NudC nuclear distribution protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30001081 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of NudC nuclear distribution protein vs. Ensembl Human
Match: NUDC (nuclear distribution C, dynein complex regulator [Source:HGNC Symbol;Acc:HGNC:8045]) HSP 1 Score: 315.464 bits (807), Expect = 8.185e-106 Identity = 172/325 (52.92%), Postives = 240/325 (73.85%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQK--QSIAXXXXXXXXXXXXXXXXXXXXXXXIKKIQDNEPRVVELTNEEAEKMQAEID----AEKH----KDMEVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 ++FD + L++AQQ EGG++EL+N FF FL R+TDFF G + A K++T F H + Q + + ++E E ++K ++ + ++ K + + P++ ELT+EEAE++Q EID AE H K+ +D + EED +ED KDKGKLKPN GNGADLP +W Q+L ++D+ +P VNF +K +D++V+IQ++++ V LKG +++G LYN++KVEES+W IEDGKV+ + LEK+N+MEWW+R+ PEINTKK+NPENSKLSDLD ETRSMVEKMMYDQRQK MGLPTS++QKKQ++L+KFM QHPEMDFSK KFN Sbjct: 8 ERFDGMLLAMAQQ-HEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFSHHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 331
BLAST of NudC nuclear distribution protein vs. Ensembl Human
Match: NUDCD3 (NudC domain containing 3 [Source:HGNC Symbol;Acc:HGNC:22208]) HSP 1 Score: 85.5001 bits (210), Expect = 5.956e-18 Identity = 49/158 (31.01%), Postives = 88/158 (55.70%), Query Frame = 1 Query: 472 PNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSL---KGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQK 936 P+ NGA W Q D+++R+P + VK + V V + I V++ G + L+EG L + I E S W++E GK + ++L KV + WWN + + + I+ K+N E S ++ +D E +++++++ +D QK G P S + K ++L+K Sbjct: 179 PDSYNGAVRENYTWSQDYTDLEVRVPVPKHV-VKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSKVGEY-WWNAILEGEEPIDIDKINKERS-MATVDEEEQAVLDRLTFDYHQKLQGKPQSHELKVHEMLKK 333
BLAST of NudC nuclear distribution protein vs. Ensembl Human
Match: NUDC (nuclear distribution C, dynein complex regulator [Source:HGNC Symbol;Acc:HGNC:8045]) HSP 1 Score: 75.8702 bits (185), Expect = 1.356e-15 Identity = 63/155 (40.65%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 103 LLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIK--KIQDNEPRVVELTNEEAEKMQAEID----AEKH----KDMEVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVD 537 L+N FF FL R+TDFF G + A K++T F H + + +++ +E + + K + K K + + P++ ELT+EEAE++Q EID AE H K+ +D + EED +ED KDKGKLKPN GNGADLP +W Q+L ++D Sbjct: 32 LVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFSHHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELD 186
BLAST of NudC nuclear distribution protein vs. Ensembl Human
Match: NUDC (nuclear distribution C, dynein complex regulator [Source:HGNC Symbol;Acc:HGNC:8045]) HSP 1 Score: 54.299 bits (129), Expect = 1.446e-8 Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 319 PRVVELTNEEAEKMQAEID----AEKH----KDMEVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVD 537 P++ ELT+EEAE++Q EID AE H K+ +D + EED +ED KDKGKLKPN GNGADLP +W Q+L ++D Sbjct: 53 PQIKELTDEEAERLQLEIDQKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELD 133
BLAST of NudC nuclear distribution protein vs. Ensembl Human
Match: NUDCD2 (NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]) HSP 1 Score: 48.521 bits (114), Expect = 2.225e-6 Identity = 37/162 (22.84%), Postives = 77/162 (47.53%), Query Frame = 1 Query: 499 PECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 P +W Q+L++V I + +V +++D+ +Q +++++S+ G + +L+G L++ +E TWT+ED K++ + L K K + N S L E+ + + DQ Q+++ L++F ++P DFS + + Sbjct: 17 PWGQWYQTLEEVFIEV--QVPPGTRAQDIQCGLQSRHVALSVGGRE-ILKGKLFDSTIADEGTWTLEDRKMVRIVLTKT-------------------KRDAANCWTSLL--ESEYAADPWVQDQMQRKL------------TLERFQKENPGFDFSGAEIS 142
BLAST of NudC nuclear distribution protein vs. Ensembl Celegans
Match: nud-1 (Aspergillus NUclear Division related; NUD-1 [Source:UniProtKB/TrEMBL;Acc:G5EE74]) HSP 1 Score: 279.256 bits (713), Expect = 3.508e-92 Identity = 146/317 (46.06%), Postives = 218/317 (68.77%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIKKIQD--NEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 ++FD++ LS+AQQ GG+ E+L+ F FL R+TDF+ G ++A ++ + F+ H +++ + + KK +EE+++ ++ ++ K ++ +VVE+T+EEA + E +++E + E + +D + + +D +KPN GNGADL + +W Q+L++++++IP F +KSRDV+V I+K +SV LK P+++G L + IKVE W IE+GK I L+LEK+N MEWWNR D P INTK+V PENSKLSDLDGETR+MVEKMMYDQRQKEMGLPTS+++KK D+LQ+FM QHPEMDFS K Sbjct: 5 ERFDSVLLSMAQQLS-GGVPEMLDVLFEFLSRKTDFYSGAGVDQARTLLLEKFDKHGGKAMKEAEEAKKRKEEQERKLAERRAAQKAKEEEEFRNAKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADLAKYQWTQTLQELEVKIPIAAGFAIKSRDVVVKIEKTSVSVGLKNQAPIVDGKLPHAIKVENCNWVIENGKAIVLTLEKINDMEWWNRFLDSDPPINTKEVKPENSKLSDLDGETRAMVEKMMYDQRQKEMGLPTSDEKKKHDMLQQFMKQHPEMDFSNAKIG 320
BLAST of NudC nuclear distribution protein vs. Ensembl Fly
