PKD1L-2

Overview


Name	PKD1L-2
Smed ID	SMED30001229
Length (bp)	353

Neoblast Clusters

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30001229

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
head region	SMED30001229	SMESG000014725.1 SMESG000014723.1	SmedASXL_014419	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
nervous system	SMED30001229	SMESG000014725.1 SMESG000014723.1	dd_Smed_v4_13975_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30001229	SMESG000014725.1 SMESG000014723.1	dd_Smed_v4_13975_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neuron	SMED30001229	SMESG000014725.1 SMESG000014723.1	dd_Smed_v4_13975_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neuron	SMED30001229	SMESG000014725.1 SMESG000014723.1	dd_Smed_v4_13975_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
dorsal-ventral axis of the whole animal	SMED30001229	SMESG000014725.1 SMESG000014723.1	dd_Smed_v4_13975_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30001229	SMESG000014725.1 SMESG000014723.1	dd_Smed_v4_13975_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
head region	SMED30001229	SMESG000014725.1 SMESG000014723.1	dd_Smed_v6_13975_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017
neuron	SMED30001229	SMESG000014725.1 SMESG000014723.1	dd_Smed_v6_13975_0_1	dd_Smed_v6	PMID:30399335 Ross et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of PKD1L-2 vs. Ensembl Human
Match: THBS1 (thrombospondin 1 [Source:HGNC Symbol;Acc:HGNC:11785])

HSP 1 Score: 48.521 bits (114), Expect = 4.811e-7
Identity = 31/92 (33.70%), Postives = 46/92 (50.00%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNV--PLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P+P   G+ C G + +T++C     P+N           +           G+ +RSRLCNNP P   G+DC G  T+ Q C
Sbjct:  455 VITRIRLCNSPSPQMNGKPCEGEARETKACKKDACPIN-----GGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQIC 541

[Close]

BLAST of PKD1L-2 vs. Ensembl Human
Match: UNC5B (unc-5 netrin receptor B [Source:HGNC Symbol;Acc:HGNC:12568])

HSP 1 Score: 47.7506 bits (112), Expect = 8.324e-7
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            +R+R C NPAP N G  C G +    +CT +   CPV+G+W+ WS WS+CS  C       RSR C  P P N G+DCSG   D+++CT
Sbjct:  268 KRTRTCTNPAPLNGGAFCEGQAFQKTACTTI---CPVDGAWTEWSKWSACSTECAH----WRSRECMAPPPQNGGRDCSGTLLDSKNCT 349

[Close]

BLAST of PKD1L-2 vs. Ensembl Human
Match: UNC5B (unc-5 netrin receptor B [Source:HGNC Symbol;Acc:HGNC:12568])

HSP 1 Score: 47.7506 bits (112), Expect = 8.331e-7
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            +R+R C NPAP N G  C G +    +CT +   CPV+G+W+ WS WS+CS  C       RSR C  P P N G+DCSG   D+++CT
Sbjct:  268 KRTRTCTNPAPLNGGAFCEGQAFQKTACTTI---CPVDGAWTEWSKWSACSTECAH----WRSRECMAPPPQNGGRDCSGTLLDSKNCT 349

[Close]

BLAST of PKD1L-2 vs. Ensembl Human
Match: SEMA5A (semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736])

HSP 1 Score: 47.7506 bits (112), Expect = 8.815e-7
Identity = 42/90 (46.67%), Postives = 52/90 (57.78%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            I  R R+CNNP P   G  C G S + Q C  +P  CPV+G WS WS W+ CS +CG    M R+R C+NPAP+  G  C GL T+   C
Sbjct:  804 IRNRKRVCNNPEPKYGGMPCLGPSLEYQECNILP--CPVDGVWSCWSPWTKCSATCGGGHYM-RTRSCSNPAPAYGGDICLGLHTEEALC 890

[Close]

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            I  R R+CNNP P   G  C G S + Q C  +P  CPV+G WS WS W+ CS +CG    M R+R C+NPAP+  G  C GL T+   C
Sbjct:  804 IRNRKRVCNNPEPKYGGMPCLGPSLEYQECNILP--CPVDGVWSCWSPWTKCSATCGGGHYM-RTRSCSNPAPAYGGDICLGLHTEEALC 890

[Close]

BLAST of PKD1L-2 vs. Ensembl Zebrafish
Match: thbs1a (thrombospondin 1a [Source:ZFIN;Acc:ZDB-GENE-120402-2])

HSP 1 Score: 50.0618 bits (118), Expect = 8.756e-8
Identity = 31/90 (34.44%), Postives = 44/90 (48.89%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P P   G+DC+G   +T+ C   P  CP         +           G+ +R RLCN+PAP   G+DC G S   + C
Sbjct:   40 VITRIRLCNSPTPQMGGRDCAGEGRETEPCQQDP--CP-VNGGWGPWSLWDSCSVSCGGGLQRRHRLCNSPAPKYGGKDCVGDSKAARMC 126

[Close]

BLAST of PKD1L-2 vs. Ensembl Zebrafish
Match: thbs1a (thrombospondin 1a [Source:ZFIN;Acc:ZDB-GENE-120402-2])

HSP 1 Score: 49.6766 bits (117), Expect = 9.411e-8
Identity = 31/90 (34.44%), Postives = 44/90 (48.89%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P P   G+DC+G   +T+ C   P  CP         +           G+ +R RLCN+PAP   G+DC G S   + C
Sbjct:   40 VITRIRLCNSPTPQMGGRDCAGEGRETEPCQQDP--CP-VNGGWGPWSLWDSCSVSCGGGLQRRHRLCNSPAPKYGGKDCVGDSKAARMC 126

[Close]

BLAST of PKD1L-2 vs. Ensembl Zebrafish
Match: thbs1b (thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1])

HSP 1 Score: 48.9062 bits (115), Expect = 2.201e-7
Identity = 30/90 (33.33%), Postives = 42/90 (46.67%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P P   G+DC G    T+ C   P  CP         +           G+  R RLCNNP P + G++C G +  +Q C
Sbjct:  455 VITRIRLCNSPTPQMDGKDCQGEGRQTERCEKSP--CP-INGGWGPWSPWDTCSVTCGGGVQNRKRLCNNPVPKHGGKECVGDAKVSQIC 541

[Close]

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P P   G+DC G    T+ C   P  CP         +           G+  R RLCNNP P + G++C G +  +Q C
Sbjct:  455 VITRIRLCNSPTPQMDGKDCQGEGRQTERCEKSP--CP-INGGWGPWSPWDTCSVTCGGGVQNRKRLCNNPVPKHGGKECVGDAKVSQIC 541

[Close]

BLAST of PKD1L-2 vs. Ensembl Zebrafish
Match: thbs1b (thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1])

