Elongation factor 1-beta

Overview


Name	Elongation factor 1-beta
Smed ID	SMED30001172
Length (bp)	713

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Elongation factor 1-beta (SMED30001172) t-SNE clustered cells

Violin plots show distribution of expression levels for Elongation factor 1-beta (SMED30001172) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Elongation factor 1-beta (SMED30001172) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Elongation factor 1-beta (SMED30001172) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30001172

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 10

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
pharynx	SMED30001172	SMESG000026862.1	dd_Smed_v4_206_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30001172	SMESG000026862.1	dd_Smed_v4_206_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30001172	SMESG000026862.1	dd_Smed_v4_206_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30001172	SMESG000026862.1	dd_Smed_v4_206_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30001172	SMESG000026862.1	dd_Smed_v4_206_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30001172	SMESG000026862.1	dd_Smed_v4_206_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30001172	SMESG000026862.1	dd_Smed_v4_206_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30001172	SMESG000026862.1	dd_Smed_v4_206_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30001172	SMESG000026862.1	dd_Smed_v4_206_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Category 2 cell	SMED30001172	SMESG000026862.1	dd_Smed_v6_206_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of Elongation factor 1-beta vs. Ensembl Human
Match: EEF1B2 (eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208])

HSP 1 Score: 220.705 bits (561), Expect = 4.718e-72
Identity = 137/226 (60.62%), Postives = 162/226 (71.68%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVD-----------------LFGSDDEVDEE-AERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LND+L +KSYI GY PS ADV VF+A  S       HALRW+NHIKS+ E+EK +   V K   K    +V+                 LFGSDDE + E A+R+++ERL  Y +KK+ K A++AKSSI LDVKPWDDETDMA+LE+CVRSI ADGL+WG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSY-EKEKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNKI 225

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Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVD-----------------LFGSDDEVDEE-AERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LND+L +KSYI GY PS ADV VF+A  S       HALRW+NHIKS+ E+EK +   V K   K    +V+                 LFGSDDE + E A+R+++ERL  Y +KK+ K A++AKSSI LDVKPWDDETDMA+LE+CVRSI ADGL+WG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSY-EKEKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNKI 225

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Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVD-----------------LFGSDDEVDEE-AERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LND+L +KSYI GY PS ADV VF+A  S       HALRW+NHIKS+ E+EK +   V K   K    +V+                 LFGSDDE + E A+R+++ERL  Y +KK+ K A++AKSSI LDVKPWDDETDMA+LE+CVRSI ADGL+WG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSY-EKEKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNKI 225

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Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVD-----------------LFGSDDEVDEE-AERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LND+L +KSYI GY PS ADV VF+A  S       HALRW+NHIKS+ E+EK +   V K   K    +V+                 LFGSDDE + E A+R+++ERL  Y +KK+ K A++AKSSI LDVKPWDDETDMA+LE+CVRSI ADGL+WG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSY-EKEKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNKI 225

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Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVD-----------------LFGSDDEVDEE-AERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LND+L +KSYI GY PS ADV VF+A  S       HALRW+NHIKS+ E+EK +   V K   K    +V+                 LFGSDDE + E A+R+++ERL  Y +KK+ K A++AKSSI LDVKPWDDETDMA+LE+CVRSI ADGL+WG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSY-EKEKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNKI 225

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BLAST of Elongation factor 1-beta vs. Ensembl Celegans
Match: eef-1B.1 (Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460])

HSP 1 Score: 154.836 bits (390), Expect = 6.549e-47
Identity = 102/211 (48.34%), Postives = 137/211 (64.93%), Query Frame = 3

Query:   54 GNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC--YFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEV---DLFGSDDEV-DEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITK-FEDFVQSMDVAAFNKI 665
             ++K   G +  N  L  +++  G+  S  D ++F A GS  +   Y +  RW+ ++ S+++ E+K +     +AP     +    DLFGSDDE  D E  +I +ERL AYA KK+ K   IAKSS+ LDVKPWDDETD+ E+EK VRSI  DGL+WG +KL+P+GYGIKKLQII V+ED KV  D L E+IT  FED VQS+D+ AFNKI
Sbjct:    3 ADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAERKTWASAGGSAPAAAAADGDDFDLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAFNKI 213

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BLAST of Elongation factor 1-beta vs. Ensembl Celegans
Match: eef-1B.2 (Probable elongation factor 1-beta/1-delta 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U2H9])

HSP 1 Score: 120.553 bits (301), Expect = 5.349e-33
Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = 3

Query:  420 LDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITK-FEDFVQSMDVAAFNKI 665
            LDVKPWDDETD+ E+EK VRSI  DGL+WG +KL+P+GYGIKKLQII V+ED KV  D L E+IT  FED VQS+D+ AFNKI
Sbjct:  181 LDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAFNKI 263

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Query:  420 LDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITK-FEDFVQSMDVAAFNKI 665
            LDVKPWDDETD+ E+EK VRSI  DGL+WG +KL+P+GYGIKKLQII V+ED KV  D L E+IT  FED VQS+D+ AFNKI
Sbjct:  181 LDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAFNKI 263

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BLAST of Elongation factor 1-beta vs. Ensembl Fly
Match: eEF1beta (gene:FBgn0028737 transcript:FBtr0332947)

HSP 1 Score: 190.274 bits (482), Expect = 1.803e-60
Identity = 130/222 (58.56%), Postives = 157/222 (70.72%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEEKKAFR-----QVVKTAPK---------EEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG++    G  +LN FL + SYI+GY+PS AD+ VF A G        +  RW+ HI SF   E+ A+      Q+    P          ++DD+VDLFGSDDE DEEAERIKQER+ AYAAKKS K A+IAKSS+ LDVKPWDDETDM E+E  VR+I  DGLLWGASKLVPVGYGI KLQI+CV+EDDKV  D L+E+I +FEDFVQS+D+AAFNKI
Sbjct:    1 MAFGDVTTPQGLKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADNVNVARWYRHIASFEAAERAAWSGTPLPQLAGGKPTVAAAAKPAADDDDDVDLFGSDDEEDEEAERIKQERVAAYAAKKSKKPALIAKSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEKIEEFEDFVQSVDIAAFNKI 222

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BLAST of Elongation factor 1-beta vs. Ensembl Fly
Match: eEF1beta (gene:FBgn0028737 transcript:FBtr0345627)

HSP 1 Score: 190.274 bits (482), Expect = 1.803e-60
Identity = 130/222 (58.56%), Postives = 157/222 (70.72%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEEKKAFR-----QVVKTAPK---------EEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG++    G  +LN FL + SYI+GY+PS AD+ VF A G        +  RW+ HI SF   E+ A+      Q+    P          ++DD+VDLFGSDDE DEEAERIKQER+ AYAAKKS K A+IAKSS+ LDVKPWDDETDM E+E  VR+I  DGLLWGASKLVPVGYGI KLQI+CV+EDDKV  D L+E+I +FEDFVQS+D+AAFNKI
Sbjct:    1 MAFGDVTTPQGLKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADNVNVARWYRHIASFEAAERAAWSGTPLPQLAGGKPTVAAAAKPAADDDDDVDLFGSDDEEDEEAERIKQERVAAYAAKKSKKPALIAKSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEKIEEFEDFVQSVDIAAFNKI 222

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BLAST of Elongation factor 1-beta vs. Ensembl Fly
Match: eEF1delta (gene:FBgn0032198 transcript:FBtr0079952)

HSP 1 Score: 137.887 bits (346), Expect = 1.303e-39
Identity = 85/123 (69.11%), Postives = 99/123 (80.49%), Query Frame = 3