Match: nudC (gene:FBgn0021768 transcript:FBtr0075328) HSP 1 Score: 259.61 bits (662), Expect = 2.631e-84 Identity = 145/329 (44.07%), Postives = 218/329 (66.26%), Query Frame = 1 Query: 43 KFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIK----KIQDNEPRVVELTNEEAEKMQAEIDAEKHKDM-----------EVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 KFDN+ L++A++ GG+ E L FL R+TDFF G + E K++ D F K ++ ++ ++ K RE +LK K+ +E K +I DN ++ ++T+EEA + E + +K + + D + E+ D + D + GKL PN GNG L W Q+L++V+++IP + F +++RD++++I KK + V +KG P+++G L ++K EES W ++D K + ++L+K+N+M WW+R+ PEI+T+K+NPE+SKLSDLDGETRSMVEKMMYDQRQKE+GLPTSED+KKQD+L+KF QHPEMDFSKCKFN Sbjct: 7 KFDNILLAVAEK-HHGGVPEFLGTLASFLRRKTDFFTGAKQTEWEKLLLDVFNKESKLAVTENYEKIKAREASQRLKAEKERAERKARKQEIDDN--KICDITDEEAAAIIKEEETKKRQQLLDSAGGEPSASNRDGISKPIEKVDDESDKSELGKLMPNAGNGCTLENYTWTQTLEEVELKIPFNLTFGLRARDLVISIGKKSLKVGIKGQTPIIDGELCGEVKTEESVWVLQDSKTVMITLDKINKMNWWSRLVTTDPEISTRKINPESSKLSDLDGETRSMVEKMMYDQRQKELGLPTSEDRKKQDILEKFKQQHPEMDFSKCKFN 332
BLAST of NudC nuclear distribution protein vs. Ensembl Fly
Match: nudC (gene:FBgn0021768 transcript:FBtr0305912) HSP 1 Score: 259.61 bits (662), Expect = 2.631e-84 Identity = 145/329 (44.07%), Postives = 218/329 (66.26%), Query Frame = 1 Query: 43 KFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIK----KIQDNEPRVVELTNEEAEKMQAEIDAEKHKDM-----------EVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 KFDN+ L++A++ GG+ E L FL R+TDFF G + E K++ D F K ++ ++ ++ K RE +LK K+ +E K +I DN ++ ++T+EEA + E + +K + + D + E+ D + D + GKL PN GNG L W Q+L++V+++IP + F +++RD++++I KK + V +KG P+++G L ++K EES W ++D K + ++L+K+N+M WW+R+ PEI+T+K+NPE+SKLSDLDGETRSMVEKMMYDQRQKE+GLPTSED+KKQD+L+KF QHPEMDFSKCKFN Sbjct: 7 KFDNILLAVAEK-HHGGVPEFLGTLASFLRRKTDFFTGAKQTEWEKLLLDVFNKESKLAVTENYEKIKAREASQRLKAEKERAERKARKQEIDDN--KICDITDEEAAAIIKEEETKKRQQLLDSAGGEPSASNRDGISKPIEKVDDESDKSELGKLMPNAGNGCTLENYTWTQTLEEVELKIPFNLTFGLRARDLVISIGKKSLKVGIKGQTPIIDGELCGEVKTEESVWVLQDSKTVMITLDKINKMNWWSRLVTTDPEISTRKINPESSKLSDLDGETRSMVEKMMYDQRQKELGLPTSEDRKKQDILEKFKQQHPEMDFSKCKFN 332
BLAST of NudC nuclear distribution protein vs. Ensembl Fly
Match: CG31251 (gene:FBgn0051251 transcript:FBtr0083484) HSP 1 Score: 67.3958 bits (163), Expect = 2.852e-12 Identity = 46/140 (32.86%), Postives = 82/140 (58.57%), Query Frame = 1 Query: 466 LKPNEGNGADLPECK-WVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQP---LLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQ 873 P++ D+ E W Q+LKDV+++ + ++ + ++IQ ++I VS K H P +LEG L IK +E+ WTI+ ++I +S +K ++ WW+R+ + PEI++KK+ E + DL ET++ +EK+ Q Sbjct: 124 FSPSDYKNGDVFETHCWSQTLKDVEVQALLPKDHQT-AKKLHISIQAQHIKVSSK-HSPETIILEGNLSQRIKHKEAVWTIDQNRLI-ISYDKAKEL-WWDRLFEGDPEIDSKKIECERY-IDDLPEETQATIEKLRVQQ 258
BLAST of NudC nuclear distribution protein vs. Ensembl Zebrafish
Match: nudc (nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]) HSP 1 Score: 320.087 bits (819), Expect = 9.504e-108 Identity = 170/330 (51.52%), Postives = 238/330 (72.12%), Query Frame = 1 Query: 37 NDKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXX------XIKKIQDNEPRVVELTNEEAEKMQAEIDA--EKHKDMEV------DIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 +++FD + L++AQQ EGG++EL+N FF FL R+TDFF G K+V +AF H + ++ +++ +E++ K K + + +KI EPR+ ELT+EEAE++Q+++ E+ K+ EV D K + + + +ED KDK K+KPN GNGADLP +W QSL +VD+ +P V+F +K +DV+V++Q++ + V LKGH PL++G L+N++KVEES+W IEDGKV+ + EK+N+MEWWN++ PEINTKK+ PENSKLSDLDGETRSMVEKMMYDQRQK MGLPTSE+QKKQD+L+KFM QHPEMDFSK KF+ Sbjct: 5 DERFDGMLLAMAQQ-HEGGVQELVNTFFSFLRRKTDFFTGGESGAPEKLVKEAFAHHNQLALQVQKEKQSRQEKERKEKAERAAKLKEEEMKKRKIDAEEPRIKELTDEEAERLQSQLQTKQEEQKNSEVAEKTDADSKDKKGSDSEGEEDEKDKDKVKPNAGNGADLPNYRWTQSLSEVDLVVPFDVSFRLKGKDVVVDVQRRTLKVGLKGHPPLIDGQLFNEVKVEESSWLIEDGKVVTIHFEKINKMEWWNKLVTTDPEINTKKICPENSKLSDLDGETRSMVEKMMYDQRQKSMGLPTSEEQKKQDILKKFMAQHPEMDFSKAKFS 333
BLAST of NudC nuclear distribution protein vs. Ensembl Zebrafish
Match: nudcd3 (NudC domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2255]) HSP 1 Score: 86.6557 bits (213), Expect = 1.249e-18 Identity = 49/154 (31.82%), Postives = 88/154 (57.14%), Query Frame = 1 Query: 484 NGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLK---GHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQK 936 NGA + W Q DV++R+ + + +K R V V++Q +SVS+ + LL+G + I E S W++E G+ + LSL K +++ WW+ V + EI+ ++N E S ++ +D E ++++++ +D QK G P S + K D+L+K Sbjct: 166 NGAVREKYTWSQDYTDVEVRVHVEPDI-IKGRQVCVDLQSSRVSVSVADGGSRKVLLDGEFTHRINTENSLWSLEPGRCVLLSLSKCSEV-WWSAVLKGEAEIDVNQINRERS-MATVDEEEHAVLDRLTFDYHQKLQGKPQSHEMKVHDMLKK 316
BLAST of NudC nuclear distribution protein vs. Ensembl Zebrafish
Match: nudcd2 (NudC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-49]) HSP 1 Score: 46.595 bits (109), Expect = 7.377e-6 Identity = 41/155 (26.45%), Postives = 71/155 (45.81%), Query Frame = 1 Query: 511 WVQSLKDVDIRIPTKVNFP--VKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFS 969 W Q++++V I +VN P ++++ NI K I + +K Q + +G L+ +E+TWT+ED K+I + L K N+ N S L+GE M + + DQ Q+++ L++F ++P DFS Sbjct: 21 WYQTMEEVYI----EVNVPPGTSAKEIKCNIGSKQIELRVKDQQ-IFKGKLFGSTVCDEATWTLEDKKLIRIVLMKTNR-------------------EAGNCWQSLLEGEF--MADPWVQDQMQRKL------------TLERFQRENPGFDFS 137
