SMED30001024

Overview
NameSMED30001024
Smed IDSMED30001024
Length (bp)1227
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30001024 (SMED30001024) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30001024 (SMED30001024) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30001024 (SMED30001024) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30001024 (SMED30001024) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30001024

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 7

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30001024SMESG000079945.1 SmedASXL_010475SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016
whole organism asexual adult RNA-sequencing evidence
nervous systemSMED30001024SMESG000079945.1 dd_Smed_v4_9265_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30001024SMESG000079945.1 dd_Smed_v4_9265_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30001024SMESG000079945.1 dd_Smed_v4_9265_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30001024SMESG000079945.1 dd_Smed_v4_9265_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
whole organism asexual adult colorimetric in situ hybridization evidence
head regionSMED30001024SMESG000079945.1 dd_Smed_v6_9265_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017
whole organism asexual adult RNA-sequencing evidence
epidermisSMED30001024SMESG000079945.1 dd_Smed_v4_9265_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30001024 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.001504:40067..46384 -6038
Homology
BLAST of SMED30001024 vs. TrEMBL
Match: A0A1I8HZG1 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.809e-23
Identity = 53/141 (37.59%), Postives = 82/141 (58.16%), Query Frame = 2
Query:  779 QSHRFLSGKTGKSENAMQNLSFDSKRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY 1201
            Q HR L  +  KS  +  + +   ++L+++        Y+  L  + W ME+PGDPF IK   +P ++P+   + +  + P   RM + NR TFF+ TMP   MSFDI+PNFTSE+Y   +  L  QGKW++  ++FSF+Y
Sbjct:  213 QGHRLLPAERAKSAKSGSSGAGGIRQLSEA--------YDRALAVHGWRMEVPGDPFGIKHHLVPERKPFSVTVPEPTVKPLPPRMRRTNRFTFFHTTMPRVVMSFDIHPNFTSEQYAKTRAALVKQGKWDYRYRDFSFIY 345          
BLAST of SMED30001024 vs. TrEMBL
Match: A0A1I8HLX6 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig007486g1 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.883e-21
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = 2
Query:  779 QSHRFLSGKTGKSENAMQNLSFDSKRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY 1201
            Q HR L  +  KS  +  +     ++L+++        Y+  L  + W ME+PGDPF IK   +P ++P+   + +  + P   RM + NR TFF+ TMP   MSFDI+PNFTSE+Y   +  L  QGKW++  ++FSF+Y
Sbjct:  261 QGHRLLPAERAKSAKSGSSGGGGIRQLSEA--------YDRALAVHGWRMEVPGDPFGIKHHLVPERKPFSVTVPEPTVKPLPPRMRRTNRFTFFHTTMPRVVMSFDIHPNFTSEQYAKTRAALVKQGKWDYRYRDFSFIY 393          
BLAST of SMED30001024 vs. TrEMBL
Match: A0A1I8JAB1 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.049e-18
Identity = 51/141 (36.17%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  779 QSHRFLSGKTGKSENAMQNLSFDSKRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY 1201
            Q HR L  +  KS  +  +     ++L+++        Y+  L  + W ME+PGDPF IK   +P ++P+   + +  + P   RM + NR TFF+ TMP     FDI+PNFTSE+Y   +  L  QGKW++  ++FSF+Y
Sbjct:  208 QGHRLLPAERAKSAKSGSSGGGGIRQLSEA--------YDRALAVHGWRMEVPGDPFGIKHHLVPERKPFSVTVPEPTVKPLPPRMRRTNRFTFFHTTMP---GCFDIHPNFTSEQYAKTRAALVKQGKWDYRYRDFSFIY 337          
BLAST of SMED30001024 vs. TrEMBL
Match: Q5C417 (SJCHGC04703 protein (Fragment) OS=Schistosoma japonicum OX=6182 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 3.687e-17
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 2
Query:  851 KRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY 1201
            K+L +    I    Y++ +  + W MEIPGDP ++K   +P + PY  K+     LP   +M KQN +TFF  T+     SF I+PNFTSE YN  +N L  +G WN++++++SFVY
Sbjct:  126 KKLLKQCKIILEDEYDQAVKYHGWRMEIPGDPLNLKSQLLPKRLPYTVKLHLQPTLPQPPKMIKQNIETFFQPTVKIPIPSFTIHPNFTSESYNKHRNYLIKKGLWNYATRSYSFVY 242          
BLAST of SMED30001024 vs. TrEMBL
Match: A0A4Z2DJJ5 (Uncharacterized protein OS=Schistosoma japonicum OX=6182 GN=EWB00_000500 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.022e-16
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 2
Query:  851 KRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY 1201
            K+L +    I    Y++ +  + W MEIPGDP ++K   +P + PY  K+     LP   +M KQN +TFF  T+     SF I+PNFTSE YN  +N L  +G WN++++++SFVY
Sbjct:  190 KKLLKQCKIILEDEYDQAVKYHGWRMEIPGDPLNLKSQLLPKRLPYTVKLHLQPTLPQPPKMIKQNIETFFQPTVKIPIPSFTIHPNFTSESYNKHRNYLIKKGLWNYATRSYSFVY 306          
BLAST of SMED30001024 vs. Planmine SMEST
Match: SMESG000079945.1 (SMESG000079945.1)