Query:  300 LFGSD-DEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LFGSD +E D EA RI++ERL AYAAKK+ K  IIAKS+I LDVKPWDDETD+  +E  +R I+ DGLLWGASK VPV +GI+KL I CVVEDDKV  D+L EEI K EDFVQS+D+AAFNKI
Sbjct:  134 LFGSDSEEEDGEAARIREERLAAYAAKKAKKVQIIAKSNIILDVKPWDDETDLKVMETEIRKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEEIEKLEDFVQSVDIAAFNKI 256

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BLAST of Elongation factor 1-beta vs. Ensembl Fly
Match: eEF1delta (gene:FBgn0032198 transcript:FBtr0079951)

HSP 1 Score: 137.117 bits (344), Expect = 1.331e-39
Identity = 85/123 (69.11%), Postives = 99/123 (80.49%), Query Frame = 3

Query:  300 LFGSD-DEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LFGSD +E D EA RI++ERL AYAAKK+ K  IIAKS+I LDVKPWDDETD+  +E  +R I+ DGLLWGASK VPV +GI+KL I CVVEDDKV  D+L EEI K EDFVQS+D+AAFNKI
Sbjct:  107 LFGSDSEEEDGEAARIREERLAAYAAKKAKKVQIIAKSNIILDVKPWDDETDLKVMETEIRKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEEIEKLEDFVQSVDIAAFNKI 229

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BLAST of Elongation factor 1-beta vs. Ensembl Zebrafish
Match: eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310])

HSP 1 Score: 210.305 bits (534), Expect = 2.928e-68
Identity = 140/225 (62.22%), Postives = 161/225 (71.56%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEE------KKAFRQVVKTA-----------PKEEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LN+FL +KSYI GY PS AD+ VF A   +      HALRW+NHIKSF +E+      KK   Q                  E+DD++DLFGSD+E DEEA +IK+ERL AY AKK+ K A+IAKSSI LDVKPWDDETDMA+LE+CVRSI  DGL+WG SKL+PVGYGIKKLQI CVVEDDKVGTD LEE IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKTPAGLKVLNNFLSDKSYIEGYVPSQADIAVFDALSGVPSADLCHALRWYNHIKSFQKEKGSLPGVKKPLGQYGPAGMEDTTAAAPAAADEDDDDIDLFGSDEEEDEEAAKIKEERLAAYNAKKAKKPALIAKSSILLDVKPWDDETDMAKLEECVRSIQLDGLVWGQSKLLPVGYGIKKLQIACVVEDDKVGTDQLEELITAFEDYVQSMDVAAFNKI 225

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BLAST of Elongation factor 1-beta vs. Ensembl Zebrafish
Match: eef1da (eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-040426-2740])

HSP 1 Score: 175.252 bits (443), Expect = 3.062e-55
Identity = 96/122 (78.69%), Postives = 110/122 (90.16%), Query Frame = 3

Query:  300 LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LFGSD+E DEEAERIK ER+  Y+ +K+ K A+IAKSSI LDVKPWDDETDM++LE+CVRS+  DGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTD LEEEIT+FED+VQS+D+AAFNKI
Sbjct:   43 LFGSDEE-DEEAERIKAERVKEYSQRKAKKPALIAKSSILLDVKPWDDETDMSKLEECVRSVQMDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDILEEEITQFEDYVQSVDIAAFNKI 163

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BLAST of Elongation factor 1-beta vs. Ensembl Zebrafish
Match: eef1da (eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-040426-2740])

HSP 1 Score: 176.022 bits (445), Expect = 1.862e-54
Identity = 96/122 (78.69%), Postives = 110/122 (90.16%), Query Frame = 3

Query:  300 LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LFGSD+E DEEAERIK ER+  Y+ +K+ K A+IAKSSI LDVKPWDDETDM++LE+CVRS+  DGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTD LEEEIT+FED+VQS+D+AAFNKI
Sbjct:  125 LFGSDEE-DEEAERIKAERVKEYSQRKAKKPALIAKSSILLDVKPWDDETDMSKLEECVRSVQMDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDILEEEITQFEDYVQSVDIAAFNKI 245

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BLAST of Elongation factor 1-beta vs. Ensembl Zebrafish
Match: eef1db (eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544])

HSP 1 Score: 166.007 bits (419), Expect = 3.239e-50
Identity = 100/122 (81.97%), Postives = 113/122 (92.62%), Query Frame = 3

Query:  300 LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LFGSD+E DEEAER+K++RL  YAAKK+ K A+IAKSSI LDVKPWDDETDM++LE+CVRS+  DGLLWGASKL+PVGYGIKKLQI CVVEDDKVGTDFLEEEITKFED+VQS+DVAAFNKI
Sbjct:  153 LFGSDEEEDEEAERLKEQRLQEYAAKKAKKPALIAKSSILLDVKPWDDETDMSKLEECVRSVQMDGLLWGASKLMPVGYGIKKLQINCVVEDDKVGTDFLEEEITKFEDYVQSVDVAAFNKI 274

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Zebrafish
Match: eef1db (eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544])

HSP 1 Score: 166.392 bits (420), Expect = 4.154e-50
Identity = 100/122 (81.97%), Postives = 113/122 (92.62%), Query Frame = 3

Query:  300 LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LFGSD+E DEEAER+K++RL  YAAKK+ K A+IAKSSI LDVKPWDDETDM++LE+CVRS+  DGLLWGASKL+PVGYGIKKLQI CVVEDDKVGTDFLEEEITKFED+VQS+DVAAFNKI
Sbjct:  177 LFGSDEEEDEEAERLKEQRLQEYAAKKAKKPALIAKSSILLDVKPWDDETDMSKLEECVRSVQMDGLLWGASKLMPVGYGIKKLQINCVVEDDKVGTDFLEEEITKFEDYVQSVDVAAFNKI 298

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BLAST of Elongation factor 1-beta vs. Ensembl Xenopus
Match: eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:NCBI gene;Acc:448658])

HSP 1 Score: 220.32 bits (560), Expect = 6.748e-72
Identity = 139/229 (60.70%), Postives = 160/229 (69.87%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQA-CGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKT----APKEEDDEVD----------------LFGSDDEVDEE-AERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LN+FL +KSYI GY PS ADV VF A  G+     FHALRW+NHIKS+ E++K +   V K      P   +D                   LFGSDDE + E ++R+++ERL  Y AKKS K A+IAKSSI LDVKPWDDETDMA+LE+CVRSI  +GL+WGASKLVPVGYGIKKLQI CVVEDDKVGTD LEE IT FEDFVQSMDVAAFNKI
Sbjct:    1 MGFGDLKSPAGLKVLNEFLADKSYIEGYVPSQADVAVFDALSGAPPADLFHALRWYNHIKSY-EKQKSSLPGVKKPLGNYGPVNIEDTTGGTAKDTKEEDDDDDIDLFGSDDEEENEESKRVREERLAQYEAKKSKKPALIAKSSILLDVKPWDDETDMAKLEECVRSIQMEGLVWGASKLVPVGYGIKKLQIQCVVEDDKVGTDVLEENITAFEDFVQSMDVAAFNKI 228

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Xenopus
Match: ENSXETT00000033558.1 (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:NCBI gene;Acc:496939])

HSP 1 Score: 167.548 bits (423), Expect = 7.574e-51
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 3

Query:  261 VKTAPKEEDDEVD-------LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            V  A KEE+   +       LFGSD+E D EAERI++ERL  YA KK+ K  +IAKSSI LDVKPWDDETDMA+LE+CVR++  DGLLWG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEEEITKFED+VQS+D+AAFNKI
Sbjct:  112 VTPAAKEENGTAEDDDDDIDLFGSDEEEDAEAERIREERLRQYAEKKAKKPGVIAKSSILLDVKPWDDETDMAKLEECVRTVQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDYVQSVDIAAFNKI 253

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Xenopus
Match: ENSXETT00000019492.1 (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:NCBI gene;Acc:496939])

