U5 small nuclear ribonucleoprotein 40 kDa protein

Overview
NameU5 small nuclear ribonucleoprotein 40 kDa protein
Smed IDSMED30001238
Length (bp)1149
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of U5 small nuclear ribonucleoprotein 40 kDa protein (SMED30001238) t-SNE clustered cells

Violin plots show distribution of expression levels for U5 small nuclear ribonucleoprotein 40 kDa protein (SMED30001238) in cells (dots) of each of the 12 neoblast clusters.

 

back to top

 

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of U5 small nuclear ribonucleoprotein 40 kDa protein (SMED30001238) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for U5 small nuclear ribonucleoprotein 40 kDa protein (SMED30001238) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

back to top

 

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020



SMED30001238

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30001238SMESG000045329.1 SmedASXL_011340SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30001238SMESG000045329.1 SmedASXL_011340SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Human
Match: SNRNP40 (small nuclear ribonucleoprotein U5 subunit 40 [Source:HGNC Symbol;Acc:HGNC:30857])

HSP 1 Score: 374.785 bits (961), Expect = 1.633e-128
Identity = 168/308 (54.55%), Postives = 225/308 (73.05%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR S+L AP +LLSGH+GEV+C KF P GS LASAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV +WD+  GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K+  T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GS+NE AFHP EPI++S SSD +++MGEIQ
Sbjct:   50 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357

HSP 2 Score: 58.9214 bits (141), Expect = 4.961e-9
Identity = 48/260 (18.46%), Postives = 100/260 (38.46%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  +    N  + +L   ++    ++  G  D ++ VWD+   ++ Y + GH  SV   +       LLS + D  + + +++P 
Sbjct:   59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--------KKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 267
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Human
Match: SNRNP40 (small nuclear ribonucleoprotein U5 subunit 40 [Source:HGNC Symbol;Acc:HGNC:30857])

HSP 1 Score: 148.673 bits (374), Expect = 2.089e-43
Identity = 62/100 (62.00%), Postives = 79/100 (79.00%), Query Frame = 2 
Query:  818 TLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
             +RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GS+NE AFHP EPI++S SSD +++MGEIQ
Sbjct:   28 AVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 127
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Human
Match: WDR5 (WD repeat domain 5 [Source:HGNC Symbol;Acc:HGNC:12757])

HSP 1 Score: 152.91 bits (385), Expect = 1.773e-42
Identity = 111/329 (33.74%), Postives = 167/329 (50.76%), Query Frame = 2 
Query:  110 ALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITS-VAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDG-KRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            A   K+P T+    +     SA      P   N  A    L+GH   V   KF+P G +LAS+  D+ I +W  Y D K    +SGH   I D+ +SSDS+ + +AS DKT+ IWD   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V ++  G  I S   + +   WD    + ++T     +   S V  S +G ++L+ ++DNTL++WD   + +G +C K   GH +  EK  +   +SV G K +  GS D  VY+W++ T +I+ KL GH   V  TA HP E I+ S +
Sbjct:    2 ATEEKKPETEAARAQPTPSSSATQSKPTPVKPNY-ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD---YSKG-KCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320

HSP 2 Score: 82.8037 bits (203), Expect = 5.270e-17
Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            +V  V +SP G+++ S   + +I  W   + K  +T +GH   I+ VA S+D N L+S S D TL++WD    V   +C K + GH  N+   +  C ++     +  GS D++V +WD+ TG+ +  LP H   V+   F+    +++S S D
Sbjct:   47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192

HSP 3 Score: 60.8474 bits (146), Expect = 9.813e-10
Identity = 36/128 (28.12%), Postives = 65/128 (50.78%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGHT +++SV  S +G +L S+S D  +++W         +  K + GH    +  +   AWS D   +   S DK + +WD+ +G+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Human
Match: WDR5B (WD repeat domain 5B [Source:HGNC Symbol;Acc:HGNC:17826])

HSP 1 Score: 152.525 bits (384), Expect = 1.990e-42
Identity = 108/309 (34.95%), Postives = 162/309 (52.43%), Query Frame = 2 
Query:  170 SAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTD-SITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVD-GKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            SA     +P   N  A    L GH   V   KF+P G +LAS+  DR II+W  Y D K    L GHN  I D+ +SSDS  + +AS DKT+ +WD R G+ +K  KGH++ V   +  +    L  SGS D  +++W+ +      T+ A HS  V  V ++  G  I SG  + +   WD    + ++T     +  ++ V  S +G ++L+ ++DNTL++WD   + RG RC K   GH +  EK  +   +SV  GK +  GS D  VY+W++ T +I+ KL GH   V   A HP E ++ S +
Sbjct:   18 SANQSKEVPENPNY-ALKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAY-DGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCN-FNPPSNLIISGSFDETVKIWEVKTGKCLKTLSA-HSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWD---YSRG-RCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAA 316

HSP 2 Score: 72.0182 bits (175), Expect = 2.274e-13
Identity = 47/155 (30.32%), Postives = 80/155 (51.61%), Query Frame = 2 
Query:  626 HSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
             +V  V +SP G+++ S   + +I  W   + K  +T  GH   I+ VA S+D + L+S S D TL++WD    VR  +C K + GH  N+   +  C ++     +  GS D+ V +W++ TG+ +  L  H   V+   F+    +++S S D
Sbjct:   42 EAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWD----VRSGKCLKTLKGH-SNY---VFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYD 188

HSP 3 Score: 62.7734 bits (151), Expect = 2.814e-10
Identity = 39/128 (30.47%), Postives = 66/128 (51.56%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T  GHT++++SV  S +G +L S+S D  + +W         +  K + GH  N E  +   AWS D  R+   S DK + +WD+ +G+ +  L GH   V    F+P   +++S S D  + + E++
Sbjct:   36 TLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWG----AYDGKYEKTLYGH--NLE--ISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVK 155
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Human
Match: WDR83 (WD repeat domain 83 [Source:HGNC Symbol;Acc:HGNC:32672])

HSP 1 Score: 124.02 bits (310), Expect = 7.731e-32
Identity = 93/303 (30.69%), Postives = 140/303 (46.20%), Query Frame = 2 
Query:  194 PRTSNLLAPNL-LLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTY-GDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVK--NTTHTID-AKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHL--HNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSV 1081
            PR   L    L  L   +G V   +F  +G++  + G D+ + LWN   G +  L   SGH   +LD   S D+  + +   DK V++WD   G+ V+KF+GH   VN+V   +    +  SGS D  IR WD R +      T+D A+  V  V  S     I +G ++  + ++D+R  ++   + G    IT    S DG   L +S+D+TLR+ D          T  ++G    H  ++  L C  S     V   S D  V+ WD+  G +   LP   G V   A+HP EP LL+ 
Sbjct:    8 PRPPELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--LRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQ-FNEEATVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSVKVSDH--EILAGSVDGRVRRYDLRMGQLFSDYVGS--PITCTCFSRDGQCTLVSSLDSTLRLLDKD--------TGELLGEYKGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYHPTEPCLLTA 295

HSP 2 Score: 65.855 bits (159), Expect = 2.411e-11
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 
Query:  719 MKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
             K ++T      ++ +V  + DGN+ L+   D TL++W+    +RG   T L     H +E  +L  A S D   +  G  DK V +WD+ +GQ++ K  GH G VN   F+    ++LS S D+ I
Sbjct:   15 QKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNP---LRG---TLLRTYSGHGYE--VLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSI 133
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Celegans
Match: snrp-40.1 (Small Nuclear RibonucleoProtein homolog [Source:UniProtKB/TrEMBL;Acc:Q19211])

HSP 1 Score: 307.76 bits (787), Expect = 5.595e-103
Identity = 140/326 (42.94%), Postives = 215/326 (65.95%), Query Frame = 2 
Query:  140 VVVTERREFYSAG-DISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEI 1114
            +V +  ++  S+G    +  R SNL+AP ++L GH+GE++ G F+P+G+ LA++G+D++I  WN YG+ ++ + + GH+GA++DL+F++DS  + +  TDK+V +WD   G   ++F+ HT  VN+V        L  S SDD   R+ D R K    T   ++    V ++   D + SGGI+NV+  WD+R  +I  T  GH D+IT +++S  G F++SNS+D T+R WD RPFV G+R   +  GH HNFEKNLL+C+WS   + +T GS+D+ +YVW+  + +I+YKLPGH+GSVN T FHP EPI+LS  SD ++F+GEI
Sbjct:    3 LVTSSGQQLVSSGFPQQTAQRFSNLMAPTMVLLGHEGEIYTGAFSPDGTCLATSGYDQKIFFWNVYGECENFSTIKGHSGAVMDLKFTTDSSSLVSCGTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRRGVTLVASASDDGTCRVHDMRTKEPVKTYTNRYQQTAVTFNDSSDQVISGGIDNVLKVWDMRRDEITYTLTGHRDTITGISLSPSGKFIISNSMDCTVRQWDIRPFVPGQRSVGVFAGHNHNFEKNLLKCSWSPCERFITAGSSDRFLYVWETLSKKIVYKLPGHMGSVNCTDFHPKEPIMLSCGSDKRVFLGEI 328

HSP 2 Score: 57.3806 bits (137), Expect = 5.995e-9
Identity = 61/259 (23.55%), Postives = 95/259 (36.68%), Query Frame = 2 
Query:  356 VLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTR-VGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHN-FEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            VL GH G I    FS D   + T+  D+ +  W+     E     KGH+                                           +V+D+ ++     + S G +  +  WD+      + F  HTD + +V  S  G   + S S D T RV D R        TK  V    N +++  +    S D  +V  G  D  + VWDM   +I Y L GH  ++   +  P    ++S S D  +   +I+P 
Sbjct:   33 VLLGHEGEIYTGAFSPDGTCLATSGYDQKIFFWNVYGECENFSTIKGHSG------------------------------------------AVMDLKFTTDSSSLVSCGTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRRGVTLVASASDDGTCRVHDMR--------TKEPVKTYTNRYQQTAVTFNDSSD--QVISGGIDNVLKVWDMRRDEITYTLTGHRDTITGISLSPSGKFIISNSMDCTVRQWDIRPF 239
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Celegans
Match: snrp-40.2 (Small Nuclear RibonucleoProtein homolog [Source:UniProtKB/TrEMBL;Acc:O02097])

HSP 1 Score: 303.908 bits (777), Expect = 1.975e-101
Identity = 147/326 (45.09%), Postives = 208/326 (63.80%), Query Frame = 2 
Query:  140 VVVTERREFYSAGDISSIP-RTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEI 1114
            +V+  R +   A     +P RTS+L+AP ++L GH GE++  +F+ +GSFLASAG+D++I LWN +G+ ++ AVL GH GAI++++F++DS  + +A TDKTV +WD   G  ++ FK HT IVNSV       ++ CS SDD  + + D R K        K+    V ++   D +  GGI+N I  WD+    +    +GH D+ITS++VS++GNFLLSNS+D +L  WD RPFV  +R      G  HNFEKNLL+C WS     +T GSAD+ VYVW+  +   +YKLPGH+GSVN TA HP + ILLS  SD  IF+GE+
Sbjct:    3 MVIPARNQM--ASQFLELPKRTSSLMAPTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSDKTIFLGEL 326

HSP 2 Score: 72.7886 bits (177), Expect = 4.476e-14
Identity = 62/258 (24.03%), Postives = 100/258 (38.76%), Query Frame = 2 
Query:  356 VLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDT-RVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            VL GH G I   QFSSD  ++ +A  D+ + +W+     E     KGH                                          K ++++V ++    ++ S G +  +  WD+     I+ F  HTD + SV V+  G   + S S D T+ V D R     E   K +      +++  +    + D   V CG  D  + VWDM    + Y L GH  ++   +   +   LLS S D  +   +I+P 
Sbjct:   31 VLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGH------------------------------------------KGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRS---KEAAKKFIC----KYQQTAVTFNDAADN--VICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPF 237
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Celegans
Match: wdr-5.2 (WD repeat-containing protein wdr-5.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93847])

HSP 1 Score: 125.176 bits (313), Expect = 4.197e-32
Identity = 101/338 (29.88%), Postives = 158/338 (46.75%), Query Frame = 2 
Query:   92 PIEYSHALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLS----GHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDA-KHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHT-DSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSV-DGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            P + S  ++S  P           + SA      P  +NL     L++     HK  +   KF+P+G ++ S   D  I +W    D      L GH   I +  +SSDS  I + S DK V ++D   G  VK  KGHT+ V      + +  L  SGS D  IR+W  R  NT  +I   +  V  V ++  G Y+ SG  + ++  WD      ++T        IT V  S +G ++L+++++NTL++WD +      R  K   GH ++  K  +   +SV  GK +  GS D  VY+W++ T +I+  L GH  +V  T  HP + I+ S +
Sbjct:   61 PAQASTPMLSSTPGP--------SYSSAPTPMPNPSAANLWPTYKLVAEIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRM--DFVYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYV-FCCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQKL----RVLKEYTGHENS--KYCVAANFSVTGGKWIVSGSEDHKVYIWNLQTREILQTLDGHNTAVMCTDCHPGQNIIASAA 381
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Celegans
Match: wdr-5.1 (WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963])

HSP 1 Score: 120.168 bits (300), Expect = 1.961e-30
Identity = 90/298 (30.20%), Postives = 152/298 (51.01%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAG-HTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDG-KRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLS--VSSDTKIFM 1105
            L GH   +   KF+P G +L ++  D+ + +WN    I +   L+GH   + D+ +SSDS  + +AS DKT+ I++       K  KGH + V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V+++  G  I SG  + ++  WD    + I+T        +  V  S +G ++L++++D+TL++WD   F +G +  K   GH ++  K  +   +SV G K +  GS D  +Y+W++ T +I+  L GH   V  +  HP + I+ S  +  D KI +
Sbjct:   83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE-RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCN-FNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPA-HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD---FSKG-KTLKQYTGHENS--KYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHI 371

HSP 2 Score: 62.3882 bits (150), Expect = 1.750e-10
Identity = 43/165 (26.06%), Postives = 79/165 (47.88%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSA---VSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDA-KHSVLDVAYSPFGDYIFSGGIE--NVINQW 706
            L  H   V    F  +GS +AS  +D  + +W+T        ++   N  +  ++FS +  +I  ++ D T+ +WD   G+ +K++ GH +    + A   V+  + +  SGS+DCKI +W+ + +     ++     VL     P  + I SG +E  N I+ W
Sbjct:  209 LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWII-SGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Celegans
Match: wdr-5.1 (WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963])

HSP 1 Score: 120.168 bits (300), Expect = 1.961e-30
Identity = 90/298 (30.20%), Postives = 152/298 (51.01%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAG-HTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDG-KRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLS--VSSDTKIFM 1105
            L GH   +   KF+P G +L ++  D+ + +WN    I +   L+GH   + D+ +SSDS  + +AS DKT+ I++       K  KGH + V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V+++  G  I SG  + ++  WD    + I+T        +  V  S +G ++L++++D+TL++WD   F +G +  K   GH ++  K  +   +SV G K +  GS D  +Y+W++ T +I+  L GH   V  +  HP + I+ S  +  D KI +
Sbjct:   83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE-RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCN-FNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPA-HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD---FSKG-KTLKQYTGHENS--KYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHI 371

HSP 2 Score: 62.3882 bits (150), Expect = 1.750e-10
Identity = 43/165 (26.06%), Postives = 79/165 (47.88%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSA---VSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDA-KHSVLDVAYSPFGDYIFSGGIE--NVINQW 706
            L  H   V    F  +GS +AS  +D  + +W+T        ++   N  +  ++FS +  +I  ++ D T+ +WD   G+ +K++ GH +    + A   V+  + +  SGS+DCKI +W+ + +     ++     VL     P  + I SG +E  N I+ W
Sbjct:  209 LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWII-SGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Fly
Match: CG3436 (gene:FBgn0031229 transcript:FBtr0078119)

HSP 1 Score: 348.977 bits (894), Expect = 7.245e-119
Identity = 162/345 (46.96%), Postives = 232/345 (67.25%), Query Frame = 2 
Query:   83 TKRPIEYS-HALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEI 1114
            TKRP      A  +KR + D++    R+   A   S + RTSNL AP + L GH+GE+F  +F PEG  L S+G DR+I +W  Y D +++  +SGH+GA+++  F+ D   I+T STDKT+  WD   G+R ++FKGH + VNSV      ++L CSGSDD  I++WD R K+  HT+++   V  V +   G+ + SGGI+N +  WDIR+  ++    GH+D+IT +++S +G+F+L+N++DNTLRVWD RP+  GERC K+  GH HNFEKNLLRCAWS    ++T GSAD++VY+WD+ T +I+YKLPGH GSVN   F P EP++LS SSD  +++GEI
Sbjct:    3 TKRPNNSVILAQEAKRSKNDLMAYTNRD--KALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345

HSP 2 Score: 69.707 bits (169), Expect = 6.049e-13
Identity = 53/256 (20.70%), Postives = 98/256 (38.28%), Query Frame = 2 
Query:  359 LSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLL-SNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQP 1120
            L GH G I   +F  + + + ++  D+ + IW      E V    GH+                                           +V++  ++P G +IF+   +  +  WDI   +  + F GH + + SV  S  G  LL S S D T+++WD R         K    H       +    +   G++V  G  D  V +WD+    +++ L GH  ++   +  P    +L+ + D  + + +++P
Sbjct:   51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSG------------------------------------------AVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDAR---------KKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRP 255
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Fly
Match: CG3436 (gene:FBgn0031229 transcript:FBtr0340650)

HSP 1 Score: 348.977 bits (894), Expect = 7.245e-119
Identity = 162/345 (46.96%), Postives = 232/345 (67.25%), Query Frame = 2 
Query:   83 TKRPIEYS-HALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEI 1114
            TKRP      A  +KR + D++    R+   A   S + RTSNL AP + L GH+GE+F  +F PEG  L S+G DR+I +W  Y D +++  +SGH+GA+++  F+ D   I+T STDKT+  WD   G+R ++FKGH + VNSV      ++L CSGSDD  I++WD R K+  HT+++   V  V +   G+ + SGGI+N +  WDIR+  ++    GH+D+IT +++S +G+F+L+N++DNTLRVWD RP+  GERC K+  GH HNFEKNLLRCAWS    ++T GSAD++VY+WD+ T +I+YKLPGH GSVN   F P EP++LS SSD  +++GEI
Sbjct:    3 TKRPNNSVILAQEAKRSKNDLMAYTNRD--KALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345

HSP 2 Score: 69.707 bits (169), Expect = 6.049e-13
Identity = 53/256 (20.70%), Postives = 98/256 (38.28%), Query Frame = 2 
Query:  359 LSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLL-SNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQP 1120
            L GH G I   +F  + + + ++  D+ + IW      E V    GH+                                           +V++  ++P G +IF+   +  +  WDI   +  + F GH + + SV  S  G  LL S S D T+++WD R         K    H       +    +   G++V  G  D  V +WD+    +++ L GH  ++   +  P    +L+ + D  + + +++P
Sbjct:   51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSG------------------------------------------AVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDAR---------KKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRP 255
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Fly
Match: wds (gene:FBgn0040066 transcript:FBtr0308566)

HSP 1 Score: 142.124 bits (357), Expect = 1.310e-38
Identity = 98/289 (33.91%), Postives = 154/289 (53.29%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITS-VAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSV-DGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            L+GH   V   KF+P G +LAS+  D+ I +W  Y D K    +SGH   I D+ +SSDS  + + S DKT+ +W+   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD R      T+ A HS  V  V ++  G  I S   + +   WD    + ++T     +   S V  S +G ++L+ ++DNTL++WD   + +G +C K   GH +  EK  +   +SV  GK +  GS D  VY+W++ + +++ KL GH  +V  TA HP E I+ S +
Sbjct:   68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD---YSKG-KCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAA 347