BLAST of NudC nuclear distribution protein vs. Ensembl Zebrafish
Match: nudcd2 (NudC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-49]) HSP 1 Score: 46.595 bits (109), Expect = 7.377e-6 Identity = 41/155 (26.45%), Postives = 71/155 (45.81%), Query Frame = 1 Query: 511 WVQSLKDVDIRIPTKVNFP--VKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFS 969 W Q++++V I +VN P ++++ NI K I + +K Q + +G L+ +E+TWT+ED K+I + L K N+ N S L+GE M + + DQ Q+++ L++F ++P DFS Sbjct: 21 WYQTMEEVYI----EVNVPPGTSAKEIKCNIGSKQIELRVKDQQ-IFKGKLFGSTVCDEATWTLEDKKLIRIVLMKTNR-------------------EAGNCWQSLLEGEF--MADPWVQDQMQRKL------------TLERFQRENPGFDFS 137
BLAST of NudC nuclear distribution protein vs. Ensembl Xenopus
Match: klf11 (Kruppel-like factor 11 [Source:Xenbase;Acc:XB-GENE-956858]) HSP 1 Score: 317.775 bits (813), Expect = 8.414e-107 Identity = 171/325 (52.62%), Postives = 240/325 (73.85%), Query Frame = 1 Query: 37 NDKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIKKIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEV---------DIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 +++FD + L++AQQ EGG++EL+N FF FL R+TDFF G A K++T AF H K ++A ++ +R E++ +++ ++ + K+ + E R+ ELT+EEAE++Q EID K K+ + E ++EE+ ++D KDKGKLKPN GNGA+LP +W Q+L +VD+ +P V+F +K +DV V+I++ +++ L+G +P+L+G L+NDIKVEE +W IEDGKV+ + LEK+N MEWW+RV PEINTKK+NPENSKLSDLDGETRSMVEKMMYDQRQK MGLPTS++QKKQD+L+KFM QHPEMDFSK KF+ Sbjct: 7 DERFDAMLLAMAQQ-HEGGVQELVNTFFSFLRRKTDFFVGGENAAAEKLITQAFNHHNKLALAAQKQKDADRLEREAVRQEREAKK-KETEAGESRITELTDEEAERLQKEIDKNKEKEKATRETEEKPEPEKDGEEEKEEEEEDDEKDKGKLKPNSGNGANLPHYRWTQTLSEVDLVVPFPVSFRLKGKDVQVDIKRHRLTIGLRGQKPVLDGELFNDIKVEECSWLIEDGKVVTVHLEKINTMEWWSRVVLTDPEINTKKINPENSKLSDLDGETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFS 329
BLAST of NudC nuclear distribution protein vs. Ensembl Xenopus
Match: nudcd3 (NudC domain containing 3 [Source:NCBI gene;Acc:548495]) HSP 1 Score: 89.7373 bits (221), Expect = 1.821e-19 Identity = 51/158 (32.28%), Postives = 91/158 (57.59%), Query Frame = 1 Query: 472 PNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLK---GHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQK 936 P+ NGA W Q DV+I++P + +K R V V+++ I V+++ G + L+EG+ + I E S W++E GK I +SL K ++ WWN V + + +I+ K+N E S ++ +D E ++++++ +D QK G P S + K ++L+K Sbjct: 164 PDSYNGAIRKNYVWSQDYTDVEIKVPVPKSV-IKGRQVSVDLRSSCIRVAVREGGGERVLVEGSFTHKINAETSLWSLEPGKCIVISLSKCGEV-WWNAVLEDEEKIDIDKINKERS-MATVDDEEHAVLDRLTFDYHQKLQGKPQSHELKVHEMLKK 318
BLAST of NudC nuclear distribution protein vs. Ensembl Mouse
Match: Nudc (nudC nuclear distribution protein [Source:MGI Symbol;Acc:MGI:106014]) HSP 1 Score: 316.62 bits (810), Expect = 2.021e-106 Identity = 171/326 (52.45%), Postives = 237/326 (72.70%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIK--KIQDNEPRVVELTNEEAEKMQAEIDAEK-HKDMEVDIXXXX--------XXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 ++FD + L++AQQ EGG++EL+N FF FL R+TDFF G + A K++T F H + + +++ +E + + K + K K + P++ ELT+EEAE++Q EID +K +D E +K E+E+ +ED KDKGKLKPN GNGADLP +W Q+L ++D+ +P +V+F +K +DV+V+IQ++++ V LKG P+++G LYN++KVEES+W IEDGKV+ + LEK+N+MEWWNR+ PEINTKK+NPENSKLSDLD ETRSMVEKMMYDQRQK MGLPTS++QKKQ++L+KFM QHPEMDFSK KFN Sbjct: 8 ERFDGMLLAMAQQ-HEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFNHHNQLAQKARREKRARQETERREKAERAARLAKEAKAETPGPQIKELTDEEAERLQLEIDQKKDAEDQEAQLKNGSLDSPGKQDAEDEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332
BLAST of NudC nuclear distribution protein vs. Ensembl Mouse
Match: Nudcd3 (NudC domain containing 3 [Source:MGI Symbol;Acc:MGI:2144158]) HSP 1 Score: 80.1073 bits (196), Expect = 3.100e-16 Identity = 46/158 (29.11%), Postives = 88/158 (55.70%), Query Frame = 1 Query: 472 PNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSL---KGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQK 936 P+ NGA W Q D+++R+P + +K + V V + I V++ G + L+EG L + I E S W++E G+ + ++L KV + WW+ + + + I+ K+N E S ++ +D E +++++++ +D QK G P S + K ++L+K Sbjct: 181 PDSYNGAIRENYIWSQDYTDLEVRVPVPKHV-MKGKQVSVALSSGTIRVAMVEENGERVLMEGKLTHKINTESSLWSLEPGRCVLVNLSKVGEY-WWSAILEGEEPIDIDKINKERS-MATVDEEEQAVLDRLTFDYHQKLQGKPQSHELKVHEMLKK 335
BLAST of NudC nuclear distribution protein vs. Ensembl Mouse
Match: Nudcd2 (NudC domain containing 2 [Source:MGI Symbol;Acc:MGI:1277103]) HSP 1 Score: 47.7506 bits (112), Expect = 3.248e-6 Identity = 36/157 (22.93%), Postives = 75/157 (47.77%), Query Frame = 1 Query: 499 PECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFS 969 P +W Q+L++V I + +V +++D+ +Q +++++++ G + +L+G L++ +E TWT+ED K++ + L K K + N S L E+ + + DQ Q+++ L++F ++P DFS Sbjct: 17 PWGQWYQTLEEVFIEV--QVPPGTRAQDIQCGLQSRHVALAVGGRE-ILKGKLFDSTIADEGTWTLEDRKMVRIVLTKT-------------------KRDAANCWTSLL--ESEYAADPWVQDQMQRKL------------TLERFQKENPGFDFS 137