HSP 1 Score: 168.703 bits (426), Expect = 1.316e-50
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 3

Query:  261 VKTAPKEEDDEVD-------LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            V  A KEE+   +       LFGSD+E D EAERI++ERL  YA KK+ K  +IAKSSI LDVKPWDDETDMA+LE+CVR++  DGLLWG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEEEITKFED+VQS+D+AAFNKI
Sbjct:  181 VTPAAKEENGTAEDDDDDIDLFGSDEEEDAEAERIREERLRQYAEKKAKKPGVIAKSSILLDVKPWDDETDMAKLEECVRTVQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDYVQSVDIAAFNKI 322

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Xenopus
Match: ENSXETT00000019482.1 (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:NCBI gene;Acc:496939])

HSP 1 Score: 167.933 bits (424), Expect = 1.493e-50
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 3

Query:  261 VKTAPKEEDDEVD-------LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            V  A KEE+   +       LFGSD+E D EAERI++ERL  YA KK+ K  +IAKSSI LDVKPWDDETDMA+LE+CVR++  DGLLWG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEEEITKFED+VQS+D+AAFNKI
Sbjct:  157 VTPAAKEENGTAEDDDDDIDLFGSDEEEDAEAERIREERLRQYAEKKAKKPGVIAKSSILLDVKPWDDETDMAKLEECVRTVQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDYVQSVDIAAFNKI 298

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Xenopus
Match: ENSXETT00000033553.1 (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:NCBI gene;Acc:496939])

HSP 1 Score: 168.703 bits (426), Expect = 1.120e-47
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 3

Query:  261 VKTAPKEEDDEVD-------LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            V  A KEE+   +       LFGSD+E D EAERI++ERL  YA KK+ K  +IAKSSI LDVKPWDDETDMA+LE+CVR++  DGLLWG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEEEITKFED+VQS+D+AAFNKI
Sbjct:  576 VTPAAKEENGTAEDDDDDIDLFGSDEEEDAEAERIREERLRQYAEKKAKKPGVIAKSSILLDVKPWDDETDMAKLEECVRTVQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDYVQSVDIAAFNKI 717

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Mouse
Match: Eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520])

HSP 1 Score: 217.624 bits (553), Expect = 4.529e-71
Identity = 135/226 (59.73%), Postives = 161/226 (71.24%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQAC-GSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVD-----------------LFGSDDEVDEE-AERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LND+L +KSYI GY PS ADV VF+A  G       HALRW+NHIKS+ E+EK +   V K+  K     V+                 LFGSDDE + E A+++++ERL  Y +KK+ K A++AKSSI LDVKPWDDETDM +LE+CVRSI ADGL+WG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKTPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSY-EKEKASLPGVKKSLGKYGPSSVEDTTGSGAADAKDDDDIDLFGSDDEEESEEAKKLREERLAQYESKKAKKPAVVAKSSILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNKI 225

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Mouse
Match: Eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520])

HSP 1 Score: 165.236 bits (417), Expect = 5.447e-51
Identity = 109/217 (50.23%), Postives = 130/217 (59.91%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYING----------YSPSTADVEVFQACGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LND+L +KSYI G          Y PS+  VE     G+        +  F        EE                               A+++++ERL  Y +KK+ K A++AKSSI LDVKPWDDETDM +LE+CVRSI ADGL+WG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKTPAGLQVLNDYLADKSYIEGLPGVKKSLGKYGPSS--VEDTTGSGAADAKDDDDIDLFGSDDEEESEE-------------------------------AKKLREERLAQYESKKAKKPAVVAKSSILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNKI 184

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Mouse
Match: Eef1d (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:MGI Symbol;Acc:MGI:1913906])

HSP 1 Score: 164.466 bits (415), Expect = 1.325e-50
Identity = 102/158 (64.56%), Postives = 121/158 (76.58%), Query Frame = 3

Query:  216 IKSFSEEEKKAFRQV----VKTAPKEEDDE---VDLFGSDDEVDEEAE-RIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            + S S +     RQV     K A   EDDE   +DLFGSD+E +++   R+++ERL  YA KK+ K  ++AKSSI LDVKPWDDETDMA+LE CVRSI  DGL+WGASKLVPVGYGI+KLQI CVVEDDKVGTD LEEEITKFE+ VQS+D+AAFNKI
Sbjct:   33 VTSGSRQHVSPMRQVEPPTKKGATPAEDDEDKDIDLFGSDEEEEDKEAARLREERLRQYAEKKAKKPTLVAKSSILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 190

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Mouse
Match: Eef1d (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:MGI Symbol;Acc:MGI:1913906])

HSP 1 Score: 165.236 bits (417), Expect = 5.112e-50
Identity = 93/130 (71.54%), Postives = 112/130 (86.15%), Query Frame = 3

Query:  279 EEDDEVDLFGSDDEVDEEAE-RIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            +ED ++DLFGSD+E +++   R+++ERL  YA KK+ K  ++AKSSI LDVKPWDDETDMA+LE CVRSI  DGL+WGASKLVPVGYGI+KLQI CVVEDDKVGTD LEEEITKFE+ VQS+D+AAFNKI
Sbjct:  128 DEDKDIDLFGSDEEEEDKEAARLREERLRQYAEKKAKKPTLVAKSSILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 257

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Mouse
Match: Eef1d (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:MGI Symbol;Acc:MGI:1913906])

HSP 1 Score: 165.236 bits (417), Expect = 5.112e-50
Identity = 93/130 (71.54%), Postives = 112/130 (86.15%), Query Frame = 3

Query:  279 EEDDEVDLFGSDDEVDEEAE-RIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            +ED ++DLFGSD+E +++   R+++ERL  YA KK+ K  ++AKSSI LDVKPWDDETDMA+LE CVRSI  DGL+WGASKLVPVGYGI+KLQI CVVEDDKVGTD LEEEITKFE+ VQS+D+AAFNKI
Sbjct:  128 DEDKDIDLFGSDEEEEDKEAARLREERLRQYAEKKAKKPTLVAKSSILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 257

[Close]

BLAST of Elongation factor 1-beta vs. UniProt/SwissProt
Match: sp|P12262|EF1B_ARTSA (Elongation factor 1-beta OS=Artemia salina OX=85549 PE=1 SV=3)

HSP 1 Score: 233.032 bits (593), Expect = 1.442e-76
Identity = 126/204 (61.76%), Postives = 160/204 (78.43%), Query Frame = 3

Query:   57 NLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVF-QACGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            +LK + GQ +LN+ L NKSY+ GY PS  DV  F Q   +  D + + LRW+ HI SFS+ EKK F  +  +A KEEDD+VDLFGSD+E DEEAE+IK ER+ AY+ KKS K AI+AKSS+ LD+KPWDDETDMAE+EK VRS+  DGL+WGA+KL+P+ YGIKKL I+CVVEDDKV  D L+E+I++FEDFVQS+D+AAFNK+
Sbjct:    5 DLKAEKGQEQLNELLANKSYLQGYEPSQEDVAAFNQLNKAPSDKFPYLLRWYKHISSFSDAEKKGFPGIPTSASKEEDDDVDLFGSDEE-DEEAEKIKAERMKAYSDKKSKKPAIVAKSSVILDIKPWDDETDMAEMEKLVRSVQMDGLVWGAAKLIPLAYGIKKLSIMCVVEDDKVSIDELQEKISEFEDFVQSVDIAAFNKV 207

[Close]

BLAST of Elongation factor 1-beta vs. UniProt/SwissProt
Match: sp|P30151|EF1B_XENLA (Elongation factor 1-beta OS=Xenopus laevis OX=8355 GN=eef1b PE=1 SV=3)

