Match: OPN5 (opsin 5 [Source:NCBI gene;Acc:100497642]) HSP 1 Score: 62.003 bits (149), Expect = 1.017e-9 Identity = 56/229 (24.45%), Postives = 101/229 (44.10%), Query Frame = 3 Query: 627 SLGV-VLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQL-PWNVNQ----ILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIK--IFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFE-KIMNNVSRKLFLMD---------LFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 LG+ V G A S F RW+FG C++Y + GF FG ++ + V++++RY ++ W + L V W W+ LPL G G+YA E T+CT+ + S Q+++ ++ L P + + + ++ +++ F+ + NN + ++ L L +W Y V+ + DS I S V ++ K P++Y Sbjct: 79 DLGISVTGKPFAIVSCFSHRWVFGWNACRWYGWAGFFFGCGSLITLTVVSLDRYLKICHLRYGTWLKRRHAFIALAVIWAYATLWATLPLVGVGNYAPEPFGTTCTLDWWLAQASVKGQIFVLSMLFFCLLFPTMVIVFSYAKIIAKVKSSAKEVAHFDTRNQNNHTLEIKLTKVAMLICAGFLIAWFPYAVVSVWSAFGQPDSI-PIELSVVPTMMAKSASMYNPIIY 306
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Mouse
Match: Rrh (retinal pigment epithelium derived rhodopsin homolog [Source:MGI Symbol;Acc:MGI:1097709]) HSP 1 Score: 80.1073 bits (196), Expect = 8.931e-16 Identity = 62/230 (26.96%), Postives = 109/230 (47.39%), Query Frame = 3 Query: 621 YSSLGVV-LGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILYV-----CWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFH----------LFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDS-PWAILFSSVSPLLTKFGIALLPMLY 1259 ++ +GV +G ++A S G W FG CQ YA FG+ +I ++ V+AM+RY + + + Y+ WI GLFW+L+P+ G+ SYA + +CTI + + Y +I+V F++P++ +MF+ L+ S T + + + + +S + LM L +W Y ++CL N P ++ ++PL K P +Y Sbjct: 69 FTDIGVSSIGYPMSAASDLHGSWKFGHAGCQIYAGLNIFFGMVSIGLLTVVAMDRYLTISCPDVGRRMTTNTYLSMILGAWINGLFWALMPIIGWASYAPDPTGATCTINWRNNDTSFVSYTMMVIVVNFIVPLT--VMFYCYYHVSRSLRLYAASDCTAHLHRDWADQADVTKMSVIMILMFLLAWSPYSIVCLWACFGNPKKIPPSMAI--IAPLFAKSSTFYNPCIY 294
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Mouse
Match: Rrh (retinal pigment epithelium derived rhodopsin homolog [Source:MGI Symbol;Acc:MGI:1097709]) HSP 1 Score: 80.1073 bits (196), Expect = 8.931e-16 Identity = 62/230 (26.96%), Postives = 109/230 (47.39%), Query Frame = 3 Query: 621 YSSLGVV-LGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILYV-----CWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFH----------LFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDS-PWAILFSSVSPLLTKFGIALLPMLY 1259 ++ +GV +G ++A S G W FG CQ YA FG+ +I ++ V+AM+RY + + + Y+ WI GLFW+L+P+ G+ SYA + +CTI + + Y +I+V F++P++ +MF+ L+ S T + + + + +S + LM L +W Y ++CL N P ++ ++PL K P +Y Sbjct: 69 FTDIGVSSIGYPMSAASDLHGSWKFGHAGCQIYAGLNIFFGMVSIGLLTVVAMDRYLTISCPDVGRRMTTNTYLSMILGAWINGLFWALMPIIGWASYAPDPTGATCTINWRNNDTSFVSYTMMVIVVNFIVPLT--VMFYCYYHVSRSLRLYAASDCTAHLHRDWADQADVTKMSVIMILMFLLAWSPYSIVCLWACFGNPKKIPPSMAI--IAPLFAKSSTFYNPCIY 294
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Mouse
Match: Opn5 (opsin 5 [Source:MGI Symbol;Acc:MGI:2662912]) HSP 1 Score: 70.4774 bits (171), Expect = 1.801e-12 Identity = 56/224 (25.00%), Postives = 98/224 (43.75%), Query Frame = 3 Query: 639 VLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLP-WNVNQILYVC----WIVGLFWSLLPLFGFGSYALELHQTSCTIK--IFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSF----------EKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 V+G S F RW+FG F C++Y + GF FG ++ + ++++RY + W + Y+C W FW+ +PL G G YA E TSCT+ + S Q+++ ++ LLP ++ + + ++ ++++ F E + V+ + L +W Y V+ + DS I S V LL K P++Y Sbjct: 84 VVGKPFTIISCFCHRWVFGWFGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICYLSYGVWLKRKHAYICLAVIWAYASFWTTMPLVGLGDYAPEPFGTSCTLDWWLAQASGGGQVFILSILFFCLLLPTAVIVFSYAKIIAKVKSSSKEVAHFDSRIHSSHVLEVKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSI-PIQLSVVPTLLAKSAAMYNPIIY 306
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Mouse
Match: Rgr (retinal G protein coupled receptor [Source:MGI Symbol;Acc:MGI:1929473]) HSP 1 Score: 67.3958 bits (163), Expect = 8.242e-12 Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 624 SSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWN--VNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSI 1010 + G+ L A++AA S + RW G CQ + F+GF +++I +A RY Y TR+ QL W+ + +L+V W+ FW+ LPL G+G Y E T CT+ N ++ + FL+P+ I Sbjct: 61 ADTGISLNALVAAVSSLLRRWPHGSEGCQVHGFQGFATALASICGSAAVAWGRYHHYCTRR-QLAWDTAIPLVLFV-WMSSAFWASLPLMGWGHYDYEPVGTCCTLDYSRGDRNFISFLFTMAFFNFLVPLFI 191
