mTERF domain containing 1

Overview
NamemTERF domain containing 1
Smed IDSMED30001383
Length (bp)2007
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of mTERF domain containing 1 (SMED30001383) t-SNE clustered cells

Violin plots show distribution of expression levels for mTERF domain containing 1 (SMED30001383) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of mTERF domain containing 1 (SMED30001383) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for mTERF domain containing 1 (SMED30001383) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30001383

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30001383SMESG000028457.1 SmedASXL_014497SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30001383SMESG000028457.1 SmedASXL_014497SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Human
Match: MTERF3 (mitochondrial transcription termination factor 3 [Source:HGNC Symbol;Acc:HGNC:24258])

HSP 1 Score: 128.642 bits (322), Expect = 2.442e-32
Identity = 75/269 (27.88%), Postives = 143/269 (53.16%), Query Frame = 3 
Query:  969 IEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            ++ + TL  L+  GVDL +IE +    N+L RL+++  +  ++ F+K+    ED QL    +    IF ++L +++    YL S+NF+ +D+  ++     +LN +   L+ R    ++ ++L+ ++   LV++  R+L  ++  +K  +      +GF   E+++++   PK+L  +K  L+  F F+H  +++ H  IV            + ER  +L +L R Q DP +P Y  +  + S+ +  FCE+IA  S+  F KF+KTL
Sbjct:   29 VDHSETLQKLVLLGVDLSKIEKHPEAANLLLRLDFEKDIKQMLLFLKD-VGIEDNQLGAFLTKNHAIFSEDLENLKTRVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLLTGSLEPVKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNVMSIPHHIIVKFPQVFNTRLFKVKERHLFLTYLGRAQYDPAKPNYISLDKLVSIPDEIFCEEIAKASVQDFEKFLKTL 296
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Human
Match: MTERF3 (mitochondrial transcription termination factor 3 [Source:HGNC Symbol;Acc:HGNC:24258])

HSP 1 Score: 127.487 bits (319), Expect = 4.809e-31
Identity = 75/269 (27.88%), Postives = 143/269 (53.16%), Query Frame = 3 
Query:  969 IEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            ++ + TL  L+  GVDL +IE +    N+L RL+++  +  ++ F+K+    ED QL    +    IF ++L +++    YL S+NF+ +D+  ++     +LN +   L+ R    ++ ++L+ ++   LV++  R+L  ++  +K  +      +GF   E+++++   PK+L  +K  L+  F F+H  +++ H  IV            + ER  +L +L R Q DP +P Y  +  + S+ +  FCE+IA  S+  F KF+KTL
Sbjct:  150 VDHSETLQKLVLLGVDLSKIEKHPEAANLLLRLDFEKDIKQMLLFLKD-VGIEDNQLGAFLTKNHAIFSEDLENLKTRVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLLTGSLEPVKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNVMSIPHHIIVKFPQVFNTRLFKVKERHLFLTYLGRAQYDPAKPNYISLDKLVSIPDEIFCEEIAKASVQDFEKFLKTL 417
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Human
Match: MTERF3 (mitochondrial transcription termination factor 3 [Source:HGNC Symbol;Acc:HGNC:24258])

HSP 1 Score: 90.1225 bits (222), Expect = 8.220e-19
Identity = 52/201 (25.87%), Postives = 109/201 (54.23%), Query Frame = 3 
Query:  969 IEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIV 1571
            ++ + TL  L+  GVDL +IE +    N+L RL+++  +  ++ F+K+    ED QL    +    IF ++L +++    YL S+NF+ +D+  ++     +LN +   L+ R    ++ ++L+ ++   LV++  R+L  ++  +K  +      +GF   E+++++   PK+L  +K  L+  F F+H  +++ H  IV
Sbjct:  150 VDHSETLQKLVLLGVDLSKIEKHPEAANLLLRLDFEKDIKQMLLFLKD-VGIEDNQLGAFLTKNHAIFSEDLENLKTRVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLLTGSLEPVKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNVMSIPHHIIV 349
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Human
Match: MTERF3 (mitochondrial transcription termination factor 3 [Source:HGNC Symbol;Acc:HGNC:24258])

HSP 1 Score: 55.0694 bits (131), Expect = 4.041e-8
Identity = 51/228 (22.37%), Postives = 93/228 (40.79%), Query Frame = 3 
Query: 1092 LISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            ++ F+K+    ED QL    +    IF ++L +++    YL S+NF+ +D+  ++     +LN +                                           V +L   +GF ++E++  V  +  ++++           L R L  S E +  +          + ER  +L +L R Q DP +P Y  +  + S+ +  FCE+IA  S+  F KF+KTL
Sbjct:    1 MLLFLKD-VGIEDNQLGAFLTKNHAIFSEDLENLKTRVAYLHSKNFSKADVAQMVRKAPFLLNFS-------------------------------------------VERLDNRLGFFQKELELSVKKTRDLVVR-----------LPRLLTGSLEPVKENMKVFNTRLFKVKERHLFLTYLGRAQYDPAKPNYISLDKLVSIPDEIFCEEIAKASVQDFEKFLKTL 173
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Human
Match: MTERF4 (mitochondrial transcription termination factor 4 [Source:HGNC Symbol;Acc:HGNC:28785])

HSP 1 Score: 50.8322 bits (120), Expect = 5.595e-6
Identity = 54/205 (26.34%), Postives = 90/205 (43.90%), Query Frame = 3 
Query: 1176 KNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQN-----IASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            + L+DI   F+ L     N   +  ++  +  +L L    + KR   +++L  L   ++ +++     I       I   V  L +   FT ++V  I+   P VL +    L   F + +  + + H  IV  S  L    + + +R  YL  L R+QT P +   T I N     I  V+EAEF  + A TS+ +F+ F K L
Sbjct:  122 QQLLDIISEFILL---GLNPEPVCVVLKKSPQLLKLPIMQMRKRSSYLQKL-GLGEGKLKRVLYCCPEIFTMRQQDINDTVRLLKEKCLFTVQQVTKILHSCPSVLREDLGQLEYKFQYAYFRMGIKHPDIV-KSEYLQYSLTKIKQRHIYLERLGRYQT-PDKKGQTQIPNPLLKDILRVSEAEFLARTACTSVEEFQVFKKLL 320
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Celegans
Match: C50F4.12 (pep chromosome:WBcel235:V:9537672:9539738:-1 gene:WBGene00008236.1 transcript:C50F4.12.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C50F4.12)