HSP 1 Score: 233.032 bits (593), Expect = 2.932e-76
Identity = 138/227 (60.79%), Postives = 162/227 (71.37%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEE------KKAFRQ------------VVKTAPKEEDDEVDLFGSDDEVD-EEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   L +FL +KSYI GY PS ADV VF A  +      FHALRW+NHIKS+ +++      KKA                 K   +E+DD++DLFGSDDE + E+A+R++ ERL  Y AKKS K  +IAKSSI LDVKPWDDETDM +LE+C+RSI  DGLLWG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FEDFVQSMDVAAFNKI
Sbjct:    1 MGFGDLKSPAGLKVLKEFLADKSYIEGYVPSQADVAVFDALSAAPPADLFHALRWYNHIKSYEKQKSSLPGVKKALGNYGPVNIEDTTGSAAKETKEEDDDDIDLFGSDDEEESEDAKRVRDERLAQYEAKKSKKPTLIAKSSILLDVKPWDDETDMGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDVLEEKITAFEDFVQSMDVAAFNKI 227

[Close]

BLAST of Elongation factor 1-beta vs. UniProt/SwissProt
Match: sp|Q9YGQ1|EF1B_CHICK (Elongation factor 1-beta OS=Gallus gallus OX=9031 GN=EEF1B PE=2 SV=3)

HSP 1 Score: 225.328 bits (573), Expect = 3.519e-73
Identity = 138/226 (61.06%), Postives = 164/226 (72.57%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVD-----------------LFGSDDEVDEE-AERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LNDFL +KSYI GY PS AD+ VF+A G+      FHALRW+NHIKS+ E+EK +   V K   K    +V+                 LFGSDDE + E A+R+++ERL  Y +KK+ K A++AKSSI LDVKPWDDETDMA+LE+CVRSI ADGL+WG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKSAAGLRVLNDFLADKSYIEGYVPSQADIAVFEAVGAPPPADLFHALRWYNHIKSY-EKEKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNKI 225

[Close]

BLAST of Elongation factor 1-beta vs. UniProt/SwissProt
Match: sp|P24534|EF1B_HUMAN (Elongation factor 1-beta OS=Homo sapiens OX=9606 GN=EEF1B2 PE=1 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 2.266e-71
Identity = 137/226 (60.62%), Postives = 162/226 (71.68%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVD-----------------LFGSDDEVDEE-AERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LND+L +KSYI GY PS ADV VF+A  S       HALRW+NHIKS+ E+EK +   V K   K    +V+                 LFGSDDE + E A+R+++ERL  Y +KK+ K A++AKSSI LDVKPWDDETDMA+LE+CVRSI ADGL+WG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSY-EKEKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNKI 225

[Close]

BLAST of Elongation factor 1-beta vs. UniProt/SwissProt
Match: sp|Q6DET9|EF1B_XENTR (Elongation factor 1-beta OS=Xenopus tropicalis OX=8364 GN=eef1b PE=2 SV=3)

HSP 1 Score: 220.32 bits (560), Expect = 2.906e-71
Identity = 139/229 (60.70%), Postives = 160/229 (69.87%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQA-CGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKT----APKEEDDEVD----------------LFGSDDEVDEE-AERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LN+FL +KSYI GY PS ADV VF A  G+     FHALRW+NHIKS+ E++K +   V K      P   +D                   LFGSDDE + E ++R+++ERL  Y AKKS K A+IAKSSI LDVKPWDDETDMA+LE+CVRSI  +GL+WGASKLVPVGYGIKKLQI CVVEDDKVGTD LEE IT FEDFVQSMDVAAFNKI
Sbjct:    1 MGFGDLKSPAGLKVLNEFLADKSYIEGYVPSQADVAVFDALSGAPPADLFHALRWYNHIKSY-EKQKSSLPGVKKPLGNYGPVNIEDTTGSTAKDTKEEDDDDDIDLFGSDDEEENEESKRVREERLAQYEAKKSKKPALIAKSSILLDVKPWDDETDMAKLEECVRSIQMEGLVWGASKLVPVGYGIKKLQIQCVVEDDKVGTDVLEENITAFEDFVQSMDVAAFNKI 228

[Close]

BLAST of Elongation factor 1-beta vs. TrEMBL
Match: A0A1I8JDA2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig010068g1 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.005e-82
Identity = 144/213 (67.61%), Postives = 165/213 (77.46%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQA-CGSIKDCYFHALRWFNHIKSFSEEEKKAF-----RQVVKTAPKEEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK +    KLN +L +KSYI GY P+ ADV VF A  G+ KD   HALRW+ HI S+S+ E+  F     +     A  ++DD+VDLFGSDDE D EAERIKQERL AY  KK+ K A++AKSSI LDVKPWDDETDMAE+E+CVRSI+ DGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTDFLEEEITKFED VQS+DVAAF KI
Sbjct:    1 MSFGDLKTEGAVQKLNAYLADKSYIEGYQPTAADVAVFDALSGAPKDSLNHALRWYKHIASYSKAERSGFPGDKSKNAAAPAANDDDDDVDLFGSDDENDAEAERIKQERLQAYQEKKAKKPALVAKSSIVLDVKPWDDETDMAEMERCVRSIATDGLLWGASKLVPVGYGIKKLQIGCVVEDDKVGTDFLEEEITKFEDLVQSVDVAAFQKI 213

[Close]

BLAST of Elongation factor 1-beta vs. TrEMBL
Match: A0A267EEA2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig010068g2 PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 2.467e-82
Identity = 144/213 (67.61%), Postives = 165/213 (77.46%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQA-CGSIKDCYFHALRWFNHIKSFSEEEKKAF-----RQVVKTAPKEEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK +    KLN +L +KSYI GY P+ ADV VF A  G+ KD   HALRW+ HI S+S+ E+  F     +     A  ++DD+VDLFGSDDE D EAERIKQERL AY  KK+ K A++AKSSI LDVKPWDDETDMAE+E+CVRSI+ DGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTDFLEEEITKFED VQS+DVAAF KI
Sbjct:    1 MSFGDLKTEGAVKKLNAYLADKSYIEGYQPTAADVAVFDALSGAPKDSLNHALRWYKHIASYSKAERSGFPGDKSKNAAAPAANDDDDDVDLFGSDDENDAEAERIKQERLQAYQEKKAKKPALVAKSSIVLDVKPWDDETDMAEMERCVRSIATDGLLWGASKLVPVGYGIKKLQIGCVVEDDKVGTDFLEEEITKFEDLVQSVDVAAFQKI 213

[Close]

BLAST of Elongation factor 1-beta vs. TrEMBL
Match: A0A5N4A7S9 (Uncharacterized protein OS=Photinus pyralis OX=7054 GN=PPYR_12993 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.172e-76
Identity = 135/218 (61.93%), Postives = 162/218 (74.31%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEEKKAF--------RQVVKTAP--KEEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK D G + L+DFL + SYI+GY P+ AD++ FQ+ G   +  Y HALRW+NHI SF+  E+ +F             TAP   E+DD+VDLF SDDE D EAE+I++ERL AYA KKS K A+IAKSSI LDVKPWDDETDM E+EK VR+I  DGL+WGASKLVPVGYGI KLQI+ VVEDDKV  D + EEI KFEDFVQS+D+AAFNKI
Sbjct:    1 MAFGDLKSDKGVAALDDFLKDHSYISGYQPTQADIQTFQSLGKAPNAKYSHALRWYNHINSFAPAERTSFPGGACPMKTAAPTTAPGKAEDDDDVDLFASDDENDAEAEKIREERLKAYADKKSKKPALIAKSSIVLDVKPWDDETDMKEMEKRVRTIEMDGLVWGASKLVPVGYGIHKLQIMSVVEDDKVSVDLMVEEIEKFEDFVQSVDIAAFNKI 218

[Close]