BLAST of NudC nuclear distribution protein vs. UniProt/SwissProt
Match: sp|Q5ZIN1|NUDC_CHICK (Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 1.183e-109 Identity = 175/330 (53.03%), Postives = 235/330 (71.21%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIK--KIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVD-------------IXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 D+FD + L++AQQ +GG+ EL+N FF FL R+TDFF G A K++TD+F H K + + ++K +E + + K + K K + NEPR+ ELT+EEAE++Q EID +K EV+ +E +D ++D DKGKLKPN GNGADLP +W Q+L ++D+ IP KV F +K +DV+V+IQ++ + V LKGH P+++G L+N++KVEES+W IEDGK + + LEK+N+MEWWN++ PEINTKK+NPENSKLSDLD ETRSMVEKMMYDQRQK MGLPTS++QKKQD+L+KFM QHPEMDFSK KFN Sbjct: 13 DRFDGILLAMAQQ-HQGGVCELVNTFFSFLRRKTDFFTGGEDGVAEKLITDSFNHHNKLAQKERKEKKARQEAERREKAERAAKLAKEAKQEANEPRIKELTDEEAERLQLEIDQKKEAQKEVNNVPVKSSEDDGDSSDSNKQETDDEEKDENDKGKLKPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQRRRLRVGLKGHPPVIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN 341
BLAST of NudC nuclear distribution protein vs. UniProt/SwissProt
Match: sp|Q63525|NUDC_RAT (Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 7.203e-106 Identity = 173/326 (53.07%), Postives = 238/326 (73.01%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIK--KIQDNEPRVVELTNEEAEKMQAEID----AEKH----KDMEVDI-XXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 ++FD + L++AQQ EGG++EL+N FF FL R+TDFF G + A K++T F H + + +++ +E + + K + K K + P++ ELT+EEAE++Q EID AE H K+ +D + EEE+ +ED KDKGKLKPN GNGADLP +W Q+L ++D+ +P +V+F +K +DV+V+IQ++++ V LKG P+++G LYN++KVEES+W IEDGKV+ + LEK+N+MEWWNR+ PEINTKK+NPENSKLSDLD ETRSMVEKMMYDQRQK MGLPTS++QKKQ++L+KFM QHPEMDFSK KFN Sbjct: 8 ERFDGMLLAMAQQ-HEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFNHHNQLAQKARREKRARQETERREKAERAARLAKEAKAETPGPQIKELTDEEAERLQLEIDQKKDAENHEVQLKNGSLDSPGKQDAEEEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQAPVIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332
BLAST of NudC nuclear distribution protein vs. UniProt/SwissProt
Match: sp|O35685|NUDC_MOUSE (Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 1.414e-105 Identity = 171/326 (52.45%), Postives = 237/326 (72.70%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIK--KIQDNEPRVVELTNEEAEKMQAEIDAEK-HKDMEVDIXXXX--------XXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 ++FD + L++AQQ EGG++EL+N FF FL R+TDFF G + A K++T F H + + +++ +E + + K + K K + P++ ELT+EEAE++Q EID +K +D E +K E+E+ +ED KDKGKLKPN GNGADLP +W Q+L ++D+ +P +V+F +K +DV+V+IQ++++ V LKG P+++G LYN++KVEES+W IEDGKV+ + LEK+N+MEWWNR+ PEINTKK+NPENSKLSDLD ETRSMVEKMMYDQRQK MGLPTS++QKKQ++L+KFM QHPEMDFSK KFN Sbjct: 8 ERFDGMLLAMAQQ-HEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFNHHNQLAQKARREKRARQETERREKAERAARLAKEAKAETPGPQIKELTDEEAERLQLEIDQKKDAEDQEAQLKNGSLDSPGKQDAEDEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332
BLAST of NudC nuclear distribution protein vs. UniProt/SwissProt
Match: sp|Q9Y266|NUDC_HUMAN (Nuclear migration protein nudC OS=Homo sapiens OX=9606 GN=NUDC PE=1 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 3.931e-105 Identity = 172/325 (52.92%), Postives = 240/325 (73.85%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQK--QSIAXXXXXXXXXXXXXXXXXXXXXXXIKKIQDNEPRVVELTNEEAEKMQAEID----AEKH----KDMEVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 ++FD + L++AQQ EGG++EL+N FF FL R+TDFF G + A K++T F H + Q + + ++E E ++K ++ + ++ K + + P++ ELT+EEAE++Q EID AE H K+ +D + EED +ED KDKGKLKPN GNGADLP +W Q+L ++D+ +P VNF +K +D++V+IQ++++ V LKG +++G LYN++KVEES+W IEDGKV+ + LEK+N+MEWW+R+ PEINTKK+NPENSKLSDLD ETRSMVEKMMYDQRQK MGLPTS++QKKQ++L+KFM QHPEMDFSK KFN Sbjct: 8 ERFDGMLLAMAQQ-HEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFSHHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 331
BLAST of NudC nuclear distribution protein vs. UniProt/SwissProt
Match: sp|Q17QG2|NUDC_BOVIN (Nuclear migration protein nudC OS=Bos taurus OX=9913 GN=NUDC PE=2 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 6.872e-104 Identity = 167/326 (51.23%), Postives = 234/326 (71.78%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIK--KIQDNEPRVVELTNEEAEKMQAEIDAEK-HKDMEVDIXXXXXXX--------XXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 D+FD + L++AQQ EGG++EL+N FF FL R+TDFF G + A K++T F H + + +++ +E + + K + K K + + P++ ELT+EEAE++Q EID +K ++ E +K E+ ++D KDKGKLKPN GNGADLP +W Q+L ++D+ +P VNF +K +DV+V+IQ++++ V LKG +++G LYN++KVEES+W IEDGKV+ + LEK+N+MEWW+R+ PEINTKK+NPENSKLSDLD ETRSMVEKMMYDQRQK MGLPTS++QKKQ++L+KFM QHPEMDFSK +FN Sbjct: 8 DRFDGMLLAMAQQ-HEGGVQELVNTFFSFLRRKTDFFVGGEEGMAEKLITQTFNHHNQLAQKARREKRARQETERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKDAENQEAQLKNGSLGSPGKQEAEEEEEEDDEKDKGKLKPNLGNGADLPSYRWTQTLSELDLAVPFCVNFRLKGKDVVVDIQRRHLRVGLKGQPAIVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKARFN 332
BLAST of NudC nuclear distribution protein vs. TrEMBL