HSP 2 Score: 84.3445 bits (207), Expect = 9.405e-18
Identity = 53/209 (25.36%), Postives = 97/209 (46.41%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWD----KRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDN--TLRVWDT 838
            L GH   VFC  F P+ + + S   D  + +W+     K L  L  H+  +  + F+ D   I ++S D    IWDT  G+ +K      +   S    S   +   + + D  ++LWD    K +K  T   + K+ +        G +I SG  +N++  W+++  +++Q   GHTD++   A     N + S +++N  T+++W +
Sbjct:  152 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359

HSP 3 Score: 72.4034 bits (176), Expect = 9.292e-14
Identity = 45/154 (29.22%), Postives = 78/154 (50.65%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            +V  V +SP G+++ S   + +I  W   + K  +T +GH   I+ VA S+D   L+S S D TL+VW+    +   +  K + GH       +  C ++     +  GS D++V +WD+ TG+ +  LP H   V+   F+    +++S S D
Sbjct:   74 AVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWE----LSTGKSLKTLKGH----SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 219

HSP 4 Score: 62.3882 bits (150), Expect = 1.796e-10
Identity = 37/128 (28.91%), Postives = 67/128 (52.34%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGHT ++++V  S +G +L S+S D  +++W         +  K + GH    +  +   AWS D + +  GS DK + VW++ TG+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Fly
Match: wds (gene:FBgn0040066 transcript:FBtr0070438)

HSP 1 Score: 142.124 bits (357), Expect = 1.310e-38
Identity = 98/289 (33.91%), Postives = 154/289 (53.29%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITS-VAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSV-DGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            L+GH   V   KF+P G +LAS+  D+ I +W  Y D K    +SGH   I D+ +SSDS  + + S DKT+ +W+   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD R      T+ A HS  V  V ++  G  I S   + +   WD    + ++T     +   S V  S +G ++L+ ++DNTL++WD   + +G +C K   GH +  EK  +   +SV  GK +  GS D  VY+W++ + +++ KL GH  +V  TA HP E I+ S +
Sbjct:   68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD---YSKG-KCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAA 347

HSP 2 Score: 84.3445 bits (207), Expect = 9.405e-18
Identity = 53/209 (25.36%), Postives = 97/209 (46.41%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWD----KRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDN--TLRVWDT 838
            L GH   VFC  F P+ + + S   D  + +W+     K L  L  H+  +  + F+ D   I ++S D    IWDT  G+ +K      +   S    S   +   + + D  ++LWD    K +K  T   + K+ +        G +I SG  +N++  W+++  +++Q   GHTD++   A     N + S +++N  T+++W +
Sbjct:  152 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359

HSP 3 Score: 72.4034 bits (176), Expect = 9.292e-14
Identity = 45/154 (29.22%), Postives = 78/154 (50.65%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            +V  V +SP G+++ S   + +I  W   + K  +T +GH   I+ VA S+D   L+S S D TL+VW+    +   +  K + GH       +  C ++     +  GS D++V +WD+ TG+ +  LP H   V+   F+    +++S S D
Sbjct:   74 AVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWE----LSTGKSLKTLKGH----SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 219

HSP 4 Score: 62.3882 bits (150), Expect = 1.796e-10
Identity = 37/128 (28.91%), Postives = 67/128 (52.34%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGHT ++++V  S +G +L S+S D  +++W         +  K + GH    +  +   AWS D + +  GS DK + VW++ TG+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Fly
Match: Lis-1 (gene:FBgn0015754 transcript:FBtr0087241)

HSP 1 Score: 110.923 bits (276), Expect = 9.534e-27
Identity = 82/267 (30.71%), Postives = 118/267 (44.19%), Query Frame = 2 
Query:  359 LSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVK----NTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFE---------KNLLRCAWSVDGKR-------VTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
            L+GH  +I  + F      + +AS D T+ IWD   GE  +  KGHT  V  V A     +L  S S D  I+LWD +       T H  D  H+V  VA+ P GDY+ S   +  I  W++     ++T+ GH + +  V V  +G+   + S D T+RVW        + C   +  H H  E          + +  A   D K+       +  GS DK + +WD+  G  +  L GH   V   AFHP    L+S S D  I
Sbjct:  104 LTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDV-AFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHD--HNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW----LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTI 363

HSP 2 Score: 95.9005 bits (237), Expect = 1.501e-21
Identity = 78/277 (28.16%), Postives = 124/277 (44.77%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTI-DAKHSVLDVAYSPF--------------------GDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKR----VTCGSADKNVYVWD 985
            L GH   V    F  +G  LAS   D  I LW+     + +  + GH+  +  + F    D++ +AS D+T+ +W+   G  VK + GH   V  V  V     +F + S+D  IR+W    K+    + D +H+V  +A++P                     G ++ SG  +  I  WD+     + T +GH + +  +A    G +L+S S D T+RVWD    +R +RC K +  H H        C  S+D  +    V  GS D+ V VW+
Sbjct:  146 LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR-VHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWD----LRNKRCMKTLYAHQHF-------CT-SIDFHKAHPYVISGSVDQTVKVWE 409

HSP 3 Score: 78.1814 bits (191), Expect = 1.667e-15
Identity = 55/224 (24.55%), Postives = 91/224 (40.62%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVS-------------------HTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS-VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTR 841
            + GH   V    F P G ++ SA  DR I +W        +   +GH   +  ++   +     T S D+T+ +W T   +   + + H   V  ++                      H      SGS D  IR+WD  V     T+    + V  +A+ P G Y+ S   +  I  WD+R  + ++T   H    TS+       +++S SVD T++VW+ R
Sbjct:  189 MHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYC-VKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411

HSP 4 Score: 49.2914 bits (116), Expect = 3.760e-6
Identity = 39/128 (30.47%), Postives = 60/128 (46.88%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTG-QIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEI 1114
            +  GH  SIT V        ++S S D T+R+WD   F  GE   + + GH  + +      A+   GK +   SAD ++ +WD     + +  + GH  +V+  AF P    +LS S D  I M E+
Sbjct:  103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWD---FETGEY-ERSLKGHTDSVQD----VAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Zebrafish
Match: snrnp40 (small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978])

HSP 1 Score: 387.111 bits (993), Expect = 1.125e-133
Identity = 176/332 (53.01%), Postives = 242/332 (72.89%), Query Frame = 2 
Query:  122 KRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            KRPRT++V   + +  SA      PR+S+L AP +LLSGH+GEV+C KF P G+ LAS+G+DR I++WN YGD ++ A L GH+GA+++L +++D   +++ASTDKTV +WD+  GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K + HT    + VL V ++   D I SGGI+N I  WD+R+ K+I +  GH DS+T +++S DG++LLSNS+DN++RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VY+WD  T +I+YKLPGH GSVNE AFHP EPI+LS SSD ++++GEIQ
Sbjct:   19 KRPRTELVAAAQSQQLSA---MGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEIQ 347
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Zebrafish
Match: wdr5 (WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082])

HSP 1 Score: 149.828 bits (377), Expect = 1.677e-41
Identity = 112/329 (34.04%), Postives = 168/329 (51.06%), Query Frame = 2 
Query:  110 ALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITS-VAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDG-KRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            A   K+P T+   T+     SA    S P   N       L+GH   V   KF+P G +LAS+  D+ I +W  Y D K    +SGH   I D+ +SSDS+ + +AS DKT+ IWD   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V ++  G  I S   + +   WD    + ++T     +   S V  S +G ++L+ ++DNTL++WD   + +G +C K   GH +  EK  +   +SV G K +  GS D  VY+W++ T +I+ KL GH   V  TA HP E I+ S +
Sbjct:    2 ATEEKKPDTEATKTQPASAASASQSKSAPVKPNYTL-KFTLAGHTKAVSSVKFSPSGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD---YSKG-KCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320

HSP 2 Score: 83.9593 bits (206), Expect = 1.134e-17
Identity = 55/209 (26.32%), Postives = 97/209 (46.41%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWD----KRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDN--TLRVWDT 838
            L GH   VFC  F P+ + + S   D  + +W+     K L  L  H+  +  + F+ D   I ++S D    IWDT  G+ +K      +   S    S   +   + + D  ++LWD    K +K  T   + K+ +        G +I SG  +N++  W+++  +I+Q   GHTD + S A     N + S +++N  T+++W +
Sbjct:  125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332

HSP 3 Score: 82.8037 bits (203), Expect = 3.167e-17
Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            +V  V +SP G+++ S   + +I  W   + K  +T +GH   I+ VA S+D N L+S S D TL++WD    V   +C K + GH  N+   +  C ++     +  GS D++V +WD+ TG+ +  LP H   V+   F+    +++S S D
Sbjct:   47 AVSSVKFSPSGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192

HSP 4 Score: 60.4622 bits (145), Expect = 1.076e-9
Identity = 36/128 (28.12%), Postives = 64/128 (50.00%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGHT +++SV  S  G +L S+S D  +++W         +  K + GH    +  +   AWS D   +   S DK + +WD+ +G+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   40 TLAGHTKAVSSVKFSPSGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Zebrafish
Match: wdr83 (WD repeat domain containing 83 [Source:NCBI gene;Acc:436702])

HSP 1 Score: 117.857 bits (294), Expect = 8.301e-30
Identity = 86/302 (28.48%), Postives = 142/302 (47.02%), Query Frame = 2 
Query:  194 PRTSNLLAPNLL---LSGHKGEVFCGKFAPEGSFLASAGHDREIILWN-TYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDY-IFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHL--HNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLS 1078
            PR      P  L   +   +G V   +F  +G++L + G D+ + LW+ + G +  L   +GH   +LD   S D+  + + S+DKTV++WD   G+  +K +GH   VN V   +    +  SGS D  +R WD R +          S   ++     ++ + +G ++  + ++D+R  ++   + G    IT V  S DG   LS+S+D+T+R+ D        + T  M+G    H  +   L C  +     V   S D +VY WD+  G +  KLP     V   +FHP EP LL+
Sbjct:    6 PRPQAPQLPQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTL--LKTYTGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQ-FNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKVSEHELLTGSVDGRVRRYDLRMGQLQVDYIG--SPITCVCFSRDGQCTLSSSLDSTVRLLD--------KSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLT 294

HSP 2 Score: 60.077 bits (144), Expect = 1.154e-9
Identity = 38/123 (30.89%), Postives = 61/123 (49.59%), Query Frame = 2 
Query:  731 QTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
            +T      ++ +V  + DGN+LL+   D +L++W         R T L     H +E  +L    S D  ++   S+DK V +WD+ +GQ+  KL GH G VN   F+    ++LS S D  +
Sbjct:   19 RTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSV------SRGTLLKTYTGHGYE--VLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTV 133
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Zebrafish
Match: wdr83 (WD repeat domain containing 83 [Source:NCBI gene;Acc:436702])

HSP 1 Score: 117.857 bits (294), Expect = 8.386e-30
Identity = 86/302 (28.48%), Postives = 142/302 (47.02%), Query Frame = 2 
Query:  194 PRTSNLLAPNLL---LSGHKGEVFCGKFAPEGSFLASAGHDREIILWN-TYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDY-IFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHL--HNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLS 1078
            PR      P  L   +   +G V   +F  +G++L + G D+ + LW+ + G +  L   +GH   +LD   S D+  + + S+DKTV++WD   G+  +K +GH   VN V   +    +  SGS D  +R WD R +          S   ++     ++ + +G ++  + ++D+R  ++   + G    IT V  S DG   LS+S+D+T+R+ D        + T  M+G    H  +   L C  +     V   S D +VY WD+  G +  KLP     V   +FHP EP LL+
Sbjct:    6 PRPQAPQLPQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTL--LKTYTGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQ-FNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKVSEHELLTGSVDGRVRRYDLRMGQLQVDYIG--SPITCVCFSRDGQCTLSSSLDSTVRLLD--------KSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLT 294

HSP 2 Score: 60.077 bits (144), Expect = 1.186e-9
Identity = 38/123 (30.89%), Postives = 61/123 (49.59%), Query Frame = 2 
Query:  731 QTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
            +T      ++ +V  + DGN+LL+   D +L++W         R T L     H +E  +L    S D  ++   S+DK V +WD+ +GQ+  KL GH G VN   F+    ++LS S D  +
Sbjct:   19 RTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSV------SRGTLLKTYTGHGYE--VLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTV 133
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Zebrafish
Match: poc1b (POC1 centriolar protein B [Source:NCBI gene;Acc:386932])

HSP 1 Score: 114.39 bits (285), Expect = 1.496e-27
Identity = 77/296 (26.01%), Postives = 135/296 (45.61%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGH--LHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFM 1105
              GHK  + C  F P    LA+   D+ +++WN     +    + GH   I  + F+     + ++S D+TV +W   +      FK HT+ V SV   S   +   + SDD  +++W    K   ++++ +H+  V    +SP G  I S G +  +  WD    + I  F  +  S T V  ++ G  + S+  DNT+++WD R        T  ++ H  +HN   N    ++   G  +  GS+D  + + D+  G+++Y L GH G V    F     +  S  +D+++ M
Sbjct:   14 FKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFV-GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVH-FSRDGQRLVTASDDKSVKVWGVERKKFLYSLN-RHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR--------TNKLIQHYKVHNAGVNCF--SFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLM 296

HSP 2 Score: 106.301 bits (264), Expect = 9.788e-25
Identity = 80/291 (27.49%), Postives = 123/291 (42.27%), Query Frame = 2 
Query:  236 GHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTI-DAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYK-------------LPGHVGSVNETAFHPHEP 1066
            GH   +    FAP GS +AS+  D+ + LW T     +  V   H  ++  + FS D   + TAS DK+V +W     + +     HT+ V   +  S    L  S  DD  +RLWD       +   D   S   V ++  G  I S G +N I  WDIR  K+IQ +  H   +   +    GN+L+S S D+T+++ D    + G      ++  LH  +  +L   +S DG     G AD  V +W      + Y+              P H+  +   + H H P
Sbjct:   58 GHTDVITGVNFAPSGSLVASSSRDQTVRLW-TPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVR-CARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILD---LLEGR-----LIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKRVTPDPPPHLMDIYPRSHHRHHP 338

HSP 3 Score: 80.8777 bits (198), Expect = 3.717e-16
Identity = 61/254 (24.02%), Postives = 102/254 (40.16%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMY 991
            L+ H   V C +F+P+G  +AS G DR + LW+T    + + + + + G+   + F+S    I ++  D T+ IWD R  + ++ +K H + VN  S                                          + P G+Y+ SG  ++ I   D+ E ++I T  GH   + +V  S DG+   S   D+ + +W T                  NF+    R   S   KRVT    D   ++ D+Y
Sbjct:  140 LNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSH-QCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFS------------------------------------------FHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKT------------------NFDSLNYRELLSKHSKRVT---PDPPPHLMDIY 329

HSP 4 Score: 62.003 bits (149), Expect = 4.130e-10
Identity = 58/254 (22.83%), Postives = 96/254 (37.80%), Query Frame = 2 
Query:  359 LSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCA-WSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
              GH   I    F+ ++  + T S DK++MIW+     R  +F GHT ++  V+                                          ++P G  + S   +  +  W          F  HT S+ SV  S DG  L++ S D +++VW        ER   L   + H    N +RCA +S DG+ +     D+ V +WD  + Q +     + GS     F+     + S  +D  I + +I+
Sbjct:   14 FKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVN------------------------------------------FAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGV------ERKKFLYSLNRHT---NWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR 216
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Xenopus
Match: snrnp40 (small nuclear ribonucleoprotein, U5 40kDa subunit [Source:NCBI gene;Acc:594941])

HSP 1 Score: 379.022 bits (972), Expect = 1.593e-130
Identity = 174/335 (51.94%), Postives = 236/335 (70.45%), Query Frame = 2 
Query:  113 LMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            + +K+PR ++VV            S  PR+S+L AP +LLSGH+GEV+C KF P G  L+SAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV IWD   GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K++ T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GSVNE AFHP EPI+LS +SD +++MGEIQ
Sbjct:   15 VQAKKPRNELVV------------SGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGVTLSSAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSLLFSASTDKTVAIWDCETGERVKRLKGHTSFVNSCYPARRGPQLICTGSDDGTVKLWDFRKKAAVQTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHGDSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSVNEVAFHPEEPIILSAASDKRLYMGEIQ 337

HSP 2 Score: 60.4622 bits (145), Expect = 1.528e-9
Identity = 50/260 (19.23%), Postives = 101/260 (38.85%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  V    N  + +L   ++    ++  G  D ++ VWD+   ++MY + GH  SV   +       LLS + D  + + +++P 
Sbjct:   39 IMLLSGHEGEVYCCKFHPNGVTLSSAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSLLFSASTDKTVAIWDCETGERVKRLKGHTSFVNSCYPARRGPQLICTGSDDGTVKLWDFR--------KKAAVQTFQNTYQ-VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHGDSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 247
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Xenopus
Match: snrnp40 (small nuclear ribonucleoprotein, U5 40kDa subunit [Source:NCBI gene;Acc:594941])

HSP 1 Score: 375.17 bits (962), Expect = 3.849e-129
Identity = 173/321 (53.89%), Postives = 230/321 (71.65%), Query Frame = 2 
Query:  170 SAGDIS-----SIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            SAG IS       PR+S+L AP +LLSGH+GEV+C KF P G  L+SAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV IWD   GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K++ T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GSVNE AFHP EPI+LS +SD +++MGEIQ
Sbjct:   10 SAGSISLSRLLGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGVTLSSAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSLLFSASTDKTVAIWDCETGERVKRLKGHTSFVNSCYPARRGPQLICTGSDDGTVKLWDFRKKAAVQTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHGDSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSVNEVAFHPEEPIILSAASDKRLYMGEIQ 330

HSP 2 Score: 60.077 bits (144), Expect = 1.558e-9
Identity = 50/260 (19.23%), Postives = 101/260 (38.85%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  V    N  + +L   ++    ++  G  D ++ VWD+   ++MY + GH  SV   +       LLS + D  + + +++P 
Sbjct:   32 IMLLSGHEGEVYCCKFHPNGVTLSSAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSLLFSASTDKTVAIWDCETGERVKRLKGHTSFVNSCYPARRGPQLICTGSDDGTVKLWDFR--------KKAAVQTFQNTYQ-VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHGDSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 240
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Xenopus
Match: snrnp40 (small nuclear ribonucleoprotein, U5 40kDa subunit [Source:NCBI gene;Acc:594941])

HSP 1 Score: 374.4 bits (960), Expect = 7.653e-129
Identity = 168/308 (54.55%), Postives = 225/308 (73.05%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR+S+L AP +LLSGH+GEV+C KF P G  L+SAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV IWD   GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K++ T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GSVNE AFHP EPI+LS +SD +++MGEIQ
Sbjct:   23 PRSSSLQAPIMLLSGHEGEVYCCKFHPNGVTLSSAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSLLFSASTDKTVAIWDCETGERVKRLKGHTSFVNSCYPARRGPQLICTGSDDGTVKLWDFRKKAAVQTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHGDSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSVNEVAFHPEEPIILSAASDKRLYMGEIQ 330

HSP 2 Score: 60.077 bits (144), Expect = 1.675e-9
Identity = 50/260 (19.23%), Postives = 101/260 (38.85%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  V    N  + +L   ++    ++  G  D ++ VWD+   ++MY + GH  SV   +       LLS + D  + + +++P 
Sbjct:   32 IMLLSGHEGEVYCCKFHPNGVTLSSAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSLLFSASTDKTVAIWDCETGERVKRLKGHTSFVNSCYPARRGPQLICTGSDDGTVKLWDFR--------KKAAVQTFQNTYQ-VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHGDSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 240
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Xenopus
Match: snrnp40 (small nuclear ribonucleoprotein, U5 40kDa subunit [Source:NCBI gene;Acc:594941])

HSP 1 Score: 373.629 bits (958), Expect = 1.364e-128
Identity = 168/308 (54.55%), Postives = 225/308 (73.05%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR+S+L AP +LLSGH+GEV+C KF P G  L+SAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV IWD   GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K++ T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GSVNE AFHP EPI+LS +SD +++MGEIQ
Sbjct:   16 PRSSSLQAPIMLLSGHEGEVYCCKFHPNGVTLSSAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSLLFSASTDKTVAIWDCETGERVKRLKGHTSFVNSCYPARRGPQLICTGSDDGTVKLWDFRKKAAVQTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHGDSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSVNEVAFHPEEPIILSAASDKRLYMGEIQ 323

