Y box protein-1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30001546 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 18
Homology
BLAST of Y box protein-1 vs. Ensembl Human
Match: YBX2 (Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]) HSP 1 Score: 73.559 bits (179), Expect = 1.614e-15 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 3 Query: 48 QVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 QV+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 93 QVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVT 161
BLAST of Y box protein-1 vs. Ensembl Human
Match: YBX2 (Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]) HSP 1 Score: 73.559 bits (179), Expect = 1.614e-15 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 3 Query: 48 QVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 QV+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 93 QVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVT 161
BLAST of Y box protein-1 vs. Ensembl Human
Match: YBX1 (Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]) HSP 1 Score: 71.2478 bits (173), Expect = 7.149e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 57 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 126
BLAST of Y box protein-1 vs. Ensembl Human
Match: YBX3 (Y-box binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2428]) HSP 1 Score: 70.8626 bits (172), Expect = 1.334e-14 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 89 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 158
BLAST of Y box protein-1 vs. Ensembl Human
Match: YBX3 (Y-box binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2428]) HSP 1 Score: 70.0922 bits (170), Expect = 1.603e-14 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 89 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 158
BLAST of Y box protein-1 vs. Ensembl Celegans
Match: cey-1 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:O62213]) HSP 1 Score: 73.9442 bits (180), Expect = 9.134e-17 Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V G VKWFN KNGYGFI+ + N +DIFVH +I N SL D EEV+FDIVEG+KGLEA +VT Sbjct: 19 TKVKGTVKWFNVKNGYGFINRTDTN--EDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGSKGLEAASVT 88
BLAST of Y box protein-1 vs. Ensembl Celegans
Match: cey-4 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:G5EDV3]) HSP 1 Score: 60.8474 bits (146), Expect = 1.281e-11 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 42 QSQVVGHVKWFNSKNGYGFISVDND-NSDKDIFVHFKSIAAGNA-----TSLADGEEVLFDIVEGAKGLEARNVT 248 ++ V GHVKWF+ + YGF++ D + ++D FVH +I + +L D E V+FDIVEG KG EA NVT Sbjct: 86 ETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVEGLKGPEAANVT 160
BLAST of Y box protein-1 vs. Ensembl Celegans
Match: cey-4 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:G5EDV3]) HSP 1 Score: 60.8474 bits (146), Expect = 1.281e-11 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 42 QSQVVGHVKWFNSKNGYGFISVDND-NSDKDIFVHFKSIAAGNA-----TSLADGEEVLFDIVEGAKGLEARNVT 248 ++ V GHVKWF+ + YGF++ D + ++D FVH +I + +L D E V+FDIVEG KG EA NVT Sbjct: 86 ETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVEGLKGPEAANVT 160
BLAST of Y box protein-1 vs. Ensembl Celegans
Match: cey-2 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:P91306]) HSP 1 Score: 60.8474 bits (146), Expect = 1.367e-11 Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 51 VVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT------SLADGEEVLFDIVEGAKGLEARNVT 248 + G VKW++ YGFIS ++ +KDIFVH +IA +AT +L D EEVLFD+VEG G EA NVT Sbjct: 66 LQGKVKWYSVLRRYGFIS--RNDGEKDIFVHQTAIAK-SATEKFYLRTLGDDEEVLFDLVEGKNGPEAANVT 134
BLAST of Y box protein-1 vs. Ensembl Celegans
Match: cey-3 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:P91398]) HSP 1 Score: 59.3066 bits (142), Expect = 4.085e-11 Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 33 IMAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT-----SLADGEEVLFDIVEGAKGLEARNVT 248 I+ + + G VKW++ YGFIS + +KD+FVH +I+ + +LAD EEVLFD+V+G G EA NVT Sbjct: 58 IVLTAGLQGKVKWYSVLRRYGFIS--RSDGEKDVFVHQTAISKSDTEKFYLRTLADEEEVLFDLVDGKNGPEAANVT 132