HSP 1 Score: 68.1662 bits (165), Expect = 7.040e-12
Identity = 56/243 (23.05%), Postives = 108/243 (44.44%), Query Frame = 3 
Query:  918 LDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKR 1646
             D  E  P    +I P +  +  L  L+  GVDL EIE        L RL  +  V   I  M+ +  FE+  +    +  P    +++ D++    YL+ + F  S+   I+      LN    L++ R   +++   L+ +   ++++K  RI++     I+  V   +K + FT  ++K +VM+ P++ M     +S  + ++   + +++E I+     L    S +  R  +L  L R
Sbjct:  134 FDPSELPPVHSHSIVPFVNHSPLLRFLVDIGVDLAEIENTTTVGKHLLRLQIE-DVRQKIELMQNEIGFENEAIGPYLTRNPFFLIQDVNDMQTRLNYLELKKFTKSERLKIVDEYRYWLNCNVQLIDSRLGWLQQQFKLSAKATREIIVKEPRIIMFGTGPIERLVKMFNKELNFTTNQLKMLVMEDPRIFMMDSKLVSKTYKYVRDVMKINNETILEHPFILRCSLSVIKSRHDFLKRLGR 375
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Fly
Match: mTerf3 (gene:FBgn0037008 transcript:FBtr0078215)

HSP 1 Score: 120.553 bits (301), Expect = 2.239e-29
Identity = 78/304 (25.66%), Postives = 148/304 (48.68%), Query Frame = 3 
Query:  861 ESNKQISIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKT 1772
            E +K+++++   RE          + P+   N+A  +  ++TL   L  GVDL+ IE  +   + + +L+++  V P I+F+ +Q    D     +F+  P +F+++L D++    YLKS+ F+      I+  N   L  +   +++R    ++   L+  ++  L  +    +  NM  ++ +V  L + MGF  +E+ ++V+  P++LM   DDL   F+++H+ + + H  IV     L      L ER ++L  L R Q DP + LY   + I       F   +A + +  F  F+KT
Sbjct:   62 EGSKEVALDFRNREA---------HVPS--FNLAAYVNNSSTLQQFLSLGVDLHSIERRKGLGDFVLKLDFEKNVKPYITFLVDQGVSPD-DFGRMFTKNPLLFKEDLDDLQTRVNYLKSKRFSDEARQRILTQNPYWLMFSTRRVDRRLGYFQKEFKLSGHDLRLLATREPNAITYNMEHLRKSVFTLKEEMGFNAKELSDLVVRKPRLLMIPPDDLVERFSYIHQDMGLPHAQIVQCPELLASREFRLRERHEFLKLLGRAQYDPQKDLYISPKTIVEGNNFYFVRNVAKSDLETFDLFLKT 353
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Zebrafish
Match: mterf3 (mitochondrial transcription termination factor 3 [Source:ZFIN;Acc:ZDB-GENE-040718-359])

HSP 1 Score: 124.405 bits (311), Expect = 2.851e-30
Identity = 74/279 (26.52%), Postives = 142/279 (50.90%), Query Frame = 3 
Query:  939 PTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            P     + P +EK+ TL  L++ GV+L+++E   N  +ML RL++   V P + F+++    E+  L  + +  P I  ++L +++    YLKS+ F++  + +++     +LN +   L+ R    ++ + L+ E+   LV +  ++L  ++  +K  +       GF   E+++IV   PKVL+ +K  L+  F F+H  +N+ H  I      L      + ER  +L +L R Q  P +P Y  +  +  + +  FC ++A  ++  F +F KTL
Sbjct:  125 PADSFTLRPYVEKSETLSKLVQLGVNLWDLEQRPNVGSMLVRLDFQADVAPRLLFLRD-LGVEESALGRLLTKNPFILAESLDNLQARVSYLKSKKFSAQSVAAMVTKAPYLLNFSVERLDNRLGFFQQQLGLSAEKTRNLVTRLPKLLCGSLEPVKENLKVCELEFGFRGNEIQHIVSTVPKVLLANKRKLTQIFDFVHNTMNIPHSLIAKFPQVLNAKFLRIRERHLFLEYLGRAQYQPDQPNYISLSRLVFLPDDVFCSEVALATLEDFERFQKTL 402
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Zebrafish
Match: mterf3 (mitochondrial transcription termination factor 3 [Source:ZFIN;Acc:ZDB-GENE-040718-359])

HSP 1 Score: 62.7734 bits (151), Expect = 3.416e-11
Identity = 35/137 (25.55%), Postives = 74/137 (54.01%), Query Frame = 3 
Query:  939 PTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEE 1349
            P     + P +EK+ TL  L++ GV+L+++E   N  +ML RL++   V P + F+++    E+  L  + +  P I  ++L +++    YLKS+ F++  + +++     +LN +   L+ R    ++ + L+ E+
Sbjct:   12 PADSFTLRPYVEKSETLSKLVQLGVNLWDLEQRPNVGSMLVRLDFQADVAPRLLFLRD-LGVEESALGRLLTKNPFILAESLDNLQARVSYLKSKKFSAQSVAAMVTKAPYLLNFSVERLDNRLGFFQQQLGLSAEK 147
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Xenopus
Match: MTERF3 (mitochondrial transcription termination factor 3 [Source:NCBI gene;Acc:394691])