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Mouse
Match: Rgr (retinal G protein coupled receptor [Source:MGI Symbol;Acc:MGI:1929473]) HSP 1 Score: 67.0106 bits (162), Expect = 8.786e-12 Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 624 SSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWN--VNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSI 1010 + G+ L A++AA S + RW G CQ + F+GF +++I +A RY Y TR+ QL W+ + +L+V W+ FW+ LPL G+G Y E T CT+ N ++ + FL+P+ I Sbjct: 61 ADTGISLNALVAAVSSLLRRWPHGSEGCQVHGFQGFATALASICGSAAVAWGRYHHYCTRR-QLAWDTAIPLVLFV-WMSSAFWASLPLMGWGHYDYEPVGTCCTLDYSRGDRNFISFLFTMAFFNFLVPLFI 191
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. UniProt/SwissProt
Match: sp|P23820|REIS_TODPA (Retinochrome OS=Todarodes pacificus OX=6637 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.023e-21 Identity = 70/227 (30.84%), Postives = 112/227 (49.34%), Query Frame = 3 Query: 612 HFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILY-----VCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIG---IMFHLFTLS----LETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPML 1256 H + +++ V G A S VGRWL+G CQ F GF G+S+I ++ AMERY + + + + Y + + G FW+ +PL G+ SY LE+H TSCTI ++Q Y+ L I F+ P+ G I LS E K + I S E+ + ++ L+ L SW G+ + + +++ + + L V P+++K G AL P+L Sbjct: 59 HVLITAMAVNGGDPAHASSSIVGRWLYGSVGCQLMGFWGFFGGMSHIWMLFAFAMERYMAVCHREFYQQMPSVYYSIIVGLMYTFGTFWATMPLLGWASYGLEVHGTSCTINYSVSDESYQSYVFFLAIFSFIFPMVSGWYAISKAWSGLSAIPDAEKEKDKDILS-EEQLTALAGAFILISLISWSGFGYVAIYSALTHGGAQLSHLRGHVPPIMSKTGCALFPLL 284
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. UniProt/SwissProt
Match: sp|P47804|RGR_HUMAN (RPE-retinal G protein-coupled receptor OS=Homo sapiens OX=9606 GN=RGR PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.235e-15 Identity = 61/209 (29.19%), Postives = 97/209 (46.41%), Query Frame = 3 Query: 570 QNNQINEDCRKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWN--VNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDS 1184 + ++ C + + G+ L A++AA S + RW +G CQ + F+GFV +++I IA RY Y TR QL WN V+ +L+V W+ FW+ LPL G+G Y E T CT+ N ++ + F +P+ I I + SL +K K + +R L L W Y +L L ++++ S Sbjct: 43 KTPELRTPCHLLVLSLALADSGISLNALVAATSSLLRRWPYGSDGCQAHGFQGFVTALASICSSAAIAWGRYHHYCTRS-QLAWNSAVSLVLFV-WLSSAFWAALPLLGWGHYDYEPLGTCCTLDYSKGDRNFTSFLFTMSFFNFAMPLFITITSY----SLMEQKLGKSGHLQVNTTLPARTL----LLGWGPYAILYLYAVIADVTS 241
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. UniProt/SwissProt
Match: sp|O35214|OPSX_MOUSE (Visual pigment-like receptor peropsin OS=Mus musculus OX=10090 GN=Rrh PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.247e-15 Identity = 62/230 (26.96%), Postives = 109/230 (47.39%), Query Frame = 3 Query: 621 YSSLGVV-LGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILYV-----CWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFH----------LFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDS-PWAILFSSVSPLLTKFGIALLPMLY 1259 ++ +GV +G ++A S G W FG CQ YA FG+ +I ++ V+AM+RY + + + Y+ WI GLFW+L+P+ G+ SYA + +CTI + + Y +I+V F++P++ +MF+ L+ S T + + + + +S + LM L +W Y ++CL N P ++ ++PL K P +Y Sbjct: 69 FTDIGVSSIGYPMSAASDLHGSWKFGHAGCQIYAGLNIFFGMVSIGLLTVVAMDRYLTISCPDVGRRMTTNTYLSMILGAWINGLFWALMPIIGWASYAPDPTGATCTINWRNNDTSFVSYTMMVIVVNFIVPLT--VMFYCYYHVSRSLRLYAASDCTAHLHRDWADQADVTKMSVIMILMFLLAWSPYSIVCLWACFGNPKKIPPSMAI--IAPLFAKSSTFYNPCIY 294
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. UniProt/SwissProt
Match: sp|O14718|OPSX_HUMAN (Visual pigment-like receptor peropsin OS=Homo sapiens OX=9606 GN=RRH PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.601e-15 Identity = 63/224 (28.12%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 642 LGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILYV-----CWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLF---TLSLE----TRKTEKIN---SFEKIMNNVSRKLFLMDLFSWCGYLVLCL---IGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 +G ++A S G W FG CQ YA FG+++I ++ V+A++RY + + + Y+ WI GLFW+L+P+ G+ SYA + +CTI + Y +I + F++P++ +MF+ + TLS++ + TE +N S + + +S + M L +W Y ++CL G P AI ++PL K P +Y Sbjct: 77 IGYPMSAASDLYGSWKFGYAGCQVYAGLNIFFGMASIGLLTVVAVDRYLTICLPDVGRRMTTNTYIGLILGAWINGLFWALMPIIGWASYAPDPTGATCTINWRKNDRSFVSYTMTVIAINFIVPLT--VMFYCYYHVTLSIKHHTTSDCTESLNRDWSDQIDVTKMSVIMICMFLVAWSPYSIVCLWASFGDPKKIPPPMAI----IAPLFAKSSTFYNPCIY 294