HSP 2 Score: 60.4622 bits (145), Expect = 1.102e-9
Identity = 50/260 (19.23%), Postives = 101/260 (38.85%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  V    N  + +L   ++    ++  G  D ++ VWD+   ++MY + GH  SV   +       LLS + D  + + +++P 
Sbjct:   25 IMLLSGHEGEVYCCKFHPNGVTLSSAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSLLFSASTDKTVAIWDCETGERVKRLKGHTSFVNSCYPARRGPQLICTGSDDGTVKLWDFR--------KKAAVQTFQNTYQ-VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHGDSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 233
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Xenopus
Match: snrnp40 (small nuclear ribonucleoprotein, U5 40kDa subunit [Source:NCBI gene;Acc:594941])

HSP 1 Score: 373.629 bits (958), Expect = 1.965e-128
Identity = 168/308 (54.55%), Postives = 225/308 (73.05%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR+S+L AP +LLSGH+GEV+C KF P G  L+SAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV IWD   GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K++ T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GSVNE AFHP EPI+LS +SD +++MGEIQ
Sbjct:   26 PRSSSLQAPIMLLSGHEGEVYCCKFHPNGVTLSSAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSLLFSASTDKTVAIWDCETGERVKRLKGHTSFVNSCYPARRGPQLICTGSDDGTVKLWDFRKKAAVQTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHGDSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSVNEVAFHPEEPIILSAASDKRLYMGEIQ 333

HSP 2 Score: 60.077 bits (144), Expect = 1.626e-9
Identity = 50/260 (19.23%), Postives = 101/260 (38.85%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  V    N  + +L   ++    ++  G  D ++ VWD+   ++MY + GH  SV   +       LLS + D  + + +++P 
Sbjct:   35 IMLLSGHEGEVYCCKFHPNGVTLSSAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSLLFSASTDKTVAIWDCETGERVKRLKGHTSFVNSCYPARRGPQLICTGSDDGTVKLWDFR--------KKAAVQTFQNTYQ-VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHGDSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 243
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Mouse
Match: Snrnp40 (small nuclear ribonucleoprotein 40 (U5) [Source:MGI Symbol;Acc:MGI:1913835])

HSP 1 Score: 374.785 bits (961), Expect = 1.098e-128
Identity = 168/308 (54.55%), Postives = 225/308 (73.05%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR S+L AP +LLSGH+GEV+C KF P GS LASAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV +WD+  GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K+  T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +++YKLPGH GS+NE AFHP EPI+LS SSD +++MGEIQ
Sbjct:   51 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358

HSP 2 Score: 59.6918 bits (143), Expect = 2.280e-9
Identity = 49/260 (18.85%), Postives = 100/260 (38.46%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  V    N  + +L   ++    ++  G  D ++ VWD+   ++ Y + GH  SV   +       LLS + D  + + +++P 
Sbjct:   60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--------KKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Mouse
Match: Snrnp40 (small nuclear ribonucleoprotein 40 (U5) [Source:MGI Symbol;Acc:MGI:1913835])

HSP 1 Score: 374.785 bits (961), Expect = 1.098e-128
Identity = 168/308 (54.55%), Postives = 225/308 (73.05%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR S+L AP +LLSGH+GEV+C KF P GS LASAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV +WD+  GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K+  T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +++YKLPGH GS+NE AFHP EPI+LS SSD +++MGEIQ
Sbjct:   51 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358

HSP 2 Score: 59.6918 bits (143), Expect = 2.280e-9
Identity = 49/260 (18.85%), Postives = 100/260 (38.46%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  V    N  + +L   ++    ++  G  D ++ VWD+   ++ Y + GH  SV   +       LLS + D  + + +++P 
Sbjct:   60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--------KKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Mouse
Match: Wdr5b (WD repeat domain 5B [Source:MGI Symbol;Acc:MGI:1916794])

HSP 1 Score: 152.91 bits (385), Expect = 7.962e-43
Identity = 109/323 (33.75%), Postives = 171/323 (52.94%), Query Frame = 2 
Query:  134 TDVVVTER-REFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTY-GDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTD-SITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKR-VTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            T+ +  ER +   SA      P+  N  A  L L+GH   +   KF+P G +LAS+  D  II+W  Y G+ K    L GH+  I D+ +SSDS  + +AS DKT+ +WD R G+ +K  KGH+  V      +    L  SGS D  +++W+ +      T+ A HS  +  V ++  G  I SG  + +   WD    + ++T A   +  ++ V  S +G ++L+ ++DNTL++WD   + RG RC K   GH +  EK  L  ++SV G++ V  GS D  VY+W++ T +I+ +L GH   V   A HP + I+ S +
Sbjct:    3 TEHLPAERAQSLLSAPRREEEPQKPNY-ALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKK--TLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCD-FNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSA-HSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD---YSRG-RCLKTYTGHKN--EKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAA 314

HSP 2 Score: 70.8626 bits (172), Expect = 3.742e-13
Identity = 44/154 (28.57%), Postives = 82/154 (53.25%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            ++  V +SP G+++ S   + +I  W   +    +T  GH+  I+ VA S+D + L+S S D TL+VWD    +R  +C K + GH  +F   +  C ++     +  GS D++V +W++ TG+ +  L  H   ++   F+ +  +++S S D
Sbjct:   41 AISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWD----MRSGKCLKTLKGH-SDF---VFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYD 186

HSP 3 Score: 65.4698 bits (158), Expect = 2.401e-11
Identity = 40/128 (31.25%), Postives = 64/128 (50.00%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGH+ +I+SV  S +G +L S++ D  + +W          C K + GH       +   AWS D  R+   S DK + VWDM +G+ +  L GH   V    F+P   +++S S D  + + E++
Sbjct:   34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWG----AYDGNCKKTLYGH----SLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK 153
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Mouse
Match: Wdr5 (WD repeat domain 5 [Source:MGI Symbol;Acc:MGI:2155884])

HSP 1 Score: 152.91 bits (385), Expect = 1.217e-42
Identity = 111/329 (33.74%), Postives = 167/329 (50.76%), Query Frame = 2 
Query:  110 ALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITS-VAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDG-KRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            A   K+P T+    +     SA      P   N  A    L+GH   V   KF+P G +LAS+  D+ I +W  Y D K    +SGH   I D+ +SSDS+ + +AS DKT+ IWD   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V ++  G  I S   + +   WD    + ++T     +   S V  S +G ++L+ ++DNTL++WD   + +G +C K   GH +  EK  +   +SV G K +  GS D  VY+W++ T +I+ KL GH   V  TA HP E I+ S +
Sbjct:    2 ATEEKKPETEAARAQPTPSSSATQSKPTPVKPNY-ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD---YSKG-KCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320

HSP 2 Score: 82.8037 bits (203), Expect = 3.618e-17
Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            +V  V +SP G+++ S   + +I  W   + K  +T +GH   I+ VA S+D N L+S S D TL++WD    V   +C K + GH  N+   +  C ++     +  GS D++V +WD+ TG+ +  LP H   V+   F+    +++S S D
Sbjct:   47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192

HSP 3 Score: 60.8474 bits (146), Expect = 6.737e-10
Identity = 36/128 (28.12%), Postives = 65/128 (50.78%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGHT +++SV  S +G +L S+S D  +++W         +  K + GH    +  +   AWS D   +   S DK + +WD+ +G+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Mouse
Match: Wdr83 (WD repeat domain containing 83 [Source:MGI Symbol;Acc:MGI:1915086])

HSP 1 Score: 121.324 bits (303), Expect = 4.746e-31
Identity = 94/301 (31.23%), Postives = 143/301 (47.51%), Query Frame = 2 
Query:  194 PRTSNLLAPNL-LLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTY-GDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVK--NTTHTID-AKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSV 1081
            PR   L    +  L   +G V   +F  +G++  + G D+ + LWN   G +  L   SGH   +LD   S D+  + +   DKTV++WD   G+ V+KF+GH   VN+V   +    +  SGS D  +R WD R +      T+D A+  +  V  S     I +G ++  + ++D+R  ++   + G    IT    S DG   L +S+D+TLR+ D      GE   +  VGH  N +  L  C    D   V+C S D  V+ WD+  G +   LP     V   A+HP EP LL+ 
Sbjct:    8 PRAPELPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--LRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQ-FNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDH--EILAGSVDGRVRRYDLRMGQVSSDYVG--SPITCTCFSRDGQCTLISSLDSTLRLLDKD---TGELLGE-YVGH-KNQQYKLDCCLSERDTHVVSC-SEDGKVFFWDLVEGALALALPVGSNVVQSLAYHPTEPCLLTA 295

HSP 2 Score: 66.6254 bits (161), Expect = 8.296e-12
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2 
Query:  719 MKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
             K ++T      ++ +V  + DGN+ L+   D TL++W+    +RG   T L     H +E  +L  A S D   +  G  DK V +WD+ TGQ++ K  GH G VN   F+    ++LS S D+ +
Sbjct:   15 QKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNP---LRG---TLLRTYSGHGYE--VLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSV 133
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. UniProt/SwissProt
Match: sp|Q2HJH6|SNR40_BOVIN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus OX=9913 GN=SNRNP40 PE=2 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 6.381e-128
Identity = 168/308 (54.55%), Postives = 225/308 (73.05%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR S+L AP +LLSGH+GEV+C KF P GS LASAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV +WD+  GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K+  T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC ++  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GS+NE AFHP EPI+LS SSD +++MGEIQ
Sbjct:   51 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358

HSP 2 Score: 58.9214 bits (141), Expect = 2.245e-8
Identity = 48/260 (18.46%), Postives = 100/260 (38.46%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  +    N  + +L   ++    ++  G  D ++ VWD+   ++ Y + GH  SV   +       LLS + D  + + +++P 
Sbjct:   60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--------KKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. UniProt/SwissProt
Match: sp|Q6PE01|SNR40_MOUSE (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=1 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 7.681e-128
Identity = 168/308 (54.55%), Postives = 225/308 (73.05%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR S+L AP +LLSGH+GEV+C KF P GS LASAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV +WD+  GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K+  T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +++YKLPGH GS+NE AFHP EPI+LS SSD +++MGEIQ
Sbjct:   51 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358

HSP 2 Score: 59.6918 bits (143), Expect = 1.595e-8
Identity = 49/260 (18.85%), Postives = 100/260 (38.46%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  V    N  + +L   ++    ++  G  D ++ VWD+   ++ Y + GH  SV   +       LLS + D  + + +++P 
Sbjct:   60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--------KKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. UniProt/SwissProt
Match: sp|Q96DI7|SNR40_HUMAN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP40 PE=1 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 7.841e-128
Identity = 168/308 (54.55%), Postives = 225/308 (73.05%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR S+L AP +LLSGH+GEV+C KF P GS LASAG DR I+LWN YGD  + A L GH+GA+++L +++D   +++ASTDKTV +WD+  GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K+  T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GS+NE AFHP EPI++S SSD +++MGEIQ
Sbjct:   50 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357

HSP 2 Score: 58.9214 bits (141), Expect = 2.382e-8
Identity = 48/260 (18.46%), Postives = 100/260 (38.46%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+     +     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  +    N  + +L   ++    ++  G  D ++ VWD+   ++ Y + GH  SV   +       LLS + D  + + +++P 
Sbjct:   59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG------------------------------------------AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--------KKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 267
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. UniProt/SwissProt
Match: sp|Q5RF51|SNR40_PONAB (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii OX=9601 GN=SNRNP40 PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 2.800e-126
Identity = 166/308 (53.90%), Postives = 225/308 (73.05%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR S+L AP +LLSGH+GEV+C KF P GS LASAG DR I+LWN YGD  + A L G++GA+++L +++D   +++ASTDKTV +WD+  GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K    T    + VL V ++   D I SGGI+N I  WD+R+ K+  T  GH DS+T +++S++G++LLSN++DNT+RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD++V VWD  + +I+YKLPGH GS+NE AFHP EPI++S SSD +++MGEIQ
Sbjct:   50 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCGNYATLKGYSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRSVCVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357

HSP 2 Score: 56.9954 bits (136), Expect = 9.868e-8
Identity = 48/259 (18.53%), Postives = 98/259 (37.84%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W+                                   DC          N         +V+++ Y+  G  +FS   +  +  WD    + ++   GHT  + S   +  G   + + S D T+++WD R         K  +    N  + +L   ++    ++  G  D ++ VWD+   ++ Y + GH  SV   +       LLS + D  + + +++P 
Sbjct:   59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY--------------------------------GDCG---------NYATLKGYSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--------KKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 267
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. UniProt/SwissProt
Match: sp|Q55AR8|SNR40_DICDI (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium discoideum OX=44689 GN=snrnp40 PE=3 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.032e-105
Identity = 150/309 (48.54%), Postives = 206/309 (66.67%), Query Frame = 2 
Query:  197 RTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMK-IIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQP 1120
            RTS L  P + L GHKGE++  KF   G+ LAS G D+EI LWN YG+  + +VL GH G IL+L +S+DS+ IYTA TDK++ +WD+  GE +K+ + H+ +VNS         L  SGSDD   R++D R K +TH    K+ V  V +S   D + +GGI+NVI  WDIR  +  + T A H D+ITS +VS DG +LLSNS+DN+ ++WD RP+    R  K   G  +NFEKNL++ +WS+DG+R+ CGS+D+ VY+WD  T Q+ Y LPGH G+VNE  FHP+EPI+ S SSD  I++GEI+P
Sbjct:   47 RTSKLEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGEIKP 355
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. TrEMBL
Match: G4VPH0 (U5 snrnp-specific protein-related OS=Schistosoma mansoni OX=6183 GN=Smp_025100 PE=4 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 7.837e-139
Identity = 193/347 (55.62%), Postives = 249/347 (71.76%), Query Frame = 2 
Query:  113 LMSKRPRTD---VVVTE--------RREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQP 1120
            L SK+PR D   + +T           +   AG   SIPRTSNLL+PN+LL+GH+ EV+CGKF+ +GSFLASAG DR I+LW TYG+ +++A + GH GAILDL  SSD   IYTAS+DK++ +WDT   +R+KKF+GH +IVNS +      +  CSGSDD  IRLWD+R K    T    + VL V +S   + IFSGGI+NV+  WD+R+++     +GHTD++T ++VS DG+FLLSNS+DNTLR+WD RPF   +RCTK+  GH H FEKNLLRCAWS+D +R+T GS D+ V+VWD+ T Q++YKLPGH  SVNETAFHP EPILLSV SD KIF+GEI P
Sbjct:   18 LPSKKPRKDGSSLGITPFSNGMYKLNSQIIPAGQAGSIPRTSNLLSPNMLLNGHESEVYCGKFSSDGSFLASAGFDRRILLWETYGECENIATMMGHGGAILDLVLSSDDSVIYTASSDKSIALWDTESAQRIKKFRGHENIVNSCAVARRGPQHVCSGSDDGTIRLWDRRQKACVQTFQNTYQVLSVTFSDTSEMIFSGGIDNVVKGWDLRKLEASMLLSGHTDTVTGLSVSPDGSFLLSNSMDNTLRMWDIRPFAPADRCTKIFTGHQHTFEKNLLRCAWSIDNRRITSGSGDRYVHVWDVNTRQLVYKLPGHTASVNETAFHPTEPILLSVGSDKKIFLGEILP 364
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. TrEMBL
Match: A0A5J4NCD6 (Prp8 binding protein OS=Paragonimus westermani OX=34504 GN=DEA37_0002381 PE=4 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 1.159e-138
Identity = 187/352 (53.12%), Postives = 247/352 (70.17%), Query Frame = 2 
Query:   65 MSVKTITKRPIEYSHALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQP 1120
            MS+  +  +   Y  + ++       V     +   AG   SIPRTSNLL+PN+LL+GH  E++CGKF+ +GSFL SAG DR I+LW TYG+ +++A+++GH GAILD+  SSD   IYTAS+DK++ +W+T   +R+KKF+GH +IVN+        +L CSGSDD  +RLWD+R K    +    + VL V ++   + IFSGGI+N++  WD+R++       GHTD++T +AVS DG+FLLSN +DNTLRVWD RP+  GERCTK  VGH H FEKNLLRCAWSVD +R+TCGS D+ V+VWD  T Q++YKLPGH  SVNETAFHP EPILLSV SD KIF+GEI P
Sbjct:   13 MSMVPLPTKKARYEASALTLSTFGAHVAKSGTQIIPAGKPGSIPRTSNLLSPNMLLNGHDSEIYCGKFSSDGSFLVSAGFDRRILLWETYGECENIALMTGHGGAILDVCLSSDDATIYTASSDKSIALWNTESAQRIKKFRGHQNIVNACGVARRGPQLICSGSDDGTVRLWDRRQKAHVQSFQNTYQVLAVTFNDTAEMIFSGGIDNIVKGWDLRKLDTSMLLTGHTDTVTGLAVSPDGSFLLSNGMDNTLRVWDIRPYAPGERCTKTFVGHQHTFEKNLLRCAWSVDSRRITCGSGDRYVHVWDAVTRQLVYKLPGHTASVNETAFHPKEPILLSVGSDKKIFLGEILP 364
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. TrEMBL
Match: A0A4Z2DQ33 (U5 small nuclear ribonucleoprotein 40 kDa protein isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_010008 PE=4 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 2.750e-138
Identity = 191/347 (55.04%), Postives = 247/347 (71.18%), Query Frame = 2 
Query:  113 LMSKRPRTDVVVTERREFYS-----------AGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQP 1120
            L SK+PR D        F S           A  +  IPRTS+L++PN+LL+GH+ EV+CGKF+ +GSFLAS G DR I+LW TYG+ +++A + GH GAILDL FSSD   IYTAS+DK++ +WDT   +R+KKF+GH +IVNS S      +  CSGSDD  IRLWD+R K+   T    + VL V +S   + IFSGGI+NV+  WD+R+++      GHTD++T ++VS+DG+FLLSN++DNTLR+WD RPF   +RCTK+  GH H FEKNLLRCAWS D +R+TCGS D+ V+VWD+ T Q++YKLPGH  SVNETAFHP EPILLSV SD KIF+GEI P
Sbjct:   18 LPSKKPRKDGSCLTVASFGSGMHKLNSQIVPANQVGGIPRTSSLMSPNMLLNGHESEVYCGKFSSDGSFLASGGFDRRIMLWETYGECENIASMMGHGGAILDLVFSSDDSIIYTASSDKSIALWDTESAQRIKKFRGHENIVNSCSVARRGPQHVCSGSDDGTIRLWDRRQKSCVQTFQNTYQVLSVTFSDTAEMIFSGGIDNVVKGWDLRKLEASMLLNGHTDTVTGLSVSSDGSFLLSNAMDNTLRMWDIRPFAPADRCTKIFTGHQHTFEKNLLRCAWSTDDRRITCGSGDRYVHVWDVNTRQLVYKLPGHTASVNETAFHPTEPILLSVGSDKKIFLGEILP 364
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. TrEMBL
Match: Q5DE69 (SJCHGC06272 protein OS=Schistosoma japonicum OX=6182 PE=2 SV=1)

