Thioredoxin
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30000901 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8Note: Hover over icons to view figure legend
Homology
BLAST of Thioredoxin vs. Ensembl Human
Match: TXN (thioredoxin [Source:HGNC Symbol;Acc:HGNC:12435]) HSP 1 Score: 85.5001 bits (210), Expect = 1.345e-21 Identity = 49/103 (47.57%), Postives = 74/103 (71.84%), Query Frame = 3 Query: 87 MVRELVTVTEFDELL-ASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITD 392 MV+++ + T F E L A+ DKL+VVDF+ATWCGPC+ I P F++LS+++ +V+F++VDVD D A +C+V MPTF F+K +FSGA+++KL I + Sbjct: 1 MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
BLAST of Thioredoxin vs. Ensembl Human
Match: TXN (thioredoxin [Source:HGNC Symbol;Acc:HGNC:12435]) HSP 1 Score: 75.485 bits (184), Expect = 5.995e-18 Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 3 Query: 87 MVRELVTVTEFDELL-ASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITD 392 MV+++ + T F E L A+ DKL+VVDF+ATWCGPC+ I P F+ ++ E C+V MPTF F+K +FSGA+++KL I + Sbjct: 1 MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHDVASE--------------------CEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 83
BLAST of Thioredoxin vs. Ensembl Human
Match: TXNL1 (thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]) HSP 1 Score: 57.7658 bits (138), Expect = 6.262e-10 Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 EL + +L VV FT CGPC +IAP F+++S ++P VF++VDV + TA +++ PTF F+++ Q+ GA L + I Sbjct: 16 ELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKI 103
BLAST of Thioredoxin vs. Ensembl Human
Match: TXNL1 (thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]) HSP 1 Score: 57.7658 bits (138), Expect = 6.262e-10 Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 EL + +L VV FT CGPC +IAP F+++S ++P VF++VDV + TA +++ PTF F+++ Q+ GA L + I Sbjct: 16 ELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKI 103
BLAST of Thioredoxin vs. Ensembl Human
Match: TXNL1 (thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]) HSP 1 Score: 57.7658 bits (138), Expect = 6.386e-10 Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 EL + +L VV FT CGPC +IAP F+++S ++P VF++VDV + TA +++ PTF F+++ Q+ GA L + I Sbjct: 12 ELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKI 99
BLAST of Thioredoxin vs. Ensembl Celegans
Match: trx-1 (Thioredoxin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09433]) HSP 1 Score: 62.7734 bits (151), Expect = 3.799e-13 Identity = 39/103 (37.86%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 90 VRELVTVTEFDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDN 395 + EL +++F++L+ +K+I++DF ATWCGPC+ IAP++ L+ ++F KVDVD+ D K V MPTF F K+ G ED+LR+ + ++ Sbjct: 8 ILELADMSDFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKVLEH 110
BLAST of Thioredoxin vs. Ensembl Celegans
Match: Y55F3AR.2 (pep chromosome:WBcel235:IV:1094545:1096723:1 gene:WBGene00021933.1 transcript:Y55F3AR.2.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y55F3AR.2) HSP 1 Score: 64.3142 bits (155), Expect = 9.373e-13 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 3 Query: 111 TEFD-ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAIT 389 ++FD + A K + VDFTA+WCGPCQ IAP+F+ L+ ++ VF+KVDVD+ TA V +MPTF + + K GA E LR + Sbjct: 10 SDFDRKFSAGNGKAVFVDFTASWCGPCQYIAPIFSDLANQYKGSVFLKVDVDECRGTAATYGVNAMPTFIAFVNGQKKATIQGADESGLRSMVA 103