HSP 1 Score: 117.087 bits (292), Expect = 1.570e-27
Identity = 72/279 (25.81%), Postives = 136/279 (48.75%), Query Frame = 3 
Query:  939 PTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            P     +   ++++ TL  L+  GVDL ++E   N  N L RL+++  V   + F+K+    ED QL    S  P I  ++L ++++   YL+ + F+   +  ++     +LN +   L+ R    +  + L+TE+   L+I+  R+L  ++  ++  +      +GF + E+++I +  PK+L  +K  L   F ++H  + + H  IV            + ER  +L FL R   DP +P Y  +  + S     FC ++A  S+  + +F+KTL
Sbjct:  141 PPASFTLQDYVDQSETLKKLVLLGVDLSKLEKRPNVANFLLRLDFERDVSRFLLFLKD-VGLEDSQLGAFLSKNPFILSEDLENLQKRVSYLRLKEFSKEAVARMVAKAPYLLNFSIERLDNRLGFFQRELGLSTEKTRDLIIRLPRLLTGSLEPVRENLKVCEIELGFKKNEIQHIAIKVPKILTANKKKLMETFDYVHNIMGIPHHLIVKFPQVFNTKLLKMKERHLFLGFLGRAVYDPTKPNYVSLDKLTSTPNEIFCVEVAKASVQDYERFLKTL 418
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Mouse
Match: Mterf3 (mitochondrial transcription termination factor 3 [Source:MGI Symbol;Acc:MGI:1913660])

