TPA_inf: Y box protein 4-like protein
Overview
Neoblast Clusters
Zeng et. al., 2018
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppEmbryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30000951 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Human
Match: YBX3 (Y-box binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2428]) HSP 1 Score: 124.02 bits (310), Expect = 1.367e-31 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = 1 Query: 88 TEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 EKK+LATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGPDG+PV+GS+YAAD Sbjct: 82 AEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 173
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Human
Match: YBX3 (Y-box binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2428]) HSP 1 Score: 123.635 bits (309), Expect = 7.996e-31 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = 1 Query: 88 TEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 EKK+LATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGPDG+PV+GS+YAAD Sbjct: 82 AEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 173
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Human
Match: YBX1 (Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]) HSP 1 Score: 121.324 bits (303), Expect = 2.091e-30 Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 +KK++ATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+PVQGSKYAAD Sbjct: 51 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 141
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Human
Match: YBX2 (Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]) HSP 1 Score: 110.153 bits (274), Expect = 3.873e-26 Identity = 68/107 (63.55%), Postives = 86/107 (80.37%), Query Frame = 1 Query: 52 IQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRH 372 + +PA + +K +LA ++ G VKWFNV++GYGFINRND +ED+FVHQTAI +NNPRK+ RSVGDGE VEFDVVEGEKG EA NVTGP G+PV+GS+YA ++R Sbjct: 73 VSGTPAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRK 179
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Human
Match: YBX2 (Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]) HSP 1 Score: 110.153 bits (274), Expect = 3.873e-26 Identity = 68/107 (63.55%), Postives = 86/107 (80.37%), Query Frame = 1 Query: 52 IQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRH 372 + +PA + +K +LA ++ G VKWFNV++GYGFINRND +ED+FVHQTAI +NNPRK+ RSVGDGE VEFDVVEGEKG EA NVTGP G+PV+GS+YA ++R Sbjct: 73 VSGTPAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRK 179
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Celegans
Match: cey-1 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:O62213]) HSP 1 Score: 117.472 bits (293), Expect = 1.568e-30 Identity = 69/95 (72.63%), Postives = 79/95 (83.16%), Query Frame = 1 Query: 82 HPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADK 366 P +K + ATK+ G VKWFNVK+GYGFINR D EDIFVHQTAI+ NNP K+ RS+GD EEV FD+VEG KGLEAA+VTGPDG PVQGSKYAAD+ Sbjct: 10 QPADKPVKATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGSKGLEAASVTGPDGGPVQGSKYAADR 104
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Celegans
Match: cey-3 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:P91398]) HSP 1 Score: 74.7146 bits (182), Expect = 7.344e-15 Identity = 48/88 (54.55%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 94 KKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKW-QRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKY 354 K +L + GKVKW++V YGFI+R+D ++D+FVHQTAI K++ K+ R++ D EEV FD+V+G+ G EAANVTGP G+ V GSKY Sbjct: 57 KIVLTAGLQGKVKWYSVLRRYGFISRSDGEKDVFVHQTAISKSDTEKFYLRTLADEEEVLFDLVDGKNGPEAANVTGPAGVNVSGSKY 144