HSP 1 Score: 48.9062 bits (115), Expect = 2.266e-7
Identity = 30/90 (33.33%), Postives = 42/90 (46.67%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P P   G+DC G    T+ C   P  CP         +           G+  R RLCNNP P + G++C G +  +Q C
Sbjct:  456 VITRIRLCNSPTPQMDGKDCQGEGRQTERCEKSP--CP-INGGWGPWSPWDTCSVTCGGGVQNRKRLCNNPVPKHGGKECVGDAKVSQIC 542

[Close]

BLAST of PKD1L-2 vs. Ensembl Xenopus
Match: THBS2 (thrombospondin 2 [Source:NCBI gene;Acc:100494997])

HSP 1 Score: 52.373 bits (124), Expect = 1.813e-8
Identity = 30/89 (33.71%), Postives = 44/89 (49.44%), Query Frame = 3

Query:   84 MQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            + R RLCN+P P   G++C+G   +T+ C  +PLN           +  S        G+ +RSRLCNNP P   G+ C G   + + C
Sbjct:  422 ITRIRLCNSPKPQLGGKNCTGAGRETKQCEGIPLN-----GKWGPWSPWSSCTVTCGGGLRERSRLCNNPKPQYGGKKCGGEPKEKEMC 505

[Close]

BLAST of PKD1L-2 vs. Ensembl Xenopus
Match: THBS2 (thrombospondin 2 [Source:NCBI gene;Acc:100494997])

HSP 1 Score: 49.6766 bits (117), Expect = 1.423e-7
Identity = 30/89 (33.71%), Postives = 44/89 (49.44%), Query Frame = 3

Query:   84 MQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            + R RLCN+P P   G++C+G   +T+ C  +P  CP         +  S        G+ +RSRLCNNP P   G+ C G   + + C
Sbjct:  324 ITRIRLCNSPKPQLGGKNCTGAGRETKQCEGIP--CP-INGKWGPWSPWSSCTVTCGGGLRERSRLCNNPKPQYGGKKCGGEPKEKEMC 409

[Close]

BLAST of PKD1L-2 vs. Ensembl Xenopus
Match: THBS2 (thrombospondin 2 [Source:NCBI gene;Acc:100494997])

HSP 1 Score: 49.6766 bits (117), Expect = 1.624e-7
Identity = 30/89 (33.71%), Postives = 44/89 (49.44%), Query Frame = 3

Query:   84 MQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            + R RLCN+P P   G++C+G   +T+ C  +P  CP         +  S        G+ +RSRLCNNP P   G+ C G   + + C
Sbjct:  454 ITRIRLCNSPKPQLGGKNCTGAGRETKQCEGIP--CP-INGKWGPWSPWSSCTVTCGGGLRERSRLCNNPKPQYGGKKCGGEPKEKEMC 539

[Close]

BLAST of PKD1L-2 vs. Ensembl Xenopus
Match: THBS2 (thrombospondin 2 [Source:NCBI gene;Acc:100494997])

HSP 1 Score: 49.2914 bits (116), Expect = 1.774e-7
Identity = 30/89 (33.71%), Postives = 44/89 (49.44%), Query Frame = 3

Query:   84 MQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            + R RLCN+P P   G++C+G   +T+ C  +P  CP         +  S        G+ +RSRLCNNP P   G+ C G   + + C
Sbjct:  469 ITRIRLCNSPKPQLGGKNCTGAGRETKQCEGIP--CP-INGKWGPWSPWSSCTVTCGGGLRERSRLCNNPKPQYGGKKCGGEPKEKEMC 554

[Close]

BLAST of PKD1L-2 vs. Ensembl Xenopus
Match: THBS2 (thrombospondin 2 [Source:NCBI gene;Acc:100494997])

HSP 1 Score: 49.2914 bits (116), Expect = 1.781e-7
Identity = 30/89 (33.71%), Postives = 44/89 (49.44%), Query Frame = 3

Query:   84 MQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            + R RLCN+P P   G++C+G   +T+ C  +P  CP         +  S        G+ +RSRLCNNP P   G+ C G   + + C
Sbjct:  362 ITRIRLCNSPKPQLGGKNCTGAGRETKQCEGIP--CP-INGKWGPWSPWSSCTVTCGGGLRERSRLCNNPKPQYGGKKCGGEPKEKEMC 447

[Close]

BLAST of PKD1L-2 vs. Ensembl Mouse
Match: Thbs1 (thrombospondin 1 [Source:MGI Symbol;Acc:MGI:98737])

HSP 1 Score: 48.1358 bits (113), Expect = 3.400e-7
Identity = 31/92 (33.70%), Postives = 46/92 (50.00%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNV--PLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P+P   G+ C G + +T++C     P+N           +           G+ +RSRLCNNP P   G+DC G  T+ Q C
Sbjct:  456 VITRIRLCNSPSPQMNGKPCEGEARETKACKKDACPIN-----GGWGPWSPWDICSVTCGGGVQRRSRLCNNPTPQFGGKDCVGDVTENQVC 542

[Close]

BLAST of PKD1L-2 vs. Ensembl Mouse
Match: Thbs2 (thrombospondin 2 [Source:MGI Symbol;Acc:MGI:98738])

HSP 1 Score: 48.1358 bits (113), Expect = 3.639e-7
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 3

Query:   84 MQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            + R RLCN+P P   G++C G   +T+ C   P  CP++G WS WS WS+C+V+C    I +RSR+CN+P P   G+DC G  T+ Q C
Sbjct:  458 VTRIRLCNSPVPQMGGKNCKGSGRETKPCQRDP--CPIDGRWSPWSPWSACTVTCAGG-IRERSRVCNSPEPQYGGKDCVGDVTEHQMC 543

[Close]

BLAST of PKD1L-2 vs. Ensembl Mouse
Match: Unc5b (unc-5 netrin receptor B [Source:MGI Symbol;Acc:MGI:894703])

HSP 1 Score: 48.1358 bits (113), Expect = 3.804e-7
Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            +R+R C NPAP N G  C G +    +CT V   CPV+G+W+ WS WS+CS  C       RSR C  P P N G+DCSG   D+++CT
Sbjct:  268 KRTRTCTNPAPLNGGAFCEGQAFQKTACTTV---CPVDGAWTEWSKWSACSTECAH----WRSRECMAPPPQNGGRDCSGTLLDSKNCT 349

[Close]

BLAST of PKD1L-2 vs. Ensembl Mouse
Match: Unc5b (unc-5 netrin receptor B [Source:MGI Symbol;Acc:MGI:894703])