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. UniProt/SwissProt
Match: sp|O15973|OPSD1_MIZYE (Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN=SCOP1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.393e-14 Identity = 53/190 (27.89%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 666 SRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYS-TRKIQLPWNVNQ-----ILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSI----------GIMFH-----LFTLSLET---RKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIG 1163 S F +W+FG CQ Y F G VFG+ +IN + I+++RY T+ +Q + + ++ + W++ + S+ P FG+G+Y E QTSCT + + Y+ L + GFL+P+ I G+ H T S++T R K E ++ ++ + + + SW Y ++ LI Sbjct: 112 SSFHQKWIFGSLFCQLYGFVGGVFGLMSINTLTAISIDRYVVITKPLQASQTMTRRKVHLMIVIVWVLSILLSIPPFFGWGAYIPEGFQTSCTFDYLTKTARTRTYIVVLYLFGFLIPLIIIGVCYVLIIRGVRRHDQKMLTITRSMKTEDARANNKRARSELRISKIAMTVTCLFIISWSPYAIIALIA 301
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. TrEMBL
Match: A0A4Z2CMU9 (Opsin-5 isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_009156 PE=4 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.692e-25 Identity = 77/234 (32.91%), Postives = 122/234 (52.14%), Query Frame = 3 Query: 600 KIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINI---IVVIAMERYYSTRKIQ--LPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGI--MFHLFTLSLET-RKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDS--PWAILFSSVSPLLTKFGIALLPMLYWSVK 1271 K H H +SLG +L A + W FG+F CQ Y+F+G FG+++I++ I I M + I+ + NQIL WI+G W+ LPLFG+G Y LE H+TSC + ++ + +LYM + +G++LP I I + L + T+K N +I+ ++ + L LF W Y VL + LV+ + P+A ++ LL K A LP+ Y+S++ Sbjct: 23 KSHYHLTIASLGCILITPFTAIGVYRKGWPFGEFACQLYSFDGMFFGMTSIHLSCFICFITMIEVLNITYIRDFISNRYNQILCGIWIIGAIWATLPLFGYGRYTLEPHKTSCLLDWNNMDESMKLYMFAISTLGYILPFGIAIWSQYKLIQRPKSSGGDTDKNNEKIEILMKLNNSILLFSLFGWLSYGVLAINSLVAGHITLNPFAY---CITQLLAKISQAFLPIAYYSIE 253
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. TrEMBL
Match: A0A0L8HQC0 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22010085mg PE=4 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-22 Identity = 70/240 (29.17%), Postives = 121/240 (50.42%), Query Frame = 3 Query: 570 QNNQINEDCRKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILY-----VCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMF------HLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPML 1256 QN Q + +F+ +S V +G L + S GRWLFG+F C FY F GFV GIS+I ++ +ERY +T + + I Y + VG FW+++PL G+G Y LE TSCTI + + + Q + ++IV + P+ + L +S ++ ++ E+ + ++ + L SW G+ + + +++ + + L S++PLL+K G+ L PM+ Sbjct: 49 QNTQPRRKYSTL-IYFLLTSALVNIGFPLNSSSSIAGRWLFGNFGCHFYGFIGFVVGISHIWMLFAFCIERYVATCHREFYKRMPSIYYTLLFAAMYSVGTFWAVMPLLGWGEYGLEPTGTSCTISYINATDSFQSLIMSMVIVTYSFPIIVSCYAVSKAWTALGNMSDSEKEKDRDLLSEEQLTAMATVFIPIALISWSGFAYVSIYSAITDGGTTLSHLSVSMAPLLSKAGVILYPMI 287
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. TrEMBL
Match: W5XRX9 (Peropsin (Fragment) OS=Platynereis dumerilii OX=6359 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.301e-21 Identity = 66/241 (27.39%), Postives = 125/241 (51.87%), Query Frame = 3 Query: 570 QNNQINEDCRKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMER--------YYSTRKIQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLP---VSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 + N ++ +H S+ GV+ G A S F GRWLFG+ CQFYAFEG FGIS+I ++ V++++R YY ++ W + VC++ FWS +P+ G+ YAL+ +C + + + +++ Y+ + + F+LP ++IG + + EK++ ++ + + R L ++ + +W + +LCL LV + +I +++ L+ K A +P++Y Sbjct: 54 RENLVSRGSAAVHVAMAISNAGVLAGFPFTASSAFAGRWLFGEAGCQFYAFEGMFFGISSILLLGVLSVDRFINIHWPQYYGDLYLRPYW---LAILVCYLTAAFWSTVPIVGWARYALDKTHVACVVDWANPTSSYKSYIFAITMSCFMLPYALMAIGFIRTCLGRKATSTNVEKLS--DRDHDLIVRSLSIVSMVTWTPFAILCLQFLVRDPYDT-SITMAAMPALICKAVTAGVPLVY 288
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. TrEMBL
Match: A0A4E0RMI5 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Fasciola hepatica OX=6192 GN=D915_000926 PE=4 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.945e-21 Identity = 71/243 (29.22%), Postives = 120/243 (49.38%), Query Frame = 3 Query: 603 IHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRK--IQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKL-------------FLMDLFSWCGYLVLCLIGLVSNQDSPWAILF--SSVSP-------LLTKFGIALLPMLY 1259 +H H ++LGVV A S F +W+FG CQ YA EG + G++ I + I + + R I W ++ + WI G+FWS+LPLFGFG Y LE H+T+C +++ N ++Y+ L ++G+++PV + + + S+ + ++I + +K N+++K+ + + +W VL + W+I F S V+P LL KFG A P+ Y Sbjct: 69 LHFHLALNNLGVVAAFPFGAISTFYNQWMFGSLGCQIYAVEGMICGMNTIALTCYICLLHWLDVRYGIIFSTWFYRIVVALSWIFGIFWSILPLFGFGKYDLEPHKTTCGLRMPPSDWNDKVYLIALTLLGYVVPVFVAAVTY---SSVVKQYCDEIGNSDKTEENIAKKMEKFGTQIKLNGCILVQSILTWLALGVL----------ACWSISFGLSDVNPLVLYIPQLLAKFGCATAPISY 298