Match: A0A0B7AID3 (CS domain-containing protein OS=Arion vulgaris OX=1028688 GN=ORF117791 PE=4 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 1.212e-111 Identity = 184/332 (55.42%), Postives = 255/332 (76.81%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQ-------KQSIAXXXXXXXXXXXXXXXXXXXXXXXIKKIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIXX----------XXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 D+FD + +++AQQCE GGI+ELL+ FFGFL R+TDF+ G +A K+V FE ++ ++ A+ + E+K R+E+ KK ++E +K+++ EP++ ELT+EEAEK++ ++ ++KD +VD E K D +ED KDKGK+KPN GNGAD+P W Q+L++V+IR+P KVNFP+KS+D++VNI+K+ +S+ LKGH P+LEGT+YND+KV+ESTW ++D K+I +++EKVNQMEWW+R+ +PEINT+KV PENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTS++QKKQD+L+KFM QHPEMDFSKCKF+ Sbjct: 8 DRFDGMLMAMAQQCE-GGIQELLDAFFGFLARKTDFYTGAGGAQAEKLVIAKFEQYETIFNARLQKEKAERDAEEKRRQERLAKKKTEEEKIAEKVEE-EPKIKELTDEEAEKLERDL---QNKDNDVDAVNGDEDVAEDPIEQKSPSDDEEDEKDKGKIKPNIGNGADMPNYSWTQTLQEVEIRVPFKVNFPLKSKDIVVNIEKRKLSIGLKGHPPVLEGTMYNDVKVDESTWCLQDKKLILINIEKVNQMEWWSRIVTTEPEINTRKVQPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSDEQKKQDVLKKFMEQHPEMDFSKCKFS 334
BLAST of NudC nuclear distribution protein vs. TrEMBL
Match: A0A091GHR4 (Nuclear migration protein nudC OS=Cuculus canorus OX=55661 GN=N303_00258 PE=4 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 9.597e-110 Identity = 175/329 (53.19%), Postives = 240/329 (72.95%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIKKIQD-NEPRVVELTNEEAEKMQAEIDAEKHKDMEVD-------------IXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 D+FD + L++AQQ +GG++EL+N FF FL R+TDFF G A K++T+ F H K + + ++K ++E + + K + ++ Q+ NEPR+ ELT+EEAE++Q EID +K EV+ + +E +D +ED KDKGKLKPN GNGADLP +W Q+L ++D+ +P KVNF +K +DV+V+IQ++ + V LKGH P+++G L+N++KVEES+W IEDGK + + LEK+N+MEWWN++ PEINTKK+NPENSKLSDLD ETRSMVEKMMYDQRQK MGLPTS++QKKQD+L+KFM QHPEMDFSK KFN Sbjct: 13 DRFDGMLLAMAQQ-HQGGVRELVNTFFSFLRRKTDFFTGGEDGVAEKLITETFSYHNKLAQKERKEKKAQQEAERREKAERAAKLAREKQEANEPRIKELTDEEAERLQLEIDQKKEAQGEVNSVPVKPSEAGGDSLDSSKQETDDEEEDEKDKGKLKPNSGNGADLPNYRWTQTLSELDLAVPFKVNFRLKGKDVVVDIQRRRLKVGLKGHSPVIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN 340
BLAST of NudC nuclear distribution protein vs. TrEMBL
Match: A0A091VLZ1 (Nuclear migration protein nudC OS=Nipponia nippon OX=128390 GN=Y956_14884 PE=4 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 2.079e-109 Identity = 175/329 (53.19%), Postives = 238/329 (72.34%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIKKIQD-NEPRVVELTNEEAEKMQAEIDAEKHKDMEVD-------------IXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 D+FD + L++AQQ +GG++EL+N FF FL R+TDFF G A K++TD F H K + + ++K +E + K + K+ Q+ NEPR+ ELT+EEAE++Q EID +K +++ + +E +D +ED KDKGKL+PN GNGADLP +W Q+L ++D+ IP KVNF +K +DV+V+IQ++ + V LKGH P+++G L+N++KVEES+W IEDGK + + LEK+N+MEWWN++ PEINTKK+NPENSKLSDLD ETRSMVEKMMYDQRQK MGLPTS++QKKQD+L+KFM QHPEMDFSK KFN Sbjct: 13 DRFDGMLLAMAQQ-HQGGVRELVNTFFSFLRRKTDFFTGGEDGVAEKLITDTFNHHNKLAQKEQKEKKARQEAERHEKAERAAKLAKEKQEANEPRIKELTDEEAERLQLEIDQKKEAQGQINSVPVKPSEDEGESLDSNKQETDDEEEDEKDKGKLRPNSGNGADLPNYRWTQTLSELDLAIPFKVNFRLKGKDVVVDIQRRRLKVGLKGHSPVIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN 340
BLAST of NudC nuclear distribution protein vs. TrEMBL
Match: U3IT87 (Nuclear distribution C, dynein complex regulator OS=Anas platyrhynchos platyrhynchos OX=8840 GN=NUDC PE=4 SV=2) HSP 1 Score: 332.798 bits (852), Expect = 2.615e-109 Identity = 172/330 (52.12%), Postives = 234/330 (70.91%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIK--KIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIXXXXXXXXXXXXXXXXXX-------------XLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 D+FD + L++AQQ +GG++EL+N FF FL R+TDFF G A K++TD F H K + + ++K +E + + K + K K + NEPR+ ELT+EEAE++Q EID +K EV+ P E++ + +K KLKPN GNGADLP +W Q+L ++D+ IP KV+F +K +DV+V+IQ++++ V LKGH P+++G L+N++KVEES+W IEDGK + + LEK+N+MEWWN++ PEINTKK+NPENSKLSDLD ETRSMVEKMMYDQRQK MGLPTS++QKKQD+L+KFM QHPEMDFSK KFN Sbjct: 13 DRFDGMLLAMAQQ-HQGGVRELVNTFFSFLRRKTDFFTGGEDGVAEKLITDTFNHHNKLAQKERKEKKARQEAERREKAERAAKLAKEAKQEANEPRIKELTDEEAERLQLEIDQKKEAQKEVNSVPVKSAEDEGESSDSNKQETDEEEEDEKDKGKLKPNSGNGADLPNYRWTQTLSELDLAIPFKVSFRLKGKDVVVDIQRRHLKVGLKGHSPVIDGDLFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN 341
BLAST of NudC nuclear distribution protein vs. TrEMBL
Match: A0A1S3JUH0 (nuclear migration protein nudC OS=Lingula unguis OX=7574 GN=LOC106176228 PE=4 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 3.407e-109 Identity = 183/326 (56.13%), Postives = 242/326 (74.23%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIKKIQ------DNEPRVVELTNEEAEKMQAEIDAEK-----HKDMEVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 ++FD + LS+A QCE GG+ ELL+ F FL R+TDF+ G +K +++ D F +K+++ K KEK++REE +K +K + + +K + EP++ E+T+EEAEK+Q EI+ EK ++ D + + + D +ED KDK K+KPN GNGADLP KW Q+L+DV+IRIP KV FP+K +D +V I+KK++ V LKGH P+++G +YND+K EESTW IED K+I L+LEKVNQMEWW+RV PEINTKKV PENSKLSDLDGETRS+VEKMMYDQRQKEMGLPTS++QKKQD+L KFM QHPEMDFSKCKF+ Sbjct: 5 ERFDGMLLSMATQCE-GGVTELLDVIFSFLARKTDFYTGASKGTPEQLILDKFRHFEKEALKKAQKEKEDREESEKRRKERLAKKAEKERLEQEQLKEEPKIKEITDEEAEKLQKEIEKEKTGNDAEENGSGDADEKEETKSDDEEDEKDKDKIKPNSGNGADLPNYKWTQTLQDVEIRIPFKVPFPIKGKDCVVVIEKKHLKVGLKGHPPVIDGPMYNDVKKEESTWCIEDKKIIILNLEKVNQMEWWSRVVTTDPEINTKKVQPENSKLSDLDGETRSLVEKMMYDQRQKEMGLPTSDEQKKQDVLSKFMKQHPEMDFSKCKFS 329