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Celegans
Match: cey-3 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:P91398]) HSP 1 Score: 74.7146 bits (182), Expect = 7.344e-15 Identity = 48/88 (54.55%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 94 KKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKW-QRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKY 354 K +L + GKVKW++V YGFI+R+D ++D+FVHQTAI K++ K+ R++ D EEV FD+V+G+ G EAANVTGP G+ V GSKY Sbjct: 57 KIVLTAGLQGKVKWYSVLRRYGFISRSDGEKDVFVHQTAISKSDTEKFYLRTLADEEEVLFDLVDGKNGPEAANVTGPAGVNVSGSKY 144
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Celegans
Match: cey-2 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:P91306]) HSP 1 Score: 71.633 bits (174), Expect = 7.899e-14 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 94 KKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRK-WQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKY 354 K + T + GKVKW++V YGFI+RND ++DIFVHQTAI K+ K + R++GD EEV FD+VEG+ G EAANVTGP+G V GS+Y Sbjct: 59 KTAITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGKNGPEAANVTGPNGDNVIGSRY 146
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Celegans
Match: cey-4 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:G5EDV3]) HSP 1 Score: 70.4774 bits (171), Expect = 2.666e-13 Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 94 KKILATKINGKVKWFNVKSGYGFINRN---DNQEDIFVHQTAILKNNPRK-WQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYA 357 KK++ T + G VKWF+V+ YGF+ R+ D ED FVHQTAI K++ K + R++ D E V FD+VEG KG EAANVTGPDG V+GS++A Sbjct: 82 KKVIETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVEGLKGPEAANVTGPDGENVRGSRFA 173
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Fly
Match: yps (gene:FBgn0022959 transcript:FBtr0076027) HSP 1 Score: 113.62 bits (283), Expect = 1.032e-27 Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 85 PTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKR 369 P K+++ATK+ G VKWFNVKSGYGFINRND +ED+FVHQ+AI +NNP+K RSVGDGE VEFDVV GEKG EAANVTGP G PV+GS++AADKR Sbjct: 52 PPTKEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKR 146
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Fly
Match: yps (gene:FBgn0022959 transcript:FBtr0305992) HSP 1 Score: 113.235 bits (282), Expect = 1.051e-27 Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 85 PTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKR 369 P K+++ATK+ G VKWFNVKSGYGFINRND +ED+FVHQ+AI +NNP+K RSVGDGE VEFDVV GEKG EAANVTGP G PV+GS++AADKR Sbjct: 52 PPTKEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKR 146
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Fly
Match: lin-28 (gene:FBgn0035626 transcript:FBtr0077090) HSP 1 Score: 51.6026 bits (122), Expect = 2.085e-7 Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 121 GKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKY 354 GK KWFNV G+GF+ ND +++FVHQ+ I + RS+G+ EEVEF+ +GLEA V+ G QGS Y Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGF----RSLGEQEEVEFECQRTSRGLEATRVSSRHGGSCQGSTY 114
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 121.324 bits (303), Expect = 1.137e-30 Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 +KK++ATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+PVQGSKYAAD Sbjct: 31 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 121
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 121.324 bits (303), Expect = 1.137e-30 Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 +KK++ATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+PVQGSKYAAD Sbjct: 31 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 121
