Homeobox domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30000970 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Homeobox domain-containing protein vs. Ensembl Human
Match: MEIS2 (Meis homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7001]) HSP 1 Score: 49.2914 bits (116), Expect = 2.430e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 146 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 192
BLAST of Homeobox domain-containing protein vs. Ensembl Human
Match: MEIS2 (Meis homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7001]) HSP 1 Score: 49.6766 bits (117), Expect = 2.817e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 199 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 245
BLAST of Homeobox domain-containing protein vs. Ensembl Human
Match: MEIS2 (Meis homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7001]) HSP 1 Score: 49.6766 bits (117), Expect = 2.817e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 199 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 245
BLAST of Homeobox domain-containing protein vs. Ensembl Human
Match: MEIS1 (Meis homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7000]) HSP 1 Score: 49.6766 bits (117), Expect = 2.832e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 218 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 264
BLAST of Homeobox domain-containing protein vs. Ensembl Human
Match: MEIS3 (Meis homeobox 3 [Source:HGNC Symbol;Acc:HGNC:29537]) HSP 1 Score: 49.6766 bits (117), Expect = 2.960e-6 Identity = 23/58 (39.66%), Postives = 32/58 (55.17%), Query Frame = 3 Query: 525 KQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 + KK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 262 RNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 319
BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
Match: ceh-40 (Homeobox protein ceh-40 [Source:UniProtKB/Swiss-Prot;Acc:Q19503]) HSP 1 Score: 53.9138 bits (128), Expect = 4.212e-8 Identity = 23/68 (33.82%), Postives = 42/68 (61.76%), Query Frame = 3 Query: 516 YMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPK 719 Y++ ++K + ++ + +I+ ++ NI PYPS +K+ +A + NI V QV++WF N+R R T K Sbjct: 184 YLDARRKRRNFSKTSTEILNEYFLANINHPYPSEEVKQALAMQCNISVAQVSNWFGNKRIRYKKTMAK 251
BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
Match: ceh-60 (C. Elegans Homeobox [Source:UniProtKB/TrEMBL;Acc:Q45EK2]) HSP 1 Score: 50.447 bits (119), Expect = 5.648e-7 Identity = 20/60 (33.33%), Postives = 41/60 (68.33%), Query Frame = 3 Query: 522 EKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRS 701 ++ +K + ++N I++ W+ ++ + PYPS+ K +A++ NI ++QVN+WF N+R R+ Sbjct: 179 QQGRKRRNFDKNTTDILQNWFHDHRQNPYPSDQEKAELAKQCNIKISQVNNWFGNQRIRT 238
BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
Match: unc-62 (Homeobox protein unc-62 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5D6]) HSP 1 Score: 49.2914 bits (116), Expect = 1.632e-6 Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 3 Query: 525 KQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 K+K K ++ AI AW +N+ PYPS KK +A+E + + QVN+WF N R R Sbjct: 318 KRKVPKVFSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 375
BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
Match: unc-62 (Homeobox protein unc-62 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5D6]) HSP 1 Score: 49.2914 bits (116), Expect = 1.794e-6 Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 3 Query: 525 KQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 K+K K ++ AI AW +N+ PYPS KK +A+E + + QVN+WF N R R Sbjct: 392 KRKVPKVFSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 449
BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
Match: unc-62 (Homeobox protein unc-62 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5D6]) HSP 1 Score: 49.2914 bits (116), Expect = 1.794e-6 Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 3 Query: 525 KQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 K+K K ++ AI AW +N+ PYPS KK +A+E + + QVN+WF N R R Sbjct: 392 KRKVPKVFSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 449