BLAST of Y box protein-1 vs. Ensembl Fly
Match: yps (gene:FBgn0022959 transcript:FBtr0076027) HSP 1 Score: 66.2402 bits (160), Expect = 2.549e-13 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 24 TNSIMAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 T ++A ++V G VKWFN K+GYGFI + +++ +D+FVH +IA N S+ DGE V FD+V G KG EA NVT Sbjct: 54 TKEVIA-TKVTGTVKWFNVKSGYGFI--NRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVT 129
BLAST of Y box protein-1 vs. Ensembl Fly
Match: yps (gene:FBgn0022959 transcript:FBtr0305992) HSP 1 Score: 66.2402 bits (160), Expect = 2.696e-13 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 24 TNSIMAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 T ++A ++V G VKWFN K+GYGFI + +++ +D+FVH +IA N S+ DGE V FD+V G KG EA NVT Sbjct: 54 TKEVIA-TKVTGTVKWFNVKSGYGFI--NRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVT 129
BLAST of Y box protein-1 vs. Ensembl Fly
Match: lin-28 (gene:FBgn0035626 transcript:FBtr0077090) HSP 1 Score: 48.521 bits (114), Expect = 2.395e-7 Identity = 25/65 (38.46%), Postives = 37/65 (56.92%), Query Frame = 3 Query: 54 VGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 +G KWFN G+GF++ ND +++FVH I SL + EEV F+ ++GLEA V+ Sbjct: 40 LGKCKWFNVAKGWGFLT-PNDGG-QEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATRVS 102
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 72.0182 bits (175), Expect = 2.525e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 37 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 106
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 72.0182 bits (175), Expect = 2.525e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 37 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 106
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 71.633 bits (174), Expect = 3.981e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 37 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 106
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Match: lin28b (lin-28 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140811-1]) HSP 1 Score: 53.5286 bits (127), Expect = 6.057e-9 Identity = 26/69 (37.68%), Postives = 38/69 (55.07%), Query Frame = 3 Query: 57 GHVKWFNSKNGYGFISVDND-----NSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 G+ KWFN + G+GFIS+ + + D+FVH + SL +GE+V F +KGLE+ VT Sbjct: 23 GYCKWFNVRMGFGFISMTSSEGKPVDPPLDVFVHQSKLVMEGFRSLREGEQVEFTFKRSSKGLESLRVT 91
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Match: LIN28A (si:ch1073-284b18.2 [Source:ZFIN;Acc:ZDB-GENE-110914-157]) HSP 1 Score: 49.6766 bits (117), Expect = 1.370e-7 Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 3 Query: 54 VGHVKWFNSKNGYGFISVDNDN-----SDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 VG KWFN + G+GF+S++ + + D+FVH + SL +GE V F + +KGLE+ VT Sbjct: 25 VGVCKWFNVRMGFGFLSMNTRDGVPLETPVDVFVHQSKLHMEGFRSLKEGESVEFTFKKSSKGLESVRVT 94
BLAST of Y box protein-1 vs. Ensembl Xenopus
Match: hmgcs1 (3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:Xenbase;Acc:XB-GENE-942074]) HSP 1 Score: 71.633 bits (174), Expect = 5.273e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 35 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 104
BLAST of Y box protein-1 vs. Ensembl Xenopus
Match: hmgcs1 (3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:Xenbase;Acc:XB-GENE-942074]) HSP 1 Score: 70.8626 bits (172), Expect = 8.612e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 43 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 112
BLAST of Y box protein-1 vs. Ensembl Xenopus
Match: ybx3 (Y-box binding protein 3 [Source:NCBI gene;Acc:548572]) HSP 1 Score: 66.6254 bits (161), Expect = 1.949e-13 Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 ++V G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+V G KG EA NVT Sbjct: 34 TKVQGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVAGEKGAEAANVT 103