HSP 1 Score: 132.109 bits (331), Expect = 9.837e-33
Identity = 79/292 (27.05%), Postives = 154/292 (52.74%), Query Frame = 3 
Query:  900 EIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            E + I++      P     +A  ++ + TL  L++ GVDL +IE + +  N+L RL+++  +  ++ F+K+    ED QL    +    IF ++L +++    YL+S+NF+ +D+  ++ +   +L+ +   L+ R    ++ ++L  ++   LV++  R+L  ++  +K  +   H  +GF   E++++V+  PK+L  +K  L+  F ++H  +N+ H  IV            + ER  +L +L R Q DP +P Y  +    S  +  FC++IA  S+  F KF+KTL
Sbjct:  122 EEEAIQIAAYSPLPISSFTLADYVDHSKTLQKLVQLGVDLSKIEKHPDAANLLLRLDFEKHIKQILLFLKD-LGLEDNQLGPFLTKNYAIFSEDLENLKTRVAYLQSKNFSKTDIARMVKNAPFLLSFSVERLDNRLGFFQKELELNVKKTRDLVVRLPRLLTGSLEPVKENMKVYHLELGFKHNEIQHMVIKIPKMLTANKRKLTEIFDYVHNVMNIPHHIIVKFPQLFNTRVFKIKERHLFLAYLGRAQYDPAKPNYVSLDKFVSFPDKIFCKEIAKASLNDFEKFLKTL 412
[Close]
BLAST of mTERF domain containing 1 vs. UniProt/SwissProt
Match: sp|Q8R3J4|MTEF3_MOUSE (Transcription termination factor 3, mitochondrial OS=Mus musculus OX=10090 GN=Mterf3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 6.881e-32
Identity = 79/292 (27.05%), Postives = 154/292 (52.74%), Query Frame = 3 
Query:  900 EIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            E + I++      P     +A  ++ + TL  L++ GVDL +IE + +  N+L RL+++  +  ++ F+K+    ED QL    +    IF ++L +++    YL+S+NF+ +D+  ++ +   +L+ +   L+ R    ++ ++L  ++   LV++  R+L  ++  +K  +   H  +GF   E++++V+  PK+L  +K  L+  F ++H  +N+ H  IV            + ER  +L +L R Q DP +P Y  +    S  +  FC++IA  S+  F KF+KTL
Sbjct:  122 EEEAIQIAAYSPLPISSFTLADYVDHSKTLQKLVQLGVDLSKIEKHPDAANLLLRLDFEKHIKQILLFLKD-LGLEDNQLGPFLTKNYAIFSEDLENLKTRVAYLQSKNFSKTDIARMVKNAPFLLSFSVERLDNRLGFFQKELELNVKKTRDLVVRLPRLLTGSLEPVKENMKVYHLELGFKHNEIQHMVIKIPKMLTANKRKLTEIFDYVHNVMNIPHHIIVKFPQLFNTRVFKIKERHLFLAYLGRAQYDPAKPNYVSLDKFVSFPDKIFCKEIAKASLNDFEKFLKTL 412
[Close]
BLAST of mTERF domain containing 1 vs. UniProt/SwissProt
Match: sp|Q6P6Q6|MTEF3_RAT (Transcription termination factor 3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mterf3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.458e-31
Identity = 78/292 (26.71%), Postives = 153/292 (52.40%), Query Frame = 3 
Query:  900 EIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            E + I++      P     +A  ++ + TL  L++ GVDL +IE + +  N+L RLN++  +  ++ F+K+    ED QL    +    IF ++L +++    YL+S+NF+ +D+  ++ +   +L+ +   L+ R    ++ ++L+ ++   LV++  R+L  ++  +K  +      +GF   E++++V   PK+L  +K  L+  F ++H  +N+ H  IV            + ER  +L +L + Q DP +P Y  +    S  +  FC++IA  S+  F KF+KTL
Sbjct:  119 EEEAIQIAAYSPLPLSSSTLADYVDHSETLQKLVQLGVDLSKIEKHPDVANLLLRLNFEKDIKQILLFLKD-LGLEDNQLGPFLTKNYAIFSEDLENLKTRVAYLQSKNFSKTDIACMVKNAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLLTGSLEPVKENMKVYRLELGFKHNEIQHMVTKIPKMLTANKRKLTETFDYVHNVMNIPHHIIVKFPQVFNTRVFKIKERHLFLAYLGKAQYDPAKPNYVSLDKFVSFPDEVFCKEIAKASVNDFEKFLKTL 409
[Close]
BLAST of mTERF domain containing 1 vs. UniProt/SwissProt
Match: sp|Q96E29|MTEF3_HUMAN (Transcription termination factor 3, mitochondrial OS=Homo sapiens OX=9606 GN=MTERF3 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 2.310e-30
Identity = 75/269 (27.88%), Postives = 143/269 (53.16%), Query Frame = 3 
Query:  969 IEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            ++ + TL  L+  GVDL +IE +    N+L RL+++  +  ++ F+K+    ED QL    +    IF ++L +++    YL S+NF+ +D+  ++     +LN +   L+ R    ++ ++L+ ++   LV++  R+L  ++  +K  +      +GF   E+++++   PK+L  +K  L+  F F+H  +++ H  IV            + ER  +L +L R Q DP +P Y  +  + S+ +  FCE+IA  S+  F KF+KTL
Sbjct:  150 VDHSETLQKLVLLGVDLSKIEKHPEAANLLLRLDFEKDIKQMLLFLKD-VGIEDNQLGAFLTKNHAIFSEDLENLKTRVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLLTGSLEPVKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNVMSIPHHIIVKFPQVFNTRLFKVKERHLFLTYLGRAQYDPAKPNYISLDKLVSIPDEIFCEEIAKASVQDFEKFLKTL 417
[Close]
BLAST of mTERF domain containing 1 vs. UniProt/SwissProt
Match: sp|Q5ZJC8|MTEF3_CHICK (Transcription termination factor 3, mitochondrial OS=Gallus gallus OX=9031 GN=MTERF3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 9.196e-30
Identity = 78/274 (28.47%), Postives = 136/274 (49.64%), Query Frame = 3 
Query:  969 IEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAI-----VISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            ++ + TL  L+  GVDL ++E  +    +L  L+++  +  ++ F+K+    ED QL    +  P I  + L  +E    YLKS+ F ++++T ++     +L  +   L+ R    +  + L+ ++   LVI+F R+L   +  +K  +       GF R EV+ I   +PK+L   K  L   F +LH  + + H  +     V +S  L      + ER  +LIFL R Q DP +P Y  +  + S+ +  FC +IA  S+  F KF+KT+
Sbjct:  138 VDHSETLTKLVHLGVDLSQVEKRQKAGQLLLTLDFEKDITKILLFLKD-VGIEDNQLGPFLTKNPYILGEELEALETRVAYLKSKKFGNAEITQMVSRAPYLLLFSVERLDNRLGFFKNELGLSVKKTKDLVIRFPRLLTGKLEPVKENLQVCQVEFGFERNEVQQIAFKTPKILTASKKRLRQTFDYLHNIMGIPHNMLTRFPQVFNSKLL-----RIKERHMFLIFLGRAQYDPTKPSYISLDQLVSLPDEVFCTEIAKASMQDFEKFLKTI 405
[Close]
BLAST of mTERF domain containing 1 vs. UniProt/SwissProt
Match: sp|Q9VPD5|MTEF3_DROME (Transcription termination factor 3, mitochondrial OS=Drosophila melanogaster OX=7227 GN=mTerf3 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.245e-28
Identity = 78/304 (25.66%), Postives = 148/304 (48.68%), Query Frame = 3 
Query:  861 ESNKQISIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKT 1772
            E +K+++++   RE          + P+   N+A  +  ++TL   L  GVDL+ IE  +   + + +L+++  V P I+F+ +Q    D     +F+  P +F+++L D++    YLKS+ F+      I+  N   L  +   +++R    ++   L+  ++  L  +    +  NM  ++ +V  L + MGF  +E+ ++V+  P++LM   DDL   F+++H+ + + H  IV     L      L ER ++L  L R Q DP + LY   + I       F   +A + +  F  F+KT
Sbjct:   62 EGSKEVALDFRNREA---------HVPS--FNLAAYVNNSSTLQQFLSLGVDLHSIERRKGLGDFVLKLDFEKNVKPYITFLVDQGVSPD-DFGRMFTKNPLLFKEDLDDLQTRVNYLKSKRFSDEARQRILTQNPYWLMFSTRRVDRRLGYFQKEFKLSGHDLRLLATREPNAITYNMEHLRKSVFTLKEEMGFNAKELSDLVVRKPRLLMIPPDDLVERFSYIHQDMGLPHAQIVQCPELLASREFRLRERHEFLKLLGRAQYDPQKDLYISPKTIVEGNNFYFVRNVAKSDLETFDLFLKT 353
[Close]
BLAST of mTERF domain containing 1 vs. TrEMBL
Match: A0A094ZZN1 (mTERF domain-containing protein 1, mitochondrial OS=Schistosoma haematobium OX=6185 GN=MS3_07038 PE=4 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 2.785e-38
Identity = 92/299 (30.77%), Postives = 160/299 (53.51%), Query Frame = 3 
Query:  879 SIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            SI+ L +   E+ELDE+ + P    N+A  I    TL  L+K GV+L ++E      NML +L++   + P++  + +   F+ +Q+A I +  PK+ +  L +I     Y   R  +S+D+ ++IC   +IL      ++K   +++ LI L   E+ K++    +I++  + +IK     L K MGF++  +  +++ SPK+L+  +  LS NF  +H  LN+  + I I   AL      L +R  +L+  K FQ DP +PLYTP+ +I    + EFC+K   T+   +  F++TL
Sbjct:  116 SIDILSQWFKELELDELVHVPLSSANLAAYIPSCFTLSQLVKLGVNLSKVEAVPGVANMLMKLDFHNDIEPILWRLSD-FGFQPKQIARIITAFPKLLKLPLCEISARLTYFTDRKVSSTDVVTMICRVPNILEKPPIEIDKNLGQIKSLIQLENSEIVKVITTEPKIIIHPLPKIKDVFVVLSKMMGFSQSVIHELILTSPKLLITERQHLSDNFKIMHWHLNLPVDLIQIWPEALSAAPHLLHQRCTFLVRRKLFQPDPTKPLYTPLSSIVLQDDDEFCQKYGFTTEEDYDNFLRTL 413
[Close]
BLAST of mTERF domain containing 1 vs. TrEMBL
Match: A0A183KUV6 (Uncharacterized protein OS=Schistosoma curassoni OX=6186 GN=SCUD_LOCUS18847 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.036e-38
Identity = 93/299 (31.10%), Postives = 160/299 (53.51%), Query Frame = 3 
Query:  879 SIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            SI+ L +   E+ELDE+ + P    N+A  I    TL  L+K GV+L ++E      NML +L++   + P++  + +   F+ +Q+A I +  PK+ +  L +I     Y   R  +S+D+ ++IC   +IL      ++K   +++ LI L   E+ KL+    +I++  + +IK     L K MGF++  +  +++ SPK+L+  +  LS NF  +H  LN+  + I I   AL      L +R  +L+  K FQ DP +PLYTP+ +I    + EFC+K   T+   +  F++TL
Sbjct:  152 SIDILSQWFKELELDELVHVPLSSANLAAYIPSCFTLSQLVKLGVNLSKVEAVPGVANMLMKLDFHNDIEPILWRLSD-FGFQPKQIARIITAFPKLLKLPLCEISARLTYFTDRKVSSTDVVTMICRIPNILEKPPIEIDKNLGQIKSLIQLENSEIVKLITTEPKIIIHPLPKIKDVFVVLSKMMGFSQSVIHELILTSPKLLITERQHLSDNFKIMHWHLNLPVDLIQIWPEALSAAPHLLHQRCTFLVRRKLFQPDPTKPLYTPLSSIVLQDDDEFCQKYGFTTEEDYDNFLRTL 449
[Close]
BLAST of mTERF domain containing 1 vs. TrEMBL
Match: A0A3Q0KT04 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.093e-37
Identity = 93/299 (31.10%), Postives = 159/299 (53.18%), Query Frame = 3 
Query:  879 SIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            SIE L +   E+EL E+ + P    N+A  I  + TL  L+K GV+L ++E      NML +L++   + P++  + +   F+ +Q+A I +  PKI +  L +I     Y   R  +S+D+ ++IC   +IL      ++K   +++ LI L   E+ +++    +I+   + +IK     L K MGF++  +  +V+ SPK+L+  ++ LS NF  +H  LN+  + I I   AL      L +R  +L+  K FQ DP +PLYTP+ +I    + EFC K   T+   +  F++TL
Sbjct:  152 SIEILSQWFKELELSELVHVPLSSANLAAYIPSSFTLSQLVKLGVNLSKVEAVPGVANMLVKLDFHNDIEPILWGLSD-FGFKPKQIARIITAFPKILKLPLCEISARLTYFTDRKVSSTDVVTMICRVPNILEKPPMEIDKNLGQIKSLIQLKNSEVVEVITTEPKIITHPLPKIKDIFVVLSKMMGFSQSAIHKLVLTSPKLLITEREHLSNNFKIMHWHLNLPVDLIQIWPEALSAAPHLLHQRCTFLVHRKLFQPDPTKPLYTPLSSIVLQDDDEFCRKYGFTTEEDYDNFLRTL 449
[Close]
BLAST of mTERF domain containing 1 vs. TrEMBL
Match: G4VRI8 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 GN=Smp_171940 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.206e-37
Identity = 93/299 (31.10%), Postives = 159/299 (53.18%), Query Frame = 3 
Query:  879 SIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            SIE L +   E+EL E+ + P    N+A  I  + TL  L+K GV+L ++E      NML +L++   + P++  + +   F+ +Q+A I +  PKI +  L +I     Y   R  +S+D+ ++IC   +IL      ++K   +++ LI L   E+ +++    +I+   + +IK     L K MGF++  +  +V+ SPK+L+  ++ LS NF  +H  LN+  + I I   AL      L +R  +L+  K FQ DP +PLYTP+ +I    + EFC K   T+   +  F++TL
Sbjct:  152 SIEILSQWFKELELSELVHVPLSSANLAAYIPSSFTLSQLVKLGVNLSKVEAVPGVANMLVKLDFHNDIEPILWGLSD-FGFKPKQIARIITAFPKILKLPLCEISARLTYFTDRKVSSTDVVTMICRVPNILEKPPMEIDKNLGQIKSLIQLKNSEVVEVITTEPKIITHPLPKIKDIFVVLSKMMGFSQSAIHKLVLTSPKLLITEREHLSNNFKIMHWHLNLPVDLIQIWPEALSAAPHLLHQRCTFLVHRKLFQPDPTKPLYTPLSSIVLQDDDEFCRKYGFTTEEDYDNFLRTL 449
[Close]
BLAST of mTERF domain containing 1 vs. TrEMBL
Match: A0A430QRS6 (mTERF domain-containing protein, mitochondrial OS=Schistosoma bovis OX=6184 GN=DC041_0012374 PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.598e-37
Identity = 92/299 (30.77%), Postives = 159/299 (53.18%), Query Frame = 3 
Query:  879 SIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            SI+ L +   E+ELDE+ + P    N+A  I    TL  L+K GV+L ++E      NML +L++   + P++  + +   F+  Q+A I +  PK+ +  L +I     Y   R  +S+D+ ++IC   +IL      ++K   +++ LI L   E+ K++    +I++  + +IK     L K MGF++  +  +++ SPK+L+  +  LS NF  +H  LN+  + I I   AL      L +R  +L+  K FQ DP +PLYTP+ +I    + EFC+K   T+   +  F++TL
Sbjct:  152 SIDILSQWFKELELDELVHVPLSSANLAAYIPSCFTLSQLVKLGVNLSKVEAVPGVANMLMKLDFHNDIEPILWRLSD-FGFQPTQIARIITAFPKLLKLPLCEISARLTYFTDRKVSSTDVVTMICRIPNILEKPPIEIDKNLGQIKSLIQLENSEIVKVITTEPKIIIHPLPKIKDVFVVLSKMMGFSQSVIHELILTSPKLLITERQHLSDNFKIMHWHLNLPVDLIQIWPEALSAAPHLLHQRCTFLVRRKLFQPDPTKPLYTPLSSIVLQDDDEFCQKYGFTTEEDYDNFLRTL 449
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Cavefish
Match: mterf3 (mitochondrial transcription termination factor 3 [Source:NCBI gene;Acc:103022240])