BLAST of Elongation factor 1-beta vs. TrEMBL
Match: A0A1I8H1D8 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 2.905e-76
Identity = 139/207 (67.15%), Postives = 160/207 (77.29%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQA-CGSIKDCYFHALRWFNHIKSFSEEEKKAF-----RQVVKTAPKEEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDV 647
            M FG+LK +    KLN +L +KSYI GY P+ ADV VF A  G+ KD   HALRW+ HI S+S+ E+  F     +     A  ++DD+VDLFGSDDE D EAERIKQERL AY  KK+ K A++AKSSI LDVKPWDDETDMAE+E+CVRSI+ DGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTDFLEEEITKFED VQS+DV
Sbjct:    1 MSFGDLKTEGAVQKLNAYLADKSYIEGYQPTAADVAVFDALSGAPKDSLNHALRWYKHIASYSKAERSGFPGDKSKNAAAPAANDDDDDVDLFGSDDENDAEAERIKQERLQAYQEKKAKKPALVAKSSIVLDVKPWDDETDMAEMERCVRSIATDGLLWGASKLVPVGYGIKKLQIGCVVEDDKVGTDFLEEEITKFEDLVQSVDV 207

[Close]

BLAST of Elongation factor 1-beta vs. TrEMBL
Match: Q3B8I6 (Wu:fj06d02 protein OS=Xenopus laevis OX=8355 GN=wu:fj06d02 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 1.806e-75
Identity = 140/227 (61.67%), Postives = 163/227 (71.81%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDC-YFHALRWFNHIKSFSEEE------KKAFRQ------------VVKTAPKEEDDEVDLFGSDDEVD-EEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LN+FL +KSYI GY PS ADV VF A  +      FHALRW+NHIKS+ +++      KKA                 K   +E+DD++DLFGSDDE + E+A+R++ ERL  Y AKKS K  +IAKSSI LDVKPWDDETDM +LE+CVRSI  DGLLWG+SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FEDFVQSMDVAAFNKI
Sbjct:    1 MGFGDLKSPAGLKVLNEFLADKSYIEGYVPSQADVAVFNALSAAPPADLFHALRWYNHIKSYEKQKSSLPGVKKALGNYGPVNIEDTTGSAAKETKEEDDDDIDLFGSDDEEESEDAKRVRDERLAQYEAKKSKKPTLIAKSSILLDVKPWDDETDMGKLEECVRSIQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDVLEEKITAFEDFVQSMDVAAFNKI 227

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Cavefish
Match: eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:NCBI gene;Acc:103032892])

HSP 1 Score: 225.328 bits (573), Expect = 3.866e-74
Identity = 139/226 (61.50%), Postives = 157/226 (69.47%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQA-CGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKT----APKEEDDEVD--------------LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LN+FL +KSYI GY PS ADV VF A  G+      HALRW+NHIKS+ ++EK +   V K      P   +D                 LFGSD+E DEE  RIK+ERL AY AKKS K A+IAKSSI LDVKPWDDETDMA+LE+CVRSI  DGL+WG SKLVPVGYGIKKLQI CVVEDDKVGTD LEE IT FED +QS+DVAAFNKI
Sbjct:    1 MGFGDLKTPAGLKVLNEFLADKSYIEGYVPSQADVAVFDALSGAPPTDLCHALRWYNHIKSY-QKEKASLPGVKKPLGQYGPAGVEDTTGGAAPANDDDDDDIDLFGSDEEEDEETARIKEERLAAYNAKKSKKPALIAKSSILLDVKPWDDETDMAKLEECVRSIELDGLVWGQSKLVPVGYGIKKLQIACVVEDDKVGTDQLEELITAFEDHIQSVDVAAFNKI 225

[Close]

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQA-CGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKT----APKEEDDEVD--------------LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LN+FL +KSYI GY PS ADV VF A  G+      HALRW+NHIKS+ ++EK +   V K      P   +D                 LFGSD+E DEE  RIK+ERL AY AKKS K A+IAKSSI LDVKPWDDETDMA+LE+CVRSI  DGL+WG SKLVPVGYGIKKLQI CVVEDDKVGTD LEE IT FED +QS+DVAAFNKI
Sbjct:    1 MGFGDLKTPAGLKVLNEFLADKSYIEGYVPSQADVAVFDALSGAPPTDLCHALRWYNHIKSY-QKEKASLPGVKKPLGQYGPAGVEDTTGGAAPANDDDDDDIDLFGSDEEEDEETARIKEERLAAYNAKKSKKPALIAKSSILLDVKPWDDETDMAKLEECVRSIELDGLVWGQSKLVPVGYGIKKLQIACVVEDDKVGTDQLEELITAFEDHIQSVDVAAFNKI 225

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Cavefish
Match: eef1db (eukaryotic translation elongation factor 1 delta [Source:NCBI gene;Acc:103025006])

HSP 1 Score: 189.504 bits (480), Expect = 4.075e-59
Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 3

Query:  300 LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LFGSDDEVDEEAER+K++RL  YAA+K+ K A+IAKSSI LDVKPWDDETDMA+LE+CVRS+  DGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTD LEEEITKFED+VQS+DVAAFNKI
Sbjct:  175 LFGSDDEVDEEAERLKEQRLQEYAARKAKKPALIAKSSILLDVKPWDDETDMAKLEECVRSVQVDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDLLEEEITKFEDYVQSVDVAAFNKI 296

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Cavefish
Match: eef1db (eukaryotic translation elongation factor 1 delta [Source:NCBI gene;Acc:103025006])

HSP 1 Score: 189.889 bits (481), Expect = 1.840e-56
Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 3

Query:  300 LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LFGSDDEVDEEAER+K++RL  YAA+K+ K A+IAKSSI LDVKPWDDETDMA+LE+CVRS+  DGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTD LEEEITKFED+VQS+DVAAFNKI
Sbjct:  466 LFGSDDEVDEEAERLKEQRLQEYAARKAKKPALIAKSSILLDVKPWDDETDMAKLEECVRSVQVDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDLLEEEITKFEDYVQSVDVAAFNKI 587

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Cavefish
Match: eef1da (eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-040426-2740])

HSP 1 Score: 181.03 bits (458), Expect = 2.994e-56
Identity = 102/122 (83.61%), Postives = 111/122 (90.98%), Query Frame = 3

Query:  300 LFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LFGSD+E DEEAERIK +R+  YAA+KS K  +IAKSSI LDVKPWDDETDMA+LE+CVRS+ ADGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTD LEEEITKFEDFVQS+DVAAFNKI
Sbjct:  148 LFGSDEE-DEEAERIKAQRVQEYAARKSAKPVLIAKSSILLDVKPWDDETDMAKLEECVRSVQADGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDMLEEEITKFEDFVQSVDVAAFNKI 268

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008426.1 (pep scaffold:Pmarinus_7.0:GL501239:13751:22054:1 gene:ENSPMAG00000007622.1 transcript:ENSPMAT00000008426.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 181.03 bits (458), Expect = 4.399e-57
Identity = 105/141 (74.47%), Postives = 121/141 (85.82%), Query Frame = 3

Query:  243 KAFRQVVKTAPKEEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            KA  +V   A KEEDD++DLFGSD++ D EAE++++ER+ AY+ KK+ K  +IAKSSI LDVKPWDDETDMAELE  VRS+S DGLLWGASKL+PVGYGIKKLQI CVVEDDKVGTD LEEEITKFED VQS+DVAAFNKI
Sbjct:  113 KAVEEVNGNA-KEEDDDIDLFGSDED-DGEAEKLREERVKAYSEKKAKKPVLIAKSSIVLDVKPWDDETDMAELEAKVRSVSMDGLLWGASKLLPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDHVQSVDVAAFNKI 251

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Yeast
Match: EFB1 (Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site; human homolog EEF1B2 can complement yeast efb1 mutants [Source:SGD;Acc:S000000003])