BLAST of Homeobox domain-containing protein vs. Ensembl Fly
Match: hth (gene:FBgn0001235 transcript:FBtr0082255) HSP 1 Score: 48.9062 bits (115), Expect = 2.680e-6 Identity = 23/57 (40.35%), Postives = 32/57 (56.14%), Query Frame = 3 Query: 528 QKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 QKK + A I+ AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 366 QKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRR 422
BLAST of Homeobox domain-containing protein vs. Ensembl Fly
Match: hth (gene:FBgn0001235 transcript:FBtr0082256) HSP 1 Score: 48.9062 bits (115), Expect = 2.995e-6 Identity = 23/57 (40.35%), Postives = 32/57 (56.14%), Query Frame = 3 Query: 528 QKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 QKK + A I+ AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 351 QKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRR 407
BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Match: meis2a (Meis homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-020122-2]) HSP 1 Score: 52.373 bits (124), Expect = 2.680e-7 Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 3 Query: 522 EKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 ++QKK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 274 KRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 332
BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Match: meis2a (Meis homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-020122-2]) HSP 1 Score: 52.373 bits (124), Expect = 2.680e-7 Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 3 Query: 522 EKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 ++QKK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 274 KRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 332
BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Match: meis1b (Meis homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-020122-1]) HSP 1 Score: 49.6766 bits (117), Expect = 2.110e-6 Identity = 23/58 (39.66%), Postives = 32/58 (55.17%), Query Frame = 3 Query: 525 KQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 + KK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 270 RNKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 327
BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Match: pbx4 (pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]) HSP 1 Score: 46.9802 bits (110), Expect = 2.219e-6 Identity = 18/61 (29.51%), Postives = 41/61 (67.21%), Query Frame = 3 Query: 516 YMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 +++ ++K + N+ A +++ ++ +++ PYPS K+ +A++ I V+QV++WF N+R R Sbjct: 49 FLDARRKRRNFNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 109
BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Match: meis2a (Meis homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-020122-2]) HSP 1 Score: 49.2914 bits (116), Expect = 2.609e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 282 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 328
BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Match: MEIS1 (Meis homeobox 1 [Source:NCBI gene;Acc:100488182]) HSP 1 Score: 49.6766 bits (117), Expect = 2.634e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 283 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Match: MEIS1 (Meis homeobox 1 [Source:NCBI gene;Acc:100488182]) HSP 1 Score: 49.6766 bits (117), Expect = 2.677e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 230 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 276
BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Match: MEIS1 (Meis homeobox 1 [Source:NCBI gene;Acc:100488182]) HSP 1 Score: 49.6766 bits (117), Expect = 2.706e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 283 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Match: meis2 (Meis homeobox 2 [Source:NCBI gene;Acc:100036664]) HSP 1 Score: 49.6766 bits (117), Expect = 2.757e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 224 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 270
BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Match: meis3 (Meis homeobox 3 [Source:NCBI gene;Acc:448474]) HSP 1 Score: 49.2914 bits (116), Expect = 3.170e-6 Identity = 23/56 (41.07%), Postives = 31/56 (55.36%), Query Frame = 3 Query: 531 KKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 KK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 266 KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 321
BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Match: Meis3 (Meis homeobox 3 [Source:MGI Symbol;Acc:MGI:108519]) HSP 1 Score: 51.2174 bits (121), Expect = 7.219e-7 Identity = 24/63 (38.10%), Postives = 33/63 (52.38%), Query Frame = 3 Query: 510 DFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 D + KK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 260 DLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 322
BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Match: Meis3 (Meis homeobox 3 [Source:MGI Symbol;Acc:MGI:108519]) HSP 1 Score: 50.8322 bits (120), Expect = 7.842e-7 Identity = 24/63 (38.10%), Postives = 33/63 (52.38%), Query Frame = 3 Query: 510 DFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 D + KK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 243 DLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 305
BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Match: Meis1 (Meis homeobox 1 [Source:MGI Symbol;Acc:MGI:104717]) HSP 1 Score: 49.6766 bits (117), Expect = 1.856e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 283 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Match: Meis1 (Meis homeobox 1 [Source:MGI Symbol;Acc:MGI:104717]) HSP 1 Score: 49.6766 bits (117), Expect = 2.031e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 283 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Match: Meis1 (Meis homeobox 1 [Source:MGI Symbol;Acc:MGI:104717]) HSP 1 Score: 49.2914 bits (116), Expect = 2.664e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 283 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
BLAST of Homeobox domain-containing protein vs. UniProt/SwissProt
Match: sp|Q19503|HM40_CAEEL (Homeobox protein ceh-40 OS=Caenorhabditis elegans OX=6239 GN=ceh-40 PE=1 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 5.358e-7 Identity = 23/68 (33.82%), Postives = 42/68 (61.76%), Query Frame = 3 Query: 516 YMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPK 719 Y++ ++K + ++ + +I+ ++ NI PYPS +K+ +A + NI V QV++WF N+R R T K Sbjct: 184 YLDARRKRRNFSKTSTEILNEYFLANINHPYPSEEVKQALAMQCNISVAQVSNWFGNKRIRYKKTMAK 251
BLAST of Homeobox domain-containing protein vs. UniProt/SwissProt
Match: sp|P97368|MEIS3_MOUSE (Homeobox protein Meis3 OS=Mus musculus OX=10090 GN=Meis3 PE=2 SV=2) HSP 1 Score: 51.2174 bits (121), Expect = 5.050e-6 Identity = 24/63 (38.10%), Postives = 33/63 (52.38%), Query Frame = 3 Query: 510 DFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 D + KK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 260 DLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 322
BLAST of Homeobox domain-containing protein vs. TrEMBL
Match: A0A183NS64 (Homeobox domain-containing protein OS=Schistosoma mattheei OX=31246 GN=SMTD_LOCUS4950 PE=4 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.641e-29 Identity = 52/105 (49.52%), Postives = 80/105 (76.19%), Query Frame = 3 Query: 534 KNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPKKNRKQLQVRLYKFAQELELNSEGRLKAYDIATKMNNMIDEYLS 848 +N+PLN+ A+ +ME+WYTN+++ PYP+ A K+ +A G I V QV+SWFANRR R+ NTKPKKNR++L ++Y+ A E+E ++G L+A D+ ++ +IDEYL+ Sbjct: 431 RNRPLNQTALSVMESWYTNHVDNPYPTTAEKEELAALGGITVIQVSSWFANRRTRTANTKPKKNRRKLYHQIYQLAVEIEALTQGSLRACDLQERIGQIIDEYLT 535
BLAST of Homeobox domain-containing protein vs. TrEMBL
Match: A0A183L9M4 (Homeobox domain-containing protein OS=Schistosoma margrebowiei OX=48269 GN=SMRZ_LOCUS499 PE=4 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 9.366e-29 Identity = 52/105 (49.52%), Postives = 80/105 (76.19%), Query Frame = 3 Query: 534 KNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPKKNRKQLQVRLYKFAQELELNSEGRLKAYDIATKMNNMIDEYLS 848 +N+PLN+ A+ +ME+WYTN+++ PYP+ A K+ +A G I V QV+SWFANRR R+ NTKPKKNR++L ++Y+ A E+E ++G L+A D+ ++ +IDEYL+ Sbjct: 431 RNRPLNQTALSVMESWYTNHVDNPYPTTAEKEELAALGGITVIQVSSWFANRRTRTANTKPKKNRRKLYHQIYQLAVEIETLTQGSLRACDLQERIGQIIDEYLT 535