HSP 1 Score: 407.527 bits (1046), Expect = 3.899e-138
Identity = 191/347 (55.04%), Postives = 247/347 (71.18%), Query Frame = 2 
Query:  113 LMSKRPRTDVVVTERREFYS-----------AGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQP 1120
            L SK+PR D        F S           A  +  IPRTS+L++PN+LL+GH+ EV+CGKF+ +GSFLAS G DR I+LW TYG+ +++A + GH GAILDL FSSD   IYTAS+DK++ +WDT   +R+KKF+GH +IVNS S      +  CSGSDD  IRLWD+R K+   T    + VL V +S   + IFSGGI+NV+  WD+R+++      GHTD++T ++VS+DG+FLLSN++DNTLR+WD RPF   +RCTK+  GH H FEKNLLRCAWS D +R+TCGS D+ V+VWD+ T Q++YKLPGH  SVNETAFHP EPILLSV SD KIF+GEI P
Sbjct:   18 LPSKKPRKDGSCLTIASFGSGMHKLNSQIVPANQVGGIPRTSSLMSPNMLLNGHESEVYCGKFSSDGSFLASGGFDRRIMLWETYGECENIASMMGHGGAILDLVFSSDDSIIYTASSDKSIALWDTESAQRIKKFRGHENIVNSCSVARRGPQHVCSGSDDGTIRLWDRRQKSCVQTFQNTYQVLSVTFSDTAEMIFSGGIDNVVKGWDLRKLEASMLLNGHTDTVTGLSVSSDGSFLLSNAMDNTLRMWDIRPFAPADRCTKIFTGHQHTFEKNLLRCAWSTDDRRITCGSGDRYVHVWDVNTRQLVYKLPGHTASVNETAFHPTEPILLSVGSDKKIFLGEILP 364
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. TrEMBL
Match: C1L4J2 (WD repeat protein 57 OS=Schistosoma japonicum OX=6182 PE=2 SV=1)

HSP 1 Score: 407.527 bits (1046), Expect = 4.593e-138
Identity = 191/347 (55.04%), Postives = 247/347 (71.18%), Query Frame = 2 
Query:  113 LMSKRPRTDVVVTERREFYS-----------AGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQP 1120
            L SK+PR D        F S           A  +  IPRTS+L++PN+LL+GH+ EV+CGKF+ +GSFLAS G DR I+LW TYG+ +++A + GH GAILDL FSSD   IYTAS+DK++ +WDT   +R+KKF+GH +IVNS S      +  CSGSDD  IRLWD+R K+   T    + VL V +S   + IFSGGI+NV+  WD+R+++      GHTD++T ++VS+DG+FLLSN++DNTLR+WD RPF   +RCTK+  GH H FEKNLLRCAWS D +R+TCGS D+ V+VWD+ T Q++YKLPGH  SVNETAFHP EPILLSV SD KIF+GEI P
Sbjct:   18 LPSKKPRKDGSCLAIAPFGSGTHKLNSQIVPANQVGGIPRTSSLMSPNMLLNGHESEVYCGKFSSDGSFLASGGFDRRIMLWETYGECENIASMMGHGGAILDLVFSSDDSIIYTASSDKSIALWDTESAQRIKKFRGHENIVNSCSVARRGPQHVCSGSDDGTIRLWDRRQKSCVQTFQNTYQVLSVTFSDTAEMIFSGGIDNVVKGWDLRKLEASMLLNGHTDTVTGLSVSSDGSFLLSNAMDNTLRMWDIRPFAPADRCTKIFTGHQHTFEKNLLRCAWSTDDRRITCGSGDRYVHVWDVNTRQLVYKLPGHTASVNETAFHPTEPILLSVGSDKKIFLGEILP 364
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Cavefish
Match: snrnp40 (small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:103032740])

HSP 1 Score: 387.111 bits (993), Expect = 9.963e-134
Identity = 176/333 (52.85%), Postives = 244/333 (73.27%), Query Frame = 2 
Query:  122 KRPRTDVVVT-ERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            KRPR+++V   + ++  + G     PR+S+L AP +LLSGH+GEV+C KF P G+ LASAG+DR I+LW+ YGD ++ A L GH+GA+++L +++D   +Y+ASTDKTV +WD+  GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K + HT    + VL V ++   D I SGGI+N I  WD+R+ K+I +  GH DS+T +++S++G++LLSNS+DN++RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GSVNE AFHP EPI+LS SSD +++MGEIQ
Sbjct:   19 KRPRSELVAAAQNQQIATMGP----PRSSSLQAPIMLLSGHEGEVYCCKFHPNGAMLASAGYDRLILLWSVYGDCENFATLKGHSGAVMELHYNTDGSLLYSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSSEGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSSDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYMGEIQ 347

HSP 2 Score: 60.8474 bits (146), Expect = 5.530e-10
Identity = 51/262 (19.47%), Postives = 100/262 (38.17%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFL-LSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEK--NLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W      E     KGH+                                           +V+++ Y+  G  ++S   +  +  WD    + ++   GHT  + S   +  G  L  + S D T+++WD R               +H F+    +L   ++    ++  G  D ++ VWD+   +++Y + GH  SV   +       LLS S D  + + +I+P 
Sbjct:   49 IMLLSGHEGEVYCCKFHPNGAMLASAGYDRLILLWSVYGDCENFATLKGHSG------------------------------------------AVMELHYNTDGSLLYSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIR-----------KKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSSEGSYLLSNSMDNSVRVWDIRPF 257
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Cavefish
Match: snrnp40 (small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:103032740])

HSP 1 Score: 370.163 bits (949), Expect = 1.351e-126
Identity = 176/365 (48.22%), Postives = 245/365 (67.12%), Query Frame = 2 
Query:  122 KRPRTDVVVTERREFYSAGDISSI--PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPI-------------------------------LLSVSSDTKIFMGEIQ 1117
            KRPR+++V   + +      I+++  PR+S+L AP +LLSGH+GEV+C KF P G+ LASAG+DR I+LW+ YGD ++ A L GH+GA+++L +++D   +Y+ASTDKTV +WD+  GERVK+ KGHTS VNS        +L C+GSDD  ++LWD R K + HT    + VL V ++   D I SGGI+N I  WD+R+ K+I +  GH DS+T +++S++G++LLSNS+DN++RVWD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VYVWD  + +I+YKLPGH GSVNE AFHP EPI                               +LS SSD +++MGEIQ
Sbjct:   19 KRPRSELVAAAQNQ-----QIATMGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGAMLASAGYDRLILLWSVYGDCENFATLKGHSGAVMELHYNTDGSLLYSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSSEGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSSDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSVNEVAFHPEEPIGNYLASFYALLFYIYSVCYVKYFILYFFSFTVLSGSSDKRLYMGEIQ 378

HSP 2 Score: 60.4622 bits (145), Expect = 8.483e-10
Identity = 51/262 (19.47%), Postives = 100/262 (38.17%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFL-LSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEK--NLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            + +LSGH G +   +F  +   + +A  D+ +++W      E     KGH+                                           +V+++ Y+  G  ++S   +  +  WD    + ++   GHT  + S   +  G  L  + S D T+++WD R               +H F+    +L   ++    ++  G  D ++ VWD+   +++Y + GH  SV   +       LLS S D  + + +I+P 
Sbjct:   49 IMLLSGHEGEVYCCKFHPNGAMLASAGYDRLILLWSVYGDCENFATLKGHSG------------------------------------------AVMELHYNTDGSLLYSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRK-----------KASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSSEGSYLLSNSMDNSVRVWDIRPF 257
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Cavefish
Match: wdr5 (WD repeat domain 5 [Source:NCBI gene;Acc:103033424])

HSP 1 Score: 150.599 bits (379), Expect = 7.128e-42
Identity = 111/329 (33.74%), Postives = 169/329 (51.37%), Query Frame = 2 
Query:  110 ALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDS-ITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDG-KRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            A   K+P T+   T+     SA    S P   N       L+GH   V   KF+P G +LAS+  D+ I +W  Y D K    +SGH   I D+ +SSDS+ + +AS DKT+ IWD   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V ++  G  I S   + +   WD    + ++T     +  ++ V  S +G ++L+ ++DNTL++WD   + +G +C K   GH +  EK  +   +SV G K +  GS D  VY+W++ T +I+ KL GH   V  TA HP E I+ S +
Sbjct:    2 ATEEKKPETEATKTQTSSAASASQSKSAPVKPNYTL-KFTLAGHTKAVSSVKFSPSGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD---YSKG-KCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320

HSP 2 Score: 83.9593 bits (206), Expect = 1.037e-17
Identity = 55/209 (26.32%), Postives = 97/209 (46.41%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWD----KRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDN--TLRVWDT 838
            L GH   VFC  F P+ + + S   D  + +W+     K L  L  H+  +  + F+ D   I ++S D    IWDT  G+ +K      +   S    S   +   + + D  ++LWD    K +K  T   + K+ +        G +I SG  +N++  W+++  +I+Q   GHTD + S A     N + S +++N  T+++W +
Sbjct:  125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332

HSP 3 Score: 82.8037 bits (203), Expect = 2.788e-17
Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            +V  V +SP G+++ S   + +I  W   + K  +T +GH   I+ VA S+D N L+S S D TL++WD    V   +C K + GH  N+   +  C ++     +  GS D++V +WD+ TG+ +  LP H   V+   F+    +++S S D
Sbjct:   47 AVSSVKFSPSGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192

HSP 4 Score: 60.077 bits (144), Expect = 9.370e-10
Identity = 36/128 (28.12%), Postives = 64/128 (50.00%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGHT +++SV  S  G +L S+S D  +++W         +  K + GH    +  +   AWS D   +   S DK + +WD+ +G+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   40 TLAGHTKAVSSVKFSPSGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Cavefish
Match: wdr5 (WD repeat domain 5 [Source:NCBI gene;Acc:103033424])

HSP 1 Score: 144.436 bits (363), Expect = 8.754e-40
Identity = 110/328 (33.54%), Postives = 165/328 (50.30%), Query Frame = 2 
Query:  110 ALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVD-GKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            A   K+P T+   T+     SA    S P   N       L+GH   V   KF+P G +LAS+  D+ I +W  Y D K    +SGH   I D+ +SSDS+ + +AS DKT+ IWD   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V ++  G  I S   + ++  WD                ++ V  S +G ++L+ ++DNTL++WD   + +G +C K   GH +  EK  +   +SV  GK +  GS D  VY+W++ T +I+ KL GH   V  TA HP E I+ S +
Sbjct:    2 ATEEKKPETEATKTQTSSAASASQSKSAPVKPNYTL-KFTLAGHTKAVSSVKFSPSGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSPQLLLFNWD-----------DDNPPVSFVKFSPNGKYILAATLDNTLKLWD---YSKG-KCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 308

HSP 2 Score: 82.8037 bits (203), Expect = 2.651e-17
Identity = 49/158 (31.01%), Postives = 83/158 (52.53%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIF 1102
            +V  V +SP G+++ S   + +I  W   + K  +T +GH   I+ VA S+D N L+S S D TL++WD    V   +C K + GH  N+   +  C ++     +  GS D++V +WD+ TG+ +  LP H   V+   F+    +++S S    +F
Sbjct:   47 AVSSVKFSPSGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSPQLLLF 196

HSP 3 Score: 60.4622 bits (145), Expect = 8.408e-10
Identity = 36/128 (28.12%), Postives = 64/128 (50.00%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGHT +++SV  S  G +L S+S D  +++W         +  K + GH    +  +   AWS D   +   S DK + +WD+ +G+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   40 TLAGHTKAVSSVKFSPSGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Cavefish
Match: ENSAMXT00000007963.2 (WD repeat-containing protein 5-like [Source:NCBI gene;Acc:103023146])

HSP 1 Score: 143.28 bits (360), Expect = 3.076e-39
Identity = 110/326 (33.74%), Postives = 170/326 (52.15%), Query Frame = 2 
Query:  143 VVTERREFYSAGD---ISSIPRTSNL-LAPN----LLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITS-VAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDG-KRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            + TE ++  SA +    SS P T    + PN      L+GH   +   KF+P G +LAS+  D+ I +W ++ D K    LSGH   I D+ +S DS+ + +AS DKT+ IWD   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V ++  G  I S   + +   WD    + ++T     +   S V  S +G ++L+ ++DNTL++WD   + +G +C K   GH +  EK  +   +SV G K +  GS D  VY+W++ T +I+ KL GH   V  TA HP E I+ S +
Sbjct:    1 MATEEKKPDSATNKTHSSSAPATKPAPVKPNYTLKFTLAGHTKAISSVKFSPNGEWLASSSADKLIKIWGSF-DGKFEKSLSGHKLGISDVAWSPDSNLLVSASDDKTLKIWDMGSGKCLKTLKGHSNYVFCCN-FNPQSNLVVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRMWDSTSGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD---YSKG-KCLKTYTGHKN--EKYCVFANFSVTGGKWIVSGSEDHMVYIWNLQTKEIVQKLQGHADVVIATACHPSENIIASAA 317

HSP 2 Score: 78.1814 bits (191), Expect = 9.449e-16
Identity = 47/154 (30.52%), Postives = 81/154 (52.60%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            ++  V +SP G+++ S   + +I  W   + K  ++ +GH   I+ VA S D N L+S S D TL++WD    +   +C K + GH  N+   +  C ++     V  GS D++V +WD+ TG+ +  LP H   V+   F+    +++S S D
Sbjct:   44 AISSVKFSPNGEWLASSSADKLIKIWGSFDGKFEKSLSGHKLGISDVAWSPDSNLLVSASDDKTLKIWD----MGSGKCLKTLKGH-SNY---VFCCNFNPQSNLVVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 189

HSP 3 Score: 62.3882 bits (150), Expect = 1.656e-10
Identity = 38/128 (29.69%), Postives = 66/128 (51.56%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGHT +I+SV  S +G +L S+S D  +++W +       +  K + GH    +  +   AWS D   +   S DK + +WDM +G+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   37 TLAGHTKAISSVKFSPNGEWLASSSADKLIKIWGSF----DGKFEKSLSGH----KLGISDVAWSPDSNLLVSASDDKTLKIWDMGSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVK 156
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Sea Lamprey
Match: snrnp40 (small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978])

HSP 1 Score: 370.933 bits (951), Expect = 4.079e-128
Identity = 163/308 (52.92%), Postives = 228/308 (74.03%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            PR+S+LLAP +LL+GH+GEV+C KF P G+ LASAG DR I++WN YGD  + A L GH GAILD+ +S+D   I+T+STDKTV +WD+  GER+K+ KGHTS VN+        ++ C+ SDD  ++LWD R K + H+    +  L V ++   D I SGGI+NVI  WD+R+ K+I T  GH DS+T +++S DG++LLSN++DN++R+WD RPF   ERC K+  G++HNFEKNLL+C+WS DG +V+ GSAD+ VY+WD  + +I+YKLPGH GSVN+ AFHP EPI+LS ++D ++++GEIQ
Sbjct:   41 PRSSSLLAPIMLLTGHEGEVYCCKFHPNGNTLASAGFDRTILMWNVYGDCDNYAHLKGHTGAILDIHYSTDGSTIFTSSTDKTVGLWDSETGERIKRLKGHTSFVNACFPARRGPQMVCTASDDGTVKLWDTRKKGSVHSFQNTYQCLSVTFNDTSDQILSGGIDNVIKVWDLRQNKLIYTMKGHNDSVTGLSLSPDGSYLLSNAMDNSVRIWDIRPFAPMERCVKIFQGNVHNFEKNLLKCSWSHDGSKVSAGSADRFVYIWDTTSRRILYKLPGHAGSVNDVAFHPEEPIVLSCANDKRLYLGEIQ 348

HSP 2 Score: 72.7886 bits (177), Expect = 1.454e-14
Identity = 61/292 (20.89%), Postives = 114/292 (39.04%), Query Frame = 2 
Query:  260 GKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVG-ERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEK--NLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            G    +G  L + G  R   L      +  + +L+GH G +   +F  + + + +A  D+T+++W+     +     KGHT                                           ++LD+ YS  G  IF+   +  +  WD    + I+   GHT  + +   +  G   + + S D T+++WDTR             G +H+F+     L   ++    ++  G  D  + VWD+   +++Y + GH  SV   +  P    LLS + D  + + +I+P 
Sbjct:   26 GPAPGQGQQLLAVGPPRSSSL------LAPIMLLTGHEGEVYCCKFHPNGNTLASAGFDRTILMWNVYGDCDNYAHLKGHTG------------------------------------------AILDIHYSTDGSTIFTSSTDKTVGLWDSETGERIKRLKGHTSFVNACFPARRGPQMVCTASDDGTVKLWDTR-----------KKGSVHSFQNTYQCLSVTFNDTSDQILSGGIDNVIKVWDLRQNKLIYTMKGHNDSVTGLSLSPDGSYLLSNAMDNSVRIWDIRPF 258
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Sea Lamprey
Match: POC1A (POC1 centriolar protein A [Source:HGNC Symbol;Acc:HGNC:24488])

HSP 1 Score: 112.079 bits (279), Expect = 1.196e-27
Identity = 76/252 (30.16%), Postives = 119/252 (47.22%), Query Frame = 2 
Query:  236 GHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIK-DLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVW 982
            GHK  V   +F+P G  + SA  D+ + LW     +K +  V   H   +  + FS+D   + TAS DK++ +W     + +     H++ V S       R L  SGSDD  +R+WD   +   HT   +H   V  V + P G  I + G +N +  WDIR  K++Q +  H  ++ S++    GN+L++ S D+TL+V D    V G      +   LH  +      A+S  G     G +D+ V VW
Sbjct:   58 GHKDAVMSVQFSPSGHLVVSASRDKTVRLW--VPSVKGESTVFKAHTATVRSVSFSADGQSLVTASDDKSIKVWTVHRQKFLYSLNQHSNWVRSAKFSPDGR-LIVSGSDDRTVRVWDSNSRECVHTF-YEHGGFVNQVDFHPSGTCIAAAGTDNTVKVWDIRMNKLLQHYQVHGAAVNSLSFHPTGNYLITASNDSTLKVLD---LVEGR-----LFYTLHGHQGPATAVAFSRAGDFFASGGSDEQVMVW 297

HSP 2 Score: 108.612 bits (270), Expect = 2.145e-26
Identity = 82/295 (27.80%), Postives = 130/295 (44.07%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGH-LHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFM 1105
              GH+  +    F P    LAS   D  +++WN     +    + GH  A++ +QFS     + +AS DKTV +W   V      FK HT+ V SVS  +  + L  + SDD  I++W    +   ++++ +HS  V    +SP G  I SG  +  +  WD    + + TF  H   +  V     G  + +   DNT++VWD        R  KL+  + +H    N L  ++   G  +   S D  + V D+  G++ Y L GH G     AF        S  SD ++ +
Sbjct:   14 FKGHRDTITSVDFNPNMKQLASGSMDACLMVWNFKPQTRAYRFV-GHKDAVMSVQFSPSGHLVVSASRDKTVRLWVPSVKGESTVFKAHTATVRSVSFSADGQSL-VTASDDKSIKVWTVHRQKFLYSLN-QHSNWVRSAKFSPDGRLIVSGSDDRTVRVWDSNSRECVHTFYEHGGFVNQVDFHPSGTCIAAAGTDNTVKVWDI-------RMNKLLQHYQVHGAAVNSL--SFHPTGNYLITASNDSTLKVLDLVEGRLFYTLHGHQGPATAVAFSRAGDFFASGGSDEQVMV 296

HSP 3 Score: 80.1073 bits (196), Expect = 9.037e-17
Identity = 58/215 (26.98%), Postives = 102/215 (47.44%), Query Frame = 2 
Query:  479 KKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHT-IDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCA-WSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            + FKGH   + SV    + ++L  SGS D  + +W+ + +   +  +  K +V+ V +SP G  + S   +  +  W          F  HT ++ SV+ S DG  L++ S D +++VW      R +    L      N   N +R A +S DG+ +  GS D+ V VWD  + + ++    H G VN+  FHP    + +  +D  + + +I+
Sbjct:   12 RHFKGHRDTITSVDFNPNMKQL-ASGSMDACLMVWNFKPQTRAYRFVGHKDAVMSVQFSPSGHLVVSASRDKTVRLWVPSVKGESTVFKAHTATVRSVSFSADGQSLVTASDDKSIKVWTVH---RQKFLYSL------NQHSNWVRSAKFSPDGRLIVSGSDDRTVRVWDSNSRECVHTFYEHGGFVNQVDFHPSGTCIAAAGTDNTVKVWDIR 216