BLAST of Y box protein-1 vs. Ensembl Xenopus
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:100216028]) HSP 1 Score: 52.373 bits (124), Expect = 3.138e-8 Identity = 26/69 (37.68%), Postives = 36/69 (52.17%), Query Frame = 3 Query: 57 GHVKWFNSKNGYGFISVDNDNSDK-----DIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 GH KWFN + G+GFIS+ + D+FVH + SL +GE V F + +KG E+ VT Sbjct: 35 GHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGEPVEFTFKKSSKGFESLRVT 103
BLAST of Y box protein-1 vs. Ensembl Xenopus
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:100216028]) HSP 1 Score: 52.373 bits (124), Expect = 3.159e-8 Identity = 26/69 (37.68%), Postives = 36/69 (52.17%), Query Frame = 3 Query: 57 GHVKWFNSKNGYGFISVDNDNSDK-----DIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 GH KWFN + G+GFIS+ + D+FVH + SL +GE V F + +KG E+ VT Sbjct: 59 GHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGEPVEFTFKKSSKGFESLRVT 127
BLAST of Y box protein-1 vs. Ensembl Mouse
Match: Ybx2 (Y box protein 2 [Source:MGI Symbol;Acc:MGI:1096372]) HSP 1 Score: 72.7886 bits (177), Expect = 1.233e-15 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 3 Query: 48 QVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 QV+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 17 QVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 85
BLAST of Y box protein-1 vs. Ensembl Mouse
Match: Ybx2 (Y box protein 2 [Source:MGI Symbol;Acc:MGI:1096372]) HSP 1 Score: 73.1738 bits (178), Expect = 1.347e-15 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 3 Query: 48 QVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 QV+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 94 QVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 162
BLAST of Y box protein-1 vs. Ensembl Mouse
Match: Ybx1 (Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]) HSP 1 Score: 71.633 bits (174), Expect = 4.255e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 55 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 124
BLAST of Y box protein-1 vs. Ensembl Mouse
Match: Ybx3 (Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]) HSP 1 Score: 71.2478 bits (173), Expect = 5.174e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 81 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 150
BLAST of Y box protein-1 vs. Ensembl Mouse
Match: Ybx3 (Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]) HSP 1 Score: 71.2478 bits (173), Expect = 5.932e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 81 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 150
BLAST of Y box protein-1 vs. UniProt/SwissProt
Match: sp|P45441|YBX2B_XENLA (Y-box-binding protein 2-B OS=Xenopus laevis OX=8355 GN=ybx2-b PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.972e-15 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 27 NSIMAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 N + +QV G VKWFN +NGYGFI + ++S +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 34 NKKLLATQVQGTVKWFNVRNGYGFI--NRNDSKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 109
BLAST of Y box protein-1 vs. UniProt/SwissProt
Match: sp|P41824|YBOXH_APLCA (Y-box factor homolog OS=Aplysia californica OX=6500 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.944e-15 Identity = 39/72 (54.17%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 SQV G VKWFN K+GYGFI + D++ +D+FVH +I N S+ DGE+V FD+VEG KG EA NVT Sbjct: 31 SQVSGTVKWFNVKSGYGFI--NRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANVT 100
BLAST of Y box protein-1 vs. UniProt/SwissProt
Match: sp|Q9Y2T7|YBOX2_HUMAN (Y-box-binding protein 2 OS=Homo sapiens OX=9606 GN=YBX2 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 7.752e-15 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 3 Query: 48 QVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 QV+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 93 QVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVT 161