HSP 1 Score: 125.946 bits (315), Expect = 1.681e-36
Identity = 99/196 (50.51%), Postives = 128/196 (65.31%), Query Frame = 3

Query:   84 KLNDFLFNKSYINGYSPSTADVEVFQACGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVDLFGSDDEVDEEAE-RIKQERLDAYXXXXXXXXXXXXXXX-XXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            +LN  L +KSYI G + S ADV VF+A  S    Y    RWFNHI S ++E           A +EEDD+VDLFGSDDE  +    ++K ER+ AY AKK+ K A  A  S +TLDVKPWDDET++ E+   V++I  +GL WGA + +P+G+GIKKLQI CVVEDDKV  D L++ I + ED VQS D+AA  K+
Sbjct:   14 QLNASLADKSYIEGTAVSQADVTVFKAFQS---AYPEFSRWFNHIASKADEFDSFPAASAAAAEEEEDDDVDLFGSDDEEADAEAEKLKAERIAAYNAKKAAKPAKPAAKSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQSIEEDEDHVQSTDIAAMQKL 206

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Nematostella
Match: EDO25946 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8DVB0])

HSP 1 Score: 145.976 bits (367), Expect = 3.316e-45
Identity = 70/82 (85.37%), Postives = 75/82 (91.46%), Query Frame = 3

Query:  420 LDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LDVKPWDDETDMAE+EK VRSI ADGLLWGASKLVP+ YGIKKLQI  VVEDDK+ TDFLEEEI KFEDFVQS+D+AAFNKI
Sbjct:    9 LDVKPWDDETDMAEMEKLVRSIQADGLLWGASKLVPLAYGIKKLQITVVVEDDKISTDFLEEEICKFEDFVQSVDIAAFNKI 90

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Nematostella
Match: EDO31204 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SYL3])

HSP 1 Score: 125.176 bits (313), Expect = 4.824e-35
Identity = 76/123 (61.79%), Postives = 98/123 (79.67%), Query Frame = 3

Query:  300 LFGSDDEVDEEAER-IKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            LFGSDDE + E  R ++++RL  Y AKK+TK  +IAKS+I  DVKPWDDETD+ ELE  VRS++ DGLLWGASKLV + YG+KKLQI CV+ED KV TD L +++ +FEDF+QS+D+ +FNKI
Sbjct:  142 LFGSDDEEEAEEARQLREKRLAEYNAKKATKKPVIAKSNIIFDVKPWDDETDLKELENSVRSVAMDGLLWGASKLVEIAYGLKKLQITCVIEDAKVSTDDLIDKLCEFEDFIQSVDIVSFNKI 264

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Nematostella
Match: EDO33954 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQR0])

HSP 1 Score: 92.0485 bits (227), Expect = 2.044e-23
Identity = 73/153 (47.71%), Postives = 85/153 (55.56%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDCYF-HALRWFNHIKSFSE------EEKKAFRQVVKTAPKEEDDEVD----------LFGSDD-EVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDET 449
            M FG+LK   G S LN FL  +SYI GY PS AD  VF+A  S       HALRW+NHI S+ E       EKK+           E               LFGSDD E ++EA RI+QERL AY  KK+ K  +IAKS+I LDVKPWDDET
Sbjct:    1 MGFGDLKSQAGLSALNTFLTERSYIEGYVPSQADAVVFEALKSAPPASLPHALRWYNHIVSYGEGKQNFPGEKKSVESFGPAGAASEQKPAPADDNDDDEIDLFGSDDEEEEKEAARIRQERLKAYEEKKAKKKPVIAKSNIMLDVKPWDDET 153

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Medaka
Match: farsb (phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:101157145])

HSP 1 Score: 215.312 bits (547), Expect = 1.711e-64
Identity = 129/215 (60.00%), Postives = 152/215 (70.70%), Query Frame = 3

Query:   51 FGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDCYF-HALRWFNHIKSFSEEE-----KKAFRQVVKTAPKEE---DDEVDLFGSDDEVDE-EAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            FG+LK   G   LNDFL +KSY+ G+  S AD  VF A  S       H  RW+NHIKSF  E       K    ++   P  E   D+++DLFGS+DE +  E  RIK++RL  YAAKKS K A+IAKSSI LDVKPWDDETDM++LE+CVRS+  DGLLWG SKL+PVGYGIKKLQI CVVEDDKVGTD LEE IT FE++VQS+DVAAFNKI
Sbjct:  632 FGDLKSQEGLKALNDFLADKSYMEGFEASQADAAVFDAIPSTPTQTLQHLWRWYNHIKSFQTERVRLPATKTQFVLLNACPSSEHTSDEDIDLFGSEDEAESAETARIKEQRLAEYAAKKSKKPALIAKSSILLDVKPWDDETDMSKLEECVRSVRMDGLLWGQSKLLPVGYGIKKLQIACVVEDDKVGTDVLEEAITAFEEYVQSVDVAAFNKI 846

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Medaka
Match: eef1da (elongation factor 1-delta [Source:NCBI gene;Acc:101162958])

HSP 1 Score: 178.333 bits (451), Expect = 3.048e-55
Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = 3

Query:  303 FGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            FGSD+E DEEAERIKQERL+AYAAKK+ K A+IAKSSI LDVKPWDDETDMA+LE+CVRS+  DGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTD LEEEITKFEDFVQS+DVAAFNKI
Sbjct:  146 FGSDEE-DEEAERIKQERLEAYAAKKAKKPALIAKSSILLDVKPWDDETDMAKLEECVRSVQMDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDILEEEITKFEDFVQSVDVAAFNKI 265

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Medaka
Match: eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:NCBI gene;Acc:100049360])

HSP 1 Score: 174.866 bits (442), Expect = 5.740e-55
Identity = 113/207 (54.59%), Postives = 135/207 (65.22%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            M FG+LK   G   LNDFL ++S+I G       +  +   G               +   +     A +             +DLFGSD+E D EA ++K++RL  YAAKK+ K A+IAKSSI LDVKPWDDETDMA+LE+CVRSI  DGL+WG SKLVPVGYGIKKLQI CVVEDDKVGTD LEE+IT FED+VQSMDVAAFNKI
Sbjct:    1 MGFGDLKSSSGLKVLNDFLTDRSFIEGLPGVKKPLGQYGPTG---------------VADTTSSGPAASKDEDDDD-------IDLFGSDEEEDTEAAKLKEQRLAEYAAKKAKKPALIAKSSILLDVKPWDDETDMAKLEECVRSIQMDGLVWGQSKLVPVGYGIKKLQISCVVEDDKVGTDILEEQITAFEDYVQSMDVAAFNKI 185

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Medaka
Match: eef1da (elongation factor 1-delta [Source:NCBI gene;Acc:101162958])

HSP 1 Score: 181.8 bits (460), Expect = 1.079e-54
Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = 3

Query:  303 FGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            FGSD+E DEEAERIKQERL+AYAAKK+ K A+IAKSSI LDVKPWDDETDMA+LE+CVRS+  DGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTD LEEEITKFEDFVQS+DVAAFNKI
Sbjct:  321 FGSDEE-DEEAERIKQERLEAYAAKKAKKPALIAKSSILLDVKPWDDETDMAKLEECVRSVQMDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDILEEEITKFEDFVQSVDVAAFNKI 440

[Close]

BLAST of Elongation factor 1-beta vs. Ensembl Medaka
Match: eef1da (elongation factor 1-delta [Source:NCBI gene;Acc:101162958])

HSP 1 Score: 181.03 bits (458), Expect = 1.485e-54
Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = 3