HSP 4 Score: 67.3958 bits (163), Expect = 1.512e-12
Identity = 43/173 (24.86%), Postives = 80/173 (46.24%), Query Frame = 2 
Query:  581 WDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
            W +      H    + ++  V ++P    + SG ++  +  W+ +       F GH D++ SV  S  G+ ++S S D T+R+W   P V+GE  + +   H       +   ++S DG+ +   S DK++ VW ++  + +Y L  H   V    F P   +++S S D  +
Sbjct:    4 WQEDPSLERHFKGHRDTITSVDFNPNMKQLASGSMDACLMVWNFKPQTRAYRFVGHKDAVMSVQFSPSGHLVVSASRDKTVRLW--VPSVKGE--STVFKAHT----ATVRSVSFSADGQSLVTASDDKSIKVWTVHRQKFLYSLNQHSNWVRSAKFSPDGRLIVSGSDDRTV 168
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Sea Lamprey
Match: pafah1b1b (platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:NCBI gene;Acc:394247])

HSP 1 Score: 107.457 bits (267), Expect = 1.596e-26
Identity = 75/269 (27.88%), Postives = 118/269 (43.87%), Query Frame = 2 
Query:  356 VLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAK-HSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVD--------------------GKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
             LSGH   +  + F      I +AS D T+ +WD   G+  +  KGHT  V  +S    + ++  S S D  ++LWD +      T+    H+V  VA+ P GD++ S   +  +  W+++    ++TF GH + +  V  + DG+ + S S D T+RVW T         TK     L   E  +   +W+ D                    G  +  GS DK + +WD+ TG  +  L GH   V    FHP    +LS + D  +
Sbjct:   42 ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-FDLSGKMLASCSADMTVKLWDFQSFECLRTMHGHDHNVSSVAFMPNGDHLVSASRDKTMKMWEVQTGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVT--------ATKECKAELREHEHVVECVSWAPDAASPVILEATGAEAKKGGKPGPYLLSGSRDKTIKMWDISTGICVITLVGHDNWVRGVLFHPGGKFILSCADDKTL 301

HSP 2 Score: 100.908 bits (250), Expect = 3.593e-24
Identity = 79/278 (28.42%), Postives = 118/278 (42.45%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTI-DAKHSVLDVAYSP--------------------FGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLH-----NFEKNLLRCAWSVDGKRVTCGSADKNVYVWD 985
            L GH   V    F   G  LAS   D  + LW+ +   + L  + GH+  +  + F  + D + +AS DKT+ +W+ + G  VK F GH   V  V   +    L  S S+D  +R+W    K     + + +H V  V+++P                     G Y+ SG  +  I  WDI     + T  GH + +  V     G F+LS + D TLRVWD     + +RC K +  H H     +F K             V  GS D++V VW+
Sbjct:   85 LKGHTDSVQDISFDLSGKMLASCSADMTVKLWD-FQSFECLRTMHGHDHNVSSVAFMPNGDHLVSASRDKTMKMWEVQTGYCVKTFTGHREWVRMVRP-NQDGSLIASCSNDQTVRVWVTATKECKAELREHEHVVECVSWAPDAASPVILEATGAEAKKGGKPGPYLLSGSRDKTIKMWDISTGICVITLVGHDNWVRGVLFHPGGKFILSCADDKTLRVWD----YKNKRCQKSLAAHEHFVTSLDFHKT---------APYVITGSVDQSVKVWE 347

HSP 3 Score: 72.0182 bits (175), Expect = 2.366e-14
Identity = 52/224 (23.21%), Postives = 90/224 (40.18%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRE-------------------LFCSGSDDCKIRLWDKRVKNTTHTIDAKHS-VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTR 841
            + GH   V    F P G  L SA  D+ + +W        +   +GH   +  ++ + D   I + S D+TV +W T   E   + + H  +V  VS                             SGS D  I++WD        T+    + V  V + P G +I S   +  +  WD +  +  ++ A H   +TS+       ++++ SVD +++VW+ R
Sbjct:  127 MHGHDHNVSSVAFMPNGDHLVSASRDKTMKMWEVQTGYC-VKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVTATKECKAELREHEHVVECVSWAPDAASPVILEATGAEAKKGGKPGPYLLSGSRDKTIKMWDISTGICVITLVGHDNWVRGVLFHPGGKFILSCADDKTLRVWDYKNKRCQKSLAAHEHFVTSLDFHKTAPYVITGSVDQSVKVWECR 349

HSP 4 Score: 49.6766 bits (117), Expect = 4.838e-7
Identity = 41/149 (27.52%), Postives = 69/149 (46.31%), Query Frame = 2 
Query:  677 GGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWD--TRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            GG     ++W  R  +     +GH   +T V      + ++S S D T++VWD  T  F R       + GH  + +      ++ + GK +   SAD  V +WD  + + +  + GH  +V+  AF P+   L+S S D  + M E+Q
Sbjct:   24 GGQRRDPSEWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDYETGDFER------TLKGHTDSVQD----ISFDLSGKMLASCSADMTVKLWDFQSFECLRTMHGHDHNVSSVAFMPNGDHLVSASRDKTMKMWEVQ 161
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Sea Lamprey
Match: taf5l (TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987])

HSP 1 Score: 104.375 bits (259), Expect = 1.102e-24
Identity = 63/205 (30.73%), Postives = 98/205 (47.80%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDA-KHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTR 841
            L  H G V+  +F P G+ L S   D  +  W+      + AV  GH   + D+  S+   +  + S D+T  +W       ++ + GH S VN V           +GS D  +RLW  +  +        + +VL +A+SP G  + SGG +  +  WDI    I++   GH+D IT ++ S DG+ L S S D ++RVWD R
Sbjct:  339 LRAHSGPVYAVRFLPGGAGLLSCSEDASVRFWDPR-TFTNTAVYQGHAYPVWDVDVSALGLYFCSGSHDRTARLWVPERAFPLRVYAGHVSDVNVVR-FHPNGSYVATGSADRTVRLWSAQQGSAARLFTGHRGAVLALAFSPGGRLLASGGEDQRVRLWDIGSGAIVKELRGHSDDITCLSFSPDGSALASGSSDGSVRVWDVR 541

HSP 2 Score: 85.5001 bits (210), Expect = 2.335e-18
Identity = 75/282 (26.60%), Postives = 120/282 (42.55%), Query Frame = 2 
Query:  257 CGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRV-KNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
              + AP    LA+   D  ++LW + G  K     + HN  +  +  + D         DK V   +   G  VK  + H+  V +V  +     L  S S+D  +R WD R   NT       + V DV  S  G Y  SG  +     W       ++ +AGH   +  V    +G+++ + S D T+R+W  +   +G    +L  GH       +L  A+S  G+ +  G  D+ V +WD+ +G I+ +L GH   +   +F P    L S SSD  +
Sbjct:  275 AAEVAPGMGMLAAGYEDSRVMLW-SLGPRK--LRTARHNVDVARINLACD------ILDDKVV---EDSKGSDVKTLRAHSGPVYAVRFLPGGAGLL-SCSEDASVRFWDPRTFTNTAVYQGHAYPVWDVDVSALGLYFCSGSHDRTARLWVPERAFPLRVYAGHVSDVNVVRFHPNGSYVATGSADRTVRLWSAQ---QGS-AARLFTGH----RGAVLALAFSPGGRLLASGGEDQRVRLWDIGSGAIVKELRGHSDDITCLSFSPDGSALASGSSDGSV 535

HSP 3 Score: 73.559 bits (179), Expect = 1.581e-14
Identity = 56/183 (30.60%), Postives = 86/183 (46.99%), Query Frame = 2 
Query:   74 KTITKRPIEYSHALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNL-----LLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNT-YGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNT 604
            +T T   +   HA     P  DV V+    ++ +G   S  RT+ L  P       + +GH  +V   +F P GS++A+   DR + LW+   G    L   +GH GA+L L FS     + +   D+ V +WD   G  VK+ +GH+  +  +S  S       SGS D  +R+WD R  +T
Sbjct:  373 RTFTNTAVYQGHAY----PVWDVDVSALGLYFCSG---SHDRTARLWVPERAFPLRVYAGHVSDVNVVRFHPNGSYVATGSADRTVRLWSAQQGSAARL--FTGHRGAVLALAFSPGGRLLASGGEDQRVRLWDIGSGAIVKELRGHSDDITCLS-FSPDGSALASGSSDGSVRVWDVRGAST 545
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008862.1 (pep scaffold:Pmarinus_7.0:GL476579:86637:114999:1 gene:ENSPMAG00000008000.1 transcript:ENSPMAT00000008862.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 97.4413 bits (241), Expect = 2.452e-22
Identity = 79/276 (28.62%), Postives = 119/276 (43.12%), Query Frame = 2 
Query:  197 RTSNLLAPNLLLSGHKGEVF-CGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPG 1021
            R   + AP +L  GH   V  C +F   G+ + S   D  + +W+     K L  L GH G +   Q   +   I + STD+T+ +W+   G+ V    GHTS V  +    H   +  SGS D  +R+WD       H + A H          G  + SG  +  +  WD      + T  GHT+ + S+    DG  ++S S+D ++RVWD         C   +VGH        L     +    +  G+AD  V +WD+ TGQ +  L G
Sbjct:  219 RCGEIRAPKVL-KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTG-KCLRTLVGHTGGVWSSQMRGNI--IVSGSTDRTLKVWNADTGQCVHTLYGHTSTVRCMHL--HGNRVV-SGSRDATLRVWDIETGQCLHVL-AGHVAAVRCVQYDGRRVVSGAYDYTVKVWDPESETCLHTLQGHTNRVYSLQF--DGVHIVSGSLDTSIRVWDAETGT----CLHTLVGH------QSLTSGMELRDNILVSGNADSTVKIWDIKTGQCLQTLQG 472

HSP 2 Score: 88.5817 bits (218), Expect = 1.819e-19
Identity = 70/263 (26.62%), Postives = 121/263 (46.01%), Query Frame = 2 
Query:  335 GDIKDLAVLSGHNGAILD-LQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTR-ELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            G+I+   VL GH+  ++  LQF  +   I + S D T+ +W    G+ ++   GHT  V S    S  R  +  SGS D  +++W+       HT+    S +   +   G+ + SG  +  +  WDI   + +   AGH  ++    V  DG  ++S + D T++VWD       E C   + GH +         +   DG  +  GS D ++ VWD  TG  ++ L GH      +     + IL+S ++D+ + + +I+
Sbjct:  221 GEIRAPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS----SQMRGNIIVSGSTDRTLKVWNADTGQCVHTLYGHTSTVRCMHL-HGNRVVSGSRDATLRVWDIETGQCLHVLAGHVAAVR--CVQYDGRRVVSGAYDYTVKVWDPE----SETCLHTLQGHTNRVY------SLQFDGVHIVSGSLDTSIRVWDAETGTCLHTLVGHQSLT--SGMELRDNILVSGNADSTVKIWDIK 462

HSP 3 Score: 72.7886 bits (177), Expect = 3.181e-14
Identity = 56/207 (27.05%), Postives = 94/207 (45.41%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAG---HTDSITSVAVSNDGNFLLSNSVDNTLRVWDTR 841
            L GH   V C      G+ + S   D  + +W+     + L VL+GH  A+  +Q+  D   + + + D TV +WD      +   +GHT   N V ++        SGS D  IR+WD       HT+   H  L        + + SG  ++ +  WDI+  + +QT  G   H  ++T +  S     ++++S D T+++WD R
Sbjct:  310 LYGHTSTVRCMHL--HGNRVVSGSRDATLRVWDIETG-QCLHVLAGHVAAVRCVQY--DGRRVVSGAYDYTVKVWDPESETCLHTLQGHT---NRVYSLQFDGVHIVSGSLDTSIRVWDAETGTCLHTL-VGHQSLTSGMELRDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFSR--KLVVTSSDDGTVKLWDLR 505
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Yeast
Match: RSA4 (WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus [Source:SGD;Acc:S000000668])

HSP 1 Score: 110.153 bits (274), Expect = 6.236e-27
Identity = 81/253 (32.02%), Postives = 116/253 (45.85%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWD--KRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVW 982
            +SGH   V C K+  +G  L S  HDR + +W+     + + +L  H   +  L  S+D   +   + D T     T    + K  + +  I        ++ E+  + SDD  + LW+  K  K        +  V  VA+SP G YI S   +N I  WD R+ K I TF GH  S+  VA S+D   L+S S D TL+VWD R        T+ +   L   +  +    WSVDGKRV  G  DK V +W
Sbjct:  274 MSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYA-LRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNG---NSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVR--------TRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513

HSP 2 Score: 82.4185 bits (202), Expect = 1.241e-17
Identity = 80/349 (22.92%), Postives = 145/349 (41.55%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPE-GSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERV-KKFKGHTSIVNSVS------AVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDA-KHSVLDVAYSPFGDYIFSGGIENVINQWDIREM-KIIQTFAGHTDSITSVAVSND------------------------------------GN---FLLSNSVDNTLRVWD----TRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            ++GH   + C  FAP   S + +   D    +W+       +  L GH   +L + +S D + I T S D T+ +WD + G+ +    +GH+  + S+S          ++    S S D  I++WD   +   +T+    +SV  V +   G  ++SG  +  +  WDI    + I     H   +  +++S D                                    GN    +++ S D T+ +W+    T+P  R       M GH    +K +   A+S DG+ +   S D ++ +WD   G+ +    GHV SV + A+     +L+S S DT + + +++
Sbjct:  139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTP-MHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIAR-------MTGH----QKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVR 474

HSP 3 Score: 82.0333 bits (201), Expect = 1.435e-17
Identity = 89/344 (25.87%), Postives = 133/344 (38.66%), Query Frame = 2 
Query:  149 TERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSS-------DSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRE-LFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGG-------------------IEN----------------------VINQWD-IREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTR--PFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGH 1024
            T  R    AGD ++     +   P   L GH   V C  ++P+G  +A+   D  I LW+          L GH+  I  L +             + ++S D T+ IWDT          GHT   NSVS V    + L  SGS D  +R+WD   +     I   H+      S   DY    G                   +EN                       +  W+ ++  K I    GH   +  VA S DG +++S S DN++++WD R   F+   R      GH+     ++ + AWS D + +   S D  + VWD+ T ++   LPGH
Sbjct:  155 TSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHT---NSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFR------GHV----ASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGH 485

HSP 4 Score: 60.8474 bits (146), Expect = 1.218e-10
Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 2 
Query:  218 PNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVS-AVSHTRELFCSGSDDCKIRLW 583
            P   ++GH+  V    F+P+G ++ SA  D  I LW+   D K ++   GH  ++  + +SSD   + + S D T+ +WD R  +      GH   V +V  +V   R   CSG  D  +RLW
Sbjct:  394 PIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGR-DGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKR--VCSGGKDKMVRLW 513
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Yeast
Match: TAF5 (Subunit (90 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification [Source:SGD;Acc:S000000402])

HSP 1 Score: 99.7525 bits (247), Expect = 3.349e-23
Identity = 64/206 (31.07%), Postives = 105/206 (50.97%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHT-IDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGH-TDSITSVAVSNDGNFLLSNSVDNTLRVWDTR 841
            L GH G V+   F+P+  +L S   D+ + LW+       L    GHN  + D+ FS    +  TAS D+T  +W       ++ F GH + V+ VS   +   +F +GS D   R+WD    ++    +     V+ +A  P G ++ +G  + +IN WDI   K ++   GH  ++I S++ S +GN L+S   D+T+RVWD +
Sbjct:  521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTA-LVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVF-TGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724

HSP 2 Score: 93.9745 bits (232), Expect = 2.761e-21
Identity = 70/240 (29.17%), Postives = 105/240 (43.75%), Query Frame = 2 
Query:  356 VLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLD-VAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPIL 1072
             L GH+G +    FS D+ ++ + S DKTV +W       +  +KGH   V  VS  S     F + S D   RLW               + +D V++ P G Y+F+G  +     WD+     ++ F GHT  + S+AV  DG +L + S D  + VWD      G+R  K M GH  N    +   ++S +G  +  G AD  V VWD+              +  E +  P EP +
Sbjct:  520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVS-FSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWD---IGTGKRL-KQMRGHGKNA---IYSLSYSKEGNVLISGGADHTVRVWDLKK------------ATTEPSAEPDEPFI 739

HSP 3 Score: 86.2705 bits (212), Expect = 8.257e-19
Identity = 52/165 (31.52%), Postives = 90/165 (54.55%), Query Frame = 2 
Query:  236 GHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWD----KRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIRE 718
            GH   V+   F+P G + A+A HD+   LW+    I  L + +GH   +  + F  +  +++T S+DKT  +WD   G+ V+ F GHT+ V S++     R L  +GS+D  I +WD    KR+K        K+++  ++YS  G+ + SGG ++ +  WD+++
Sbjct:  565 GHNHPVWDVSFSPLGHYFATASHDQTARLWSC-DHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWL-STGSEDGIINVWDIGTGKRLKQMRG--HGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKK 725

HSP 4 Score: 78.5666 bits (192), Expect = 3.386e-16
Identity = 55/187 (29.41%), Postives = 87/187 (46.52%), Query Frame = 2 
Query:  479 KKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTI-----DAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGH 1024
            K   GH+  V S S  S   +   SGS+D  +RLW       THT         H V DV++SP G Y  +   +     W    +  ++ FAGH + +  V+   +G ++ + S D T R+WD    V      +L +GH       ++  A   DG+ ++ GS D  + VWD+ TG+ + ++ GH
Sbjct:  519 KTLVGHSGTVYSTS-FSPDNKYLLSGSEDKTVRLWSM----DTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD----VSTGDSVRLFLGHT----APVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGH 692

HSP 5 Score: 73.9442 bits (180), Expect = 1.052e-14
Identity = 49/188 (26.06%), Postives = 91/188 (48.40%), Query Frame = 2 
Query:  212 LAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWN-TYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRE--LFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITS 766
            + P  + +GH  +V C  F P G ++ +   D+   +W+ + GD   + +  GH   ++ +    D  W+ T S D  + +WD   G+R+K+ +GH    N++ ++S+++E  +  SG  D  +R+WD +   T  + +           PF  Y+  G +   INQ DI+E    +T    +D + S
Sbjct:  599 IYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGD--SVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGK--NAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPDE--------PFIGYL--GDVTASINQ-DIKEYGRRRTVIPTSDLVAS 771
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Yeast
Match: PRP4 (Splicing factor; component of the U4/U6-U5 snRNP complex [Source:SGD;Acc:S000006382])

HSP 1 Score: 92.8189 bits (229), Expect = 4.058e-21
Identity = 58/207 (28.02%), Postives = 102/207 (49.28%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNT---THTIDAKHSVLDVAYSPF--GDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWD 835
            L GH+  +   K+ P G F+ SA HD    LW+     ++L +  GH+  +  L F  D   + +   D   M+WD R G +V    GH+  + +V+   +  ++   G D   I +WD R ++       +  ++ V  V +S    G  + S G +N+IN +       + + AGHTD I S+ +SN+ +FL+S   D ++++W+
Sbjct:  261 LVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTH-QELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGI-INVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN 465

HSP 2 Score: 72.4034 bits (176), Expect = 2.067e-14
Identity = 67/227 (29.52%), Postives = 106/227 (46.70%), Query Frame = 2 
Query:  326 NTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIR---EMKIIQTFAGHTDSITSVAVSND--GNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWD 985
            N  G ++ L  L GH   I D+++     +I +AS D T  +WD    + +   +GH   V S+S       L CSG  D    LWD R  +   T+ A HS  +  VA+SP G  + +GG + +IN WDIR   E ++ Q  A H + +T V  S +  G  L+S   DN + V+ +         T L +G L      ++    S +   +  G  D+++ +W+
Sbjct:  250 NEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLS-FQCDGSLVCSGGMDSLSMLWDIRSGSKVMTL-AGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILA-HRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSD--------TWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN 465