BLAST of Y box protein-1 vs. UniProt/SwissProt
Match: sp|P21574|YBX2A_XENLA (Y-box-binding protein 2-A OS=Xenopus laevis OX=8355 GN=ybx2-a PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.092e-14 Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 +QV G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 40 TQVQGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 109
BLAST of Y box protein-1 vs. UniProt/SwissProt
Match: sp|Q9KN00|CSPA_VIBCH (Cold shock-like protein CspA OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=cspA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.712e-14 Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 36 MAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 M+Q ++ G VKWFN G+GFIS DN +D+FVHFKSI + +LA+G+ V F + +G KG +A VT Sbjct: 1 MSQ-KMTGSVKWFNETKGFGFIS--QDNGGQDVFVHFKSIVSEGFKTLAEGQRVSFTVEQGKKGPQAAQVT 68
BLAST of Y box protein-1 vs. TrEMBL
Match: I1ZIB0 (Y box protein-1 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.567e-34 Identity = 77/99 (77.78%), Postives = 84/99 (84.85%), Query Frame = 3 Query: 33 IMAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVTXXXXXXXXXXAQH---DHSNNRGGDRD 320 IM SQV GHVKWF+SKNGYGFISVD+DN+ KDIFVH SI A NATSLADGEEVLFDIV+GAKGLEARNVTGP+GGDV+GG + D SNNR GDRD Sbjct: 17 IMTASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNR-GDRD 114
BLAST of Y box protein-1 vs. TrEMBL
Match: A0A3N5Z465 (Cold-shock protein OS=Alteromonas sp. U0105 OX=2259342 GN=DRW07_17875 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.870e-15 Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNV 245 S+V G VKWFN++ GYGF++ DN +KD+FVHF++I A +L +G+ V F+I EG KGL+A NV Sbjct: 2 SKVTGTVKWFNAEKGYGFLT--QDNGEKDVFVHFRAIVAEGYKTLLEGQRVEFEIEEGQKGLQAANV 66
BLAST of Y box protein-1 vs. TrEMBL
Match: A0A3D8M3N3 (Cold-shock protein OS=Alteromonas aestuariivivens OX=1938339 GN=DXV75_15155 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.795e-15 Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 S+V G VKWFN+ GYGF++ D+ DKD+FVHF++I + +LA+G+ V F++ +G KGL+A NVT Sbjct: 2 SKVTGTVKWFNADKGYGFLT--QDSGDKDVFVHFRAIVSEGYKTLAEGQRVEFEVEQGQKGLQAANVT 67
BLAST of Y box protein-1 vs. TrEMBL
Match: G0MVG4 (CBN-CEY-1 protein OS=Caenorhabditis brenneri OX=135651 GN=Cbn-cey-1 PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.478e-15 Identity = 44/79 (55.70%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 24 TNSIMAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 T + ++V G VKWFN KNGYGFI+ + N +DIFVH +I N SL D EEVLFDIVEG+KGLEA NVT Sbjct: 12 TEKPVKATKVKGTVKWFNVKNGYGFINRTDTN--EDIFVHQTAIINNNPNKYLRSLGDNEEVLFDIVEGSKGLEASNVT 88
BLAST of Y box protein-1 vs. TrEMBL
Match: A0A3M7PA90 (Y-box factor-like protein OS=Brachionus plicatilis OX=10195 GN=BpHYR1_037785 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.064e-14 Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 18 KFTNSIMAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 K + +V G VKWFN KNGYGFIS+ D+ ++DIF+H IA N S+ +GE+V FDIV+G KGLEA N+T Sbjct: 26 KIVQKPLIDQKVTGTVKWFNVKNGYGFISL--DDREEDIFIHHSGIARNNPKKQQKSVGEGEKVEFDIVQGEKGLEAANLT 104
BLAST of Y box protein-1 vs. Ensembl Cavefish
Match: ybx1 (Y-box binding protein 1 [Source:NCBI gene;Acc:103040011]) HSP 1 Score: 70.8626 bits (172), Expect = 6.236e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 38 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 107
BLAST of Y box protein-1 vs. Ensembl Cavefish
Match: YBX2 (Y-box-binding protein 2-A-like [Source:NCBI gene;Acc:103036193]) HSP 1 Score: 65.4698 bits (158), Expect = 5.340e-13 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 3 Query: 51 VVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 V G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VE KG EA NVT Sbjct: 31 VQGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEIVEFDVVEATKGSEAANVT 98
BLAST of Y box protein-1 vs. Ensembl Cavefish