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 120.939 bits (302), Expect = 1.349e-30 Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 +KK++ATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+PVQGSKYAAD Sbjct: 31 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 121
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Xenopus
Match: hmgcs1 (3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:Xenbase;Acc:XB-GENE-942074]) HSP 1 Score: 128.257 bits (321), Expect = 4.451e-33 Identity = 75/95 (78.95%), Postives = 86/95 (90.53%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHY 375 EKK++ATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+PVQGSKYAAD+ H+ Sbjct: 29 EKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHF 123
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Xenopus
Match: ybx3 (Y-box binding protein 3 [Source:NCBI gene;Acc:548572]) HSP 1 Score: 118.627 bits (296), Expect = 3.221e-30 Identity = 71/90 (78.89%), Postives = 80/90 (88.89%), Query Frame = 1 Query: 94 KKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 +K+LATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVV GEKG EAANVTGP G PVQGS+YAAD Sbjct: 29 RKVLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVAGEKGAEAANVTGPKGAPVQGSRYAAD 118
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Xenopus
Match: hmgcs1 (3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:Xenbase;Acc:XB-GENE-942074]) HSP 1 Score: 119.013 bits (297), Expect = 1.041e-29 Identity = 71/92 (77.17%), Postives = 81/92 (88.04%), Query Frame = 1 Query: 100 ILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHY 375 + TK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+PVQGSKYAAD+ H+ Sbjct: 40 CVTTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHF 131
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Mouse
Match: Ybx3 (Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]) HSP 1 Score: 125.176 bits (313), Expect = 2.601e-32 Identity = 79/110 (71.82%), Postives = 89/110 (80.91%), Query Frame = 1 Query: 49 DIQTSPAERSIHPT-----EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 D PA S P EKK+LATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGPDG+PV+GS+YAAD Sbjct: 56 DAAPGPAPASSAPAGGEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Mouse
Match: Ybx3 (Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]) HSP 1 Score: 124.79 bits (312), Expect = 1.604e-31 Identity = 79/110 (71.82%), Postives = 89/110 (80.91%), Query Frame = 1 Query: 49 DIQTSPAERSIHPT-----EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 D PA S P EKK+LATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGPDG+PV+GS+YAAD Sbjct: 56 DAAPGPAPASSAPAGGEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Mouse
Match: Ybx1 (Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]) HSP 1 Score: 121.324 bits (303), Expect = 1.423e-30 Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 +KK++ATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+PVQGSKYAAD Sbjct: 49 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 139
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Mouse
Match: Ybx2 (Y box protein 2 [Source:MGI Symbol;Acc:MGI:1096372]) HSP 1 Score: 109.768 bits (273), Expect = 3.760e-26 Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 1 Query: 61 SPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYA 357 +PA + +K +LA ++ G VKWFNV++GYGFINRND +ED+FVHQTAI +NNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+PV+GS+YA Sbjct: 77 TPAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 175
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Mouse