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. TrEMBL
Match: A0A5K4FAE3 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.971e-21 Identity = 70/242 (28.93%), Postives = 118/242 (48.76%), Query Frame = 3 Query: 597 RKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNI------------NIIVVIAMERYYSTRKIQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIG-------IMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDS--PWAILFSSVSPLLTKFGIALLPMLY 1259 + H H + LG + +A + W FG F CQ Y+F G +FG+++I ++ + + + S R +P+ + WI+G FW++LPL G+G Y LE H+TSC + ++ + +LYM L I G++LP IG I + + S + T+KI K+ N++ L ++F W Y +L + L+S Q + P++ ++ LL K A LP+ Y Sbjct: 42 KTFHYHLAAACLGCIAITPFSAIGVYQKGWPFGHFGCQSYSFAGMLFGMTSIYLSCFICFLTMVEVLNLTYIRNFISNRYNYIPFGI-------WIIGAFWAILPLLGYGRYTLEPHKTSCLLDWTNMDESMKLYMFSLFIFGYILPFGIGIWSQHKLIQYAVSNASKNNKNTKKIEILIKLNNSI----LLFNIFGWLSYGLLAIHSLISGQLTLNPFSY---CITQLLAKISQAFLPIAY 269
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Cavefish
Match: rrh (retinal pigment epithelium-derived rhodopsin homolog [Source:NCBI gene;Acc:103046733]) HSP 1 Score: 84.3445 bits (207), Expect = 2.899e-17 Identity = 61/235 (25.96%), Postives = 112/235 (47.66%), Query Frame = 3 Query: 612 HFIYSSLGVV-LGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILY-----VCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHL-FTLSLETRKTEKINSFEKI---------MNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQD---SPWAILFSSVSPLLTKFGIALLPMLY 1259 + ++ +GV +G ++A S G W FG CQ YA FG+++I ++ V+A++RY S + + + Y W+ +FWS +P+ G+ YA + +CTI + + Y +I V F++P+S +MF+ + +S+ ++ + N E I + +S + +M L +W Y ++CL S+ +P AI ++PL K P +Y Sbjct: 72 NLAFTDVGVAGIGYPMSAASDLYGSWKFGHTGCQIYAALNIFFGMASIGLLTVVAIDRYISICRPDIGQKMTTCSYTILIVAAWLNAVFWSSMPIVGWAGYAPDPTGATCTINWRNNDASFISYTMAVIFVNFIVPLS--VMFYCYYNVSVTIKRYKASNCLESINIDWSDQMDVTKMSVVMIVMFLVAWSPYSIVCLWASFSDPKMIPAPMAI----IAPLFAKSSTFYNPCIY 300
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Cavefish
Match: rgra (RPE-retinal G protein-coupled receptor-like [Source:NCBI gene;Acc:103044937]) HSP 1 Score: 75.8702 bits (185), Expect = 9.461e-15 Identity = 64/220 (29.09%), Postives = 101/220 (45.91%), Query Frame = 3 Query: 624 SSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWN-VNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIM----FHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQD--SPW----AILFSSVSPLLTKFGIAL 1244 + +G+ + A +AA S F+ W +G CQ + F GF+ +S+I+ I IA +RY Y TR +L W+ V + W+ FW+ +PL G+G Y E +T CT+ I N+ + +++P++I M F + + K K +K + K LF W Y +L V N + SP A + + SPL F AL Sbjct: 61 ADMGICMNATIAAFSSFLRYWPYGSEGCQTHGFHGFLTALSSIHFIAAIAWDRYHQYCTR-TKLQWSRVITLAIFIWLFTAFWAAMPLIGWGEYDYEPLRTCCTLDISKGDRNY---------ISYVIPMAICNMGIQTFIVMSCYKSIDKKFKKTGQDKFSCSTPLKTL---LFCWGPYGILAFYATVQNANLLSPKLKMIAPIVAKTSPLCNVFVYAL 267
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Cavefish
Match: opn4xb (opsin 4xb [Source:NCBI gene;Acc:563080]) HSP 1 Score: 70.4774 bits (171), Expect = 4.717e-13 Identity = 52/171 (30.41%), Postives = 88/171 (51.46%), Query Frame = 3 Query: 585 NEDCRKIHRHFIYS-SLGVVLGAILAAPSRFVG----RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYS-TRKIQ-LPWNVNQ----ILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEK 1064 N R + FI + ++ +L A+ +P F+ +W+ G+ C+ YAF G +FGIS++ ++ I+++RY TR +Q + WN I+ + WI L WSL PL G+ +Y E TSCT + ++ Y L F +P+ I I++ + L R+T + Sbjct: 47 NRKLRTLPNFFIINLAVSDLLMALTQSPVFFINCLHTQWMMGELGCEIYAFCGALFGISSMITLLAISVDRYLVITRPLQAMQWNSKCRTFIIITLVWIYSLAWSLAPLIGWSAYVPEGLMTSCTWDYASPAAGNRSYTLSLCCCVFFIPLII-ILYCYTCMFLSVRRTSR 216
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Cavefish