BLAST of Thioredoxin vs. Ensembl Celegans
Match: trx-1 (Thioredoxin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09433]) HSP 1 Score: 58.5362 bits (140), Expect = 1.326e-11 Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 3 Query: 111 TEFDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDN 395 ++F++L+ +K+I++DF ATWCGPC+ IAP++ L+ ++F KVDVD+ D K V MPTF F K+ G ED+LR+ + ++ Sbjct: 16 SDFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKVLEH 111
BLAST of Thioredoxin vs. Ensembl Celegans
Match: png-1 (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Source:UniProtKB/Swiss-Prot;Acc:Q9TW67]) HSP 1 Score: 60.8474 bits (146), Expect = 3.006e-11 Identity = 34/101 (33.66%), Postives = 59/101 (58.42%), Query Frame = 3 Query: 90 VRELVTVTEFDELLASCD--KLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 V E+ ++ E + +L D +LI++DF A WCGPC+ I+P+F S E+ + F+KV+ D D ++ +++MPTF F K+ GA++ + + I Sbjct: 3 VTEVGSLPELNNILERSDANRLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKI 103
BLAST of Thioredoxin vs. Ensembl Celegans
Match: txl-1 (ThioredoXin-Like; Thioredoxin-like protein; Thioredoxin-like protein TXL [Source:UniProtKB/TrEMBL;Acc:G5EES9]) HSP 1 Score: 59.3066 bits (142), Expect = 6.439e-11 Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 3 Query: 144 KLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 K ++VDFTA WCGPC+ IAP F LS ++ VF+KVDV+ T+ + V SMPTF ++ Q GA L + Sbjct: 22 KSVIVDFTAVWCGPCKMIAPTFEALSNQYLGAVFLKVDVEICEKTSSENGVNSMPTFMVFQSGVRVEQMKGADAKALETMV 102
BLAST of Thioredoxin vs. Ensembl Fly
Match: Txl (gene:FBgn0035631 transcript:FBtr0077098) HSP 1 Score: 71.633 bits (174), Expect = 3.518e-15 Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDN 395 EL + +L+VVDFTA+WCGPC++IAP+F T ++P +F+KVDVDK DTA V++MPTF FY++ T + GA + L I ++ Sbjct: 15 ELAQAGIQLVVVDFTASWCGPCKRIAPIFETFPTKYPKAIFLKVDVDKCQDTAAGQGVSAMPTFIFYRNRTKIDRVQGADVNGLEAKIQEH 105
BLAST of Thioredoxin vs. Ensembl Fly
Match: dhd (gene:FBgn0011761 transcript:FBtr0070749) HSP 1 Score: 63.929 bits (154), Expect = 1.428e-13 Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 3 Query: 132 ASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXX-XXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKL 374 A+ DKLIV+DF ATWCGPC+++ +L++++ V + E+ KV SMPTF F + N F+GA E KL Sbjct: 16 AADDKLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEELTERYKVRSMPTFVFLRQNRRLASFAGADEHKL 97
BLAST of Thioredoxin vs. Ensembl Fly
Match: dhd (gene:FBgn0011761 transcript:FBtr0345745) HSP 1 Score: 63.929 bits (154), Expect = 1.428e-13 Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 3 Query: 132 ASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXX-XXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKL 374 A+ DKLIV+DF ATWCGPC+++ +L++++ V + E+ KV SMPTF F + N F+GA E KL Sbjct: 16 AADDKLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEELTERYKVRSMPTFVFLRQNRRLASFAGADEHKL 97
BLAST of Thioredoxin vs. Ensembl Fly
Match: TrxT (gene:FBgn0029752 transcript:FBtr0070755) HSP 1 Score: 62.3882 bits (150), Expect = 1.555e-12 Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXX-XXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRK 380 +L+ + DKL+V+DF A WCGPC+ IAP + L+Q++ D V V V+VD+N D + V SMPTF F K + F G + DKL K Sbjct: 14 QLILAEDKLVVIDFYADWCGPCKIIAPKLDELAQQYSDRVVVLKVNVDENEDITVEYNVNSMPTFVFIKGGNVLELFVGCNSDKLAK 100