HSP 1 Score: 138.272 bits (347), Expect = 6.239e-35
Identity = 90/295 (30.51%), Postives = 148/295 (50.17%), Query Frame = 3 
Query:  900 EIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSAL---CLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            E D I++    N P     +   ++K+ TL NL++ GVDL ++E  RN  +ML RL++   V P + F+K+    ED  L  +F+  P I  ++L +++    YLKS+ F+S  + +++     +LN +   L+ R    +E I L+  +   +V +  R+L  ++  IK  +       GF   E+++IV   PKVL   K  L+  F F+H  + + H  IV     L   CL    + ER  +L FL R   DP  P Y  ++ + +V +  FC ++A  S   F +F KTL
Sbjct:  140 EEDAIQIIVPPNLPPASFTLRDYVDKSETLRNLVQLGVDLSKLEERRNVGSMLVRLDFQADVAPRLFFLKD-LGVEDSHLGPLFTKNPFILTESLENMQARVSYLKSKKFSSESVAAMVIKAPYLLNFSVKRLDNRLAFFQERIGLSAHKTRDVVTRLPRLLCGSLEPIKENLKVFELEFGFRMTEIQHIVTRVPKVLTASKKKLTHVFDFIHNTMGVPHSLIVKFPQVLNSNCL---RMKERHLFLEFLGRAHYDPAHPNYISLERLVTVPDDIFCTEVALASFEDFERFQKTL 430
[Close]
BLAST of mTERF domain containing 1 vs. Ensembl Medaka
Match: mterf3 (mitochondrial transcription termination factor 3 [Source:NCBI gene;Acc:101164906])