HSP 3 Score: 50.447 bits (119), Expect = 2.309e-7
Identity = 34/117 (29.06%), Postives = 52/117 (44.44%), Query Frame = 2 
Query:  638 DVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDM 988
            DV Y P G +I S   +     WD    + +    GH   + S++   DG+ + S  +D+   +WD R    G +   L  GH     K +   AWS +G +V  G  D  + VWD+
Sbjct:  270 DVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRS---GSKVMTL-AGH----SKPIYTVAWSPNGYQVATGGGDGIINVWDI 378
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Yeast
Match: CDC40 (Pre-mRNA splicing factor; important for catalytic step II of pre-mRNA splicing and plays a role in cell cycle progression, particularly at the G1/S phase transition; required for DNA synthesis during mitosis and meiosis; has WD repeats; thermosensitivity of the cdc40 null mutant is functionally complemented by a chimeric construct containing the N-terminal 156 amino acids of yeast Cdc40p fused to the C-terminal two thirds (297 amino acids) of human CDC40 [Source:SGD;Acc:S000002772])

HSP 1 Score: 88.9669 bits (219), Expect = 5.789e-20
Identity = 73/286 (25.52%), Postives = 129/286 (45.10%), Query Frame = 2 
Query:  236 GHKGEVFCGKFAPE-GSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAK----HSVLDVAYSPFGDYIFSGGIENVINQWDIR---EMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIM--YKLPGHVGSVNETAFHPHE 1063
            GH       KF P+ G  + S G+D  I +W+ Y D + L    GHN  I  L+F+ D     ++S D++V IWDT  G+   +   +++  +  S  ++  E F  G  + KI  +D RV      +        S+L + Y P G    S   +  +  W+ +    +K I   A H+    +V  S   N+  + S+DN +  +  +P  +     K+  G  H+     +  A+S DG+ +  G +   ++ WD  T +++   K+PG+   + +  +HP E
Sbjct:  160 GHPEGTTALKFLPKTGHLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDTETGKVKTRLHLNSTPADVESRPTNPHE-FIVGLSNSKILHYDDRVSENQGLVQTYDHHLSSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQ--NYFCAQSMDNRIYSFSLKPKYK-RHPKKIFKG--HSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWNTSRLLNNIKIPGN-KPITQVDWHPQE 438
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Yeast
Match: ASC1 (G-protein beta subunit and guanine dissociation inhibitor for Gpa2p; ortholog of RACK1 that inhibits translation; core component of the small (40S) ribosomal subunit; required to prevent frameshifting at ribosomes stalled at repeated CGA codons; regulates P-body formation induced by replication stress; represses Gcn4p in the absence of amino acid starvation [Source:SGD;Acc:S000004722])

HSP 1 Score: 87.8113 bits (216), Expect = 6.084e-20
Identity = 74/307 (24.10%), Postives = 120/307 (39.09%), Query Frame = 2 
Query:  230 LSGHKGEVF-CGKFAPEGSFLASAGHDREIILWNTYGDIKDLAV----LSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDY------IFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWD-----------------------TRPFVRGERCTKLMV-----------------GHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTG 997
            L GH G V      A + + L SA  D+ +I W   GD +   V      GH+  + D   ++D  +  +AS DKT+ +WD   GE  ++F GH S V SV  +     +  SGS D  I++W  + +     +     V  V   P          I S G + ++  W++ + +I   F GH  +I ++  S DG  + S   D  + +W+                        R ++     T + V                 G+    E + +  AWS DG+ +  G  D  + VW + T 
Sbjct:   13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVD-IDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318

HSP 2 Score: 71.2478 bits (173), Expect = 2.684e-14
Identity = 66/257 (25.68%), Postives = 102/257 (39.69%), Query Frame = 2 
Query:  359 LSGHNGAILDLQFSS-DSDWIYTASTDKTVMIW-----DTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSA--DKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFM 1105
            L GHNG +  L  S+   + + +AS DKT++ W     D + G  V+ FKGH+ IV                  DC            T T D             G Y  S   +  +  WD+   +  Q F GH   + SV +    + ++S S D T++VW     ++G+ C   ++GH     +  +      D   VT  SA  DK V  W++   QI     GH  ++N     P   ++ S   D +I +
Sbjct:   13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ-----------------DC------------TLTAD-------------GAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT----IKGQ-CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIML 222
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Nematostella
Match: EDO46331 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQB4])

HSP 1 Score: 348.977 bits (894), Expect = 3.327e-119
Identity = 164/313 (52.40%), Postives = 216/313 (69.01%), Query Frame = 2 
Query:  182 ISSIP-RTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            I ++P RTS L +P +LL+GH+GE++  +F P G  LAS G DR I LWN YG+ ++ AVL GH GAI+D+ FS+D + ++TASTDKTV +WD   G R+K+ KGHTS VNS        +   SGSDD  I+LWD R +    T      V  VA+S   D IFSGGI+N I  WD+R+  ++   +GHTD++T V +S DG+FLLSNS+DNT+R+WD R F   ERC K+ +G  HNFEKNL++C+WS DG  +  GSAD+ VYVWD  + +I+YKLPGH GSVN+  FHP EPILLS  SD K+F+GE+Q
Sbjct:   37 IQALPNRTSALESPIMLLTGHEGEIYSSRFHPSGETLASVGFDRLIYLWNVYGECENFAVLKGHTGAIMDVHFSTDGNTMFTASTDKTVALWDYETGARMKRLKGHTSFVNSCCPSRRGMQYVVSGSDDSTIKLWDTRKRGCAQTFQNVFQVTAVAFSDASDQIFSGGIDNEIKVWDLRKNDVLYKMSGHTDTVTGVQLSPDGSFLLSNSMDNTVRMWDVRAFAPMERCLKVFLGAQHNFEKNLIKCSWSPDGLMIAAGSADRFVYVWDTNSRRILYKLPGHAGSVNDAHFHPTEPILLSCGSDKKLFLGELQ 349
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Nematostella
Match: EDO35821 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKD9])

HSP 1 Score: 138.658 bits (348), Expect = 3.556e-38
Identity = 97/295 (32.88%), Postives = 149/295 (50.51%), Query Frame = 2 
Query:  227 LLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTI---DAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLP-GHVGSVNETAFHPHEPILLSVSSDTKI 1099
            LL GH+G V   +F  +G++  + G D+ + LWN +   + L   SGH   +LD   + DS  I + S D+TV++WD   G+ +++++GHTS VN V        +  SGS D  IR WD R ++        DAK SV  V  S     I SG ++  +  +DIR   +     G  + +TSV  + DG  +L +S+DNT+R+ D      GE   +   GH  N E  L  C    D   V  GS D +++ WD+   ++++ L   H G     ++HP +  LLS SSD ++
Sbjct:   14 LLQGHQGAVRAVRFNSDGNYCLTCGSDKILALWNPHKATR-LKTYSGHGYEVLDAVAAGDSSRIASCSADRTVVLWDVSTGQVIRRYRGHTSRVNCVKFNQPDSTVIISGSYDSTIRCWDCRSRSQEPVQVIDDAKDSVTSVHVSSH--EILSGSVDCKVRNYDIRMGTMHADCIG--EPVTSVTFTQDGQCILVSSLDNTVRLMDKDT---GELLNEFK-GH-QNKEYKLDSCLNHTD-THVISGSEDGSIHFWDLIEAKLIFSLEKAHKGVAYSLSYHPKDSCLLSASSDGEV 297
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Nematostella
Match: EDO33297 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSL6])

HSP 1 Score: 131.339 bits (329), Expect = 5.260e-35
Identity = 95/287 (33.10%), Postives = 152/287 (52.96%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDS-ITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDG-KRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLS 1078
            L+GH   V   KF+  G +LAS+  D+ I +W  Y D K    ++GH   I D+ +S+DS  + +AS DKT+ IWD   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V ++  G  I S   + +   WD    + ++T     +  ++ V  S +G ++L+ ++DNTL++WD   + +G +C K   GH +  EK  +   +SV G K +  GS D  VY+W++ + +++ KL GH   V   A HP E I+ S
Sbjct:   61 LTGHNKAVSSVKFSHNGEWLASSSADKVIKIWGAY-DGKFEKTITGHKLGISDVAWSTDSRHLVSASDDKTLKIWDFATGKCLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVTAVHFNRDGALIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD---YSKG-KCLKTYTGHKN--EKYCVFANFSVTGGKWIVSGSEDHKVYIWNLQSKEVVQKLDGHSDVVLCCACHPTENIIAS 338

HSP 2 Score: 77.0258 bits (188), Expect = 1.014e-15
Identity = 58/235 (24.68%), Postives = 103/235 (43.83%), Query Frame = 2 
Query:  149 TERREFYSAGDISSIPRTSNLLAPNL-LLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWD----KRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDN--TLRVW 832
            T+ R   SA D  ++          L  L GH   VFC  F P+ + + S   D  + +W+     K L  L  H+  +  + F+ D   I ++S D    IWDT  G+ +K      +   S    S   +   + + D  ++LWD    K +K  T   + K+ V        G +I SG  ++ +  W+++  +++Q   GH+D +   A     N + S +++N  T+++W
Sbjct:  117 TDSRHLVSASDDKTLKIWDFATGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLPAHSDPVTAVHFNRDGALIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCVFANFSVTGGKWIVSGSEDHKVYIWNLQSKEVVQKLDGHSDVVLCCACHPTENIIASGALENDKTIKIW 350

HSP 3 Score: 75.0998 bits (183), Expect = 4.322e-15
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            +V  V +S  G+++ S   + VI  W   + K  +T  GH   I+ VA S D   L+S S D TL++WD   F  G +C K + GH  N+   +  C ++     +  GS D++V +WD+ TG+ +  LP H   V    F+    +++S S D
Sbjct:   67 AVSSVKFSHNGEWLASSSADKVIKIWGAYDGKFEKTITGHKLGISDVAWSTDSRHLVSASDDKTLKIWD---FATG-KCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVTAVHFNRDGALIVSSSYD 212

HSP 4 Score: 62.3882 bits (150), Expect = 6.781e-11
Identity = 35/128 (27.34%), Postives = 64/128 (50.00%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T  GH  +++SV  S++G +L S+S D  +++W         +  K + GH    +  +   AWS D + +   S DK + +WD  TG+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   60 TLTGHNKAVSSVKFSHNGEWLASSSADKVIKIWG----AYDGKFEKTITGH----KLGISDVAWSTDSRHLVSASDDKTLKIWDFATGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 179
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Nematostella
Match: EDO45346 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RTA6])

HSP 1 Score: 127.102 bits (318), Expect = 6.646e-33
Identity = 82/265 (30.94%), Postives = 126/265 (47.55%), Query Frame = 2 
Query:  236 GHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIK-DLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTI-DAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGH----LHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYK 1012
            GHK  +   KF+P G  +ASA  D+ + LW     +K +  V   H   +  + FS D   + TAS DK++ +W     + +     H + V   +  S    L  SGSDD  I+LWD+  K+  HT  D    V  V + P G  I +GG ++ +  WDIR  K++Q +  HT ++ SV+    GN+L+S S D TL++ D            LM G     LH  +       +S +G+    GS+D+ V VW     ++ Y+
Sbjct:   58 GHKDAILSVKFSPSGHLIASASRDKTVRLW--VPSVKGESTVFKAHTATVRSVDFSGDGQSLLTASDDKSLKVWTVHRQKFLYSLNAHMNWVR-CAKFSPDGRLIVSGSDDKTIKLWDRTSKDCVHTFYDPGGFVNSVEFHPSGTCIAAGGTDSTVKVWDIRMNKLLQHYQAHTGAVNSVSFHPSGNYLVSASSDTTLKILD------------LMEGRLFYTLHGHQGPATSVVFSRNGEYFASGSSDEQVMVWKTNFDKVDYQ 307

HSP 2 Score: 103.219 bits (256), Expect = 2.001e-24
Identity = 79/305 (25.90%), Postives = 131/305 (42.95%), Query Frame = 2 
Query:  200 TSNLLAPNLL--LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVA-YSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFM 1105
            TS+L  P L     GH+  V    F P    L +   D  +++W+    ++    + GH  AIL ++FS     I +AS DKTV +W   V      FK HT+ V SV      + L  + SDD  +++W    +   ++++A  + +  A +SP G  I SG  +  I  WD      + TF      + SV     G  + +   D+T++VWD R           ++ H       +   ++   G  +   S+D  + + D+  G++ Y L GH G      F  +     S SSD ++ +
Sbjct:    2 TSSLEDPTLERHFKGHRDTVTSVDFNPNMKQLVTGSMDSSLMIWHFKPHMRAYRFV-GHKDAILSVKFSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTATVRSVDFSGDGQSLL-TASDDKSLKVWTVHRQKFLYSLNAHMNWVRCAKFSPDGRLIVSGSDDKTIKLWDRTSKDCVHTFYDPGGFVNSVEFHPSGTCIAAGGTDSTVKVWDIR--------MNKLLQHYQAHTGAVNSVSFHPSGNYLVSASSDTTLKILDLMEGRLFYTLHGHQGPATSVVFSRNGEYFASGSSDEQVMV 296

HSP 3 Score: 98.9821 bits (245), Expect = 6.855e-23
Identity = 66/260 (25.38%), Postives = 114/260 (43.85%), Query Frame = 2 
Query:  359 LSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDA-KHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI*MFF 1135
              GH   +  + F+ +   + T S D ++MIW  +   R  +F GH   + SV   S +  L  S S D  +RLW   VK  +    A   +V  V +S  G  + +   +  +  W +   K + +   H + +     S DG  ++S S D T+++WD        R +K  V   ++    +    +   G  +  G  D  V VWD+   +++     H G+VN  +FHP    L+S SSDT + + ++    +F+
Sbjct:   14 FKGHRDTVTSVDFNPNMKQLVTGSMDSSLMIWHFKPHMRAYRFVGHKDAILSVK-FSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTATVRSVDFSGDGQSLLTASDDKSLKVWTVHRQKFLYSLNAHMNWVRCAKFSPDGRLIVSGSDDKTIKLWD--------RTSKDCVHTFYDPGGFVNSVEFHPSGTCIAAGGTDSTVKVWDIRMNKLLQHYQAHTGAVNSVSFHPSGNYLVSASSDTTLKILDLMEGRLFY 264

HSP 4 Score: 78.5666 bits (192), Expect = 4.828e-16
Identity = 60/215 (27.91%), Postives = 99/215 (46.05%), Query Frame = 2 
Query:  479 KKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWD-KRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCA-WSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            + FKGH   V SV    + ++L  +GS D  + +W  K        +  K ++L V +SP G  I S   +  +  W          F  HT ++ SV  S DG  LL+ S D +L+VW     V  ++    +  H+     N +RCA +S DG+ +  GS DK + +WD  +   ++      G VN   FHP    + +  +D+ + + +I+
Sbjct:   12 RHFKGHRDTVTSVDFNPNMKQL-VTGSMDSSLMIWHFKPHMRAYRFVGHKDAILSVKFSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTATVRSVDFSGDGQSLLTASDDKSLKVWT----VHRQKFLYSLNAHM-----NWVRCAKFSPDGRLIVSGSDDKTIKLWDRTSKDCVHTFYDPGGFVNSVEFHPSGTCIAAGGTDSTVKVWDIR 216

HSP 5 Score: 75.8702 bits (185), Expect = 3.512e-15
Identity = 52/204 (25.49%), Postives = 80/204 (39.22%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKD-LAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDT 838
            L+ H   V C KF+P+G  + S   D+ I LW+     KD +       G +  ++F      I    TD TV +WD R+ + ++ ++ HT  VNSVS                                          + P G+Y+ S   +  +   D+ E ++  T  GH    TSV  S +G +  S S D  + VW T
Sbjct:  140 LNAHMNWVRCAKFSPDGRLIVSGSDDKTIKLWDRTS--KDCVHTFYDPGGFVNSVEFHPSGTCIAAGGTDSTVKVWDIRMNKLLQHYQAHTGAVNSVS------------------------------------------FHPSGNYLVSASSDTTLKILDLMEGRLFYTLHGHQGPATSVVFSRNGEYFASGSSDEQVMVWKT 299
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Nematostella
Match: EDO34865 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN68])

HSP 1 Score: 114.775 bits (286), Expect = 1.617e-28
Identity = 83/291 (28.52%), Postives = 127/291 (43.64%), Query Frame = 2 
Query:  224 LLLSGHKGEVFCGKFA-PEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFG-DYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            L L GHK  V+   F  P G  +A+   D+   LWN     K      GH+  I+ L F+  S  I T S D T  +WD + G  +    GH++ + S +  S   +L  +GS D  + +WD R     HT+      +  A   F   +I +G ++     WD    K I T  GH D +  VA    G  + + S D T RV++         C   + GH    E  + +  ++  G R+   S+DK   +WD  TG+ +  L GH   +   AF+    I+++ S D
Sbjct:  128 LTLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWNAETG-KCYHTYRGHSAEIVCLAFNPQSTVIATGSMDTTAKLWDVQTGAEISTLSGHSAEIISCAFNSTGTQLL-TGSFDHTVSVWDTRSGRRVHTLIGHRGEISNAQFNFDCSFIVTGSMDKTCKIWDAGTGKCIGTLRGHDDEVLDVAFDYTGQLIATASADGTGRVYNALT----HHCLSKLEGH----EGEISKITFNAQGTRLLTASSDKTARLWDPNTGKCLQVLEGHTDEIFSCAFNYDGDIIITGSKD 408

HSP 2 Score: 104.76 bits (260), Expect = 6.222e-25
Identity = 67/246 (27.24%), Postives = 117/246 (47.56%), Query Frame = 2 
Query:  356 VLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS-VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            +L  H   + ++ F+       T S D+T  +WDT  GE     +GH ++V +++  +   +   +GS D   +LW+       HT     + ++ +A++P    I +G ++     WD++    I T +GH+  I S A ++ G  LL+ S D+T+ VWDTR    G R    ++GH       +    ++ D   +  GS DK   +WD  TG+ +  L GH   V + AF     ++ + S+D
Sbjct:   87 ILRAHILPLTNVAFNKSGTSFITGSYDRTCKVWDTASGEETLTLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWNAETGKCYHTYRGHSAEIVCLAFNPQSTVIATGSMDTTAKLWDVQTGAEISTLSGHSAEIISCAFNSTGTQLLTGSFDHTVSVWDTRS---GRR-VHTLIGH----RGEISNAQFNFDCSFIVTGSMDKTCKIWDAGTGKCIGTLRGHDDEVLDVAFDYTGQLIATASAD 324

HSP 3 Score: 104.375 bits (259), Expect = 7.128e-25
Identity = 67/250 (26.80%), Postives = 110/250 (44.00%), Query Frame = 2 
Query:  236 GHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDA-KHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVW 982
            GH  E+ C  F P+ + +A+   D    LW+      +++ LSGH+  I+   F+S    + T S D TV +WDTR G RV    GH   +++ +  +       +GS D   ++WD        T+      VLDVA+   G  I +   +     ++      +    GH   I+ +  +  G  LL+ S D T R+WD        +C +++ GH       +  CA++ DG  +  GS D    +W
Sbjct:  175 GHSAEIVCLAFNPQSTVIATGSMDTTAKLWDVQTG-AEISTLSGHSAEIISCAFNSTGTQLLTGSFDHTVSVWDTRSGRRVHTLIGHRGEISN-AQFNFDCSFIVTGSMDKTCKIWDAGTGKCIGTLRGHDDEVLDVAFDYTGQLIATASADGTGRVYNALTHHCLSKLEGHEGEISKITFNAQGTRLLTASSDKTARLWDPNT----GKCLQVLEGH----TDEIFSCAFNYDGDIIITGSKDNTCRLW 414

HSP 4 Score: 53.9138 bits (128), Expect = 4.486e-8
Identity = 38/139 (27.34%), Postives = 64/139 (46.04%), Query Frame = 2 
Query:  707 DIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVD--GKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            D R   + +    H   +T+VA +  G   ++ S D T +VWDT     GE  T  + GH     KN++      +  G ++  GS DK   +W+  TG+  +   GH   +   AF+P   ++ + S DT   + ++Q
Sbjct:   78 DDRHFYLFKILRAHILPLTNVAFNKSGTSFITGSYDRTCKVWDT---ASGEE-TLTLEGH-----KNVVYAIAFNNPYGDKIATGSFDKTCKLWNAETGKCYHTYRGHSAEIVCLAFNPQSTVIATGSMDTTAKLWDVQ 207
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Medaka
Match: snrnp40 (small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:101156339])