BLAST of NudC nuclear distribution protein vs. Ensembl Cavefish
Match: nudc (nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:103045763]) HSP 1 Score: 301.597 bits (771), Expect = 1.703e-100 Identity = 167/333 (50.15%), Postives = 230/333 (69.07%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXX------XXXXXXXXXXXXXXXXXXXXIKKIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIXXXXXXXXXXXXXXXX------------XXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 +K+D + L +AQQ EGG++EL+N FF FL R+TDFF G ++V +AF H + ++ H +++K+ + + K +E KK +NEPR+ ELT+EEAE++Q EID +K K+ + + K D + + K K+KPN GNGADLP +W QSL +VD+ +P V F +K +DV+V++Q++ + V LKGH P+++ L+N++KVEES+W IEDGKV+ + LEK+N+MEWWN++ PEINTKK+ PENSKLSDLDGETRSMVEKMMYDQRQK MGLPTSE+QKKQD+L+KFM QHPEMDFSK KF+ Sbjct: 6 EKYDGMLLVMAQQ-HEGGVQELVNTFFSFLRRKTDFFTGGESGAPERLVKEAFAHHSQLALQAHKDKQSKQEKEKKEKAERAAKLKAEEERKKKELENEPRIKELTDEEAERLQTEIDQKKDKEEQKEKKDTESSAADTSDKAEKGSESEGEEDEKDKNKVKPNSGNGADLPNYRWTQSLSEVDLIVPFDVKFRLKGKDVVVDVQRRSLKVGLKGHPPVIDAALFNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNKLVTTDPEINTKKICPENSKLSDLDGETRSMVEKMMYDQRQKSMGLPTSEEQKKQDILKKFMEQHPEMDFSKAKFS 337
BLAST of NudC nuclear distribution protein vs. Ensembl Cavefish
Match: nudc (nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:103045763]) HSP 1 Score: 283.878 bits (725), Expect = 1.082e-93 Identity = 158/314 (50.32%), Postives = 215/314 (68.47%), Query Frame = 1 Query: 97 KELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXX------XXXXXXXXXXXXXXXXXXXXIKKIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIXXXXXXXXXXXXXXXX------------XXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 K L+N FF FL R+TDFF G ++V +AF H + ++ H +++K+ + + K +E KK +NEPR+ ELT+EEAE++Q EID +K K+ + + K D + + K K+KPN GNGADLP +W QSL +VD+ +P V F +K +DV+V++Q++ + V LKGH P+++ L+N++KVEES+W IEDGKV+ + LEK+N+MEWWN++ PEINTKK+ PENSKLSDLDGETRSMVEKMMYDQRQK MGLPTSE+QKKQD+L+KFM QHPEMDFSK KF+ Sbjct: 15 KGLVNTFFSFLRRKTDFFTGGESGAPERLVKEAFAHHSQLALQAHKDKQSKQEKEKKEKAERAAKLKAEEERKKKELENEPRIKELTDEEAERLQTEIDQKKDKEEQKEKKDTESSAADTSDKAEKGSESEGEEDEKDKNKVKPNSGNGADLPNYRWTQSLSEVDLIVPFDVKFRLKGKDVVVDVQRRSLKVGLKGHPPVIDAALFNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNKLVTTDPEINTKKICPENSKLSDLDGETRSMVEKMMYDQRQKSMGLPTSEEQKKQDILKKFMEQHPEMDFSKAKFS 328
BLAST of NudC nuclear distribution protein vs. Ensembl Cavefish
Match: nudc (nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:103045763]) HSP 1 Score: 279.256 bits (713), Expect = 3.594e-92 Identity = 154/307 (50.16%), Postives = 212/307 (69.06%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXX------XXXXXXXXXXXXXXXXXXXXIKKIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFM 942 +K+D + L +AQQ EGG++EL+N FF FL R+TDFF G ++V +AF H + ++ H +++K+ + + K +E KK +NEPR+ ELT+EEAE++Q EID + + E D KDK K+KPN GNGADLP +W QSL +VD+ +P V F +K +DV+V++Q++ + V LKGH P+++ L+N++KVEES+W IEDGKV+ + LEK+N+MEWWN++ PEINTKK+ PENSKLSDLDGETRSMVEKMMYDQRQK MGLPTSE+QKKQD+L+ F Sbjct: 6 EKYDGMLLVMAQQ-HEGGVQELVNTFFSFLRRKTDFFTGGESGAPERLVKEAFAHHSQLALQAHKDKQSKQEKEKKEKAERAAKLKAEEERKKKELENEPRIKELTDEEAERLQTEIDQSESEGEE---------------DEKDKNKVKPNSGNGADLPNYRWTQSLSEVDLIVPFDVKFRLKGKDVVVDVQRRSLKVGLKGHPPVIDAALFNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNKLVTTDPEINTKKICPENSKLSDLDGETRSMVEKMMYDQRQKSMGLPTSEEQKKQDILKNFF 296
BLAST of NudC nuclear distribution protein vs. Ensembl Cavefish
Match: nudcd3 (NudC domain containing 3 [Source:NCBI gene;Acc:103040649]) HSP 1 Score: 85.8853 bits (211), Expect = 2.865e-18 Identity = 52/156 (33.33%), Postives = 86/156 (55.13%), Query Frame = 1 Query: 484 NGADLPECKWVQSLKDVDIRI--PTKVNFPVKSRDVIVNIQKKYISVSLK---GHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQK 936 NGA W Q DV++R+ P + VK R V VN+Q + V++K + LLEG + I E S W++E G+ + LSL K ++ WW+ V + EI+ ++N E S ++ +D E ++++++ +D QK G P S + K D+L+K Sbjct: 200 NGAVRENYSWSQDYTDVEVRVFVPPSI---VKGRQVSVNLQCGSVRVAVKEGASEKVLLEGEFTHKINTENSLWSLEPGQCVLLSLSKTGEV-WWSAVLKGEQEIDVNQINRERS-MASVDEEEHAVLDRLTFDYHQKLQGKPQSHEMKVHDMLKK 350
BLAST of NudC nuclear distribution protein vs. Ensembl Sea Lamprey