HSP 1 Score: 48.1358 bits (113), Expect = 4.195e-7
Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            +R+R C NPAP N G  C G +    +CT V   CPV+G+W+ WS WS+CS  C       RSR C  P P N G+DCSG   D+++CT
Sbjct:  268 KRTRTCTNPAPLNGGAFCEGQAFQKTACTTV---CPVDGAWTEWSKWSACSTECAH----WRSRECMAPPPQNGGRDCSGTLLDSKNCT 349

[Close]

BLAST of PKD1L-2 vs. Ensembl Mouse
Match: Unc5c (unc-5 netrin receptor C [Source:MGI Symbol;Acc:MGI:1095412])

HSP 1 Score: 48.1358 bits (113), Expect = 4.379e-7
Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            +R+R C NPAP N G  C G S    +CT +   CPV+G W+SWS WS+C   C       R R C  PAP N G+DC GL   +++CT
Sbjct:  208 KRTRTCTNPAPLNGGAFCEGQSVQKIACTTL---CPVDGRWTSWSKWSTCGTECTH----WRRRECTAPAPKNGGKDCDGLVLQSKNCT 289

[Close]

BLAST of PKD1L-2 vs. UniProt/SwissProt
Match: sp|C5IAW9|UN5BB_XENLA (Netrin receptor UNC5B-b OS=Xenopus laevis OX=8355 GN=unc5b-b PE=1 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 1.624e-6
Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            +R+R C NPAP N G  C G      +C  +   CPV+G W+ WS WS+CS  C       RSR CN P P N G+DCSG+  D+++CT
Sbjct:  271 KRTRTCTNPAPLNGGTMCEGQQYQKFACNTM---CPVDGGWTEWSKWSACSTECTH----WRSRECNAPTPKNGGKDCSGMLLDSKNCT 352

[Close]

BLAST of PKD1L-2 vs. UniProt/SwissProt
Match: sp|Q8JGT4|UN5BA_XENLA (Netrin receptor UNC5B-a OS=Xenopus laevis OX=8355 GN=unc5b-a PE=2 SV=1)

HSP 1 Score: 48.521 bits (114), Expect = 1.722e-6
Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            +R+R C NPAP N G  C G      +C  +   CPV+G W+ WS WS+CS  C       RSR CN P P N G+DCSG+  D+++CT
Sbjct:  271 KRTRTCTNPAPLNGGTMCEGQQYQKFACNTM---CPVDGGWTEWSKWSACSTECTH----WRSRECNAPTPKNGGKDCSGMLLDSKNCT 352

[Close]

BLAST of PKD1L-2 vs. UniProt/SwissProt
Match: sp|Q28178|TSP1_BOVIN (Thrombospondin-1 OS=Bos taurus OX=9913 GN=THBS1 PE=2 SV=2)

HSP 1 Score: 48.521 bits (114), Expect = 2.180e-6
Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P+P   G+ C G + +T++C     +CP+NG W  WS W  CSV+CG   + +RSRLCNNP P   G+DC G  T+ Q C
Sbjct:  455 VITRIRLCNSPSPQMNGKPCEGKARETKACQKD--SCPINGGWGPWSPWDICSVTCGGG-VQKRSRLCNNPKPQFGGKDCVGDVTENQIC 541

[Close]

BLAST of PKD1L-2 vs. UniProt/SwissProt
Match: sp|P07996|TSP1_HUMAN (Thrombospondin-1 OS=Homo sapiens OX=9606 GN=THBS1 PE=1 SV=2)

HSP 1 Score: 48.521 bits (114), Expect = 2.310e-6
Identity = 31/92 (33.70%), Postives = 46/92 (50.00%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNV--PLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P+P   G+ C G + +T++C     P+N           +           G+ +RSRLCNNP P   G+DC G  T+ Q C
Sbjct:  455 VITRIRLCNSPSPQMNGKPCEGEARETKACKKDACPIN-----GGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQIC 541

[Close]

BLAST of PKD1L-2 vs. UniProt/SwissProt
Match: sp|P35441|TSP1_MOUSE (Thrombospondin-1 OS=Mus musculus OX=10090 GN=Thbs1 PE=1 SV=1)

HSP 1 Score: 48.521 bits (114), Expect = 2.333e-6
Identity = 31/92 (33.70%), Postives = 46/92 (50.00%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNV--PLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P+P   G+ C G + +T++C     P+N           +           G+ +RSRLCNNP P   G+DC G  T+ Q C
Sbjct:  455 VITRIRLCNSPSPQMNGKPCEGEARETKACKKDACPIN-----GGWGPWSPWDICSVTCGGGVQRRSRLCNNPTPQFGGKDCVGDVTENQVC 541

[Close]

BLAST of PKD1L-2 vs. TrEMBL
Match: A0A0H3YFF8 (PKD1L-2 OS=Schmidtea mediterranea OX=79327 GN=PKD1L-2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.532e-18
Identity = 65/81 (80.25%), Postives = 68/81 (83.95%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCS 323
            IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPVNG WSSWSTWSSCS SCG      R+R C+NP+P N G  CS
Sbjct:  276 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPVNGMWSSWSTWSSCSSSCGFGT-RSRTRNCDNPSPLNGGLGCS 355

HSP 2 Score: 77.411 bits (189), Expect = 5.141e-14
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 3

Query:   90 RSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            RSR+C +   SN+G  C G   DTQ+C N  L CP+NG+WSSW+TWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT
Sbjct:  222 RSRVCIDS--SNSGLPCPGTDKDTQACGNSTL-CPINGNWSSWNTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 306

[Close]

BLAST of PKD1L-2 vs. TrEMBL
Match: A7SKI9 (Predicted protein (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g121678 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 6.784e-10
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            IM R+R C+NP P++ G++C G + +T++C   P  CPVNG WS +S WSSC+ SCG   IM R+R C NP P+N GQ+C G  T+T++C
Sbjct:   21 IMSRTRTCSNPKPAHGGKECEGDAKETKACGISP--CPVNGGWSDFSKWSSCTKSCGGG-IMSRTRTCTNPKPANGGQECKGDETETKAC 107

[Close]

BLAST of PKD1L-2 vs. TrEMBL
Match: A0A3M6UFN0 (Uncharacterized protein OS=Pocillopora damicornis OX=46731 GN=pdam_00013779 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.041e-9
Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 3

Query:   90 RSRLCNNPAPSNAGQDCSGLSTD--TQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            R RLCNNP P + G+DCSGL  D  T+SCT     CPV+G W  WS WS CSV+CG   ++ R R CNNP P+  G+DC G   +T+ C
Sbjct: 2556 RDRLCNNPEPKDGGKDCSGLGKDSETKSCTPPIKKCPVDGGWGDWSDWSKCSVTCGGGELI-RERKCNNPKPAADGKDCEGDEAETKEC 2643