HSP 1 Score: 122.865 bits (307), Expect = 1.388e-29
Identity = 77/269 (28.62%), Postives = 141/269 (52.42%), Query Frame = 3 
Query:  969 IEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            +EK+ TL  L++ GV+L+++E   N  +ML RL++ T V P + F+KE    +D     I ++ P +  +N+ ++++   YLKSR F+S  + S++     +LN     L+ R    ++ + L+      LV +  ++L  ++  +K  +      +GF + E+++IV+  PKVL  +K  L+  F FLH  + + H  I      L      + ER  +L +L++ Q DP  P Y  +  + S+ +  FC ++A +++  F  F KTL
Sbjct:  158 VEKSETLSKLVELGVNLWKLEQRPNVGSMLLRLDFKTDVAPRLMFLKE-IGVKDSCFGYIITHNPFVLCENIENLQDRVTYLKSRKFSSETVASMVSRAPYLLNFNVKRLDNRLGFYQQQLQLSASNTRNLVARLPKLLCVSLEPVKENLKVCEIELGFKQNEIQHIVVAVPKVLTANKRKLTQIFDFLHNTMKVPHYLIAKFPQVLNTKYLRVRERHLFLEYLQKAQYDPTLPNYISLDRMVSLPDEAFCTELALSTVEDFYLFQKTL 425
[Close]
BLAST of mTERF domain containing 1 vs. Planmine SMEST
Match: SMESG000028457.1 (SMESG000028457.1)

HSP 1 Score: 1061.6 bits (2744), Expect = 0.000e+0
Identity = 565/585 (96.58%), Postives = 566/585 (96.75%), Query Frame = 3 
Query:   21 MITVMHKVFKIWRTNVIRYISSDSDKDFFLRXXXXXXXXXXXXXXXXXXXVNNENEYSNIHLNNAIEDVNFIEKNCDIDIKITETEKRLRKDKMLQIINSPIIDDQYNSNNNFHKYKTDLYSKRLTKESIICRSDNFPLKNDLIMQRQPETMDHKNSDYMTLKTDFTDKSKFNQINDLCDQFHTIDKKISSTIKPDTLINSSLHTEQNNTNDIQDNSIYGKGRKNARKCSLNXXXXXXXXXXXXTDRIINKAITQPHYETVEIFKNLNNKIDSEMKDEIKESNKQISIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            MITVMHKVFKIWRTNVIRYISSDSDKDFFLRLNKSHLNNSLKNNDKLLMSVNNENEYSNIHLNNAIEDVNFIEKNCDIDIKITETEKRLRKDKMLQIINSPIIDDQYNSNNNFHKYKTDLYSKRLTKESIICRSDNFPLKNDLIMQRQPETMDHKNSDYMTLKTDFTDK                +KKISSTIKPDTLINSSLHTEQNNTNDIQDNSIYGKGRKNARKCSLNIKSISKDSVIV TDRIINKAITQP YETVEIFKNLNNKIDSEMKDEIKESNKQISIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSI CSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL
Sbjct:    1 MITVMHKVFKIWRTNVIRYISSDSDKDFFLRLNKSHLNNSLKNNDKLLMSVNNENEYSNIHLNNAIEDVNFIEKNCDIDIKITETEKRLRKDKMLQIINSPIIDDQYNSNNNFHKYKTDLYSKRLTKESIICRSDNFPLKNDLIMQRQPETMDHKNSDYMTLKTDFTDK----------------NKKISSTIKPDTLINSSLHTEQNNTNDIQDNSIYGKGRKNARKCSLNIKSISKDSVIVYTDRIINKAITQPQYETVEIFKNLNNKIDSEMKDEIKESNKQISIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSITCSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 569
[Close]
BLAST of mTERF domain containing 1 vs. Planmine SMEST
Match: SMESG000028457.1 (SMESG000028457.1)