BLAST of Homeobox domain-containing protein vs. TrEMBL
Match: A0A430QP45 (Homeobox domain-containing protein OS=Schistosoma bovis OX=6184 GN=DC041_0003622 PE=4 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 9.905e-29 Identity = 52/105 (49.52%), Postives = 80/105 (76.19%), Query Frame = 3 Query: 534 KNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPKKNRKQLQVRLYKFAQELELNSEGRLKAYDIATKMNNMIDEYLS 848 +N+PLN+ A+ +ME+WYTN+++ PYP+ A K+ +A G I V QV+SWFANRR R+ NTKPKKNR++L ++Y+ A E+E ++G L+A D+ ++ +IDEYL+ Sbjct: 585 RNRPLNQTALSVMESWYTNHVDNPYPTTAEKEELAALGGITVIQVSSWFANRRTRTANTKPKKNRRKLYHQIYQLAVEIEALTQGSLRACDLQERIGQIIDEYLT 689
BLAST of Homeobox domain-containing protein vs. TrEMBL
Match: A0A095C6T9 (Pre-B-cell leukemia transcription factor 4 OS=Schistosoma haematobium OX=6185 GN=MS3_06095 PE=4 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.224e-28 Identity = 52/105 (49.52%), Postives = 80/105 (76.19%), Query Frame = 3 Query: 534 KNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPKKNRKQLQVRLYKFAQELELNSEGRLKAYDIATKMNNMIDEYLS 848 +N+PLN+ A+ +ME+WYTN+++ PYP+ A K+ +A G I V QV+SWFANRR R+ NTKPKKNR++L ++Y+ A E+E ++G L+A D+ ++ +IDEYL+ Sbjct: 585 RNRPLNQTALSVMESWYTNHVDNPYPTTAEKEELAALGGITVIQVSSWFANRRTRTANTKPKKNRRKLYHQIYQLAVEIEALTQGSLRACDLQERIGQIIDEYLT 689
BLAST of Homeobox domain-containing protein vs. TrEMBL
Match: G4VA00 (Irx-related OS=Schistosoma mansoni OX=6183 GN=Smp_063520 PE=4 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.380e-28 Identity = 52/105 (49.52%), Postives = 80/105 (76.19%), Query Frame = 3 Query: 534 KNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPKKNRKQLQVRLYKFAQELELNSEGRLKAYDIATKMNNMIDEYLS 848 +N+PLN+ A+ +ME+WYTN+++ PYP+ A K+ +A G I V QV+SWFANRR R+ NTKPKKNR++L ++Y+ A E+E ++G L+A D+ ++ +IDEYL+ Sbjct: 431 RNRPLNQTALSVMESWYTNHVDNPYPTTAEKEELAALGGITVIQVSSWFANRRTRTANTKPKKNRRKLYHQIYQLAVEIEALTQGALRACDLQERIGQIIDEYLT 535
BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Match: meis2a (homeobox protein Meis1-like [Source:NCBI gene;Acc:103032373]) HSP 1 Score: 52.373 bits (124), Expect = 1.992e-7 Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 3 Query: 522 EKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 ++QKK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 261 KRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 319
BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Match: pknox1.2 (homeobox protein PKNOX1-like [Source:NCBI gene;Acc:103022264]) HSP 1 Score: 51.6026 bits (122), Expect = 4.072e-7 Identity = 32/96 (33.33%), Postives = 49/96 (51.04%), Query Frame = 3 Query: 498 FVNNDFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR--------SDNTKPKKNRKQLQVR-LYKF 758 F++ D K K+ L ++A +M +W +I PYP+ KK +A + N+ + QVN+WF N R R S + PK +K Q R L +F Sbjct: 258 FLSQDEGSSKSKRGI-LPKHATSVMRSWLFQHIGHPYPTEDEKKQIALQTNLTLLQVNNWFINARRRILQPMLDASSSETPKSKKKTPQTRPLQRF 352
BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Match: pknox1.2 (homeobox protein PKNOX1-like [Source:NCBI gene;Acc:103022264]) HSP 1 Score: 51.6026 bits (122), Expect = 4.203e-7 Identity = 32/96 (33.33%), Postives = 49/96 (51.04%), Query Frame = 3 Query: 498 FVNNDFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR--------SDNTKPKKNRKQLQVR-LYKF 758 F++ D K K+ L ++A +M +W +I PYP+ KK +A + N+ + QVN+WF N R R S + PK +K Q R L +F Sbjct: 303 FLSQDEGSSKSKRGI-LPKHATSVMRSWLFQHIGHPYPTEDEKKQIALQTNLTLLQVNNWFINARRRILQPMLDASSSETPKSKKKTPQTRPLQRF 397
BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Match: pknox1.2 (homeobox protein PKNOX1-like [Source:NCBI gene;Acc:103022264]) HSP 1 Score: 51.6026 bits (122), Expect = 4.232e-7 Identity = 32/96 (33.33%), Postives = 49/96 (51.04%), Query Frame = 3 Query: 498 FVNNDFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR--------SDNTKPKKNRKQLQVR-LYKF 758 F++ D K K+ L ++A +M +W +I PYP+ KK +A + N+ + QVN+WF N R R S + PK +K Q R L +F Sbjct: 275 FLSQDEGSSKSKRGI-LPKHATSVMRSWLFQHIGHPYPTEDEKKQIALQTNLTLLQVNNWFINARRRILQPMLDASSSETPKSKKKTPQTRPLQRF 369
BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Match: six7 (homeobox protein SIX6-like [Source:NCBI gene;Acc:103038426]) HSP 1 Score: 49.6766 bits (117), Expect = 1.054e-6 Identity = 34/115 (29.57%), Postives = 51/115 (44.35%), Query Frame = 3 Query: 441 ANRLVANTLEKINSDRINS-FVNNDFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPKKNRKQLQVRLYKFAQELELNS 782 A RL L + RI F + ++K E ++ WY ++ PYP+ + K+++AQ + TQV +WF NRR R D KNR Q L+ E +S Sbjct: 99 AERLRGRPLGPVEKYRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWY---LQDPYPNPSRKRHLAQATGLTPTQVGNWFKNRRQR-DRAASAKNRLQQDPSLHPSGSSPECSS 209
BLAST of Homeobox domain-containing protein vs. Ensembl Sea Lamprey
Match: pknox2 (pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]) HSP 1 Score: 45.4394 bits (106), Expect = 7.808e-6 Identity = 19/51 (37.25%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 546 LNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 L ++A +M +W +I PYP+ K+ +A + N+ + QVN+WF N R R Sbjct: 265 LPKHATTVMRSWLFQHIVHPYPTEDEKRQIANQTNLTLLQVNNWFINARRR 315
BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
Match: EDO36439 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SIN3]) HSP 1 Score: 54.299 bits (129), Expect = 1.296e-8 Identity = 30/77 (38.96%), Postives = 41/77 (53.25%), Query Frame = 3 Query: 474 INSDRINSFVNNDFYMEK--QKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 I SD S +D K QKK + A IM+AW ++ PYPS K+++AQE + + QVN+WF N R R Sbjct: 219 IGSDDGGSETADDDQGGKKSQKKRGIFPKAATNIMKAWLFQHLTHPYPSEEQKRSLAQETGLTILQVNNWFINARRR 295
BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
Match: EDO39375 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAC9]) HSP 1 Score: 50.447 bits (119), Expect = 2.828e-7 Identity = 21/51 (41.18%), Postives = 32/51 (62.75%), Query Frame = 3 Query: 546 LNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 L + A IM+ W +I PYP+ K+++AQ+ N+ + QVN+WF N R R Sbjct: 204 LPKQATSIMKTWLFQHIMHPYPTEDEKRSIAQQTNLTILQVNNWFINARRR 254
BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
Match: EDO43361 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RYQ8]) HSP 1 Score: 47.7506 bits (112), Expect = 2.108e-6 Identity = 18/61 (29.51%), Postives = 41/61 (67.21%), Query Frame = 3 Query: 516 YMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 +++ ++K + ++ A +I+ ++ +++ PYPS K+ +A++ NI V Q+++WF N+R R Sbjct: 195 FLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELARKCNISVAQISNWFGNKRIR 255
BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Match: meis2a (homeobox protein Meis1 [Source:NCBI gene;Acc:101171546]) HSP 1 Score: 53.1434 bits (126), Expect = 1.266e-7 Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 3 Query: 522 EKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 ++QKK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 244 KRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 302
BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Match: meis2a (homeobox protein Meis1 [Source:NCBI gene;Acc:101171546]) HSP 1 Score: 52.7582 bits (125), Expect = 1.499e-7 Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 3 Query: 522 EKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 ++QKK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 259 KRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 317
BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Match: meis1b (Meis homeobox 1 [Source:NCBI gene;Acc:101167316]) HSP 1 Score: 49.6766 bits (117), Expect = 1.746e-6 Identity = 23/56 (41.07%), Postives = 31/56 (55.36%), Query Frame = 3 Query: 531 KKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 KK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 272 KKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 327
BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Match: meis2a (Meis homeobox 2 [Source:NCBI gene;Acc:101174873]) HSP 1 Score: 49.2914 bits (116), Expect = 2.165e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 284 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 330
BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Match: meis2a (Meis homeobox 2 [Source:NCBI gene;Acc:101174873]) HSP 1 Score: 49.2914 bits (116), Expect = 2.268e-6 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 558 AIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 285 ATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 331
BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Match: SMESG000008497.1 (SMESG000008497.1) HSP 1 Score: 471.085 bits (1211), Expect = 2.738e-170 Identity = 234/236 (99.15%), Postives = 234/236 (99.15%), Query Frame = 3 Query: 144 MQQSN-ESENSSTGFNIRVSEENSTDFHKSNWNMSSWPNTFDVDLLKAYEIEKLKETNPTNQNPSSSIFSEPQSAITDEFRILLDSIKCFEKEKLQNSETANRLVANTLEKINSDRINSFVNNDFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPKKNRKQLQVRLYKFAQELELNSEGRLKAYDIATKMNNMIDEYLS 848 MQQSN ESENSSTGFNI VSEENSTDFHKSNWNMSSWPNTFDVDLLKAYEIEKLKETNPTNQNPSSSIFSEPQSAITDEFRILLDSIKCFEKEKLQNSETANRLVANTLEKINSDRINSFVNNDFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPKKNRKQLQVRLYKFAQELELNSEGRLKAYDIATKMNNMIDEYLS Sbjct: 1 MQQSNSESENSSTGFNIHVSEENSTDFHKSNWNMSSWPNTFDVDLLKAYEIEKLKETNPTNQNPSSSIFSEPQSAITDEFRILLDSIKCFEKEKLQNSETANRLVANTLEKINSDRINSFVNNDFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPKKNRKQLQVRLYKFAQELELNSEGRLKAYDIATKMNNMIDEYLS 236
BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Match: SMESG000005966.1 (SMESG000005966.1) HSP 1 Score: 128.642 bits (322), Expect = 1.401e-35 Identity = 58/103 (56.31%), Postives = 78/103 (75.73%), Query Frame = 3 Query: 534 KNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNRSDNTKPKKNRKQLQVRLYKFAQELELNSEGRLKAYDIATKMNNMIDEY 842 +NKPLN+ A+KIME WY +I++PYP+N K+ +A +G I + QVNSWFANRRNRSDNTKPKKNRK L+ L FA +LE S G LKA I+ ++ ++++EY Sbjct: 145 RNKPLNKKAVKIMEKWYMKHIDYPYPNNKQKETLASQGVISIAQVNSWFANRRNRSDNTKPKKNRKYLESHLMSFASQLETESRGILKANSISKRLTDILNEY 247
BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Match: SMESG000006530.1 (SMESG000006530.1) HSP 1 Score: 53.1434 bits (126), Expect = 1.129e-7 Identity = 29/78 (37.18%), Postives = 43/78 (55.13%), Query Frame = 3 Query: 465 LEKINSDRINSFVNNDFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 +E+I+SD N+ ++QKK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 471 VEEIDSDDKNN--------KRQKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 540
BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Match: SMESG000006530.1 (SMESG000006530.1) HSP 1 Score: 53.1434 bits (126), Expect = 1.172e-7 Identity = 29/78 (37.18%), Postives = 43/78 (55.13%), Query Frame = 3 Query: 465 LEKINSDRINSFVNNDFYMEKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 +E+I+SD N+ ++QKK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 471 VEEIDSDDKNN--------KRQKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 540
BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Match: SMESG000078684.1 (SMESG000078684.1) HSP 1 Score: 52.7582 bits (125), Expect = 1.723e-7 Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 3 Query: 522 EKQKKNKPLNENAIKIMEAWYTNNIEFPYPSNALKKNMAQEGNIGVTQVNSWFANRRNR 698 ++QKK + A IM AW ++ PYPS KK +AQ+ + + QVN+WF N R R Sbjct: 473 KRQKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 531 The following BLAST results are available for this feature:
BLAST of Homeobox domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Homeobox domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Homeobox domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 2
BLAST of Homeobox domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Homeobox domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Homeobox domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 3
BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000970 ID=SMED30000970|Name=Homeobox domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=872bpback to top protein sequence of SMED30000970-orf-1 >SMED30000970-orf-1 ID=SMED30000970-orf-1|Name=SMED30000970-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=236bp MQQSNESENSSTGFNIRVSEENSTDFHKSNWNMSSWPNTFDVDLLKAYEIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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