Match: Ybx2 (Y box protein 2 [Source:MGI Symbol;Acc:MGI:1096372]) HSP 1 Score: 107.071 bits (266), Expect = 9.690e-26 Identity = 66/87 (75.86%), Postives = 77/87 (88.51%), Query Frame = 1 Query: 97 KILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYA 357 K LA ++ G VKWFNV++GYGFINRND +ED+FVHQTAI +NNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+PV+GS+YA Sbjct: 12 KALAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 98
BLAST of TPA_inf: Y box protein 4-like protein vs. UniProt/SwissProt
Match: sp|P41824|YBOXH_APLCA (Y-box factor homolog OS=Aplysia californica OX=6500 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.613e-31 Identity = 79/119 (66.39%), Postives = 96/119 (80.67%), Query Frame = 1 Query: 43 MADIQTSP--------AERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHY 375 MAD + P E++ EKKI+A++++G VKWFNVKSGYGFINR+D +ED+FVHQTAI+KNNPRK+ RSVGDGE+VEFDVVEGEKG EAANVTGP+G VQGSKYAAD+R + Sbjct: 1 MADTEKQPEVEENQPDQEQNEEQKEKKIIASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANVTGPEGSNVQGSKYAADRRRF 119
BLAST of TPA_inf: Y box protein 4-like protein vs. UniProt/SwissProt
Match: sp|Q9JKB3|YBOX3_MOUSE (Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 1.122e-30 Identity = 79/110 (71.82%), Postives = 89/110 (80.91%), Query Frame = 1 Query: 49 DIQTSPAERSIHPT-----EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 D PA S P EKK+LATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGPDG+PV+GS+YAAD Sbjct: 56 DAAPGPAPASSAPAGGEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
BLAST of TPA_inf: Y box protein 4-like protein vs. UniProt/SwissProt
Match: sp|Q62764|YBOX3_RAT (Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.144e-30 Identity = 79/110 (71.82%), Postives = 89/110 (80.91%), Query Frame = 1 Query: 49 DIQTSPAERSIHPT-----EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 D PA S P EKK+LATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGPDG+PV+GS+YAAD Sbjct: 56 DAAPGPAPASSAPAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
BLAST of TPA_inf: Y box protein 4-like protein vs. UniProt/SwissProt
Match: sp|P21573|YBOX1_XENLA (Y-box-binding protein 1 OS=Xenopus laevis OX=8355 GN=ybx1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.958e-30 Identity = 73/91 (80.22%), Postives = 84/91 (92.31%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 +KK++ATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP+G+PVQGSKYAAD Sbjct: 29 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPEGVPVQGSKYAAD 119
BLAST of TPA_inf: Y box protein 4-like protein vs. UniProt/SwissProt
Match: sp|P16989|YBOX3_HUMAN (Y-box-binding protein 3 OS=Homo sapiens OX=9606 GN=YBX3 PE=1 SV=4) HSP 1 Score: 123.635 bits (309), Expect = 3.840e-30 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = 1 Query: 88 TEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 EKK+LATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGPDG+PV+GS+YAAD Sbjct: 82 AEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 173
BLAST of TPA_inf: Y box protein 4-like protein vs. TrEMBL
Match: F9W2W0 (Y box protein 4-like protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 491.115 bits (1263), Expect = 6.412e-170 Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 1 Query: 43 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHYXXXXXXXXXXXXXXXXXXXLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTEXXXXXXXXXXXXXXXXXXXXXQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYXXXXXXXXXXXXXXXXXXXXXXXXXXNSYIRGYSPGPPNTRRYMDSRPGPVMNTYSDSGPIIPXXXXXXXXXXXXXPIMYHKINSGVSSRSTRGRQFGGGEXXXXXXXXXXXXXXXXXXXXTVSDEKRATGGRAPSLDAESNQSDDDAIQKTSELNLEEIRAS 1176 