HSP 1 Score: 1052.35 bits (2720), Expect = 0.000e+0
Identity = 561/581 (96.56%), Postives = 562/581 (96.73%), Query Frame = 3 
Query:   33 MHKVFKIWRTNVIRYISSDSDKDFFLRXXXXXXXXXXXXXXXXXXXVNNENEYSNIHLNNAIEDVNFIEKNCDIDIKITETEKRLRKDKMLQIINSPIIDDQYNSNNNFHKYKTDLYSKRLTKESIICRSDNFPLKNDLIMQRQPETMDHKNSDYMTLKTDFTDKSKFNQINDLCDQFHTIDKKISSTIKPDTLINSSLHTEQNNTNDIQDNSIYGKGRKNARKCSLNXXXXXXXXXXXXTDRIINKAITQPHYETVEIFKNLNNKIDSEMKDEIKESNKQISIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            MHKVFKIWRTNVIRYISSDSDKDFFLRLNKSHLNNSLKNNDKLLMSVNNENEYSNIHLNNAIEDVNFIEKNCDIDIKITETEKRLRKDKMLQIINSPIIDDQYNSNNNFHKYKTDLYSKRLTKESIICRSDNFPLKNDLIMQRQPETMDHKNSDYMTLKTDFTDK                +KKISSTIKPDTLINSSLHTEQNNTNDIQDNSIYGKGRKNARKCSLNIKSISKDSVIV TDRIINKAITQP YETVEIFKNLNNKIDSEMKDEIKESNKQISIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSI CSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL
Sbjct:    1 MHKVFKIWRTNVIRYISSDSDKDFFLRLNKSHLNNSLKNNDKLLMSVNNENEYSNIHLNNAIEDVNFIEKNCDIDIKITETEKRLRKDKMLQIINSPIIDDQYNSNNNFHKYKTDLYSKRLTKESIICRSDNFPLKNDLIMQRQPETMDHKNSDYMTLKTDFTDK----------------NKKISSTIKPDTLINSSLHTEQNNTNDIQDNSIYGKGRKNARKCSLNIKSISKDSVIVYTDRIINKAITQPQYETVEIFKNLNNKIDSEMKDEIKESNKQISIESLKREIDEIELDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSITCSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 565
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BLAST of mTERF domain containing 1 vs. Planmine SMEST
Match: SMESG000028459.1 (SMESG000028459.1)

HSP 1 Score: 205.682 bits (522), Expect = 4.577e-59
Identity = 107/268 (39.93%), Postives = 171/268 (63.81%), Query Frame = 3 
Query:  972 EKNTTLLNLLKYGVDLYEIETNRNGVNMLARLNWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLKSRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVIKFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLSINFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHEPLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL 1775
            +K +TL  +LKYG++L + +T + G+ +L  ++W   + PLISFMK  A+F D+ LA IFS CP+I   + V I+++F YL SR    S+L ++     S+   +   +EKR +E+E+L  LT  EMN LV     IL++N+ ++K  ++ L K +G +  E++ I++ SPK+L+ +   L+ NF FL+R LN+S+E I  SS AL +P S L +RVKYLI L ++Q +  +P +  + +IA   + EF   IAHTSI++F+ F++TL
Sbjct:  180 DKVSTLELMLKYGMNLKQFQTKKEGLEILENIDWKADIEPLISFMKNLADFNDKHLAEIFSSCPRILVVSKVQIQKLFEYLISRKLQKSNLITLFHKKPSLFMCSDFDVEKRLEELEKLASLTKSEMNHLVYNCPGILMENIFKLKRNINNLKKELGLSEVELRKIIIASPKILLTNVSTLNQNFFFLNRTLNISYEDIANSSKALAMPKSKLMDRVKYLISLNKYQINSDQPPHVYLNSIAEGKDEEFINNIAHTSISEFKTFIETL 447
The following BLAST results are available for this feature:
BLAST of mTERF domain containing 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
MTERF32.442e-3227.88mitochondrial transcription termination factor 3 [... [more]
MTERF34.809e-3127.88mitochondrial transcription termination factor 3 [... [more]
MTERF38.220e-1925.87mitochondrial transcription termination factor 3 [... [more]
MTERF34.041e-822.37mitochondrial transcription termination factor 3 [... [more]
MTERF45.595e-626.34mitochondrial transcription termination factor 4 [... [more]
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BLAST of mTERF domain containing 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
C50F4.127.040e-1223.05pep chromosome:WBcel235:V:9537672:9539738:-1 gene:... [more]
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BLAST of mTERF domain containing 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mTerf32.239e-2925.66gene:FBgn0037008 transcript:FBtr0078215[more]
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BLAST of mTERF domain containing 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
mterf32.851e-3026.52mitochondrial transcription termination factor 3 [... [more]
mterf33.416e-1125.55mitochondrial transcription termination factor 3 [... [more]
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BLAST of mTERF domain containing 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
MTERF31.570e-2725.81mitochondrial transcription termination factor 3 [... [more]
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BLAST of mTERF domain containing 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Mterf39.837e-3327.05mitochondrial transcription termination factor 3 [... [more]
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BLAST of mTERF domain containing 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q8R3J4|MTEF3_MOUSE6.881e-3227.05Transcription termination factor 3, mitochondrial ... [more]
sp|Q6P6Q6|MTEF3_RAT9.458e-3126.71Transcription termination factor 3, mitochondrial ... [more]
sp|Q96E29|MTEF3_HUMAN2.310e-3027.88Transcription termination factor 3, mitochondrial ... [more]
sp|Q5ZJC8|MTEF3_CHICK9.196e-3028.47Transcription termination factor 3, mitochondrial ... [more]
sp|Q9VPD5|MTEF3_DROME2.245e-2825.66Transcription termination factor 3, mitochondrial ... [more]
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BLAST of mTERF domain containing 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A094ZZN12.785e-3830.77mTERF domain-containing protein 1, mitochondrial O... [more]
A0A183KUV63.036e-3831.10Uncharacterized protein OS=Schistosoma curassoni O... [more]
A0A3Q0KT041.093e-3731.10Uncharacterized protein OS=Schistosoma mansoni OX=... [more]
G4VRI81.206e-3731.10Uncharacterized protein OS=Schistosoma mansoni OX=... [more]
A0A430QRS63.598e-3730.77mTERF domain-containing protein, mitochondrial OS=... [more]
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BLAST of mTERF domain containing 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mterf36.239e-3530.51mitochondrial transcription termination factor 3 [... [more]
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BLAST of mTERF domain containing 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of mTERF domain containing 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of mTERF domain containing 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of mTERF domain containing 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mterf31.388e-2928.62mitochondrial transcription termination factor 3 [... [more]
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BLAST of mTERF domain containing 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000028457.10.000e+096.58SMESG000028457.1[more]
SMESG000028457.10.000e+096.56SMESG000028457.1[more]
SMESG000028459.14.577e-5939.93SMESG000028459.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30001383 ID=SMED30001383|Name=mTERF domain containing 1|organism=Schmidtea mediterranea sexual|type=transcript|length=2007bp
GTTTTATATAAAATTGAATGATGATTACAGTCATGCACAAAGTTTTCAAA
ATTTGGAGAACTAATGTCATTAGATATATTTCATCCGATTCAGACAAAGA
TTTCTTTCTTAGACTCAACAAATCTCATTTGAATAATTCCTTAAAAAATA
ACGACAAACTTTTAATGTCTGTAAATAACGAAAATGAATATTCCAATATA
CATTTAAATAATGCTATTGAGGATGTCAATTTTATTGAAAAAAATTGCGA
TATTGATATAAAGATTACTGAAACTGAAAAAAGATTAAGGAAAGATAAAA
TGTTGCAAATTATTAATTCCCCTATAATTGATGATCAGTATAATTCGAAT
AATAATTTCCACAAATATAAAACAGATTTATATTCTAAAAGATTGACTAA
AGAAAGTATTATATGTAGAAGTGATAATTTTCCGTTGAAAAATGATTTAA
TTATGCAACGACAACCAGAAACCATGGATCATAAAAATTCTGATTATATG
ACACTGAAAACTGATTTTACTGACAAAAGTAAATTCAATCAAATTAATGA
CTTATGTGATCAATTTCATACTATAGATAAGAAAATTTCTAGTACTATAA
AACCTGACACATTAATTAATTCATCTTTACATACGGAACAAAATAACACA
AATGATATTCAAGATAATTCAATTTATGGTAAAGGAAGAAAGAATGCCAG
AAAATGTTCTCTAAATATTAAAAGCATTTCAAAAGACAGTGTAATCGTTT
CTACTGACAGAATAATAAACAAAGCAATTACTCAACCTCATTATGAAACT
GTTGAAATATTCAAAAATCTTAATAATAAAATTGATTCAGAAATGAAAGA
CGAAATTAAAGAAAGCAATAAACAAATATCAATTGAAAGCTTGAAAAGGG
AAATCGACGAAATTGAATTGGATGAAGTGGAGAACACACCAACTAAGTTA
TTGAATATTGCACCTATAATAGAAAAAAATACGACCCTGCTAAATTTACT
GAAATATGGAGTTGATCTCTATGAAATAGAAACCAATAGAAATGGCGTTA
ATATGTTAGCGCGTCTCAATTGGGATACTCAAGTTCTACCATTGATATCG
TTCATGAAGGAACAAGCTAATTTTGAAGACAGACAACTAGCGATAATATT
TTCTTATTGCCCTAAAATTTTCAGGAAAAATCTAGTGGACATTGAGGAAA
TTTTTGTTTACTTAAAAAGTCGAAATTTTAACTCAAGTGATTTAACTTCA
ATAATCTGTTCCAATACATCTATTTTGAATTTGACTAAAACACTTTTAGA
AAAACGATTTCAAGAAGTCGAAGAACTGATAGATTTAACAACGGAAGAAA
TGAATAAATTGGTTATAAAGTTCTCACGAATTTTAGTCGATAATATGATG
CAAATCAAGCATGCCGTTCATCAGTTGCATAAAGCGATGGGATTTACTAG
AGAAGAAGTGAAAAATATTGTAATGGATTCTCCCAAAGTTTTAATGCAAC
ATAAAGATGATTTAAGTATAAATTTCACATTTCTGCATAGAGCTCTTAAT
ATGTCACATGAAGCAATTGTTATTTCATCTTCAGCACTTTGCTTACCTTC
ATCAACTCTCTCCGAAAGAGTTAAATATCTAATTTTTTTGAAAAGGTTTC
AAACGGATCCCCATGAACCACTCTACACCCCAATCCAAAACATTGCCAGT
GTAACCGAGGCTGAATTTTGTGAAAAGATTGCACACACTTCAATTACTAA
GTTTCGAAAGTTTGTTAAAACCTTGTAAAAATGATTTTGTAATAAATTGC
TATCAAAGACTTACTTTTAATTTATACAGAATGTATTTGTAAATCATATT
TTAATTTTTGATCCGAATAGCAATTGGCAAATGGAGACGTCCCGTAATTT
CATACGTCATCCTAAACCATAAACATTCATGTTGATGGGCTGTTCGGTTT
GTAAAGCTTACTAGCCCAGTCAAAGAAAATAACTGAAATTCCAAATTTGG
AGACACA
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protein sequence of SMED30001383-orf-1