Query:  303 FGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            FGSD+E DEEAERIKQERL+AYAAKK+ K A+IAKSSI LDVKPWDDETDMA+LE+CVRS+  DGLLWGASKLVPVGYGIKKLQI CVVEDDKVGTD LEEEITKFEDFVQS+DVAAFNKI
Sbjct:  297 FGSDEE-DEEAERIKQERLEAYAAKKAKKPALIAKSSILLDVKPWDDETDMAKLEECVRSVQMDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDILEEEITKFEDFVQSVDVAAFNKI 416

[Close]

BLAST of Elongation factor 1-beta vs. Planmine SMEST
Match: SMESG000026862.1 (SMESG000026862.1)

HSP 1 Score: 383.259 bits (983), Expect = 6.437e-137
Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 3

Query:   45 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVK APKEEDDEVDLFGSDDEVDEEAERIKQERLDAYAAKKSTKTAIIAKSSITLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI
Sbjct:    1 MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKAAPKEEDDEVDLFGSDDEVDEEAERIKQERLDAYAAKKSTKTAIIAKSSITLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 207

[Close]

BLAST of Elongation factor 1-beta vs. Planmine SMEST
Match: SMESG000020525.1 (SMESG000020525.1)

HSP 1 Score: 163.696 bits (413), Expect = 1.831e-51
Identity = 82/106 (77.36%), Postives = 90/106 (84.91%), Query Frame = 3

Query:   48 EFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDCYFHALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVDLFGSDDEVDEEAERIKQERLDA 365
            EF NL IDIGQSKLN+F+FNKSYING S STAD+EVFQA GSI+DCYF+ALRWFNHIKSFSE+EKKAFRQVVK APKEE         DDEV+E+AE IKQERLDA
Sbjct:   30 EFSNLTIDIGQSKLNNFIFNKSYINGCSQSTADIEVFQARGSIRDCYFYALRWFNHIKSFSEDEKKAFRQVVKAAPKEE---------DDEVNEKAELIKQERLDA 126

[Close]

BLAST of Elongation factor 1-beta vs. Planmine SMEST
Match: SMESG000081496.1 (SMESG000081496.1)

HSP 1 Score: 167.933 bits (424), Expect = 2.501e-51
Identity = 98/128 (76.56%), Postives = 113/128 (88.28%), Query Frame = 3

Query:  282 EDDEVDLFGSDDEVDEEAERIKQERLDAYXXXXXXXXXXXXXXXXXLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNKI 665
            ++D+VDLFGSDDE D+E E++K+ER+  Y  KKSTK  IIAKS+I LDVKPWDDETDMAELEK VRSI  DGLLWG+SKLVP+ YGIKKLQI CVVEDDKVGTDFLEE+IT+FED VQS+D+AAFNKI
Sbjct:  131 DEDDVDLFGSDDEEDDENEKLKEERIQMYNQKKSTKAVIIAKSNIILDVKPWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNKI 258

The following BLAST results are available for this feature:

BLAST of Elongation factor 1-beta vs. Ensembl Human
BLAST of Elongation factor 1-beta vs. Ensembl Celegans
BLAST of Elongation factor 1-beta vs. Ensembl Fly
BLAST of Elongation factor 1-beta vs. Ensembl Zebrafish
BLAST of Elongation factor 1-beta vs. Ensembl Xenopus
BLAST of Elongation factor 1-beta vs. Ensembl Mouse
BLAST of Elongation factor 1-beta vs. UniProt/SwissProt
BLAST of Elongation factor 1-beta vs. TrEMBL
BLAST of Elongation factor 1-beta vs. Ensembl Cavefish
BLAST of Elongation factor 1-beta vs. Ensembl Sea Lamprey
BLAST of Elongation factor 1-beta vs. Ensembl Yeast
BLAST of Elongation factor 1-beta vs. Ensembl Nematostella
BLAST of Elongation factor 1-beta vs. Ensembl Medaka
BLAST of Elongation factor 1-beta vs. Planmine SMEST

BLAST of Elongation factor 1-beta vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
EEF1B2	4.718e-72	60.62	eukaryotic translation elongation factor 1 beta 2 ...	[more]
EEF1B2	4.718e-72	60.62	eukaryotic translation elongation factor 1 beta 2 ...	[more]
EEF1B2	4.718e-72	60.62	eukaryotic translation elongation factor 1 beta 2 ...	[more]
EEF1B2	4.718e-72	60.62	eukaryotic translation elongation factor 1 beta 2 ...	[more]
EEF1B2	4.718e-72	60.62	eukaryotic translation elongation factor 1 beta 2 ...	[more]

BLAST of Elongation factor 1-beta vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3


Match Name	E-value	Identity	Description
eef-1B.1	6.549e-47	48.34	Probable elongation factor 1-beta/1-delta 1 [Sour...	[more]
eef-1B.2	5.349e-33	69.88	Probable elongation factor 1-beta/1-delta 2 [Sour...	[more]
eef-1B.2	5.349e-33	69.88	Probable elongation factor 1-beta/1-delta 2 [Sour...	[more]

BLAST of Elongation factor 1-beta vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 4


Match Name	E-value	Identity	Description
eEF1beta	1.803e-60	58.56	gene:FBgn0028737 transcript:FBtr0332947	[more]
eEF1beta	1.803e-60	58.56	gene:FBgn0028737 transcript:FBtr0345627	[more]
eEF1delta	1.303e-39	69.11	gene:FBgn0032198 transcript:FBtr0079952	[more]
eEF1delta	1.331e-39	69.11	gene:FBgn0032198 transcript:FBtr0079951	[more]

BLAST of Elongation factor 1-beta vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
eef1b2	2.928e-68	62.22	eukaryotic translation elongation factor 1 beta 2 ...	[more]
eef1da	3.062e-55	78.69	eukaryotic translation elongation factor 1 delta a...	[more]
eef1da	1.862e-54	78.69	eukaryotic translation elongation factor 1 delta a...	[more]
eef1db	3.239e-50	81.97	eukaryotic translation elongation factor 1 delta b...	[more]
eef1db	4.154e-50	81.97	eukaryotic translation elongation factor 1 delta b...	[more]

BLAST of Elongation factor 1-beta vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
eef1b2	6.748e-72	60.70	eukaryotic translation elongation factor 1 beta 2 ...	[more]
ENSXETT00000033558.1	7.574e-51	71.13	eukaryotic translation elongation factor 1 delta (...	[more]
ENSXETT00000019492.1	1.316e-50	71.13	eukaryotic translation elongation factor 1 delta (...	[more]
ENSXETT00000019482.1	1.493e-50	71.13	eukaryotic translation elongation factor 1 delta (...	[more]
ENSXETT00000033553.1	1.120e-47	71.13	eukaryotic translation elongation factor 1 delta (...	[more]

BLAST of Elongation factor 1-beta vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Eef1b2	4.529e-71	59.73	eukaryotic translation elongation factor 1 beta 2 ...	[more]
Eef1b2	5.447e-51	50.23	eukaryotic translation elongation factor 1 beta 2 ...	[more]
Eef1d	1.325e-50	64.56	eukaryotic translation elongation factor 1 delta (...	[more]
Eef1d	5.112e-50	71.54	eukaryotic translation elongation factor 1 delta (...	[more]
Eef1d	5.112e-50	71.54	eukaryotic translation elongation factor 1 delta (...	[more]

BLAST of Elongation factor 1-beta vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P12262\|EF1B_ARTSA	1.442e-76	61.76	Elongation factor 1-beta OS=Artemia salina OX=8554...	[more]
sp\|P30151\|EF1B_XENLA	2.932e-76	60.79	Elongation factor 1-beta OS=Xenopus laevis OX=8355...	[more]
sp\|Q9YGQ1\|EF1B_CHICK	3.519e-73	61.06	Elongation factor 1-beta OS=Gallus gallus OX=9031 ...	[more]
sp\|P24534\|EF1B_HUMAN	2.266e-71	60.62	Elongation factor 1-beta OS=Homo sapiens OX=9606 G...	[more]
sp\|Q6DET9\|EF1B_XENTR	2.906e-71	60.70	Elongation factor 1-beta OS=Xenopus tropicalis OX=...	[more]