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGRVRSLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTERRRTLPSRRRSYYPRPIPPPPQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYRGGGVPRRRFIGGFGRGGHANGGSGGNSYIRGYSPGPPNTRRYMDSRPGPVMNTYSDSGPIIPRGTSRFRRGRGGRPIMYHKINSGVSSRSTRGRQFGGGERRNWRDYNSYNNRNNEDNNETVSDEKRATGGRAPSLDAESNQSDDDAIQKTSELNLEEIRAS Sbjct: 1 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGRVRSLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTERRRTLPSRRRSYYPRPIPPPPQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYRGGGVPRRRFIGGFGRGGHANGGSGGNSYIRGYSPGPPNTRRYMDSRPGPVMNTYSDSGPIIPRGTSRFRRGRGGRPIMYHKINSGVSSRSTRGRQFGGGERRNWRDYNSYNNRNNEDNNETVSDEKRATGGRAPSLDAESNQSDDDAIQKTSELNLEEIRAS 378
BLAST of TPA_inf: Y box protein 4-like protein vs. TrEMBL
Match: Q86FT3 (Y1 protein OS=Dugesia etrusca OX=47672 GN=Y1 PE=2 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 1.038e-105 Identity = 250/275 (90.91%), Postives = 259/275 (94.18%), Query Frame = 1 Query: 43 MADIQTSPAERSIHPTEKKILA-----TKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHYXXXXXXXXXXXXXXXXXXXLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTEXXXXXXXXXXXXXXXXXXXXXQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYXXXXXXXXXXXXXXXXXXXXXXXXXXNSYIRGYSPGPPNTRRYMDSRPGPVMNTY 852 MADIQTSP ERS+H TEKKILA TKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGG+VRSL+NGPRGRSLSREMDST EDAGPEGDAVFGTERRRTLP RRRSYYPRP+PPPPQG YYMNRR +PSRDDYRE DEYENR M++GYRGGGVPRRRFIGGFGRGGHANGGSG N+YIRGYSPGPPN RRYMDSRPGPVMN + Sbjct: 1 MADIQTSPTERSVHATEKKILAYDYLATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGKVRSLKNGPRGRSLSREMDSTTEDAGPEGDAVFGTERRRTLPIRRRSYYPRPMPPPPQGGYYMNRRPLPSRDDYRESDEYENRTMIMGYRGGGVPRRRFIGGFGRGGHANGGSGANTYIRGYSPGPPNARRYMDSRPGPVMNIF 275
BLAST of TPA_inf: Y box protein 4-like protein vs. TrEMBL
Match: A0A4S2LJH5 (CSD_1 domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_006721 PE=4 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.148e-31 Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHY 375 EKK++AT+I G VKWFNVKSGYGFINR D +EDIFVHQ+AILKNNP KWQRSVGDGE+VEFDVV+G+KGLEA NVTGP G+PVQGSKYAADKR Y Sbjct: 17 EKKVVATRITGVVKWFNVKSGYGFINRTDTKEDIFVHQSAILKNNPHKWQRSVGDGEDVEFDVVQGDKGLEATNVTGPHGVPVQGSKYAADKRRY 111
BLAST of TPA_inf: Y box protein 4-like protein vs. TrEMBL
Match: A0A1S8X552 (Cold-shock DNA-binding domain protein OS=Opisthorchis viverrini OX=6198 GN=X801_02330 PE=4 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.578e-31 Identity = 79/95 (83.16%), Postives = 87/95 (91.58%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHY 375 EKK++AT+I G VKWFNVKSGYGFINR D +EDIFVHQ+AILKNNP KWQRSVGDGEEVEFDVV+G+KGLEA NVTGP G+PVQGSKYAADKR Y Sbjct: 17 EKKVVATRITGVVKWFNVKSGYGFINRTDTKEDIFVHQSAILKNNPHKWQRSVGDGEEVEFDVVQGDKGLEATNVTGPHGVPVQGSKYAADKRRY 111
BLAST of TPA_inf: Y box protein 4-like protein vs. TrEMBL
Match: A0A074ZT23 (CSD_1 domain-containing protein OS=Opisthorchis viverrini OX=6198 GN=T265_06248 PE=4 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.608e-31 Identity = 79/95 (83.16%), Postives = 87/95 (91.58%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHY 375 EKK++AT+I G VKWFNVKSGYGFINR D +EDIFVHQ+AILKNNP KWQRSVGDGEEVEFDVV+G+KGLEA NVTGP G+PVQGSKYAADKR Y Sbjct: 17 EKKVVATRITGVVKWFNVKSGYGFINRTDTKEDIFVHQSAILKNNPHKWQRSVGDGEEVEFDVVQGDKGLEATNVTGPHGVPVQGSKYAADKRRY 111
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Cavefish
Match: ybx1 (Y-box binding protein 1 [Source:NCBI gene;Acc:103040011]) HSP 1 Score: 122.094 bits (305), Expect = 5.054e-31 Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAAD 363 +KK++ATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+PVQGSKYAAD Sbjct: 32 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 122
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Cavefish