Match: nudc (nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]) HSP 1 Score: 233.417 bits (594), Expect = 1.348e-74 Identity = 150/340 (44.12%), Postives = 217/340 (63.82%), Query Frame = 1 Query: 19 VFLVMSNDKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIA------XXXXXXXXXXXXXXXXXXXXXXXIKKIQDNEPRVVELTNEEAEKMQAEID--------AEKHKDMEVDI--XXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYIS-VSLKGHQPLLEGTLYNDIKVEES-TWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 V ++FD + L++AQQ EGG++++L+ F FL R+TDFF G K A K++ + F H+K ++A + +E++ R+ +++ ++ +Q+ ++ Q EPR+ E+T+EEA+++Q EID E+ K+ + + ++ED +ED KDKGKLKPN GNGADL +W Q+L +VD+R + +I +Q ++ + +K + +D+ V S TW +E VI +N+MEWW+R+ PEINT+KVNPENSKLSDLDGETRSMVEKMMYDQRQK MGLPTSEDQKKQD+L+KFM QHPEMDFSK KF+ Sbjct: 1 VMAASDEERFDGILLAMAQQ-HEGGVQQMLDTIFSFLRRKTDFFVGGEKAAAEKLLLECFRRHEKAALAGERERAREREERQRRDAEERTRRRQQQEQLDDAQAKEPRIQEVTDEEAQRIQREIDQVRARSDKKERQKNGQSRLPGVEPAPDKEDEEEDEKDKGKLKPNVGNGADLANYRWTQTLSEVDVRALAAAR--ATGKGLIGPVQSLTLNRLGMKFRCQISNLRAVSDVWVVGSLTWILERVFVITSVTSHINKMEWWSRLVVSDPEINTRKVNPENSKLSDLDGETRSMVEKMMYDQRQKAMGLPTSEDQKKQDILKKFMEQHPEMDFSKAKFS 337
BLAST of NudC nuclear distribution protein vs. Ensembl Sea Lamprey
Match: nudcd3 (NudC domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2255]) HSP 1 Score: 85.8853 bits (211), Expect = 5.648e-19 Identity = 50/160 (31.25%), Postives = 91/160 (56.88%), Query Frame = 1 Query: 472 PNEGNGADLPECKWVQSLKDVDIRI--PTKVNFPVKSRDVIVNIQKKYISVSLKGHQP---LLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQK 936 P+ NGA W Q D++I++ P + V+ + V +NIQK + V+++ L+EG L ++I +E S W++E GK I ++L KV + WWN V + + I+ ++N E S ++ +D E ++++++ +D QK G P S + K ++L+K Sbjct: 196 PDSYNGAVRENYVWSQDFTDLEIKVFVPKTI---VRGKQVSINIQKNSLRVAIREQAEEVVLMEGKLTHNINIESSMWSLEPGKCIQVNLNKVGEY-WWNAVLEGEEPIDIDRINKERS-MATVDEEEHAVLDRLTFDYHQKMHGRPQSHEMKVHEMLKK 350
BLAST of NudC nuclear distribution protein vs. Ensembl Nematostella
Match: EDO46710 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RPB6]) HSP 1 Score: 239.965 bits (611), Expect = 3.601e-77 Identity = 110/173 (63.58%), Postives = 142/173 (82.08%), Query Frame = 1 Query: 466 LKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 +KPN GNGADLP KW Q+L+++++RIP V+F K +DV+V+IQ+K++ LKGH P+++G +K+EE TW I DGK + L+LEKVN+MEWW+++ PEINTKKV PENSKLSDLDGETR MVEKMM+DQRQK+MGLPTS++QKKQD+L+KFM QHPEMDFSK KF+ Sbjct: 144 IKPNAGNGADLPNYKWTQTLEEIELRIPLDVSFKPKGKDVVVDIQQKHLKAGLKGHPPIIDGDFPKKVKLEECTWLI-DGKNLVLNLEKVNKMEWWSQLVTSDPEINTKKVQPENSKLSDLDGETRGMVEKMMFDQRQKQMGLPTSDEQKKQDVLKKFMEQHPEMDFSKAKFS 315
BLAST of NudC nuclear distribution protein vs. Ensembl Nematostella
Match: EDO38002 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEA5]) HSP 1 Score: 98.9821 bits (245), Expect = 9.475e-25 Identity = 57/160 (35.62%), Postives = 92/160 (57.50%), Query Frame = 1 Query: 484 NGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQP---------LLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQK 936 NGA L + W Q++ D+DI++P K+RDV V I+ + V LKG P L++G L +K EE W++E GK + ++LEK + +W V PEI+ K++ + D D +T++ E++MYD RQK+MG PT ++Q+ ++L+K Sbjct: 4 NGAALEDYVWAQTIHDIDIKVPVPSCVK-KARDVGVEIKNSSLKVFLKGSVPPDGKVAFTILVDGQLQRHVKCEECMWSLEPGKCVAINLEKTEE-RFWTTVIKGDPEIDRTKID-TTRDIHDFDEQTQTDYEQVMYDYRQKQMGKPTVKEQQTHEMLKK 160
BLAST of NudC nuclear distribution protein vs. Ensembl Nematostella
Match: EDO29367 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T3U5]) HSP 1 Score: 96.6709 bits (239), Expect = 4.121e-24 Identity = 55/149 (36.91%), Postives = 88/149 (59.06%), Query Frame = 1 Query: 469 KPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLL-EGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQ 912 +P+ NGA L + W Q++ D+DI++P K+RDV V I+ + V LKG +L +G L +K EE W++E GK + ++LEK + +W V PEI+ K++ + D D +T++ E++MYD RQK+MG PT ++Q Sbjct: 14 QPDCYNGAALEDYVWAQTIHDIDIKVPVPSCVK-KARDVGVEIKNSSLKVFLKGRSTILVDGQLQRHVKCEECMWSLEPGKCVAINLEKTEE-RFWTTVIKGDPEIDRTKID-TTRDIHDFDEQTQTDYEQVMYDYRQKQMGKPTVKEQ 159
BLAST of NudC nuclear distribution protein vs. Ensembl Medaka
Match: nudc (nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:101169957]) HSP 1 Score: 315.464 bits (807), Expect = 3.598e-106 Identity = 170/322 (52.80%), Postives = 231/322 (71.74%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIKKI------QDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIX-XXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 +K+D + L +AQQ EGG++EL+N FF FL R+TDFF G A K+V +AF+ H K ++ +++ +E++ K K + ++ QD PR+ ELT+EEAEK+Q+E+D + + + + +ED KDKGKLKPN GNGADLP KW Q+L +VD+ +P V F +K +DV+V++Q++ I V LKGH P++EG LYN++KVEES+W I+DGKV+ + LEK+N+MEWW+R+ PE+NTKK+ PENSKLSDLDGETR MVEKMMYDQRQK MGLPTSE+QKKQD+L+KFM QHPEMDFSK KF+ Sbjct: 6 EKYDGMLLVMAQQ-HEGGVQELVNTFFSFLRRKTDFFIGGDSGAAEKLVKEAFDHHNKLAMKAQREKQMRQEKEKKEKAERAAKLAEEEEERRKNQDG-PRIQELTDEEAEKLQSELDKRTASSQASSLAFSVFQSDSEEEEDEKDKGKLKPNSGNGADLPNYKWTQTLSEVDLSVPFDVKFRIKGKDVVVDVQRRSIKVGLKGHPPVVEGQLYNEVKVEESSWLIDDGKVVNVHLEKINKMEWWSRIVTTDPEMNTKKICPENSKLSDLDGETRGMVEKMMYDQRQKSMGLPTSEEQKKQDILKKFMAQHPEMDFSKAKFS 325
BLAST of NudC nuclear distribution protein vs. Ensembl Medaka