>SMED30001383-orf-1 ID=SMED30001383-orf-1|Name=SMED30001383-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=587bp
MMITVMHKVFKIWRTNVIRYISSDSDKDFFLRLNKSHLNNSLKNNDKLLM
SVNNENEYSNIHLNNAIEDVNFIEKNCDIDIKITETEKRLRKDKMLQIIN
SPIIDDQYNSNNNFHKYKTDLYSKRLTKESIICRSDNFPLKNDLIMQRQP
ETMDHKNSDYMTLKTDFTDKSKFNQINDLCDQFHTIDKKISSTIKPDTLI
NSSLHTEQNNTNDIQDNSIYGKGRKNARKCSLNIKSISKDSVIVSTDRII
NKAITQPHYETVEIFKNLNNKIDSEMKDEIKESNKQISIESLKREIDEIE
LDEVENTPTKLLNIAPIIEKNTTLLNLLKYGVDLYEIETNRNGVNMLARL
NWDTQVLPLISFMKEQANFEDRQLAIIFSYCPKIFRKNLVDIEEIFVYLK
SRNFNSSDLTSIICSNTSILNLTKTLLEKRFQEVEELIDLTTEEMNKLVI
KFSRILVDNMMQIKHAVHQLHKAMGFTREEVKNIVMDSPKVLMQHKDDLS
INFTFLHRALNMSHEAIVISSSALCLPSSTLSERVKYLIFLKRFQTDPHE
PLYTPIQNIASVTEAEFCEKIAHTSITKFRKFVKTL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF
Vocabulary: molecular function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: biological process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 423..443
NoneNo IPR availableCOILSCoilCoilcoord: 281..301
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3DG3DSA:1.25.70.10coord: 316..585
e-value: 1.3E-55
score: 190.5
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 390..517
e-value: 3.1E-9
score: 36.2