Match: YBX2 (Y-box-binding protein 2-A-like [Source:NCBI gene;Acc:103036193]) HSP 1 Score: 115.931 bits (289), Expect = 7.149e-29 Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 1 Query: 49 DIQTSP---AE-RSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADK 366 D+Q +P AE + P E+K++AT + G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVE KG EAANVTGP G+PV+GS+YA +K Sbjct: 5 DVQEAPPSAAETQEDLPPERKVIATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEIVEFDVVEATKGSEAANVTGPGGVPVKGSRYAPNK 114
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Cavefish
Match: YBX2 (Y-box-binding protein 2-A-like [Source:NCBI gene;Acc:103036193]) HSP 1 Score: 110.538 bits (275), Expect = 7.814e-27 Identity = 67/93 (72.04%), Postives = 78/93 (83.87%), Query Frame = 1 Query: 88 TEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADK 366 T I+AT + G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVE KG EAANVTGP G+PV+GS+YA +K Sbjct: 15 TSVSIVATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEIVEFDVVEATKGSEAANVTGPGGVPVKGSRYAPNK 107
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Nematostella
Match: EDO41469 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S475]) HSP 1 Score: 117.857 bits (294), Expect = 2.188e-32 Identity = 71/90 (78.89%), Postives = 80/90 (88.89%), Query Frame = 1 Query: 100 ILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKR 369 I ATK+ G VKWFNVK+GYGFINR+DN+EDIFVHQTAI KNNP+K+ RSVGDGE VEF+VV G KGLEA+NVTGPDG PVQGSKYA D+R Sbjct: 3 IAATKVTGTVKWFNVKNGYGFINRDDNKEDIFVHQTAIAKNNPKKYLRSVGDGEVVEFNVVSGTKGLEASNVTGPDGEPVQGSKYAPDRR 92
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Nematostella
Match: EDO44703 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RV03]) HSP 1 Score: 52.7582 bits (125), Expect = 2.267e-7 Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 1 Query: 115 INGKVKWFNVKSGYGFINRNDNQEDIFVHQTAI 213 G VKWFN+ G+GFI R+D ED+FVHQ+AI Sbjct: 483 CTGSVKWFNLIKGFGFITRDDGGEDVFVHQSAI 515
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Medaka
Match: ybx1 (Y-box binding protein 1 [Source:NCBI gene;Acc:100049221]) HSP 1 Score: 118.627 bits (296), Expect = 6.478e-30 Identity = 72/92 (78.26%), Postives = 83/92 (90.22%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADK 366 +KK++ATK+ G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDVVEGEKG EAANVTGP G+ VQGSKYAAD+ Sbjct: 33 DKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYAADR 124
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Medaka
Match: ENSORLT00000007875.2 (Y-box binding protein 2 [Source:NCBI gene;Acc:100049372]) HSP 1 Score: 115.931 bits (289), Expect = 3.400e-28 Identity = 67/93 (72.04%), Postives = 81/93 (87.10%), Query Frame = 1 Query: 88 TEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADK 366 +E+K++AT + G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDV+E KG EAANVTGP GIPV+GS+YA +K Sbjct: 103 SERKVIATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSRYAPNK 195
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Medaka
Match: ENSORLT00000007880.2 (Y-box binding protein 2 [Source:NCBI gene;Acc:100049372]) HSP 1 Score: 115.931 bits (289), Expect = 3.852e-28 Identity = 67/93 (72.04%), Postives = 81/93 (87.10%), Query Frame = 1 Query: 88 TEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADK 366 +E+K++AT + G VKWFNV++GYGFINRND +ED+FVHQTAI KNNPRK+ RSVGDGE VEFDV+E KG EAANVTGP GIPV+GS+YA +K Sbjct: 103 SERKVIATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSRYAPNK 195
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Medaka