Match: opn4a (opsin 4 [Source:NCBI gene;Acc:103023553]) HSP 1 Score: 71.2478 bits (173), Expect = 1.434e-12 Identity = 62/218 (28.44%), Postives = 102/218 (46.79%), Query Frame = 3 Query: 681 RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYS-TRKIQLPWNVNQ-----ILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLF---TLSLETRKTEKIN---------SFEKIMN-----NVSRKLFLMDLFSWCGYLVLCLIGLVSNQD--SPWAILFSSVSPLLTKFGIALLPMLY 1259 RW+FG+ C+ YAF G +FGI ++ + VIA++RY+ TR + ++Q IL W L WSL P FG+ +Y E TSCT + + + Y L I F +P+ + I + F + + + EKIN F+++ N V+ + L+ + SW Y + L D +P+ +SV ++ K P++Y Sbjct: 128 RWIFGEKGCELYAFCGALFGICSMITLTVIAVDRYFVITRPLASIGVLSQKRALLILTCAWAYSLGWSLPPFFGWSAYVPEGLLTSCTWDYVTFTPSVRAYTMLLFIFVFFIPLIVIIYCYFFIFRAIRITNQDVEKINGNNTRDTIKKFQRLRNEWKMAKVALIVILLYVISWSPYSSVALTAFAGYADMLTPY---MNSVPAVIAKASAIHNPIIY 342
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Cavefish
Match: opn4b (opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3]) HSP 1 Score: 69.707 bits (169), Expect = 2.331e-12 Identity = 58/217 (26.73%), Postives = 102/217 (47.00%), Query Frame = 3 Query: 681 RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYS-TRKIQLPWNVNQ-----ILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEK--------INSFEKI--------MNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQD--SPWAILFSSVSPLLTKFGIALLPMLY 1259 RW+FG+ C+ YAF G +FG+ ++ ++VIA++RY+ TR + ++ IL + W+ + WSL P FG+ +Y E TSCT + + + Y L + F +P+ + I++ F + R T + NS +K M V+ + L+ + SW Y + L D +P+ +SV ++ K P++Y Sbjct: 92 RWIFGEKGCELYAFCGALFGMCSMITLMVIAVDRYFVITRPLASIGKMSHKRALFILVIAWLYTMCWSLPPFFGWSAYVPEGLMTSCTWDYMTFTPSVRAYTMLLFVFVFFIPLFV-IIYCYFCIFRAIRNTTRSWQCFGCLTNSIKKFHRMKSEWKMAKVALIVILLYVISWSPYSCVALTAFAGYADMLTPY---MNSVPAVIAKASAIHNPIIY 304
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Sea Lamprey
Match: opn4a (opsin 4a (melanopsin) [Source:NCBI gene;Acc:571624]) HSP 1 Score: 62.003 bits (149), Expect = 1.551e-10 Identity = 55/219 (25.11%), Postives = 98/219 (44.75%), Query Frame = 3 Query: 681 RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYS-TRKIQLPWNVNQ-----ILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTL------------------SLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQD--SPWAILFSSVSPLLTKFGIALLPMLY 1259 RW+FG+ C+ YAF G +FGI+++ ++VIA +RY TR + +++ I W L WSL P FG+ +Y E TSCT + + Y L F +P+ + I ++ S E++K ++ + E + ++ + L+ + SW Y + L+ D +P+ +SV ++ K P++Y Sbjct: 79 RWIFGEKGCELYAFCGALFGIASMVTLMVIATDRYLVLTRPLASIGAMSKRRAMYITAAVWFYSLAWSLPPFFGWSAYVPEGLMTSCTWDYVTFTPAVRSYTMLLFCFVFFIPLIVIIFCYVRIFAAIKNTNRAVKTLGDAHDSKESQKQQQRMNAEWKLAKIALIVILLYVVSWSPYSCVALVAWAGYADMLTPY---MNSVPAIIAKASAIHNPIVY 294
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Sea Lamprey
Match: opn3 (opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16]) HSP 1 Score: 52.373 bits (124), Expect = 1.647e-7 Identity = 50/212 (23.58%), Postives = 85/212 (40.09%), Query Frame = 3 Query: 681 RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQL---PWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYM---------GGLIIVGF-----LLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQD--SPWAILFSSVSPLLTKFGIALLPMLY 1259 RW++G+ C + F +FGI +I+ + ++ ERY K Q+ W + Y W+ W+ PL G+ Y LE H C+I + ++ L+++GF L ++ H+ + R + + E ++ + L W Y VL L+ N D +P S + K IA P+LY Sbjct: 71 RWVWGNGGCVWDGFSNSLFGIVSISTLTALSYERYARLIKAQVLDFSWAWRAVTYT-WLYSAAWTGAPLLGWSRYVLEKHGLGCSIDWASSNPPDAAFVLFFFLGCLAAPLLVMGFCFGRIALAITQFRYLHVAQVHTAGRMAQTLRG-ESRAARLALLVVATFLLCWMPYAVLALLTAAGNGDLINP---ATSVIPSFFAKSSIAYNPILY 277
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Sea Lamprey
Match: parapinopsina (parapinopsin a [Source:ZFIN;Acc:ZDB-GENE-101129-1]) HSP 1 Score: 45.8246 bits (107), Expect = 9.386e-6 Identity = 51/186 (27.42%), Postives = 77/186 (41.40%), Query Frame = 3 Query: 738 GISNINIIVVIAMERYYSTRKIQLPWNVNQILYVC-----WIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDL-------FSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 G++ + + V+A+ERY K + +C W L WS PLFG+G Y E TSC D S + + YM I F LP+ I I+F L + K K+ + RK+ +M + W Y L I +V D + + +S+ L K A P++Y Sbjct: 1 GMTALITVCVLAVERYVVVCKPLGGVHFGTQHGLCGVAISWTWALAWSAPPLFGWGRYHYEGVGTSCAPDWADSSPSGRSYMTTYFIFCFALPMII-ILFCYTKLMIAIHKVSKLGLSAN--DTAERKVGIMVVVMVFAFFLCWLPYAALA-IAVVIKPDLKVSPVTASIPVYLAKSSGAYNPIIY 182
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Nematostella