HSP 2 Score: 55.4546 bits (132), Expect = 2.487e-6
Identity = 35/88 (39.77%), Postives = 43/88 (48.86%), Query Frame = 3

Query:   90 RSRLCNNPAPSNAGQDCSGL--STDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQS 347
            R R C NP PS  G+DCSGL  S  ++ C+N   NCP      +     S        GI QR R C NP P + G+DCS L    Q+
Sbjct: 2406 RERTCTNPPPSAGGKDCSGLGPSKSSRECSN--QNCP-IDGGYTNWNGWSKCSVSCGGGIRQRDRQCTNPKPQHGGKDCSELGPIRQT 2490

[Close]

BLAST of PKD1L-2 vs. TrEMBL
Match: A0A3M6U2W8 (Uncharacterized protein OS=Pocillopora damicornis OX=46731 GN=pdam_00010651 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 8.967e-9
Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            I  R R C NP P N G+DCSG   D Q C      CPVNGSW+ WS W SCS++CG  GI +R R C NP P+N G +C G   +T++C
Sbjct:  243 IQGRRRYCINPPPKNGGRDCSGKGYDVQRCNT--QGCPVNGSWTEWSDWGSCSLTCGDGGIKKRIRTCTNPPPANGGLECEGAGEETEAC 330

HSP 2 Score: 54.6842 bits (130), Expect = 3.679e-6
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            I +R R C NP P+N G +C G   +T++C      CPV+G W  WS W  CS SCG+  I  R R C+NP P++ G+ C G ST+T++C+
Sbjct:  301 IKKRIRTCTNPPPANGGLECEGAGEETEACK--AGECPVDGKWGEWSDWGVCSRSCGTG-IQSRFRDCDNPPPAHGGKQCPGSSTETRNCS 388

[Close]

BLAST of PKD1L-2 vs. TrEMBL
Match: A0A2B4STD3 (Plasma kallikrein OS=Stylophora pistillata OX=50429 GN=Klkb1 PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.393e-8
Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 3

Query:   90 RSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            RSR C+NPAP N G+ C+G ST++Q+C  +P   P            +        G M RSR C+NPAP N G+ C G S++T  C
Sbjct:  185 RSRTCSNPAPKNGGRACAGSSTESQACNTLPCKVP-VDGKWGVWGKWTTCSKTCGGGYMSRSRTCSNPAPQNGGRPCQGPSSETARC 270

HSP 2 Score: 57.3806 bits (137), Expect = 4.574e-7
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 3

Query:   84 MQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            M R R C+NPAP N G+ C+G S +   C   P   P+NG+W +W  WS+C+ +CG      RSR C+NPAP N G+ C+G ST++Q+C
Sbjct:  124 MSRRRTCSNPAPRNGGRTCTGASVNYYQCNRTPCKVPINGNWGAWRQWSTCTKTCGGGE-KSRSRTCSNPAPKNGGRACAGSSTESQAC 211

[Close]

BLAST of PKD1L-2 vs. Ensembl Cavefish
Match: thbs1b (thrombospondin-1-like [Source:NCBI gene;Acc:103031445])

HSP 1 Score: 52.373 bits (124), Expect = 9.794e-9
Identity = 42/90 (46.67%), Postives = 53/90 (58.89%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P P   G+DC G    T+ C   P  CP+NG W  WS W  CS++CG      R RLCN+PAP   G+DC G +T TQ C
Sbjct:  463 VITRIRLCNSPTPQMGGKDCQGQGRQTEKCEKSP--CPINGGWGPWSPWDKCSLTCGGGT-QSRKRLCNDPAPKYGGKDCVGDATATQIC 549

[Close]

BLAST of PKD1L-2 vs. Ensembl Cavefish
Match: ENSAMXT00000044661.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001762.1:6524:8010:-1 gene:ENSAMXG00000044078.1 transcript:ENSAMXT00000044661.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 51.2174 bits (121), Expect = 2.096e-8
Identity = 29/89 (32.58%), Postives = 42/89 (47.19%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            QR+RLC +PAP + G+ C G        +N P   P         +         + G M+R R C NP P+N G+ C+G  T+ Q C+
Sbjct:  122 QRTRLCASPAPQHGGRQCEGNDIHIDF-SNYPFTAPTVNGNWGPWSSWGSCSRTCNGGQMRRYRTCENPRPANGGRACAGADTEIQKCS 209

HSP 2 Score: 48.9062 bits (115), Expect = 1.396e-7
Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 3

Query:   84 MQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            M+R R C NP P+N G+ C+G  T+ Q C+    +CPV+G+W  W  W  CS SCGS    +R R+CN+P+PSN G+ C G ST    C
Sbjct:  180 MRRYRTCENPRPANGGRACAGADTEIQKCSTE--SCPVDGNWGLWQPWGECSASCGSGE-QKRVRICNSPSPSNKGRPCPGDSTQLSKC 265

[Close]

BLAST of PKD1L-2 vs. Ensembl Cavefish
Match: unc5da (unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2])

HSP 1 Score: 48.9062 bits (115), Expect = 1.493e-7
Identity = 41/91 (45.05%), Postives = 53/91 (58.24%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            I +RSR C NPAP N G  C G+S    +CT+    CPV+G WS W+ WS CS  C      QR R C +P P + G+ C G + DT++CT
Sbjct:  245 IQRRSRTCTNPAPLNGGAFCEGMSVQKSTCTS---PCPVDGGWSGWTEWSVCSSECER----QRGRECTDPEPKHGGRLCDGAALDTENCT 328

[Close]

BLAST of PKD1L-2 vs. Ensembl Cavefish
Match: unc5da (unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2])

HSP 1 Score: 48.9062 bits (115), Expect = 1.523e-7
Identity = 41/91 (45.05%), Postives = 53/91 (58.24%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            I +RSR C NPAP N G  C G+S    +CT+    CPV+G WS W+ WS CS  C      QR R C +P P + G+ C G + DT++CT
Sbjct:  245 IQRRSRTCTNPAPLNGGAFCEGMSVQKSTCTS---PCPVDGGWSGWTEWSVCSSECER----QRGRECTDPEPKHGGRLCDGAALDTENCT 328

[Close]

BLAST of PKD1L-2 vs. Ensembl Cavefish
Match: unc5a (unc-5 netrin receptor A [Source:ZFIN;Acc:ZDB-GENE-080219-19])

HSP 1 Score: 47.7506 bits (112), Expect = 4.165e-7
Identity = 42/89 (47.19%), Postives = 49/89 (55.06%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            +RSR C NPAP N G  C G S  T +CT     CPV+G WS WS WS+C   C     M RSR C  PAP   G+ C GL   + +CT
Sbjct:  262 KRSRSCTNPAPLNGGTACEGQSVQTSACTA---TCPVDGGWSEWSKWSACGTDCT----MWRSRECTQPAPGTGGKSCQGLDLQSLNCT 343