Match: nudc (nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:101169957]) HSP 1 Score: 314.694 bits (805), Expect = 3.749e-105 Identity = 167/331 (50.45%), Postives = 229/331 (69.18%), Query Frame = 1 Query: 40 DKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIKKI------QDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIXXXXXXXXXXXXXXXXXXX----------LKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 +K+D + L +AQQ EGG++EL+N FF FL R+TDFF G A K+V +AF+ H K ++ +++ +E++ K K + ++ QD PR+ ELT+EEAEK+Q+E+D +K + E K + D++ + LKPN GNGADLP KW Q+L +VD+ +P V F +K +DV+V++Q++ I V LKGH P++EG LYN++KVEES+W I+DGKV+ + LEK+N+MEWW+R+ PE+NTKK+ PENSKLSDLDGETR MVEKMMYDQRQK MGLPTSE+QKKQD+L+KFM QHPEMDFSK KF+ Sbjct: 47 EKYDGMLLVMAQQ-HEGGVQELVNTFFSFLRRKTDFFIGGDSGAAEKLVKEAFDHHNKLAMKAQREKQMRQEKEKKEKAERAAKLAEEEEERRKNQDG-PRIQELTDEEAEKLQSELDKQKDDEKEEGRANAEKTPDKADKEKGSDSEEEEDEKDKGKLKPNSGNGADLPNYKWTQTLSEVDLSVPFDVKFRIKGKDVVVDVQRRSIKVGLKGHPPVVEGQLYNEVKVEESSWLIDDGKVVNVHLEKINKMEWWSRIVTTDPEMNTKKICPENSKLSDLDGETRGMVEKMMYDQRQKSMGLPTSEEQKKQDILKKFMAQHPEMDFSKAKFS 375
BLAST of NudC nuclear distribution protein vs. Planmine SMEST
Match: SMESG000036795.1 (SMESG000036795.1) HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0 Identity = 317/318 (99.69%), Postives = 317/318 (99.69%), Query Frame = 1 Query: 31 MSNDKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAXXXXXXXXXXXXXXXXXXXXXXXIKKIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 984 MSNDKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAKHNKEKKEREEKDKLKKLKQESEIKKIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIKPEVKEEED DEDPKDKGKLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN Sbjct: 1 MSNDKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKVVTDAFEVHQKQSIAKHNKEKKEREEKDKLKKLKQESEIKKIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIKPEVKEEEDPDEDPKDKGKLKPNEGNGADLPECKWVQSLKDVDIRIPTKVNFPVKSRDVIVNIQKKYISVSLKGHQPLLEGTLYNDIKVEESTWTIEDGKVIYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQKFMTQHPEMDFSKCKFN 318
BLAST of NudC nuclear distribution protein vs. Planmine SMEST
Match: SMESG000064942.1 (SMESG000064942.1) HSP 1 Score: 97.8265 bits (242), Expect = 6.884e-23 Identity = 87/318 (27.36%), Postives = 156/318 (49.06%), Query Frame = 1 Query: 37 NDKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFY---------GVAKEEAFKVVTDAFEVHQ---KQSIAXXXXXXXXXXXXXXXXXXXXXXXIKKIQDNEPRVVELTNEEAEKMQAEIDAEKHKDMEVDIXXXXXXXXXXXXXXXXXXXLKPNEGNGADLPECKWVQSLKDVDIR--IPTKVNFPVKSRDVIVNIQKKYISVSLKGH---QPLLEGTLYNDIKVEESTWTIEDGKV-IYLSLEKVNQMEWWNRVTDKQPEINTKKVNPENSKLSDLDGETRSMVEKMMYDQRQKEMGLPTSEDQKKQDLLQK 936 ++KFDN+ L I Q+ + L+ FGFL RRTD +Y G + +A K++ DAF+ H+ + S++ + + +K + + K+ + ++ ++ +L N+ + DAE + NGA W Q++ ++DIR IP V+ S+D+ V +++K+ISV + +++ L ++K E W+ + + I +S+EKV Q WW + + INT+K++ + +SDLD E ++ + K+MYD RQK++GLPTS+ QK +L+K Sbjct: 6 DEKFDNILLDIIQRV--NTLPNFLDILFGFLRRRTDLYYIMDDKQSKLGFSPGKAEKLILDAFKKHKDIFESSLSNNCRAEKSILNQSQESDKKEIQIDSTVSNDNSKISKLEND----LIYVADAESY--------------------------------NGAIGENYTWSQTIGELDIRVKIPQAVS---NSKDLTVLVERKHISVIANIQNETKSVIDNDLCWEVKKNEVFWSFDRKESKILISIEKV-QERWWEALFIGESTINTRKIDC-SRPMSDLDDEAQAKIHKLMYDNRQKQLGLPTSDQQKMNSVLKK 280 The following BLAST results are available for this feature:
BLAST of NudC nuclear distribution protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of NudC nuclear distribution protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of NudC nuclear distribution protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of NudC nuclear distribution protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 4
BLAST of NudC nuclear distribution protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 2
BLAST of NudC nuclear distribution protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of NudC nuclear distribution protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of NudC nuclear distribution protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of NudC nuclear distribution protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of NudC nuclear distribution protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of NudC nuclear distribution protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of NudC nuclear distribution protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 3
BLAST of NudC nuclear distribution protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of NudC nuclear distribution protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30001081 ID=SMED30001081|Name=NudC nuclear distribution protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1098bpback to top protein sequence of SMED30001081-orf-1 >SMED30001081-orf-1 ID=SMED30001081-orf-1|Name=SMED30001081-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=319bp MSNDKFDNLFLSIAQQCEEGGIKELLNCFFGFLGRRTDFFYGVAKEEAFKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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