HSP 1 Score: 374.015 bits (959), Expect = 1.122e-128
Identity = 169/332 (50.90%), Postives = 237/332 (71.39%), Query Frame = 2 
Query:  122 KRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            KR R ++V   + +   A   +  PRTS+L AP +L+SGH+GEV+C KF P G+ LAS+G DR I LWN +G+ ++ A L GH+GA+++L +++D   +++ASTDKTV IWD+  GER+K+ KGHTS VN+        +L C+GSDD  I+LWD R K   HT    + VL V ++   D I SGGI+N I  WD+R+ K+I    GH+DS+T +++S++G++LLSNS+DNT+R+WD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VY+WD  + +I+YKLPGH GSVNE  FHP EP++LS SSD +++MGEIQ
Sbjct:   19 KRARNELVAAAQSQQLVA---TGPPRTSSLQAPIMLMSGHEGEVYCCKFHPNGATLASSGFDRLIFLWNVFGECENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVGIWDSETGERIKRLKGHTSFVNTCYPARRGPQLVCTGSDDGTIKLWDIRKKAAIHTFQNTYQVLAVTFNDTSDQILSGGIDNDIKVWDLRQNKLIYNMHGHSDSVTGLSLSSEGSYLLSNSMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSTDGSKIAAGSADRFVYIWDTTSRRILYKLPGHAGSVNEVVFHPEEPVVLSGSSDKRLYMGEIQ 347

HSP 2 Score: 62.3882 bits (150), Expect = 2.029e-10
Identity = 60/321 (18.69%), Postives = 120/321 (37.38%), Query Frame = 2 
Query:  173 AGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDT-RVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEK--NLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            AGD++ IP T+   A N L++  + +       P  S L +                  + ++SGH G +   +F  +   + ++  D+ + +W+     E     KGH+                                           +V+++ Y+  G  +FS   +  +  WD    + I+   GHT  + +   +  G   + + S D T+++WD R               +H F+    +L   ++    ++  G  D ++ VWD+   +++Y + GH  SV   +       LLS S D  + + +++P 
Sbjct:    8 AGDMAVIP-TAVKRARNELVAAAQSQQLVATGPPRTSSLQAP-----------------IMLMSGHEGEVYCCKFHPNGATLASSGFDRLIFLWNVFGECENYATLKGHSG------------------------------------------AVMELHYNTDGSLLFSASTDKTVGIWDSETGERIKRLKGHTSFVNTCYPARRGPQLVCTGSDDGTIKLWDIRK-----------KAAIHTFQNTYQVLAVTFNDTSDQILSGGIDNDIKVWDLRQNKLIYNMHGHSDSVTGLSLSSEGSYLLSNSMDNTVRIWDVRPF 257
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Medaka
Match: snrnp40 (small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:101156339])

HSP 1 Score: 361.688 bits (927), Expect = 2.110e-123
Identity = 169/358 (47.21%), Postives = 238/358 (66.48%), Query Frame = 2 
Query:  122 KRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREI--------------------------ILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            KR R ++V   + +   A   +  PRTS+L AP +L+SGH+GEV+C KF P G+ LAS+G DR I                          +LWN +G+ ++ A L GH+GA+++L +++D   +++ASTDKTV IWD+  GER+K+ KGHTS VN+        +L C+GSDD  I+LWD R K   HT    + VL V ++   D I SGGI+N I  WD+R+ K+I    GH+DS+T +++S++G++LLSNS+DNT+R+WD RPF   ERC K+  G++HNFEKNLLRC+WS DG ++  GSAD+ VY+WD  + +I+YKLPGH GSVNE  FHP EP++LS SSD +++MGEIQ
Sbjct:   19 KRARNELVAAAQSQQLVA---TGPPRTSSLQAPIMLMSGHEGEVYCCKFHPNGATLASSGFDRLICKQKEASCRSPGLLLLLCSSLTSFTSVLWNVFGECENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVGIWDSETGERIKRLKGHTSFVNTCYPARRGPQLVCTGSDDGTIKLWDIRKKAAIHTFQNTYQVLAVTFNDTSDQILSGGIDNDIKVWDLRQNKLIYNMHGHSDSVTGLSLSSEGSYLLSNSMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSTDGSKIAAGSADRFVYIWDTTSRRILYKLPGHAGSVNEVVFHPEEPVVLSGSSDKRLYMGEIQ 373

HSP 2 Score: 59.6918 bits (143), Expect = 1.555e-9
Identity = 37/168 (22.02%), Postives = 75/168 (44.64%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDG-NFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEK--NLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            +V+++ Y+  G  +FS   +  +  WD    + I+   GHT  + +   +  G   + + S D T+++WD R               +H F+    +L   ++    ++  G  D ++ VWD+   +++Y + GH  SV   +       LLS S D  + + +++P 
Sbjct:  127 AVMELHYNTDGSLLFSASTDKTVGIWDSETGERIKRLKGHTSFVNTCYPARRGPQLVCTGSDDGTIKLWDIR-----------KKAAIHTFQNTYQVLAVTFNDTSDQILSGGIDNDIKVWDLRQNKLIYNMHGHSDSVTGLSLSSEGSYLLSNSMDNTVRIWDVRPF 283
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Medaka
Match: wdr5 (WD repeat domain 5 [Source:NCBI gene;Acc:101166483])

HSP 1 Score: 146.362 bits (368), Expect = 2.367e-40
Identity = 101/289 (34.95%), Postives = 156/289 (53.98%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDS-ITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDG-KRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            L+GH   V   KF+P G +LAS+  D+ I +W  Y D K    +SGH   I D+ +SSDS+ + +AS DKT+ IWD   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V ++  G  I S   + +   WD    + ++T     +  ++ V  S +G ++L+ ++DNTL++WD   + +G +C K   GH +  EK  +   +SV G K +  GS D  VY+W++ T +I+ KL GH   V  TA HP E I+ S +
Sbjct:   41 LAGHTKAVSSVKFSPSGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVNSGKCLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD---YSKG-KCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320

HSP 2 Score: 84.3445 bits (207), Expect = 8.767e-18
Identity = 55/209 (26.32%), Postives = 97/209 (46.41%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWD----KRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDN--TLRVWDT 838
            L GH   VFC  F P+ + + S   D  + +W+     K L  L  H+  +  + F+ D   I ++S D    IWDT  G+ +K      +   S    S   +   + + D  ++LWD    K +K  T   + K+ +        G +I SG  +N++  W+++  +I+Q   GHTD + S A     N + S +++N  T+++W +
Sbjct:  125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332

HSP 3 Score: 82.8037 bits (203), Expect = 2.933e-17
Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            +V  V +SP G+++ S   + +I  W   + K  +T +GH   I+ VA S+D N L+S S D TL++WD    V   +C K + GH  N+   +  C ++     +  GS D++V +WD+ TG+ +  LP H   V+   F+    +++S S D
Sbjct:   47 AVSSVKFSPSGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD----VNSGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192

HSP 4 Score: 60.077 bits (144), Expect = 1.029e-9
Identity = 36/128 (28.12%), Postives = 64/128 (50.00%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGHT +++SV  S  G +L S+S D  +++W         +  K + GH    +  +   AWS D   +   S DK + +WD+ +G+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   40 TLAGHTKAVSSVKFSPSGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KLGISDVAWSSDSNLLVSASDDKTLKIWDVNSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Medaka
Match: wdr5 (WD repeat domain 5 [Source:NCBI gene;Acc:101166483])

HSP 1 Score: 134.035 bits (336), Expect = 1.028e-35
Identity = 97/289 (33.56%), Postives = 150/289 (51.90%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDS-ITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDG-KRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVS 1084
            L+GH   V   KF+P G +LAS+  D+ I +W  Y D K    +SGH   I D+ +SSDS+ + +AS DKT+ IWD   G+ +K  KGH++ V   +  +    L  SGS D  +R+WD +      T+ A HS  V  V ++  G  I S   + +   WD    + ++T     +  ++ V  S +G ++L+ ++DN+   +    F    +C K   GH +  EK  +   +SV G K +  GS D  VY+W++ T +I+ KL GH   V  TA HP E I+ S +
Sbjct:   40 LAGHTKAVSSVKFSPSGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVNSGKCLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNSSLTF--VFFYVNSQCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 321

HSP 2 Score: 82.4185 bits (202), Expect = 3.514e-17
Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = 2 
Query:  629 SVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            +V  V +SP G+++ S   + +I  W   + K  +T +GH   I+ VA S+D N L+S S D TL++WD    V   +C K + GH  N+   +  C ++     +  GS D++V +WD+ TG+ +  LP H   V+   F+    +++S S D
Sbjct:   46 AVSSVKFSPSGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD----VNSGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 191

HSP 3 Score: 60.077 bits (144), Expect = 1.072e-9
Identity = 36/128 (28.12%), Postives = 64/128 (50.00%), Query Frame = 2 
Query:  734 TFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            T AGHT +++SV  S  G +L S+S D  +++W         +  K + GH    +  +   AWS D   +   S DK + +WD+ +G+ +  L GH   V    F+P   +++S S D  + + +++
Sbjct:   39 TLAGHTKAVSSVKFSPSGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KLGISDVAWSSDSNLLVSASDDKTLKIWDVNSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 158
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Medaka
Match: wdr83 (WD repeat domain 83 [Source:NCBI gene;Acc:101169657])

HSP 1 Score: 114.775 bits (286), Expect = 8.147e-29
Identity = 89/307 (28.99%), Postives = 137/307 (44.63%), Query Frame = 2 
Query:  194 PRTSNLLAPNLLL---SGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDY------IFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHL--HNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSV 1081
            PR      P  LL   +  +G V   +F  +G+++ S G D+ + LW+  G    L   SGH   +LD   S D+  I + S+DKTV++WD   G+  +K +GH   VN V   +    +  SGS D  +R WD R + +         +LD A             + +G ++  + ++D+R  ++   F      IT V  S DG   LS+S+D+ +R+ D        + T  M+G    H  +   L C  S     V   S D +VY WD+  G +  KL      V   +FHP E  LL+ 
Sbjct:    6 PRPQAPQLPQHLLRTINCQQGAVRAVRFNGDGNYILSCGSDKSLKLWSV-GRGTLLKTYSGHGYEVLDADSSFDNSQICSCSSDKTVILWDVATGQVTRKLRGHAGKVNCVQ-FNEEATVTLSGSIDGTVRCWDNRSRKSEPI-----QILDEARDGISSLKVVQHELLTGSVDGRVRRYDLRMGQLHVDFI--DSPITCVCFSQDGQCTLSSSLDSAVRLLD--------KSTGEMLGEYKGHKMKGYKLDCCLSNRDTHVLSCSEDGHVYCWDLVEGSLSLKLLVGTAVVQSLSFHPSETRLLTA 295

HSP 2 Score: 62.7734 bits (151), Expect = 1.370e-10
Identity = 39/125 (31.20%), Postives = 62/125 (49.60%), Query Frame = 2 
Query:  725 IIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
            +++T      ++ +V  + DGN++LS   D +L++W         R T L     H +E  +L    S D  ++   S+DK V +WD+ TGQ+  KL GH G VN   F+    + LS S D  +
Sbjct:   17 LLRTINCQQGAVRAVRFNGDGNYILSCGSDKSLKLWSV------GRGTLLKTYSGHGYE--VLDADSSFDNSQICSCSSDKTVILWDVATGQVTRKLRGHAGKVNCVQFNEEATVTLSGSIDGTV 133
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Planmine SMEST
Match: SMESG000045329.1 (SMESG000045329.1)

HSP 1 Score: 731.48 bits (1887), Expect = 0.000e+0
Identity = 351/353 (99.43%), Postives = 353/353 (100.00%), Query Frame = 2 
Query:   65 MSVKTITKRPIEYSHALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 1123
            MSVKTITKRPIEYSHALM+KRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWD+REMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI
Sbjct:    1 MSVKTITKRPIEYSHALMAKRPRTDVVVTERREFYSAGDISSIPRTSNLLAPNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDVREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQPI 353
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Planmine SMEST
Match: SMESG000024482.1 (SMESG000024482.1)

HSP 1 Score: 126.331 bits (316), Expect = 5.339e-32
Identity = 90/300 (30.00%), Postives = 135/300 (45.00%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVS-----------------------------------------AVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS-VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQI 1003
              GHK +V C  F P  S LAS G D  +++WN     +    + GH  AIL ++FS     + +AS DKTV +W   +      F+ HT+ V SV                                            S   +L  S SDD  I+LWD+  +   HT       V  +A+ P G YI SGG ++ +N WDIR  K++Q +  HT  + +V+    GNFL+S+S D++++++D    + G R    + GH    E  +L  A+S  G+    G AD  V++W    GQ+
Sbjct:   10 FKGHKDKVTCVDFNPNSSQLASGGIDSCLMIWNFKPQTRAYRFV-GHEDAILSVKFSPTGQLVASASRDKTVRLWVPSIKGESLVFRAHTATVRSVDISCDNLEMVTGSDDKTIKVWKMHRQKFSYSLNEHKNWVRCVRFSSDGQLIASSSDDKTIKLWDRHNQECIHTFQEHGGFVPSLAFHPNGSYIASGGTDSHVNIWDIRMNKLLQHYTSHTSPVNAVSFHPSGNFLISSSDDSSMKIYD---LLEG-RLLYTVQGH----EGPILGTAFSHCGEMFASGGADHQVFLWQ--AGQL 298

HSP 2 Score: 91.2781 bits (225), Expect = 7.011e-20
Identity = 65/258 (25.19%), Postives = 113/258 (43.80%), Query Frame = 2 
Query:  338 DIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAK-HSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKN---LLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
            D K      GH   +  + F+ +S  + +   D  +MIW+ +   R  +F GH   + SV   S T +L  S S D  +RLW   +K  +    A   +V  V  S     + +G  +  I  W +   K   +   H + +  V  S+DG  + S+S D T+++WD       + C       +H F+++   +   A+  +G  +  G  D +V +WD+   +++     H   VN  +FHP    L+S S D+ +
Sbjct:    3 DPKLQVHFKGHKDKVTCVDFNPNSSQLASGGIDSCLMIWNFKPQTRAYRFVGHEDAILSVK-FSPTGQLVASASRDKTVRLWVPSIKGESLVFRAHTATVRSVDISCDNLEMVTGSDDKTIKVWKMHRQKFSYSLNEHKNWVRCVRFSSDGQLIASSSDDKTIKLWDRH----NQEC-------IHTFQEHGGFVPSLAFHPNGSYIASGGTDSHVNIWDIRMNKLLQHYTSHTSPVNAVSFHPSGNFLISSSDDSSM 248

HSP 3 Score: 76.2554 bits (186), Expect = 7.574e-15
Identity = 54/215 (25.12%), Postives = 103/215 (47.91%), Query Frame = 2 
Query:  485 FKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHT-IDAKHSVLDVAYSPFGDYIFSGGIENVINQW--DIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCA-WSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            FKGH   V  V    ++ +L   G D C + +W+ + +   +  +  + ++L V +SP G  + S   +  +  W   I+   ++  F  HT ++ SV +S D   +++ S D T++VW         +  +    +  N  KN +RC  +S DG+ +   S DK + +WD +  + ++    H G V   AFHP+   + S  +D+ + + +I+
Sbjct:   10 FKGHKDKVTCVDFNPNSSQLASGGIDSC-LMIWNFKPQTRAYRFVGHEDAILSVKFSPTGQLVASASRDKTVRLWVPSIKGESLV--FRAHTATVRSVDISCDNLEMVTGSDDKTIKVW---------KMHRQKFSYSLNEHKNWVRCVRFSSDGQLIASSSDDKTIKLWDRHNQECIHTFQEHGGFVPSLAFHPNGSYIASGGTDSHVNIWDIR 212
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Planmine SMEST
Match: SMESG000008519.1 (SMESG000008519.1)

HSP 1 Score: 114.39 bits (285), Expect = 6.663e-29
Identity = 73/256 (28.52%), Postives = 120/256 (46.88%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQF--SSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREM-KIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVW 982
              GH  EV C +F P  + + + G D   +LW+     K ++ L GH   ++ LQF  + +   + T S D TV++WD   G RV +  GH + + S +  +       + S D  I++WD R+        A H+  VLDV +   G  + S G +N +  WD+++  K    F GH   ++ V  +  G  LLS S D + R W+T       +  +++ GH       +  CA++ DG ++  GS D    +W
Sbjct:   51 FKGHTAEVVCVQFNPSSTLVGTGGMDTLAMLWDVESG-KCVSNLQGHTAEVISLQFGQAHNGKHLITGSFDHTVILWDVHNGRRVSQLIGHDAEI-SAAVFNFDGTYVATASMDKSIKIWDLRMGARDLFTLAGHTDEVLDVTFDNVGKQVASAGADNTVRLWDVKDFSKPSFIFKGHEAEVSKVTFNPQGTVLLSASADKSARTWNTTT----GKVIQVLEGH----TDEIFSCAFNYDGSKIITGSKDNTCRIW 296

HSP 2 Score: 103.605 bits (257), Expect = 5.064e-25
Identity = 76/291 (26.12%), Postives = 130/291 (44.67%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKF-APEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVS-AVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPF-GDYIFSGGIENVINQWDIRE-MKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            L GHK  V+   +  P    + +   D+   +W+   D        GH   ++ +QF+  S  + T   D   M+WD   G+ V   +GHT+ V S+    +H  +   +GS D  + LWD         +    + +  A   F G Y+ +  ++  I  WD+R   + + T AGHTD +  V   N G  + S   DNT+R+WD + F    + + +  GH    E  + +  ++  G  +   SADK+   W+  TG+++  L GH   +   AF+     +++ S D
Sbjct:    8 LEGHKNVVYSIAYNLPFSDKIVTGSFDKTAKMWSA-NDGSLYHTFKGHTAEVVCVQFNPSSTLVGTGGMDTLAMLWDVESGKCVSNLQGHTAEVISLQFGQAHNGKHLITGSFDHTVILWDVHNGRRVSQLIGHDAEISAAVFNFDGTYVATASMDKSIKIWDLRMGARDLFTLAGHTDEVLDVTFDNVGKQVASAGADNTVRLWDVKDF---SKPSFIFKGH----EAEVSKVTFNPQGTVLLSASADKSARTWNTTTGKVIQVLEGHTDEIFSCAFNYDGSKIITGSKD 290

HSP 3 Score: 90.5077 bits (223), Expect = 2.633e-20
Identity = 71/254 (27.95%), Postives = 115/254 (45.28%), Query Frame = 2 
Query:  350 LAVLSGHNGAILDLQFSSD-SDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWD----KRVKNTT-HTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYT-GQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            L  L GH   +  + ++   SD I T S DKT  +W    G     FKGHT+ V  V   + +  L  +G  D    LWD    K V N   HT  A+   L    +  G ++ +G  ++ +  WD+   + +    GH   I++   + DG ++ + S+D ++++WD R    G R    + GH       +L   +   GK+V    AD  V +WD+    +  +   GH   V++  F+P   +LLS S+D
Sbjct:    5 LFTLEGHKNVVYSIAYNLPFSDKIVTGSFDKTAKMWSANDGSLYHTFKGHTAEVVCVQ-FNPSSTLVGTGGMDTLAMLWDVESGKCVSNLQGHT--AEVISLQFGQAHNGKHLITGSFDHTVILWDVHNGRRVSQLIGHDAEISAAVFNFDGTYVATASMDKSIKIWDLR---MGARDLFTLAGH----TDEVLDVTFDNVGKQVASAGADNTVRLWDVKDFSKPSFIFKGHEAEVSKVTFNPQGTVLLSASAD 248