[Close]

BLAST of PKD1L-2 vs. Ensembl Sea Lamprey
Match: thbs1a (thrombospondin 1a [Source:ZFIN;Acc:ZDB-GENE-120402-2])

HSP 1 Score: 46.2098 bits (108), Expect = 2.552e-7
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 3

Query:   90 RSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            R RLCN+P P   G +C G   + Q C   P  CPV+G +  WS WS+C V+CG   + +R+RLCNNP P   G+DC G   +T+ C
Sbjct:  454 RIRLCNSPVPQMGGDECDGSGRENQKCEMEP--CPVDGQYGPWSPWSACPVTCGGA-LRERARLCNNPKPQYNGKDCLGSDRETEIC 537

[Close]

BLAST of PKD1L-2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000917.1 (pep scaffold:Pmarinus_7.0:GL477542:941:92377:1 gene:ENSPMAG00000000814.1 transcript:ENSPMAT00000000917.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 45.0542 bits (105), Expect = 8.396e-7
Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            + +R R C  P P+  G+DC G  ++ + C      C  +G+WS WS W+ CS SCG  G+  R+R C+ PAP   G  C G   DTQ C
Sbjct:  963 VQRRYRFCTEPPPAGEGRDCGGPGSEERVCNT--HACTQDGAWSGWSRWAECSRSCGGGGLRSRARACDAPAPGGGGDYCEGPGVDTQEC 1050

[Close]

BLAST of PKD1L-2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000925.1 (pep scaffold:Pmarinus_7.0:GL477542:4188:92377:1 gene:ENSPMAG00000000814.1 transcript:ENSPMAT00000000925.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 44.669 bits (104), Expect = 1.078e-6
Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            + +R R C  P P+  G+DC G  ++ + C      C  +G+WS WS W+ CS SCG  G+  R+R C+ PAP   G  C G   DTQ C
Sbjct:  800 VQRRYRFCTEPPPAGEGRDCGGPGSEERVCNT--HACTQDGAWSGWSRWAECSRSCGGGGLRSRARACDAPAPGGGGDYCEGPGVDTQEC 887

[Close]

BLAST of PKD1L-2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008404.1 (pep scaffold:Pmarinus_7.0:GL476608:255441:311832:-1 gene:ENSPMAG00000007555.1 transcript:ENSPMAT00000008404.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 44.2838 bits (103), Expect = 1.367e-6
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            +R+R C NPAP N G  C+G  T    C+ +   CPV+G W  WS WS+C   C       RSR C+NPAP N G+DC G    +Q+C+
Sbjct:  231 KRTRSCTNPAPLNGGAVCNGQGTQKIPCSTI---CPVDGGWVEWSKWSTCGPDCTH----WRSRECSNPAPVNGGKDCHGSPLQSQNCS 312

[Close]

BLAST of PKD1L-2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003861.1 (pep scaffold:Pmarinus_7.0:GL476449:2630:55902:-1 gene:ENSPMAG00000003466.1 transcript:ENSPMAT00000003861.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 43.5134 bits (101), Expect = 2.222e-6
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 3

Query:   87 QRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            +R R C NPAP N G  C G +++   CT+    CPV+G W  WS WS+C   C       RSR C+NPAP N G+DC G    +Q+C+
Sbjct:  257 KRIRTCTNPAPLNGGPFCDGQASENTPCTSA---CPVDGGWVEWSKWSTCGPDCTH----WRSRECSNPAPVNGGKDCHGSPLQSQNCS 338

[Close]

BLAST of PKD1L-2 vs. Ensembl Nematostella
Match: EDO35765 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKI9])

HSP 1 Score: 62.003 bits (149), Expect = 9.382e-14
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            IM R+R C+NP P++ G++C G + +T++C   P  CPVNG WS +S WSSC+ SCG   IM R+R C NP P+N GQ+C G  T+T++C
Sbjct:   21 IMSRTRTCSNPKPAHGGKECEGDAKETKACGISP--CPVNGGWSDFSKWSSCTKSCGGG-IMSRTRTCTNPKPANGGQECKGDETETKAC 107

[Close]

BLAST of PKD1L-2 vs. Ensembl Nematostella
Match: EDO48338 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJU9])

HSP 1 Score: 51.6026 bits (122), Expect = 9.416e-10
Identity = 33/87 (37.93%), Postives = 42/87 (48.28%), Query Frame = 3

Query:   90 RSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            R R CNNPAPSN GQ C G   ++ SC    + CPV     S     S        G   R R C NP+P N G+ C G+   +++C
Sbjct:   28 RRRACNNPAPSNGGQQCLGDDVESGSCMTT-VACPVVDGGWSEYGPWSVCSKSCGGGERYRERTCTNPSPVNGGKTCDGIGMQSETC 113

[Close]

BLAST of PKD1L-2 vs. Ensembl Nematostella
Match: EDO49967 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RES9])

HSP 1 Score: 50.8322 bits (120), Expect = 2.021e-9
Identity = 33/87 (37.93%), Postives = 42/87 (48.28%), Query Frame = 3

Query:   90 RSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            R+R C NPAP   G+ C G STD QSC  +P          S  +           G   R+R CN+PAP N G+ C G S  T++C
Sbjct:   28 RTRTCTNPAPIGGGRSCYGSSTDKQSCNPIPCR---VDGQWSSWSGWDSCSMSCGGGTQSRTRACNSPAPRNGGRQCPGQSGQTRNC 111

[Close]

BLAST of PKD1L-2 vs. Ensembl Nematostella
Match: EDO49968 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RET0])

HSP 1 Score: 50.0618 bits (118), Expect = 2.962e-9
Identity = 30/90 (33.33%), Postives = 47/90 (52.22%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            +  RSR+CN P+P + G+ C G + +T+SC +   +CP      S  +           G+ +R+R C NPAP   G+ C G S++ Q C
Sbjct:   21 VQARSRMCNKPSPRDGGRTCPGKTVETRSCNS--RDCP-IDGKWSSWSSWQTCSRTCGGGMRKRTRSCTNPAPKGGGRGCYGRSSEQQIC 107

[Close]

BLAST of PKD1L-2 vs. Ensembl Nematostella
Match: EDO49202 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RHC2])

HSP 1 Score: 49.2914 bits (116), Expect = 7.291e-9
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGL--STDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            I QR+R C+NPAP N G  C  L  S +TQ+C + P  CPV+G +S W  ++ CSV+CG    M R R C NP P+N G+ C G +T+T+ C
Sbjct:   21 IQQRTRACSNPAPKNNGTSCESLGPSFETQACNSKP--CPVDGGFSEWGNYTECSVTCGGGTQM-RLRTCTNPQPANGGRPCLGETTETKDC 109