Match: NVOP42 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RWR8]) HSP 1 Score: 60.4622 bits (145), Expect = 3.732e-10 Identity = 52/221 (23.53%), Postives = 97/221 (43.89%), Query Frame = 3 Query: 630 LGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSL----------ETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQD-SPWAILFSSVSPLLTKFGIALLPMLY 1259 L VLG + VG W LC FY G ++ + +A +R+ + K + ++ W G+ W++ P+ G+ Y LE +T C I D S ++ Y+ + + FLLP+++ I + + L T ++EK N++ + +FL L +W Y ++ L ++ + SP A +++ +L K P++Y Sbjct: 58 LQAVLGKPVVIYGNVVGWWNADRALCVFYGLSTAALGFVSLLHLAALAFQRWLAITKPMTYKRIYPLVGTLWAWGMLWAVFPVLGWSGYELEPGETGCAITWNDQSTTNKSYIFIIFGIFFLLPITLVIGCYAWVAKLARNIDAAASQATLRSEKENAWTSFV------MFLGFLIAWLPYAIVSLYSAITGERVSPEA---ATIPGMLAKSASCYNPLIY 269
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Nematostella
Match: EDO32903 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7STR1]) HSP 1 Score: 57.3806 bits (137), Expect = 5.088e-9 Identity = 32/117 (27.35%), Postives = 62/117 (52.99%), Query Frame = 3 Query: 681 RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYST----RKIQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIM 1019 +W+FGD +CQF F +F +S++ + I++E+Y++ K+ ++ W+ L ++ LPLFGF Y + T C ++I ++ ++ + I G+ +P +GIM Sbjct: 86 KWIFGDSVCQFNGFVNILFAMSSLFTLTAISVEKYFANVKPLYKVVTRRRAQLMVVSAWLGSLVFASLPLFGFTRYKYKKDMTQCGVQI-PVTPGQMIHAILVFICGYTVP--LGIM 199
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Nematostella
Match: EDO29612 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T351]) HSP 1 Score: 56.6102 bits (135), Expect = 7.358e-9 Identity = 32/117 (27.35%), Postives = 62/117 (52.99%), Query Frame = 3 Query: 681 RWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYST----RKIQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIM 1019 +W+FGD +CQF F +F +S++ + I++E+Y++ K+ ++ W+ L ++ LPLFGF Y + T C ++I ++ ++ + I G+ +P +GIM Sbjct: 60 KWIFGDSVCQFNGFVNILFAMSSLFTLTAISVEKYFAIVKPLYKVVTRRRAQLMVVSAWLGSLVFASLPLFGFTRYKYKKDMTQCGVQI-PVTPGQMIHAILVFICGYTVP--LGIM 173
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Nematostella
Match: NVOP5 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI24]) HSP 1 Score: 56.9954 bits (136), Expect = 1.219e-8 Identity = 59/228 (25.88%), Postives = 102/228 (44.74%), Query Frame = 3 Query: 630 LGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWN-------VNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKI-----FDLSHNHQLYMGGLII-VGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNV--SRKLFLM---DLFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 L +G LA + G W + C+ +AF + FG+ ++ + ++A E+Y + K W + I+ W+ LF+++ PLFG+ +Y LE +C+IK D+S+ +Y+GG I +G +L I +++ + +N I NV + KL L+ L SW Y V+ + ++ + S A+ S L K P LY Sbjct: 85 LSCAVGIPLAIHASIAGTWPYCLEGCKAHAFFIYTFGLVSLVHLAIMAFEKYLTIFKHMSKWGNFLSKRGASLIVVGLWVYCLFFTVPPLFGWAAYGLENGNLTCSIKFDSRHPVDISYYVVMYIGGFFIPLGLILYSYYHINKVKHRVAVRKYASNDVNRVAHIRRNVKYAVKLALLIGGYLLSWAPYSVITFLIVLQVELSDQAVYVPS---LFAKTSFMYNPFLY 309
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Nematostella
Match: EDO42547 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S169]) HSP 1 Score: 56.6102 bits (135), Expect = 1.273e-8 Identity = 31/102 (30.39%), Postives = 59/102 (57.84%), Query Frame = 3 Query: 666 SRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYY---STRKIQLPWNVNQILYV----CWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSH 950 S + GRW+F F+C +F F FG ++I + VIA+ RY+ K + + ++++V W+VG+ ++ PL+G+G Y + ++C++ I+DL+ Sbjct: 78 SLYHGRWIFPQFVCDLDSFTMFAFGSASILTMAVIALNRYFKVVKANKYKRLFGSRKVVWVYCAATWLVGMMFATPPLYGWGLYEYHIQFSTCSL-IWDLNR 178
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Medaka
Match: rgra (RPE-retinal G protein-coupled receptor [Source:NCBI gene;Acc:101157001]) HSP 1 Score: 83.1889 bits (204), Expect = 3.198e-17 Identity = 68/223 (30.49%), Postives = 108/223 (48.43%), Query Frame = 3 Query: 624 SSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWNVNQILYV-CWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSI---GIMFHLFTLSLETRKTEKINSFEKIMN---NVSRKLFLMDLFSWCGYLVLCLIGLVSNQD--SPWAILFSSVSPLLTKFGIALLPMLY 1259 + +G+ + A +AA S F+ W +G CQ + F GF+ +++I+ I IA +RY Y TR +L W+ L V WI FW+ +PL G+G Y E +T CT+ I N+ V +++P+SI GI + S ++ + F+K N N S L + LF W Y +L V++ + SP ++P+L K P+LY Sbjct: 61 ADIGISMNATIAAFSSFLRYWPYGSEGCQTHGFHGFLTALASIHFIAAIAWDRYHQYCTRT-KLQWSTAITLAVLVWIFTAFWAAMPLIGWGEYDYEPLRTCCTLDISKGDRNY---------VSYVIPMSIFNMGIQVFVVMSSYQSIAQK----FQKTGNPRFNASTPLKTL-LFCWGPYGILAFYAAVADANLVSP---KIRMIAPILAKTSPTFNPLLY 265