Match: YBX2 (Y-box-binding protein 2-A-like [Source:NCBI gene;Acc:103036193]) HSP 1 Score: 65.4698 bits (158), Expect = 5.390e-13 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 30 SIMAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNA----TSLADGEEVLFDIVEGAKGLEARNVT 248 SI+A + V G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VE KG EA NVT Sbjct: 18 SIVA-TLVQGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEIVEFDVVEATKGSEAANVT 91
BLAST of Y box protein-1 vs. Ensembl Cavefish
Match: lin28b (protein lin-28 homolog B-like [Source:NCBI gene;Acc:103047343]) HSP 1 Score: 53.1434 bits (126), Expect = 6.314e-9 Identity = 26/69 (37.68%), Postives = 38/69 (55.07%), Query Frame = 3 Query: 57 GHVKWFNSKNGYGFISVDNDNSDK-----DIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 G+ KWFN + G+GFIS+ + + D+FVH + SL +GE+V F +KGLE+ VT Sbjct: 29 GYCKWFNVRMGFGFISMTHSEGNPVEPPLDVFVHQSKLVMEGFRSLREGEQVEFTFKRSSKGLESLRVT 97
BLAST of Y box protein-1 vs. Ensembl Cavefish
Match: LIN28B (protein lin-28 homolog A [Source:NCBI gene;Acc:103022253]) HSP 1 Score: 52.7582 bits (125), Expect = 1.219e-8 Identity = 27/69 (39.13%), Postives = 37/69 (53.62%), Query Frame = 3 Query: 57 GHVKWFNSKNGYGFISVDNDNSDK-----DIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 GH KWFN + G+GFIS+ + + D+FVH + SL +GE V F + +KGLE VT Sbjct: 39 GHCKWFNVRMGFGFISMTSRGGNPIDPPLDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLECVRVT 107
BLAST of Y box protein-1 vs. Ensembl Nematostella
Match: EDO41469 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S475]) HSP 1 Score: 73.559 bits (179), Expect = 5.074e-18 Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3 Query: 33 IMAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 +A ++V G VKWFN KNGYGFI + D++ +DIFVH +IA N S+ DGE V F++V G KGLEA NVT Sbjct: 2 FIAATKVTGTVKWFNVKNGYGFI--NRDDNKEDIFVHQTAIAKNNPKKYLRSVGDGEVVEFNVVSGTKGLEASNVT 75
BLAST of Y box protein-1 vs. Ensembl Nematostella
Match: EDO44703 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RV03]) HSP 1 Score: 47.3654 bits (111), Expect = 4.630e-7 Identity = 28/64 (43.75%), Postives = 35/64 (54.69%), Query Frame = 3 Query: 57 GHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 G VKWFN G+GFI+ D+ +D+FVH +I A SL +GE V I KG A VT Sbjct: 485 GSVKWFNLIKGFGFIT--RDDGGEDVFVHQSAIKASGYRSLEEGEHVQLTISNSDKGKVAICVT 546
BLAST of Y box protein-1 vs. Ensembl Medaka
Match: ybx1 (Y-box binding protein 1 [Source:NCBI gene;Acc:100049221]) HSP 1 Score: 70.4774 bits (171), Expect = 6.763e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 45 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 ++V+G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD+VEG KG EA NVT Sbjct: 39 TKVLGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 108
BLAST of Y box protein-1 vs. Ensembl Medaka
Match: ENSORLT00000007880.2 (Y-box binding protein 2 [Source:NCBI gene;Acc:100049372]) HSP 1 Score: 68.1662 bits (165), Expect = 8.059e-14 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 3 Query: 51 VVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 V G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD++E AKG EA NVT Sbjct: 112 VQGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVT 179
BLAST of Y box protein-1 vs. Ensembl Medaka
Match: ENSORLT00000007875.2 (Y-box binding protein 2 [Source:NCBI gene;Acc:100049372]) HSP 1 Score: 67.781 bits (164), Expect = 1.039e-13 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 3 Query: 51 VVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNAT----SLADGEEVLFDIVEGAKGLEARNVT 248 V G VKWFN +NGYGFI + +++ +D+FVH +I N S+ DGE V FD++E AKG EA NVT Sbjct: 112 VQGTVKWFNVRNGYGFI--NRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVT 179
BLAST of Y box protein-1 vs. Ensembl Medaka
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:101160951]) HSP 1 Score: 53.5286 bits (127), Expect = 5.622e-9 Identity = 27/69 (39.13%), Postives = 37/69 (53.62%), Query Frame = 3 Query: 57 GHVKWFNSKNGYGFISVDNDNSDK-----DIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 G KWFN + G+GFIS+ N D+FVH + SL +GE+V F + +KGLE+ VT Sbjct: 35 GFCKWFNVRMGFGFISMTNSEGSPVEPPLDVFVHQSKLVMEGFRSLKEGEQVEFTYKKSSKGLESLRVT 103