[Close]

BLAST of PKD1L-2 vs. Ensembl Medaka
Match: thbs1b (thrombospondin-1a [Source:NCBI gene;Acc:100302438])

HSP 1 Score: 52.7582 bits (125), Expect = 8.662e-9
Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P P   G+ C G +  TQ C   P  CP+NG+W  WS W  C+++CG   +  R RLCNNPAP   G++C G +TD Q C
Sbjct:  450 VITRIRLCNSPTPQLGGKQCEGEARQTQKCQKSP--CPINGNWGPWSPWDLCTLTCGGG-VQTRKRLCNNPAPLYGGKECVGEATDRQMC 536

[Close]

BLAST of PKD1L-2 vs. Ensembl Medaka
Match: thbs1b (thrombospondin-1a [Source:NCBI gene;Acc:100302438])

HSP 1 Score: 52.373 bits (124), Expect = 1.010e-8
Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P P   G+ C G +  TQ C   P  CP+NG+W  WS W  C+++CG   +  R RLCNNPAP   G++C G +TD Q C
Sbjct:  432 VITRIRLCNSPTPQLGGKQCEGEARQTQKCQKSP--CPINGNWGPWSPWDLCTLTCGGG-VQTRKRLCNNPAPLYGGKECVGEATDRQMC 518

[Close]

BLAST of PKD1L-2 vs. Ensembl Medaka
Match: thbs1b (thrombospondin-1a [Source:NCBI gene;Acc:100302438])

HSP 1 Score: 52.373 bits (124), Expect = 1.022e-8
Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            ++ R RLCN+P P   G+ C G +  TQ C   P  CP+NG+W  WS W  C+++CG   +  R RLCNNPAP   G++C G +TD Q C
Sbjct:  451 VITRIRLCNSPTPQLGGKQCEGEARQTQKCQKSP--CPINGNWGPWSPWDLCTLTCGGG-VQTRKRLCNNPAPLYGGKECVGEATDRQMC 537

[Close]

BLAST of PKD1L-2 vs. Ensembl Medaka
Match: ENSORLT00000035893.1 (pep primary_assembly:ASM223467v1:19:12271965:12274626:-1 gene:ENSORLG00000025797.1 transcript:ENSORLT00000035893.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 48.9062 bits (115), Expect = 1.091e-7
Identity = 30/88 (34.09%), Postives = 44/88 (50.00%), Query Frame = 3

Query:   84 MQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQS 347
            + R RLCNNP P   G+ C G++ +TQ C N    CP      +  +  S        G+  R R C NPAP + G+ C+G + D ++
Sbjct:   61 ITRVRLCNNPPPQKGGKACKGVAMETQPCKNTL--CP-IAGGWTAWSHWSECSMTCGGGLKSRQRQCLNPAPQHGGKPCAGEAADYEA 145

[Close]

BLAST of PKD1L-2 vs. Ensembl Medaka
Match: unc5da (netrin receptor UNC5D [Source:NCBI gene;Acc:101173079])

HSP 1 Score: 47.7506 bits (112), Expect = 3.714e-7
Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            + +RSR C NPAP N G  C G+S    +C  V   CPV+G W  WS WS+CS  C      QRSR C +P P + G+ C G++  T +CT
Sbjct:  272 VQKRSRTCTNPAPLNGGSFCEGMSVQKSTCNTV---CPVDGGWGDWSEWSACSSDCER----QRSRECTSPEPKHGGRLCDGVAVATDNCT 355

[Close]

BLAST of PKD1L-2 vs. Planmine SMEST
Match: SMESG000014725.1 (SMESG000014725.1)

HSP 1 Score: 130.954 bits (328), Expect = 1.951e-36
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPVNGSWSSWSTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT
Sbjct:  278 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPVNGSWSSWSTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 368

HSP 2 Score: 128.257 bits (321), Expect = 2.249e-35
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNV LNCPVNG+WSSWSTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT
Sbjct:  338 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVSLNCPVNGNWSSWSTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 428

HSP 3 Score: 85.8853 bits (211), Expect = 1.337e-20
Identity = 65/81 (80.25%), Postives = 68/81 (83.95%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCS 323
            IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPVNG WSSWSTWSSCS SCG      R+R C+NP+P N G  CS
Sbjct:  398 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPVNGMWSSWSTWSSCSSSCGFGT-RSRTRNCDNPSPLNGGLGCS 477

HSP 4 Score: 76.6406 bits (187), Expect = 2.062e-17
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 3

Query:   90 RSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            RSR+C +   SN+G  C G   DTQ+C N  L CP+NG+WSSW+TWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT
Sbjct:  224 RSRVCIDS--SNSGLPCPGTDKDTQACGNSTL-CPINGNWSSWNTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 308

[Close]

BLAST of PKD1L-2 vs. Planmine SMEST
Match: SMESG000014725.1 (SMESG000014725.1)

HSP 1 Score: 130.954 bits (328), Expect = 1.988e-36
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPVNGSWSSWSTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT
Sbjct:  276 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPVNGSWSSWSTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 366

HSP 2 Score: 128.257 bits (321), Expect = 2.271e-35
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNV LNCPVNG+WSSWSTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT
Sbjct:  336 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVSLNCPVNGNWSSWSTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 426

HSP 3 Score: 85.8853 bits (211), Expect = 1.390e-20
Identity = 65/81 (80.25%), Postives = 68/81 (83.95%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCS 323
            IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPVNG WSSWSTWSSCS SCG      R+R C+NP+P N G  CS
Sbjct:  396 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPVNGMWSSWSTWSSCSSSCGFGT-RSRTRNCDNPSPLNGGLGCS 475

HSP 4 Score: 76.6406 bits (187), Expect = 2.062e-17
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 3

Query:   90 RSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            RSR+C +   SN+G  C G   DTQ+C N  L CP+NG+WSSW+TWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT
Sbjct:  222 RSRVCIDS--SNSGLPCPGTDKDTQACGNSTL-CPINGNWSSWNTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 306

[Close]

BLAST of PKD1L-2 vs. Planmine SMEST
Match: SMESG000024603.1 (SMESG000024603.1)

HSP 1 Score: 51.9878 bits (123), Expect = 1.064e-8
Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXX---XXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            +M R RLCN+P P   G++C+ + T+T +C N P   P++G+WS WS WS+CS +     S  +  RSRLCNNP P + G  C G S +++ C
Sbjct:  142 LMTRFRLCNSPPPQLGGKNCTVIFTETDNCFNSPCPVPIHGNWSEWSEWSACSKTCRLPQSAPLQVRSRLCNNPVPKDGGLKCDGESLNSRFC 234