HSP 4 Score: 74.3294 bits (181), Expect = 1.046e-14
Identity = 51/222 (22.97%), Postives = 106/222 (47.75%), Query Frame = 2 
Query:  464 VGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS-VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAV--SNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTG-QIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEIQ 1117
            +G  +   +GH ++V S++      +   +GS D   ++W     +  HT     + V+ V ++P    + +GG++ +   WD+   K +    GHT  + S+    +++G  L++ S D+T+ +WD      G R ++L +GH    +  +    ++ DG  V   S DK++ +WD+  G + ++ L GH   V +  F      + S  +D  + + +++
Sbjct:    1 MGTTLFTLEGHKNVVYSIAYNLPFSDKIVTGSFDKTAKMWSANDGSLYHTFKGHTAEVVCVQFNPSSTLVGTGGMDTLAMLWDVESGKCVSNLQGHTAEVISLQFGQAHNGKHLITGSFDHTVILWDVH---NGRRVSQL-IGH----DAEISAAVFNFDGTYVATASMDKSIKIWDLRMGARDLFTLAGHTDEVLDVTFDNVGKQVASAGADNTVRLWDVK 214

HSP 5 Score: 52.7582 bits (125), Expect = 1.657e-7
Identity = 30/79 (37.97%), Postives = 38/79 (48.10%), Query Frame = 2 
Query:  218 PNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIW 454
            P+ +  GH+ EV    F P+G+ L SA  D+    WNT    K + VL GH   I    F+ D   I T S D T  IW
Sbjct:  219 PSFIFKGHEAEVSKVTFNPQGTVLLSASADKSARTWNTTTG-KVIQVLEGHTDEIFSCAFNYDGSKIITGSKDNTCRIW 296
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Planmine SMEST
Match: SMESG000075662.1 (SMESG000075662.1)

HSP 1 Score: 110.153 bits (274), Expect = 2.084e-26
Identity = 83/296 (28.04%), Postives = 140/296 (47.30%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKFAPEGSFLASAGHDREIILWN-TYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTAST-DKTVMIWDTRVGERVKKFKGHTS-IVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGDYIFSGGIENVINQWDIR-EMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTR--PFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKI 1099
            L  H+ E+ C +F+P G FLA+ G DR+I +W+  YG       L+G NG+++ + F S   +I  AST D +  +W            GH++ +V       +TR    +GS D  ++LWD R ++   T+ A  +  DV        + SG  +  +  WD R ++   Q    H   IT + +S D N LL+   D++L+  D R   F++     +  VG+      +L R  +S DG+ V  GS D +V++W+  TG++   L      +    + P   +L S   + ++
Sbjct:  164 LDAHESEMGCVRFSPSGIFLATGGSDRKIKIWSHNYGACDYKTTLTGCNGSVIAVDFDSSESFILGASTLDSSCRLWSMGDYRMRLSLTGHSNKVVAGRFLADNTR--IVTGSTDRTLKLWDTRTRSCVKTMLAMSACHDVVVCSGLGLMISGHFDKKLRMWDHRGDLNTDQLVLSH--RITGLDISRDQNTLLACLKDDSLQTIDLRMNQFIQNFTAPQFKVGN------DLWRPCFSPDGQYVAAGSQDGSVFIWNSRTGKLEKTLKDQTAGIICVHWCPGSNVLASCERNKRV 449
[Close]
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Planmine SMEST
Match: SMESG000008519.1 (SMESG000008519.1)

HSP 1 Score: 101.293 bits (251), Expect = 9.220e-25
Identity = 67/206 (32.52%), Postives = 106/206 (51.46%), Query Frame = 2 
Query:  230 LSGHKGEVFCGKF--APEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGER-VKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVW 832
            L GH  EV   +F  A  G  L +   D  +ILW+ +   + ++ L GH+  I    F+ D  ++ TAS DK++ IWD R+G R +    GHT  V  V+  +  +++  +G+D+  +RLWD +  +    I   H   V  V ++P G  + S   +     W+    K+IQ   GHTD I S A + DG+ +++ S DNT R+W
Sbjct:   19 LQGHTAEVISLQFGQAHNGKHLITGSFDHTVILWDVHNG-RRVSQLIGHDAEISAAVFNFDGTYVATASMDKSIKIWDLRMGARDLFTLAGHTDEVLDVTFDNVGKQVASAGADNT-VRLWDVKDFSKPSFIFKGHEAEVSKVTFNPQGTVLLSASADKSARTWNTTTGKVIQVLEGHTDEIFSCAFNYDGSKIITGSKDNTCRIW 222

HSP 2 Score: 93.9745 bits (232), Expect = 4.170e-22
Identity = 65/231 (28.14%), Postives = 108/231 (46.75%), Query Frame = 2 
Query:  305 DREIILWNTYGDIKDLAVLSGHNGAILDLQF--SSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNSVSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHS--VLDVAYSPFGDYIFSGGIENVINQWDIREM-KIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVW 982
            D   +LW+     K ++ L GH   ++ LQF  + +   + T S D TV++WD   G RV +  GH + + S +  +       + S D  I++WD R+        A H+  VLDV +   G  + S G +N +  WD+++  K    F GH   ++ V  +  G  LLS S D + R W+T       +  +++ GH       +  CA++ DG ++  GS D    +W
Sbjct:    2 DTLAMLWDVESG-KCVSNLQGHTAEVISLQFGQAHNGKHLITGSFDHTVILWDVHNGRRVSQLIGHDAEI-SAAVFNFDGTYVATASMDKSIKIWDLRMGARDLFTLAGHTDEVLDVTFDNVGKQVASAGADNTVRLWDVKDFSKPSFIFKGHEAEVSKVTFNPQGTVLLSASADKSARTWNTTT----GKVIQVLEGH----TDEIFSCAFNYDGSKIITGSKDNTCRIW 222

HSP 3 Score: 88.1965 bits (217), Expect = 5.023e-20
Identity = 61/222 (27.48%), Postives = 103/222 (46.40%), Query Frame = 2 
Query:  434 DKTVMIWDTRVGERVKKFKGHTSIVNSVS-AVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPF-GDYIFSGGIENVINQWDIRE-MKIIQTFAGHTDSITSVAVSNDGNFLLSNSVDNTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSADKNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSD 1090
            D   M+WD   G+ V   +GHT+ V S+    +H  +   +GS D  + LWD         +    + +  A   F G Y+ +  ++  I  WD+R   + + T AGHTD +  V   N G  + S   DNT+R+WD + F    + + +  GH    E  + +  ++  G  +   SADK+   W+  TG+++  L GH   +   AF+     +++ S D
Sbjct:    2 DTLAMLWDVESGKCVSNLQGHTAEVISLQFGQAHNGKHLITGSFDHTVILWDVHNGRRVSQLIGHDAEISAAVFNFDGTYVATASMDKSIKIWDLRMGARDLFTLAGHTDEVLDVTFDNVGKQVASAGADNTVRLWDVKDF---SKPSFIFKGH----EAEVSKVTFNPQGTVLLSASADKSARTWNTTTGKVIQVLEGHTDEIFSCAFNYDGSKIITGSKD 216

HSP 4 Score: 52.7582 bits (125), Expect = 9.764e-8
Identity = 30/79 (37.97%), Postives = 38/79 (48.10%), Query Frame = 2 
Query:  218 PNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLSGHNGAILDLQFSSDSDWIYTASTDKTVMIW 454
            P+ +  GH+ EV    F P+G+ L SA  D+    WNT    K + VL GH   I    F+ D   I T S D T  IW
Sbjct:  145 PSFIFKGHEAEVSKVTFNPQGTVLLSASADKSARTWNTTTG-KVIQVLEGHTDEIFSCAFNYDGSKIITGSKDNTCRIW 222
The following BLAST results are available for this feature:
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
SNRNP401.633e-12854.55small nuclear ribonucleoprotein U5 subunit 40 [Sou... [more]
SNRNP402.089e-4362.00small nuclear ribonucleoprotein U5 subunit 40 [Sou... [more]
WDR51.773e-4233.74WD repeat domain 5 [Source:HGNC Symbol;Acc:HGNC:12... [more]
WDR5B1.990e-4234.95WD repeat domain 5B [Source:HGNC Symbol;Acc:HGNC:1... [more]
WDR837.731e-3230.69WD repeat domain 83 [Source:HGNC Symbol;Acc:HGNC:3... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
snrp-40.15.595e-10342.94Small Nuclear RibonucleoProtein homolog [Source:U... [more]
snrp-40.21.975e-10145.09Small Nuclear RibonucleoProtein homolog [Source:U... [more]
wdr-5.24.197e-3229.88WD repeat-containing protein wdr-5.2 [Source:UniP... [more]
wdr-5.11.961e-3030.20WD repeat-containing protein wdr-5.1 [Source:UniP... [more]
wdr-5.11.961e-3030.20WD repeat-containing protein wdr-5.1 [Source:UniP... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CG34367.245e-11946.96gene:FBgn0031229 transcript:FBtr0078119[more]
CG34367.245e-11946.96gene:FBgn0031229 transcript:FBtr0340650[more]
wds1.310e-3833.91gene:FBgn0040066 transcript:FBtr0308566[more]
wds1.310e-3833.91gene:FBgn0040066 transcript:FBtr0070438[more]
Lis-19.534e-2730.71gene:FBgn0015754 transcript:FBtr0087241[more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
snrnp401.125e-13353.01small nuclear ribonucleoprotein 40 (U5) [Source:ZF... [more]
wdr51.677e-4134.04WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-04042... [more]
wdr838.301e-3028.48WD repeat domain containing 83 [Source:NCBI gene;A... [more]
wdr838.386e-3028.48WD repeat domain containing 83 [Source:NCBI gene;A... [more]
poc1b1.496e-2726.01POC1 centriolar protein B [Source:NCBI gene;Acc:38... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
snrnp401.593e-13051.94small nuclear ribonucleoprotein, U5 40kDa subunit ... [more]
snrnp403.849e-12953.89small nuclear ribonucleoprotein, U5 40kDa subunit ... [more]
snrnp407.653e-12954.55small nuclear ribonucleoprotein, U5 40kDa subunit ... [more]
snrnp401.364e-12854.55small nuclear ribonucleoprotein, U5 40kDa subunit ... [more]
snrnp401.965e-12854.55small nuclear ribonucleoprotein, U5 40kDa subunit ... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Snrnp401.098e-12854.55small nuclear ribonucleoprotein 40 (U5) [Source:MG... [more]
Snrnp401.098e-12854.55small nuclear ribonucleoprotein 40 (U5) [Source:MG... [more]
Wdr5b7.962e-4333.75WD repeat domain 5B [Source:MGI Symbol;Acc:MGI:191... [more]
Wdr51.217e-4233.74WD repeat domain 5 [Source:MGI Symbol;Acc:MGI:2155... [more]
Wdr834.746e-3131.23WD repeat domain containing 83 [Source:MGI Symbol;... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q2HJH6|SNR40_BOVIN6.381e-12854.55U5 small nuclear ribonucleoprotein 40 kDa protein ... [more]
sp|Q6PE01|SNR40_MOUSE7.681e-12854.55U5 small nuclear ribonucleoprotein 40 kDa protein ... [more]
sp|Q96DI7|SNR40_HUMAN7.841e-12854.55U5 small nuclear ribonucleoprotein 40 kDa protein ... [more]
sp|Q5RF51|SNR40_PONAB2.800e-12653.90U5 small nuclear ribonucleoprotein 40 kDa protein ... [more]
sp|Q55AR8|SNR40_DICDI2.032e-10548.54U5 small nuclear ribonucleoprotein 40 kDa protein ... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
G4VPH07.837e-13955.62U5 snrnp-specific protein-related OS=Schistosoma m... [more]
A0A5J4NCD61.159e-13853.13Prp8 binding protein OS=Paragonimus westermani OX=... [more]
A0A4Z2DQ332.750e-13855.04U5 small nuclear ribonucleoprotein 40 kDa protein ... [more]
Q5DE693.899e-13855.04SJCHGC06272 protein OS=Schistosoma japonicum OX=61... [more]
C1L4J24.593e-13855.04WD repeat protein 57 OS=Schistosoma japonicum OX=6... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
snrnp409.963e-13452.85small nuclear ribonucleoprotein U5 subunit 40 [Sou... [more]
snrnp401.351e-12648.22small nuclear ribonucleoprotein U5 subunit 40 [Sou... [more]
wdr57.128e-4233.74WD repeat domain 5 [Source:NCBI gene;Acc:103033424... [more]
wdr58.754e-4033.54WD repeat domain 5 [Source:NCBI gene;Acc:103033424... [more]
ENSAMXT00000007963.23.076e-3933.74WD repeat-containing protein 5-like [Source:NCBI g... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
snrnp404.079e-12852.92small nuclear ribonucleoprotein 40 (U5) [Source:ZF... [more]
POC1A1.196e-2730.16POC1 centriolar protein A [Source:HGNC Symbol;Acc:... [more]
pafah1b1b1.596e-2627.88platelet-activating factor acetylhydrolase 1b, reg... [more]
taf5l1.102e-2430.73TAF5-like RNA polymerase II, p300/CBP-associated f... [more]
ENSPMAT00000008862.12.452e-2228.62pep scaffold:Pmarinus_7.0:GL476579:86637:114999:1 ... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5
Match NameE-valueIdentityDescription
RSA46.236e-2732.02WD-repeat protein involved in ribosome biogenesis;... [more]
TAF53.349e-2331.07Subunit (90 kDa) of TFIID and SAGA complexes; invo... [more]
PRP44.058e-2128.02Splicing factor; component of the U4/U6-U5 snRNP c... [more]
CDC405.789e-2025.52Pre-mRNA splicing factor; important for catalytic ... [more]
ASC16.084e-2024.10G-protein beta subunit and guanine dissociation in... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO463313.327e-11952.40Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO358213.556e-3832.88Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO332975.260e-3533.10Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO453466.646e-3330.94Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO348651.617e-2828.52Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
snrnp401.122e-12850.90small nuclear ribonucleoprotein U5 subunit 40 [Sou... [more]
snrnp402.110e-12347.21small nuclear ribonucleoprotein U5 subunit 40 [Sou... [more]
wdr52.367e-4034.95WD repeat domain 5 [Source:NCBI gene;Acc:101166483... [more]
wdr51.028e-3533.56WD repeat domain 5 [Source:NCBI gene;Acc:101166483... [more]
wdr838.147e-2928.99WD repeat domain 83 [Source:NCBI gene;Acc:10116965... [more]
back to top
BLAST of U5 small nuclear ribonucleoprotein 40 kDa protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000045329.10.000e+099.43SMESG000045329.1[more]
SMESG000024482.15.339e-3230.00SMESG000024482.1[more]
SMESG000008519.16.663e-2928.52SMESG000008519.1[more]
SMESG000075662.12.084e-2628.04SMESG000075662.1[more]
SMESG000008519.19.220e-2532.52SMESG000008519.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30001238 ID=SMED30001238|Name=U5 small nuclear ribonucleoprotein 40 kDa protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1149bp
TTTAATTTTTATCTATATAGAATATTTAATTTTAAAAGTCATTTTTAAAA
TAATAAATTAAAATATGAGTGTTAAGACTATAACGAAAAGACCAATTGAA
TATTCTCATGCCTTGATGTCTAAGAGACCAAGAACTGATGTTGTTGTTAC
TGAAAGACGAGAATTTTATTCTGCAGGCGATATTAGTAGTATTCCAAGAA
CTTCCAATTTATTAGCACCAAATTTACTTTTAAGTGGTCATAAAGGTGAA
GTATTTTGTGGAAAATTTGCTCCAGAAGGATCGTTTCTGGCGTCAGCTGG
TCATGACAGAGAGATTATTTTGTGGAACACCTATGGCGATATTAAAGATT
TAGCTGTTCTAAGTGGCCATAATGGTGCTATTTTGGATTTACAGTTTTCG
TCAGATTCTGATTGGATTTACACTGCAAGTACAGACAAAACCGTTATGAT
ATGGGATACAAGAGTTGGTGAGCGAGTCAAAAAATTTAAAGGTCACACTT
CTATTGTTAACAGTGTATCAGCAGTCAGTCATACAAGGGAATTGTTTTGT
TCGGGTTCTGATGATTGCAAAATTCGATTATGGGATAAAAGAGTCAAGAA
TACAACACACACAATTGATGCTAAACATTCGGTATTAGATGTTGCATATA
GTCCATTCGGTGATTATATATTCTCTGGGGGCATTGAGAACGTGATTAAT
CAGTGGGACATCCGTGAAATGAAAATTATTCAAACCTTTGCCGGCCACAC
TGACTCAATAACATCGGTTGCCGTTAGTAACGATGGCAATTTCCTACTTT
CTAACTCGGTGGATAATACCCTCAGGGTTTGGGATACCCGACCGTTCGTC
CGAGGGGAGCGCTGCACTAAGCTTATGGTGGGACATTTGCATAACTTTGA
GAAGAACTTGTTGCGGTGCGCCTGGTCTGTTGACGGCAAGCGTGTTACCT
GTGGCAGTGCTGACAAAAACGTTTACGTCTGGGACATGTACACTGGACAG
ATCATGTACAAATTGCCGGGACATGTCGGCAGCGTGAATGAAACTGCTTT
CCATCCCCATGAGCCGATTCTCTTATCAGTCAGCAGTGATACTAAAATAT
TCATGGGTGAAATCCAGCCTATTTGAATGTTTTTTGAATAAACCTTTTG
back to top

protein sequence of SMED30001238-orf-1

>SMED30001238-orf-1 ID=SMED30001238-orf-1|Name=SMED30001238-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=354bp
MSVKTITKRPIEYSHALMSKRPRTDVVVTERREFYSAGDISSIPRTSNLL
APNLLLSGHKGEVFCGKFAPEGSFLASAGHDREIILWNTYGDIKDLAVLS
GHNGAILDLQFSSDSDWIYTASTDKTVMIWDTRVGERVKKFKGHTSIVNS
VSAVSHTRELFCSGSDDCKIRLWDKRVKNTTHTIDAKHSVLDVAYSPFGD
YIFSGGIENVINQWDIREMKIIQTFAGHTDSITSVAVSNDGNFLLSNSVD
NTLRVWDTRPFVRGERCTKLMVGHLHNFEKNLLRCAWSVDGKRVTCGSAD
KNVYVWDMYTGQIMYKLPGHVGSVNETAFHPHEPILLSVSSDTKIFMGEI
QPI*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
GO:0005681spliceosomal complex
GO:0019013viral nucleocapsid
GO:0030529intracellular ribonucleoprotein complex
Vocabulary: biological process
TermDefinition
GO:0006397mRNA processing
GO:0008380RNA splicing
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 118..132
score: 37.32
coord: 244..258
score: 36.82
coord: 75..89
score: 32.59
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 134..174
e-value: 1.3E-6
score: 38.0
coord: 177..215
e-value: 0.027
score: 23.7
coord: 49..88
e-value: 4.5E-5
score: 32.8
coord: 218..257
e-value: 8.8E-11
score: 51.8
coord: 310..349
e-value: 0.16
score: 21.0
coord: 264..307
e-value: 0.0094
score: 25.1
coord: 92..131
e-value: 1.4E-9
score: 47.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 56..88
e-value: 5.9E-4
score: 20.6
coord: 182..215
e-value: 0.063
score: 14.2
coord: 96..131
e-value: 1.4E-8
score: 35.2
coord: 136..174
e-value: 1.9E-6
score: 28.5
coord: 221..257
e-value: 3.0E-8
score: 34.2
coord: 267..307
e-value: 4.4E-4
score: 21.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 56..88
score: 13.082
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 275..316
score: 9.807
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 141..183
score: 11.277
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 225..259
score: 15.956
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 99..140
score: 15.722
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 183..224
score: 9.506
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 52..351
e-value: 1.0E-104
score: 351.5
NoneNo IPR availablePANTHERPTHR44006:SF1U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEINcoord: 15..352
NoneNo IPR availablePANTHERPTHR44006FAMILY NOT NAMEDcoord: 15..352
NoneNo IPR availableCDDcd00200WD40coord: 56..345
e-value: 8.86509E-76
score: 233.381
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 75..89
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 118..132
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 56..353
score: 53.125
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 55..346