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Medaka
Match: rgra (RPE-retinal G protein-coupled receptor [Source:NCBI gene;Acc:101157001]) HSP 1 Score: 82.4185 bits (202), Expect = 5.830e-17 Identity = 68/223 (30.49%), Postives = 108/223 (48.43%), Query Frame = 3 Query: 624 SSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY--YSTRKIQLPWNVNQILYV-CWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSI---GIMFHLFTLSLETRKTEKINSFEKIMN---NVSRKLFLMDLFSWCGYLVLCLIGLVSNQD--SPWAILFSSVSPLLTKFGIALLPMLY 1259 + +G+ + A +AA S F+ W +G CQ + F GF+ +++I+ I IA +RY Y TR +L W+ L V WI FW+ +PL G+G Y E +T CT+ I N+ V +++P+SI GI + S ++ + F+K N N S L + LF W Y +L V++ + SP ++P+L K P+LY Sbjct: 61 ADIGISMNATIAAFSSFLRYWPYGSEGCQTHGFHGFLTALASIHFIAAIAWDRYHQYCTRT-KLQWSTAITLAVLVWIFTAFWAAMPLIGWGEYDYEPLRTCCTLDISKGDRNY---------VSYVIPMSIFNMGIQVFVVMSSYQSIAQK----FQKTGNPRFNASTPLKTL-LFCWGPYGILAFYAAVADANLVSP---KIRMIAPILAKTSPTFNPLLY 265
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Medaka
Match: rrh (retinal pigment epithelium-derived rhodopsin homolog [Source:NCBI gene;Acc:101160531]) HSP 1 Score: 77.7962 bits (190), Expect = 3.296e-15 Identity = 59/235 (25.11%), Postives = 111/235 (47.23%), Query Frame = 3 Query: 612 HFIYSSLGVV-LGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNV-----NQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHL-FTLSLETRKTEKINSFEKI---------MNNVSRKLFLMDLFSWCGYLVLCL---IGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 + ++ +GV +G ++A S G W FG CQ YA FG+++I ++ V+A++RY + + L + N ++ W+ +FWS +P+ G+ YA + +CTI + Y +I V F++P++ +MF+ + +S ++ + N + I + +S + +M L +W Y ++CL G +P AI ++PL K P +Y Sbjct: 58 NLAFTDVGVAGIGYPMSAASDIHGSWKFGYTGCQIYAALNIFFGMASIGLLTVVAIDRYLTICRPDLGQKMTMQSYNLLILAAWLNAVFWSSMPIVGWAGYAPDPTGATCTINWRQNDASFVSYTMAVIAVNFVVPLT--VMFYCYYNVSATVKRYKASNCLDSINIDWSDQMDVTKMSIVMIVMFLVAWSPYSMVCLWASFGDPKTIPAPMAI----IAPLFAKSSTFYNPCIY 286
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Medaka
Match: opn5 (opsin-5 [Source:NCBI gene;Acc:101157504]) HSP 1 Score: 74.7146 bits (182), Expect = 4.196e-14 Identity = 59/215 (27.44%), Postives = 106/215 (49.30%), Query Frame = 3 Query: 666 SRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQL-PWNVNQILYVC----WIVGLFWSLLPLFGFGSYALELHQTSCTIK--IFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFE-KIMNNVSRKLFLMD---------LFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 S F RWLFG C+FY + GF FG ++ + V++++RY ++ W Q +++C WI FW+ +PL G+GSYA E TSCT+ + S + Q ++ ++ +LP I + ++ + +++++SF+ +I N+ + ++ L L +W Y V+ ++ DS I S + LL K P++Y Sbjct: 91 SSFSHRWLFGWEGCRFYGWAGFFFGCGSLITMTVVSLDRYLKICHLRYGTWLKRQHIFLCLVFVWIYAAFWATMPLVGWGSYAPEPFGTSCTLDWWLAQASVSGQSFVMSILFFCLVLPAGIIVFSYVMIICKVKSSSKEVSSFDARIKNSHTLEIKLTKVAMLICAGFLIAWIPYAVVSVVSAFGEPDSI-PIPVSVIPTLLAKSSAMYNPIIY 304
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Medaka
Match: opn5 (opsin-5 [Source:NCBI gene;Acc:101157504]) HSP 1 Score: 74.7146 bits (182), Expect = 4.362e-14 Identity = 59/215 (27.44%), Postives = 106/215 (49.30%), Query Frame = 3 Query: 666 SRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQL-PWNVNQILYVC----WIVGLFWSLLPLFGFGSYALELHQTSCTIK--IFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFE-KIMNNVSRKLFLMD---------LFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 S F RWLFG C+FY + GF FG ++ + V++++RY ++ W Q +++C WI FW+ +PL G+GSYA E TSCT+ + S + Q ++ ++ +LP I + ++ + +++++SF+ +I N+ + ++ L L +W Y V+ ++ DS I S + LL K P++Y Sbjct: 93 SSFSHRWLFGWEGCRFYGWAGFFFGCGSLITMTVVSLDRYLKICHLRYGTWLKRQHIFLCLVFVWIYAAFWATMPLVGWGSYAPEPFGTSCTLDWWLAQASVSGQSFVMSILFFCLVLPAGIIVFSYVMIICKVKSSSKEVSSFDARIKNSHTLEIKLTKVAMLICAGFLIAWIPYAVVSVVSAFGEPDSI-PIPVSVIPTLLAKSSAMYNPIIY 306
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Planmine SMEST
Match: SMESG000045023.1 (SMESG000045023.1) HSP 1 Score: 491.5 bits (1264), Expect = 1.344e-172 Identity = 276/310 (89.03%), Postives = 276/310 (89.03%), Query Frame = 3 Query: 342 MFLLIEPCVI*FSNYFNTSVVVICNCFANKKVVL*FSFKLTLFILNFTF*DQXXXXXXXXXXXXXAKLYYDLRNTLQNNQINEDCRKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLYWSVK 1271 MFLLIEP VICNCFANKK DQLYGILLGISGILGAKLYYDLRNTLQNNQINEDCRKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVN ILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLYWSVK Sbjct: 1 MFLLIEP-------------FVICNCFANKK-------------------DQLYGILLGISGILGAKLYYDLRNTLQNNQINEDCRKIHRHFIYSSLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYSTRKIQLPWNVNHILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKLFLMDLFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLYWSVK 278