Match: ENSORLT00000029434.1 (pep primary_assembly:ASM223467v1:3:36782961:36787024:1 gene:ENSORLG00000026367.1 transcript:ENSORLT00000029434.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 64.3142 bits (155), Expect = 2.013e-12 Identity = 28/53 (52.83%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 88 TEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRS 246 +++K++ T + VKWF+V +GYG INRN+ +ED+FV QTAI NNPR + RS Sbjct: 28 SKRKVITTGVQDTVKWFHVCNGYGLINRNNTKEDVFVPQTAIKNNNPRNFLRS 80
BLAST of TPA_inf: Y box protein 4-like protein vs. Planmine SMEST
Match: SMESG000076962.1 (SMESG000076962.1) HSP 1 Score: 488.034 bits (1255), Expect = 2.829e-172 Identity = 377/378 (99.74%), Postives = 377/378 (99.74%), Query Frame = 1 Query: 43 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHYXXXXXXXXXXXXXXXXXXXLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTEXXXXXXXXXXXXXXXXXXXXXQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYXXXXXXXXXXXXXXXXXXXXXXXXXXNSYIRGYSPGPPNTRRYMDSRPGPVMNTYSDSGPIIPXXXXXXXXXXXXXPIMYHKINSGVSSRSTRGRQFGGGEXXXXXXXXXXXXXXXXXXXXTVSDEKRATGGRAPSLDAESNQSDDDAIQKTSELNLEEIRAS 1176 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGRVRSLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTERRRTLPSRRRSYYPRPIPPPPQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYRGGGVPRRRFIGGFGRGGHANGGSGGNSYIRGYSPG PNTRRYMDSRPGPVMNTYSDSGPIIPRGTSRFRRGRGGRPIMYHKINSGVSSRSTRGRQFGGGERRNWRDYNSYNNRNNEDNNETVSDEKRATGGRAPSLDAESNQSDDDAIQKTSELNLEEIRAS Sbjct: 1 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGRVRSLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTERRRTLPSRRRSYYPRPIPPPPQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYRGGGVPRRRFIGGFGRGGHANGGSGGNSYIRGYSPGSPNTRRYMDSRPGPVMNTYSDSGPIIPRGTSRFRRGRGGRPIMYHKINSGVSSRSTRGRQFGGGERRNWRDYNSYNNRNNEDNNETVSDEKRATGGRAPSLDAESNQSDDDAIQKTSELNLEEIRAS 378
BLAST of TPA_inf: Y box protein 4-like protein vs. Planmine SMEST
Match: SMESG000076962.1 (SMESG000076962.1) HSP 1 Score: 481.871 bits (1239), Expect = 8.271e-170 Identity = 376/378 (99.47%), Postives = 376/378 (99.47%), Query Frame = 1 Query: 43 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHYXXXXXXXXXXXXXXXXXXXLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTEXXXXXXXXXXXXXXXXXXXXXQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYXXXXXXXXXXXXXXXXXXXXXXXXXXNSYIRGYSPGPPNTRRYMDSRPGPVMNTYSDSGPIIPXXXXXXXXXXXXXPIMYHKINSGVSSRSTRGRQFGGGEXXXXXXXXXXXXXXXXXXXXTVSDEKRATGGRAPSLDAESNQSDDDAIQKTSELNLEEIRAS 1176 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGRVRSLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTERRRTLPSRRRSYYPRPIPPPPQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYRGGGVPRRRFIGGFGRGGHANGGSGGNSYIRGYSPG PNTRRYMDSRPGPVMNTYSDSGPIIPRGTSRFRRGRGGRPIMYHKINSGVSSRSTRGRQFGGGERRNWRDYNSYNNRNNEDNNETVSDEKRATGGRAPSLDAESNQSDDDAIQ TSELNLEEIRAS Sbjct: 1 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGRVRSLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTERRRTLPSRRRSYYPRPIPPPPQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYRGGGVPRRRFIGGFGRGGHANGGSGGNSYIRGYSPGSPNTRRYMDSRPGPVMNTYSDSGPIIPRGTSRFRRGRGGRPIMYHKINSGVSSRSTRGRQFGGGERRNWRDYNSYNNRNNEDNNETVSDEKRATGGRAPSLDAESNQSDDDAIQ-TSELNLEEIRAS 377
BLAST of TPA_inf: Y box protein 4-like protein vs. Planmine SMEST