[Close]

BLAST of PKD1L-2 vs. Planmine SMEST
Match: SMESG000014728.1 (SMESG000014728.1)

HSP 1 Score: 44.669 bits (104), Expect = 3.568e-6
Identity = 21/36 (58.33%), Postives = 24/36 (66.67%), Query Frame = 3

Query:   84 MQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNC 191
            +QR+R CNNP PSN G +CSG S D Q C N   NC
Sbjct:  272 IQRTRECNNPFPSNGGVNCSGPSVDNQMCFNYSQNC 307

[Close]

BLAST of PKD1L-2 vs. Planmine SMEST
Match: SMESG000021248.1 (SMESG000021248.1)

HSP 1 Score: 43.8986 bits (102), Expect = 6.585e-6
Identity = 29/90 (32.22%), Postives = 43/90 (47.78%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCTNVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSC 350
            I Q++R C+NP P   G +C G +   + C  +P  CP      S     S   +   +G+ +R R C  P+P+  GQ C G S + Q C
Sbjct: 3261 IKQKARRCDNPTPKFGGANCVGTNIKKEKCNELP--CP-VHGQWSNWGSWSECSTECGSGLQERDRTCTEPSPNFGGQWCRGPSKEVQKC 3347

HSP 2 Score: 43.8986 bits (102), Expect = 7.991e-6
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 3

Query:   81 IMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT-NVPLNCPXXXXXXXXXXXXXXXXXXXXXXIMQRSRLCNNPAPSNAGQDCSGLSTDTQSCT 353
            I QR+R C+NP PSN G+ C G + +   C  N+P  CP+NG+WS W  W+ CS++CG  G  +R R CN+P P N G+ C G   + ++C+
Sbjct: 3145 IRQRTRRCDNPPPSNLGKPCIGEAIEDILCEGNLP--CPINGAWSEWKPWTVCSITCGFGGSQRRDRSCNSPEPKNNGKFCDGKELEVRACS 3234

The following BLAST results are available for this feature:

BLAST of PKD1L-2 vs. Ensembl Human
BLAST of PKD1L-2 vs. Ensembl Celegans
BLAST of PKD1L-2 vs. Ensembl Fly
BLAST of PKD1L-2 vs. Ensembl Zebrafish
BLAST of PKD1L-2 vs. Ensembl Xenopus
BLAST of PKD1L-2 vs. Ensembl Mouse
BLAST of PKD1L-2 vs. UniProt/SwissProt
BLAST of PKD1L-2 vs. TrEMBL
BLAST of PKD1L-2 vs. Ensembl Cavefish
BLAST of PKD1L-2 vs. Ensembl Sea Lamprey
BLAST of PKD1L-2 vs. Ensembl Yeast
BLAST of PKD1L-2 vs. Ensembl Nematostella
BLAST of PKD1L-2 vs. Ensembl Medaka
BLAST of PKD1L-2 vs. Planmine SMEST

BLAST of PKD1L-2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
THBS1	4.811e-7	33.70	thrombospondin 1 [Source:HGNC Symbol;Acc:HGNC:1178...	[more]
UNC5B	8.324e-7	44.94	unc-5 netrin receptor B [Source:HGNC Symbol;Acc:HG...	[more]
UNC5B	8.331e-7	44.94	unc-5 netrin receptor B [Source:HGNC Symbol;Acc:HG...	[more]
SEMA5A	8.815e-7	46.67	semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]	[more]
SEMA5A	8.815e-7	46.67	semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]	[more]

BLAST of PKD1L-2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of PKD1L-2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of PKD1L-2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
thbs1a	8.756e-8	34.44	thrombospondin 1a [Source:ZFIN;Acc:ZDB-GENE-120402...	[more]
thbs1a	9.411e-8	34.44	thrombospondin 1a [Source:ZFIN;Acc:ZDB-GENE-120402...	[more]
thbs1b	2.201e-7	33.33	thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708...	[more]
thbs1b	2.201e-7	33.33	thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708...	[more]
thbs1b	2.266e-7	33.33	thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708...	[more]

BLAST of PKD1L-2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
THBS2	1.813e-8	33.71	thrombospondin 2 [Source:NCBI gene;Acc:100494997]	[more]
THBS2	1.423e-7	33.71	thrombospondin 2 [Source:NCBI gene;Acc:100494997]	[more]
THBS2	1.624e-7	33.71	thrombospondin 2 [Source:NCBI gene;Acc:100494997]	[more]
THBS2	1.774e-7	33.71	thrombospondin 2 [Source:NCBI gene;Acc:100494997]	[more]
THBS2	1.781e-7	33.71	thrombospondin 2 [Source:NCBI gene;Acc:100494997]	[more]

BLAST of PKD1L-2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Thbs1	3.400e-7	33.70	thrombospondin 1 [Source:MGI Symbol;Acc:MGI:98737]	[more]
Thbs2	3.639e-7	44.94	thrombospondin 2 [Source:MGI Symbol;Acc:MGI:98738]	[more]
Unc5b	3.804e-7	46.07	unc-5 netrin receptor B [Source:MGI Symbol;Acc:MGI...	[more]
Unc5b	4.195e-7	46.07	unc-5 netrin receptor B [Source:MGI Symbol;Acc:MGI...	[more]
Unc5c	4.379e-7	44.94	unc-5 netrin receptor C [Source:MGI Symbol;Acc:MGI...	[more]

BLAST of PKD1L-2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|C5IAW9\|UN5BB_XENLA	1.624e-6	44.94	Netrin receptor UNC5B-b OS=Xenopus laevis OX=8355 ...	[more]
sp\|Q8JGT4\|UN5BA_XENLA	1.722e-6	44.94	Netrin receptor UNC5B-a OS=Xenopus laevis OX=8355 ...	[more]
sp\|Q28178\|TSP1_BOVIN	2.180e-6	45.56	Thrombospondin-1 OS=Bos taurus OX=9913 GN=THBS1 PE...	[more]
sp\|P07996\|TSP1_HUMAN	2.310e-6	33.70	Thrombospondin-1 OS=Homo sapiens OX=9606 GN=THBS1 ...	[more]
sp\|P35441\|TSP1_MOUSE	2.333e-6	33.70	Thrombospondin-1 OS=Mus musculus OX=10090 GN=Thbs1...	[more]

BLAST of PKD1L-2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0H3YFF8	5.532e-18	80.25	PKD1L-2 OS=Schmidtea mediterranea OX=79327 GN=PKD1...	[more]
A7SKI9	6.784e-10	50.00	Predicted protein (Fragment) OS=Nematostella vecte...	[more]
A0A3M6UFN0	3.041e-9	51.69	Uncharacterized protein OS=Pocillopora damicornis ...	[more]
A0A3M6U2W8	8.967e-9	50.00	Uncharacterized protein OS=Pocillopora damicornis ...	[more]
A0A2B4STD3	2.393e-8	40.23	Plasma kallikrein OS=Stylophora pistillata OX=5042...	[more]