HSP 1 Score: 717.613 bits (1851), Expect = 0.000e+0
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 2
Query:  158 MLLPLDLEMIPPILVKERTFGWYPPAYDQFAKVPYKNMAVLDDYSLYKTQDSPQEIRIENPVNMEQALDENGSVLSSKLNAIRQDLTRRRIDPAVIRQIPLKKFNNCNQFMNISSDWNPKYPEPDLKIVVKNSHRQAPTSSEERKEIISENQESHIEETQGHKIKNFIDSQEYNLVPMKRFNSQRPHTAPGIPFKNSKPKSGSIPSSQSHRFLSGKTGKSENAMQNLSFDSKRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY 1201
            MLLPLDLEMIPPILVKERTFGWYPPAYDQFAKVPYKNMAVLDDYSLYKTQDSPQEIRIENPVNMEQALDENGSVLSSKLNAIRQDLTRRRIDPAVIRQIPLKKFNNCNQFMNISSDWNPKYPEPDLKIVVKNSHRQAPTSSEERKEIISENQESHIEETQGHKIKNFIDSQEYNLVPMKRFNSQRPHTAPGIPFKNSKPKSGSIPSSQSHRFLSGKTGKSENAMQNLSFDSKRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY
Sbjct:    1 MLLPLDLEMIPPILVKERTFGWYPPAYDQFAKVPYKNMAVLDDYSLYKTQDSPQEIRIENPVNMEQALDENGSVLSSKLNAIRQDLTRRRIDPAVIRQIPLKKFNNCNQFMNISSDWNPKYPEPDLKIVVKNSHRQAPTSSEERKEIISENQESHIEETQGHKIKNFIDSQEYNLVPMKRFNSQRPHTAPGIPFKNSKPKSGSIPSSQSHRFLSGKTGKSENAMQNLSFDSKRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY 348          
BLAST of SMED30001024 vs. Planmine SMEST
Match: SMESG000079945.1 (SMESG000079945.1)

HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 2
Query:  182 MIPPILVKERTFGWYPPAYDQFAKVPYKNMAVLDDYSLYKTQDSPQEIRIENPVNMEQALDENGSVLSSKLNAIRQDLTRRRIDPAVIRQIPLKKFNNCNQFMNISSDWNPKYPEPDLKIVVKNSHRQAPTSSEERKEIISENQESHIEETQGHKIKNFIDSQEYNLVPMKRFNSQRPHTAPGIPFKNSKPKSGSIPSSQSHRFLSGKTGKSENAMQNLSFDSKRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY 1201
            MIPPILVKERTFGWYPPAYDQFAKVPYKNMAVLDDYSLYKTQDSPQEIRIENPVNMEQALDENGSVLSSKLNAIRQDLTRRRIDPAVIRQIPLKKFNNCNQFMNISSDWNPKYPEPDLKIVVKNSHRQAPTSSEERKEIISENQESHIEETQGHKIKNFIDSQEYNLVPMKRFNSQRPHTAPGIPFKNSKPKSGSIPSSQSHRFLSGKTGKSENAMQNLSFDSKRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY
Sbjct:    1 MIPPILVKERTFGWYPPAYDQFAKVPYKNMAVLDDYSLYKTQDSPQEIRIENPVNMEQALDENGSVLSSKLNAIRQDLTRRRIDPAVIRQIPLKKFNNCNQFMNISSDWNPKYPEPDLKIVVKNSHRQAPTSSEERKEIISENQESHIEETQGHKIKNFIDSQEYNLVPMKRFNSQRPHTAPGIPFKNSKPKSGSIPSSQSHRFLSGKTGKSENAMQNLSFDSKRLTQSTSNIPRATYEEDLMKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDTFFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY 340          
The following BLAST results are available for this feature:
BLAST of SMED30001024 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1I8HZG11.809e-2337.59Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1I8HLX67.883e-2137.59Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1I8JAB11.049e-1836.17Uncharacterized protein OS=Macrostomum lignano OX=... [more]
Q5C4173.687e-1740.17SJCHGC04703 protein (Fragment) OS=Schistosoma japo... [more]
A0A4Z2DJJ51.022e-1640.17Uncharacterized protein OS=Schistosoma japonicum O... [more]
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BLAST of SMED30001024 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30001024 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000079945.10.000e+0100.00SMESG000079945.1[more]
SMESG000079945.10.000e+0100.00SMESG000079945.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30001024 ID=SMED30001024|Name=SMED30001024|organism=Schmidtea mediterranea sexual|type=transcript|length=1227bp
GTAGCATTGCACACAACTGCGCATTTACCTATTATAGACATGTCGCCTAG
CAACTAATGCGATTTTAATTAAAATTTCAATCACTGAATAAATTGTTGAT
TGCTTGAGGATTTAATATTCATCATCCAGAAACGATAATTAAAACAAAGA
TTGTGAAATGCTTTTGCCTCTGGATTTAGAAATGATTCCGCCAATTTTAG
TAAAAGAAAGAACTTTTGGATGGTATCCTCCAGCTTACGATCAGTTTGCG
AAAGTTCCTTACAAAAATATGGCAGTTCTAGATGATTATTCTCTCTACAA
AACTCAAGATTCACCTCAAGAAATCAGAATTGAAAATCCTGTAAATATGG
AGCAAGCTTTGGATGAAAATGGTTCAGTTCTTAGCTCAAAACTAAATGCA
ATCCGACAAGATCTCACAAGACGTAGAATTGATCCAGCAGTTATTCGACA
AATTCCATTAAAGAAATTCAACAATTGTAATCAATTCATGAATATTTCAA
GCGATTGGAACCCGAAATATCCGGAACCGGATCTTAAAATAGTGGTAAAA
AATTCCCACAGACAGGCACCAACTTCGTCAGAAGAACGCAAGGAAATCAT
TTCTGAAAATCAAGAGTCTCATATTGAAGAAACTCAGGGTCATAAAATTA
AAAATTTCATAGATTCACAAGAGTATAATTTAGTGCCCATGAAGAGATTC
AATTCACAGCGGCCTCACACTGCTCCGGGAATCCCATTTAAAAATTCTAA
ACCTAAAAGCGGTTCTATCCCATCATCTCAATCTCACAGATTTTTGTCTG
GCAAAACTGGGAAAAGTGAAAACGCAATGCAAAATCTGTCTTTTGATTCT
AAAAGACTAACGCAATCAACTTCAAATATTCCACGTGCAACATACGAAGA
GGATTTGATGAAATACAAATGGTTAATGGAAATTCCCGGTGATCCGTTTA
GTATCAAGCAACCTCATATTCCGGTAAAGCAACCATATTTTCAGAAAATC
GAAGACTGTAAGATTCTACCTCCGGAGTTACGGATGCCTAAACAAAATCG
TGATACGTTTTTCTACAATACAATGCCATATCAATCAATGTCTTTTGATA
TAAATCCTAATTTTACATCAGAGAAATACAATGCTAGGAAAAACTTACTA
AGAAGTCAAGGAAAGTGGAATTTCTCCAGCAAAAATTTCTCTTTTGTATA
TTAAAAAAGTTACTTTATTTTTATAAC
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protein sequence of SMED30001024-orf-1

>SMED30001024-orf-1 ID=SMED30001024-orf-1|Name=SMED30001024-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=349bp
MLLPLDLEMIPPILVKERTFGWYPPAYDQFAKVPYKNMAVLDDYSLYKTQ
DSPQEIRIENPVNMEQALDENGSVLSSKLNAIRQDLTRRRIDPAVIRQIP
LKKFNNCNQFMNISSDWNPKYPEPDLKIVVKNSHRQAPTSSEERKEIISE
NQESHIEETQGHKIKNFIDSQEYNLVPMKRFNSQRPHTAPGIPFKNSKPK
SGSIPSSQSHRFLSGKTGKSENAMQNLSFDSKRLTQSTSNIPRATYEEDL
MKYKWLMEIPGDPFSIKQPHIPVKQPYFQKIEDCKILPPELRMPKQNRDT
FFYNTMPYQSMSFDINPNFTSEKYNARKNLLRSQGKWNFSSKNFSFVY*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0000099neuron
PLANA:0000418head
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..221