BLAST of Y box protein-1 vs. Ensembl Medaka
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:101160951]) HSP 1 Score: 53.5286 bits (127), Expect = 5.723e-9 Identity = 27/69 (39.13%), Postives = 37/69 (53.62%), Query Frame = 3 Query: 57 GHVKWFNSKNGYGFISVDNDNSDK-----DIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 G KWFN + G+GFIS+ N D+FVH + SL +GE+V F + +KGLE+ VT Sbjct: 42 GFCKWFNVRMGFGFISMTNSEGSPVEPPLDVFVHQSKLVMEGFRSLKEGEQVEFTYKKSSKGLESLRVT 110
BLAST of Y box protein-1 vs. Planmine SMEST
Match: SMESG000058013.1 (SMESG000058013.1) HSP 1 Score: 159.844 bits (403), Expect = 2.286e-51 Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 3 Query: 36 MAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVTXXXXXXXXXXAQHDHSNNRGGDRD 320 MAQSQV+GHVKWFNSKNGYGFISVDN+ +DKD+FVHFKSIAA NATSLADGEEVLFDIVEGAKGLEARNVTGPDGGDVVGGAQHDHSNNRGGDRD Sbjct: 1 MAQSQVIGHVKWFNSKNGYGFISVDNERNDKDVFVHFKSIAATNATSLADGEEVLFDIVEGAKGLEARNVTGPDGGDVVGGAQHDHSNNRGGDRD 95
BLAST of Y box protein-1 vs. Planmine SMEST
Match: SMESG000058043.1 (SMESG000058043.1) HSP 1 Score: 153.68 bits (387), Expect = 8.637e-49 Identity = 90/99 (90.91%), Postives = 92/99 (92.93%), Query Frame = 3 Query: 36 MAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVTXXXXXXXXXXAQH----DHSNNRGGDRD 320 MAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVTGP+GGDVVGGA + D NNRGGDRD Sbjct: 1 MAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVTGPNGGDVVGGAPYEQNNDRFNNRGGDRD 99
BLAST of Y box protein-1 vs. Planmine SMEST
Match: SMESG000058039.1 (SMESG000058039.1) HSP 1 Score: 145.976 bits (367), Expect = 9.195e-46 Identity = 85/99 (85.86%), Postives = 89/99 (89.90%), Query Frame = 3 Query: 36 MAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVTXXXXXXXXXXAQH----DHSNNRGGDRD 320 MAQSQV GHVKWFNSKNGYGFISVDN+ DKD+FVHFKSIAA NATSLADGEEVLFDIVEGAKGLEARNVTGP+GGDVVGGAQ+ D NNRGGDRD Sbjct: 1 MAQSQVTGHVKWFNSKNGYGFISVDNERCDKDVFVHFKSIAATNATSLADGEEVLFDIVEGAKGLEARNVTGPNGGDVVGGAQYEQNNDRFNNRGGDRD 99
BLAST of Y box protein-1 vs. Planmine SMEST
Match: SMESG000058066.1 (SMESG000058066.1) HSP 1 Score: 125.176 bits (313), Expect = 5.051e-37 Identity = 76/98 (77.55%), Postives = 83/98 (84.69%), Query Frame = 3 Query: 36 MAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVTXXXXXXXXXXAQH---DHSNNRGGDRD 320 M SQV GHVKWF+SKNGYGFISVD+DN+ KDIFVH SI A NATSLADGEEVLFDIV+GAKGLEARNVTGP+GGDV+GG + D SNNR GDRD Sbjct: 1 MTASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNR-GDRD 97
BLAST of Y box protein-1 vs. Planmine SMEST
Match: SMESG000073546.1 (SMESG000073546.1) HSP 1 Score: 98.5969 bits (244), Expect = 2.418e-26 Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 21 FTNSIMAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVT 248 T+ + +S+V GHVKWFN+K+GYGFI D D +D +FVH SI A N+ SLADGEEVLFD++EG KGLEARNV Sbjct: 1 MTDYDIKESKVTGHVKWFNTKSGYGFIKKDVDGAD--VFVHHSSITATNSNSLADGEEVLFDVIEGPKGLEARNVC 74 The following BLAST results are available for this feature:
BLAST of Y box protein-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Y box protein-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Y box protein-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Y box protein-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Y box protein-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Y box protein-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Y box protein-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30001546 ID=SMED30001546|Name=Y box protein-1|organism=Schmidtea mediterranea sexual|type=transcript|length=453bpback to top protein sequence of SMED30001546-orf-1 >SMED30001546-orf-1 ID=SMED30001546-orf-1|Name=SMED30001546-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=123bp MAQSQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADback to top Annotated Terms
The following terms have been associated with this transcript:
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