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Planmine SMEST
Match: SMESG000074489.1 (SMESG000074489.1) HSP 1 Score: 78.9518 bits (193), Expect = 2.462e-15 Identity = 63/239 (26.36%), Postives = 110/239 (46.03%), Query Frame = 3 Query: 627 SLGVVLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYY-------STRKIQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTE--------KIN-SFEKIMNNVSRK-----------LFLMDLFSWCGYLVLCLIGLVSNQD--SPW----AILFSSVSPLLTKFGIAL 1244 + V G L S F RW +G C+ Y F G +FG +IN + +I+++RY+ + + + + + +++V W+ L WS P FG+G+Y E QTSCT S + ++ G+ I F++PV I I+F + + R E K+N S M ++K + + + SW Y ++ L+ L +D +P+ +LF+ S + F A+ Sbjct: 102 TFSAVNGFPLLTISSFNTRWAWGKLTCEIYGFIGGLFGFISINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFV-WLYSLIWSTPPFFGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFIIPVGI-IIFCYYQIVKAVRVHELEMLKMAQKMNASHPTSMKTGAKKADVQAAKISVIIVFLYMLSWTPYAIIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAI 338
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Planmine SMEST
Match: SMESG000025307.1 (SMESG000025307.1) HSP 1 Score: 63.1586 bits (152), Expect = 1.661e-10 Identity = 56/221 (25.34%), Postives = 100/221 (45.25%), Query Frame = 3 Query: 666 SRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY----YSTRKIQLPWNVNQILYV--CWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRK---------TEKINSFEKIM-NNVSRKLFLMD-------LFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 S F W+F C YAF + G+ +I I+ VIA+ER+ Y + ++ I +V CW +G+ S+ PL G+ Y LE Q SC+ +FD S + Y+ ++++G L + I+ + + R T+ N+ ++I + V RKL M + SW Y ++ ++ L + ++L ++ K P++Y Sbjct: 75 SSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYI--MLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIY 293
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Planmine SMEST
Match: SMESG000025307.1 (SMESG000025307.1) HSP 1 Score: 63.1586 bits (152), Expect = 2.046e-10 Identity = 56/221 (25.34%), Postives = 100/221 (45.25%), Query Frame = 3 Query: 666 SRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERY----YSTRKIQLPWNVNQILYV--CWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRK---------TEKINSFEKIM-NNVSRKLFLMD-------LFSWCGYLVLCLIGLVSNQDSPWAILFSSVSPLLTKFGIALLPMLY 1259 S F W+F C YAF + G+ +I I+ VIA+ER+ Y + ++ I +V CW +G+ S+ PL G+ Y LE Q SC+ +FD S + Y+ ++++G L + I+ + + R T+ N+ ++I + V RKL M + SW Y ++ ++ L + ++L ++ K P++Y Sbjct: 80 SSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYI--MLLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTKSFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIY 298
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Planmine SMEST
Match: SMESG000025308.1 (SMESG000025308.1) HSP 1 Score: 55.8398 bits (133), Expect = 3.025e-8 Identity = 46/163 (28.22%), Postives = 81/163 (49.69%), Query Frame = 3 Query: 639 VLGAILAAPSRFVGRWLFGDFLCQFYAFEGFVFGISNINIIVVIAMERYYS-TRKIQLPWNVNQ-----ILYVCWIVGLFWSLLPLFGFGSYALELHQTSCTIKIFDLSHNHQLYMGGLIIVGFLLPVSIGIMFHLFTLSLETRKTEKINSFEKIMNNVSRKL 1109 +LG S F W+F + C YAF V G+ +I I+ ++A+ER +R +++ V++ ++ + W +F S+ PL G+ Y LE SC+ +FD S + Y+ + ++G L V + I+F L L K ++ + ++M SR L Sbjct: 21 ILGFPFLTISGFCKEWIFSEAGCSAYAFSMSVTGMHSIFILTILAVERLKVISRPLKMVKIVSKKRSFLLVLISWTFAIFVSIPPLLGWNRYVLEGLHISCSYDMFDGSWRSKSYI--VFLIGIFLVVLLIIIFCYLALFL---KVQRQATSMRVMIKDSRDL 178 The following BLAST results are available for this feature:
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Retinal pigment epithelium-derived rhodopsin homolog vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30001792 ID=SMED30001792|Name=Retinal pigment epithelium-derived rhodopsin homolog|organism=Schmidtea mediterranea sexual|type=transcript|length=1839bpback to top protein sequence of SMED30001792-orf-1 >SMED30001792-orf-1 ID=SMED30001792-orf-1|Name=SMED30001792-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=167bp MERYYSTRKIQLPWNVNQILYVCWIVGLFWSLLPLFGFGSYALELHQTSCback to top Annotated Terms
The following terms have been associated with this transcript:
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