Match: SMESG000076962.1 (SMESG000076962.1) HSP 1 Score: 481.485 bits (1238), Expect = 1.435e-169 Identity = 377/383 (98.43%), Postives = 377/383 (98.43%), Query Frame = 1 Query: 43 MADIQTSPAERSIHPTEKKILA-----TKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHYXXXXXXXXXXXXXXXXXXXLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTEXXXXXXXXXXXXXXXXXXXXXQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYXXXXXXXXXXXXXXXXXXXXXXXXXXNSYIRGYSPGPPNTRRYMDSRPGPVMNTYSDSGPIIPXXXXXXXXXXXXXPIMYHKINSGVSSRSTRGRQFGGGEXXXXXXXXXXXXXXXXXXXXTVSDEKRATGGRAPSLDAESNQSDDDAIQKTSELNLEEIRAS 1176 MADIQTSPAERSIHPTEKKILA TKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGRVRSLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTERRRTLPSRRRSYYPRPIPPPPQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYRGGGVPRRRFIGGFGRGGHANGGSGGNSYIRGYSPG PNTRRYMDSRPGPVMNTYSDSGPIIPRGTSRFRRGRGGRPIMYHKINSGVSSRSTRGRQFGGGERRNWRDYNSYNNRNNEDNNETVSDEKRATGGRAPSLDAESNQSDDDAIQKTSELNLEEIRAS Sbjct: 1 MADIQTSPAERSIHPTEKKILAYDYLATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGRVRSLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTERRRTLPSRRRSYYPRPIPPPPQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYRGGGVPRRRFIGGFGRGGHANGGSGGNSYIRGYSPGSPNTRRYMDSRPGPVMNTYSDSGPIIPRGTSRFRRGRGGRPIMYHKINSGVSSRSTRGRQFGGGERRNWRDYNSYNNRNNEDNNETVSDEKRATGGRAPSLDAESNQSDDDAIQKTSELNLEEIRAS 383
BLAST of TPA_inf: Y box protein 4-like protein vs. Planmine SMEST
Match: SMESG000076962.1 (SMESG000076962.1) HSP 1 Score: 413.69 bits (1062), Expect = 4.221e-143 Identity = 315/316 (99.68%), Postives = 315/316 (99.68%), Query Frame = 1 Query: 43 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYAADKRHYXXXXXXXXXXXXXXXXXXXLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTEXXXXXXXXXXXXXXXXXXXXXQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYXXXXXXXXXXXXXXXXXXXXXXXXXXNSYIRGYSPGPPNTRRYMDSRPGPVMNTYSDSGPIIPXXXXXXXXXXXXXPIMYHKINSGVSSRSTRGRQFGGGE 990 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGRVRSLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTERRRTLPSRRRSYYPRPIPPPPQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYRGGGVPRRRFIGGFGRGGHANGGSGGNSYIRGYSPG PNTRRYMDSRPGPVMNTYSDSGPIIPRGTSRFRRGRGGRPIMYHKINSGVSSRSTRGRQFGGGE Sbjct: 1 MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSRSFGRAVGRGFGGRVRSLRNGPRGRSLSREMDSTNEDAGPEGDAVFGTERRRTLPSRRRSYYPRPIPPPPQGSYYMNRRHIPSRDDYREPDEYENRPMLLGYRGGGVPRRRFIGGFGRGGHANGGSGGNSYIRGYSPGSPNTRRYMDSRPGPVMNTYSDSGPIIPRGTSRFRRGRGGRPIMYHKINSGVSSRSTRGRQFGGGE 316
BLAST of TPA_inf: Y box protein 4-like protein vs. Planmine SMEST
Match: SMESG000032180.1 (SMESG000032180.1) HSP 1 Score: 90.1225 bits (222), Expect = 1.297e-20 Identity = 55/89 (61.80%), Postives = 75/89 (84.27%), Query Frame = 1 Query: 91 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSXXXXXXXXXXXXXXXXXLEAANVTGPDGIPVQGSKYA 357 +K++L T+I GKVKWFNVK GYGF+ R+DN EDIF+HQ+AI+K+NP ++SVG+GEE++FD+V+G KG EAANV+ DG V+GS+YA Sbjct: 21 QKQVLFTEITGKVKWFNVKRGYGFVCRDDNCEDIFIHQSAIVKSNPDHPRKSVGEGEEIKFDIVKGAKGNEAANVSAIDGSCVKGSEYA 109 The following BLAST results are available for this feature:
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 3
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of TPA_inf: Y box protein 4-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of TPA_inf: Y box protein 4-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 3
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of TPA_inf: Y box protein 4-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of TPA_inf: Y box protein 4-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Cross References
External references for this transcript
Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000951 ID=SMED30000951|Name=TPA_inf: Y box protein 4-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1330bpback to top protein sequence of SMED30000951-orf-1 >SMED30000951-orf-1 ID=SMED30000951-orf-1|Name=SMED30000951-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=379bp MADIQTSPAERSIHPTEKKILATKINGKVKWFNVKSGYGFINRNDNQEDIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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