BLAST of Elongation factor 1-beta vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1I8JDA2	2.005e-82	67.61	Uncharacterized protein OS=Macrostomum lignano OX=...	[more]
A0A267EEA2	2.467e-82	67.61	Uncharacterized protein OS=Macrostomum lignano OX=...	[more]
A0A5N4A7S9	2.172e-76	61.93	Uncharacterized protein OS=Photinus pyralis OX=705...	[more]
A0A1I8H1D8	2.905e-76	67.15	Uncharacterized protein OS=Macrostomum lignano OX=...	[more]
Q3B8I6	1.806e-75	61.67	Wu:fj06d02 protein OS=Xenopus laevis OX=8355 GN=wu...	[more]

BLAST of Elongation factor 1-beta vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
eef1b2	3.866e-74	61.50	eukaryotic translation elongation factor 1 beta 2 ...	[more]
eef1b2	3.866e-74	61.50	eukaryotic translation elongation factor 1 beta 2 ...	[more]
eef1db	4.075e-59	83.61	eukaryotic translation elongation factor 1 delta [...	[more]
eef1db	1.840e-56	83.61	eukaryotic translation elongation factor 1 delta [...	[more]
eef1da	2.994e-56	83.61	eukaryotic translation elongation factor 1 delta a...	[more]

BLAST of Elongation factor 1-beta vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
ENSPMAT00000008426.1	4.399e-57	74.47	pep scaffold:Pmarinus_7.0:GL501239:13751:22054:1 g...	[more]

BLAST of Elongation factor 1-beta vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
EFB1	1.681e-36	50.51	Translation elongation factor 1 beta; stimulates n...	[more]

BLAST of Elongation factor 1-beta vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 3


Match Name	E-value	Identity	Description
EDO25946	3.316e-45	85.37	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8...	[more]
EDO31204	4.824e-35	61.79	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO33954	2.044e-23	47.71	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Elongation factor 1-beta vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
farsb	1.711e-64	60.00	phenylalanyl-tRNA synthetase subunit beta [Source:...	[more]
eef1da	3.048e-55	86.78	elongation factor 1-delta [Source:NCBI gene;Acc:10...	[more]
eef1b2	5.740e-55	54.59	eukaryotic translation elongation factor 1 beta 2 ...	[more]
eef1da	1.079e-54	86.78	elongation factor 1-delta [Source:NCBI gene;Acc:10...	[more]
eef1da	1.485e-54	86.78	elongation factor 1-delta [Source:NCBI gene;Acc:10...	[more]

BLAST of Elongation factor 1-beta vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000026862.1	6.437e-137	99.52	SMESG000026862.1	[more]
SMESG000020525.1	1.831e-51	77.36	SMESG000020525.1	[more]
SMESG000081496.1	2.501e-51	76.56	SMESG000081496.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30001172 ID=SMED30001172|Name=Elongation factor 1-beta|organism=Schmidtea mediterranea sexual|type=transcript|length=713bp
TTTTGTTTTAAAAATTAGATTTACTTTTGTTTTTTAAATTGAAAATGGAA
TTTGGAAATCTTAAAATTGATATCGGTCAATCCAAATTGAACGATTTTCT
CTTTAATAAGAGTTATATTAATGGATATTCTCCATCAACTGCTGATGTTG
AAGTATTTCAAGCATGTGGATCAATTAAAGATTGCTATTTTCATGCTTTA
AGATGGTTTAACCACATTAAATCTTTCTCGGAAGAAGAAAAGAAAGCATT
TCGCCAAGTAGTTAAAACAGCCCCAAAAGAAGAAGATGATGAAGTTGATT
TATTTGGATCTGATGATGAAGTTGACGAAGAAGCTGAACGCATCAAACAA
GAAAGATTAGATGCATATGCTGCCAAAAAGTCAACAAAAACTGCTATTAT
AGCCAAATCAAGTATCACATTAGATGTTAAACCATGGGATGATGAAACTG
ATATGGCTGAATTGGAAAAGTGTGTCAGATCCATAAGTGCTGATGGTTTA
TTGTGGGGTGCATCTAAGTTGGTTCCAGTTGGTTACGGAATTAAAAAGTT
GCAAATCATCTGTGTTGTTGAAGATGACAAAGTTGGTACTGATTTCCTCG
AAGAAGAAATTACCAAATTTGAAGATTTTGTACAATCAATGGACGTAGCA
GCTTTCAACAAAATCTAAATTTTTAGCCATTTTGGAATTTTGAATAAAGC
AATTGTTATTTTC

protein sequence of SMED30001172-orf-1

>SMED30001172-orf-1 ID=SMED30001172-orf-1|Name=SMED30001172-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=208bp
MEFGNLKIDIGQSKLNDFLFNKSYINGYSPSTADVEVFQACGSIKDCYFH
ALRWFNHIKSFSEEEKKAFRQVVKTAPKEEDDEVDLFGSDDEVDEEAERI
KQERLDAYAAKKSTKTAIIAKSSITLDVKPWDDETDMAELEKCVRSISAD
GLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMD
VAAFNKI*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000028	Category 2 cell
PLANA:0000429	neoblast
PLANA:0002032	epidermal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR036282	Glutathione-S-Trfase_C_sf
IPR036219	eEF-1beta-like_sf
IPR018940	EF-1_beta_acid_region_euk
IPR014038	EF1B_bsu/dsu_GNE
IPR014717	Transl_elong_EF1B/ribosomal_S6
IPR001326	Transl_elong_EF1B_B/D_CS
IPR010987	Glutathione-S-Trfase_C-like

Vocabulary: **molecular function**
Term	Definition
GO:0003746	translation elongation factor activity

Vocabulary: **biological process**
Term	Definition
GO:0006414	translational elongation
GO:0006412	translation

Vocabulary: **cellular component**
Term	Definition
GO:0005853	eukaryotic translation elongation factor 1 complex

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018940	Elongation factor 1 beta central acidic region, eukaryote	SMART	SM01182	EF-1_beta_acid_2	coord: 86..112 e-value: 1.7E-5 score: 34.2
IPR018940	Elongation factor 1 beta central acidic region, eukaryote	PFAM	PF10587	EF-1_beta_acid	coord: 86..112 e-value: 1.4E-13 score: 51.0
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	SMART	SM00888	EF1_GNE_2	coord: 121..207 e-value: 6.8E-45 score: 165.1
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	PFAM	PF00736	EF1_GNE	coord: 123..207 e-value: 1.4E-35 score: 121.3
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	CDD	cd00292	EF1B	coord: 119..207 e-value: 1.95672E-43 score: 138.498
IPR014717	Translation elongation factor EF1B/ribosomal protein S6	GENE3D	G3DSA:3.30.70.60		coord: 117..207 e-value: 8.6E-47 score: 159.2
None	No IPR available	PANTHER	PTHR11595:SF21	ELONGATION FACTOR 1-BETA	coord: 1..207
None	No IPR available	PANTHER	PTHR11595	ELONGATION FACTOR 1-BETA	coord: 1..207
IPR001326	Translation elongation factor EF1B, beta/delta chains, conserved site	PROSITE	PS00825	EF1BD_2	coord: 196..207
IPR001326	Translation elongation factor EF1B, beta/delta chains, conserved site	PROSITE	PS00824	EF1BD_1	coord: 80..88
IPR036282	Glutathione S-transferase, C-terminal domain superfamily	SUPERFAMILY	SSF47616	GST C-terminal domain-like	coord: 14..62
IPR036219	Translation elongation factor eEF-1beta-like superfamily	SUPERFAMILY	SSF54984	eEF-1beta-like	coord: 119..207