BLAST of PKD1L-2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
thbs1b	9.794e-9	46.67	thrombospondin-1-like [Source:NCBI gene;Acc:103031...	[more]
ENSAMXT00000044661.1	2.096e-8	32.58	pep primary_assembly:Astyanax_mexicanus-2.0:APWO02...	[more]
unc5da	1.493e-7	45.05	unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE...	[more]
unc5da	1.523e-7	45.05	unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE...	[more]
unc5a	4.165e-7	47.19	unc-5 netrin receptor A [Source:ZFIN;Acc:ZDB-GENE-...	[more]

BLAST of PKD1L-2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
thbs1a	2.552e-7	44.83	thrombospondin 1a [Source:ZFIN;Acc:ZDB-GENE-120402...	[more]
ENSPMAT00000000917.1	8.396e-7	40.00	pep scaffold:Pmarinus_7.0:GL477542:941:92377:1 gen...	[more]
ENSPMAT00000000925.1	1.078e-6	40.00	pep scaffold:Pmarinus_7.0:GL477542:4188:92377:1 ge...	[more]
ENSPMAT00000008404.1	1.367e-6	43.82	pep scaffold:Pmarinus_7.0:GL476608:255441:311832:-...	[more]
ENSPMAT00000003861.1	2.222e-6	43.82	pep scaffold:Pmarinus_7.0:GL476449:2630:55902:-1 g...	[more]

BLAST of PKD1L-2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of PKD1L-2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO35765	9.382e-14	50.00	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO48338	9.416e-10	37.93	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49967	2.021e-9	37.93	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49968	2.962e-9	33.33	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49202	7.291e-9	46.74	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of PKD1L-2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
thbs1b	8.662e-9	45.56	thrombospondin-1a [Source:NCBI gene;Acc:100302438]	[more]
thbs1b	1.010e-8	45.56	thrombospondin-1a [Source:NCBI gene;Acc:100302438]	[more]
thbs1b	1.022e-8	45.56	thrombospondin-1a [Source:NCBI gene;Acc:100302438]	[more]
ENSORLT00000035893.1	1.091e-7	34.09	pep primary_assembly:ASM223467v1:19:12271965:12274...	[more]
unc5da	3.714e-7	43.96	netrin receptor UNC5D [Source:NCBI gene;Acc:101173...	[more]

BLAST of PKD1L-2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000014725.1	1.951e-36	100.00	SMESG000014725.1	[more]
SMESG000014725.1	1.988e-36	100.00	SMESG000014725.1	[more]
SMESG000024603.1	1.064e-8	43.01	SMESG000024603.1	[more]
SMESG000014728.1	3.568e-6	58.33	SMESG000014728.1	[more]
SMESG000021248.1	6.585e-6	32.22	SMESG000021248.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30001229 ID=SMED30001229|Name=PKD1L-2|organism=Schmidtea mediterranea sexual|type=transcript|length=353bp
CATTGAATTGTCCAGTTAATGGAAGTTGGAGTTCATGGAGTACATGGTCA
TCATGCTCGGTTTCGTGTGGATCCAATGGCATTATGCAAAGAAGCCGCCT
ATGTAACAATCCGGCACCGTCAAACGCTGGACAGGACTGTTCTGGTCTTT
CAACTGATACTCAAAGCTGTACAAATGTTCCATTGAATTGTCCAGTTAAT
GGAAGTTGGAGTTCATGGAGTACATGGTCATCATGCTCGGTTTCGTGTGG
ATCCAATGGCATTATGCAAAGAAGCCGCCTATGTAACAATCCGGCACCGT
CAAACGCTGGACAGGACTGTTCTGGTCTTTCAACTGATACTCAAAGCTGT
ACA

protein sequence of SMED30001229-orf-1

>SMED30001229-orf-1 ID=SMED30001229-orf-1|Name=SMED30001229-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=117bp
LNCPVNGSWSSWSTWSSCSVSCGSNGIMQRSRLCNNPAPSNAGQDCSGLS
TDTQSCTNVPLNCPVNGSWSSWSTWSSCSVSCGSNGIMQRSRLCNNPAPS
NAGQDCSGLSTDTQSCT

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **molecular function**
Term	Definition
GO:0004096	catalase activity
GO:0020037	heme binding

Vocabulary: **biological process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0098869	cellular oxidant detoxification

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000099	neuron
PLANA:0000418	head
PLANA:0007520	dorsal-ventral axis of the whole animal

Vocabulary: **INTERPRO**
Term	Definition
IPR036383	TSP1_rpt_sf
IPR000884	TSP1_rpt

Vocabulary: **cellular component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01705	TSP1REPEAT	coord: 3..16 score: 54.27 coord: 22..33 score: 44.35 coord: 41..52 score: 34.23
None	No IPR available	PANTHER	PTHR22906:SF11	PROPERDIN	coord: 2..112
None	No IPR available	PANTHER	PTHR22906	PROPERDIN	coord: 2..112
IPR000884	Thrombospondin type-1 (TSP1) repeat	SMART	SM00209	TSP1_2	coord: 5..60 e-value: 2.5E-11 score: 53.6 coord: 65..113 e-value: 3.9E-7 score: 39.7
IPR000884	Thrombospondin type-1 (TSP1) repeat	PFAM	PF00090	TSP_1	coord: 6..54 e-value: 2.8E-13 score: 49.8 coord: 66..113 e-value: 3.4E-12 score: 46.4
IPR000884	Thrombospondin type-1 (TSP1) repeat	PROSITE	PS50092	TSP1	coord: 2..60 score: 12.901
IPR000884	Thrombospondin type-1 (TSP1) repeat	PROSITE	PS50092	TSP1	coord: 62..113 score: 12.112
IPR036383	Thrombospondin type-1 (TSP1) repeat superfamily	GENE3D	G3DSA:2.20.100.10		coord: 62..113 e-value: 3.5E-18 score: 67.6 coord: 2..56 e-value: 1.8E-18 score: 68.4
IPR036383	Thrombospondin type-1 (TSP1) repeat superfamily	SUPERFAMILY	SSF82895	TSP-1 type 1 repeat	coord: 1..52
IPR036383	Thrombospondin type-1 (TSP1) repeat superfamily	SUPERFAMILY	SSF82895	TSP-1 type 1 repeat	coord: 59..112

Main menu

PKD1L-2

Zeng et. al., 2018

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Owlery

blazegraph-runner