BLAST of Thioredoxin vs. Ensembl Fly
Match: TrxT (gene:FBgn0029752 transcript:FBtr0340478) HSP 1 Score: 62.3882 bits (150), Expect = 1.555e-12 Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXX-XXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRK 380 +L+ + DKL+V+DF A WCGPC+ IAP + L+Q++ D V V V+VD+N D + V SMPTF F K + F G + DKL K Sbjct: 14 QLILAEDKLVVIDFYADWCGPCKIIAPKLDELAQQYSDRVVVLKVNVDENEDITVEYNVNSMPTFVFIKGGNVLELFVGCNSDKLAK 100
BLAST of Thioredoxin vs. Ensembl Zebrafish
Match: txn (thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]) HSP 1 Score: 82.8037 bits (203), Expect = 1.023e-20 Identity = 54/107 (50.47%), Postives = 69/107 (64.49%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQ--EFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 MV E+ FD L + DKL+VVDFTATWCGPCQ I P F LS+ E +VVF+KVDVD D A C ++ MPTFHFYK+ +FSG+++ KL + I +K Sbjct: 1 MVLEIEDKAAFDNALKNAGDKLVVVDFTATWCGPCQTIGPYFKLLSEKPENKNVVFLKVDVDDAQDVAALCGISCMPTFHFYKNGKKVDEFSGSNQSKLEEKINSHK 107
BLAST of Thioredoxin vs. Ensembl Zebrafish
Match: TXN (zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]) HSP 1 Score: 82.0333 bits (201), Expect = 2.028e-20 Identity = 52/107 (48.60%), Postives = 72/107 (67.29%), Query Frame = 3 Query: 99 LVTVTE----FDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQ--EFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 ++ V E FD+ LA DKL+VVDFTATWCGPCQ IAP + LS+ ++ +VVF+KVDVD D A+ C++ MPTFHFYK+ FSG+++ KL + + +K Sbjct: 1 MIVVIEDQDGFDKALAGAGDKLVVVDFTATWCGPCQSIAPFYKGLSENPDYSNVVFLKVDVDDAQDVAQSCEIKCMPTFHFYKNGKKLDDFSGSNQTKLEEMVKQHK 107
BLAST of Thioredoxin vs. Ensembl Zebrafish
Match: txn (thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]) HSP 1 Score: 78.5666 bits (192), Expect = 3.985e-19 Identity = 51/97 (52.58%), Postives = 65/97 (67.01%), Query Frame = 3 Query: 117 FDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQ--EFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 FD L + DKL+VVDFTATWCGPCQ I P F LS+ E +VVF+KVDVD D A C ++ MPTFHFYK+ +FSG+++ KL + I +K Sbjct: 9 FDNALKNAGDKLVVVDFTATWCGPCQTIGPYFKLLSEKPENKNVVFLKVDVDDAQDVAALCGISCMPTFHFYKNGKKVDEFSGSNQSKLEEKINSHK 105
BLAST of Thioredoxin vs. Ensembl Zebrafish
Match: txnl1 (thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]) HSP 1 Score: 58.9214 bits (141), Expect = 1.750e-10 Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 EL + +L VV FT + C PC +IAP FN LS ++P VVF++VDV TA +++ PTF F+++ Q+ GA L + I Sbjct: 16 ELSGAGSRLTVVKFTMSGCRPCVRIAPAFNMLSNKYPQVVFLEVDVHVCQATAAANNISATPTFLFFRNKVRVDQYQGADASGLEEKI 103
BLAST of Thioredoxin vs. Ensembl Zebrafish
Match: txnl1 (thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]) HSP 1 Score: 58.9214 bits (141), Expect = 1.784e-10 Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 EL + +L VV FT + C PC +IAP FN LS ++P VVF++VDV TA +++ PTF F+++ Q+ GA L + I Sbjct: 16 ELSGAGSRLTVVKFTMSGCRPCVRIAPAFNMLSNKYPQVVFLEVDVHVCQATAAANNISATPTFLFFRNKVRVDQYQGADASGLEEKI 103
BLAST of Thioredoxin vs. Ensembl Xenopus
Match: ENSXETT00000029198.1 (MGC80314 protein [Source:NCBI gene;Acc:100170420]) HSP 1 Score: 95.1301 bits (235), Expect = 2.082e-25 Identity = 58/105 (55.24%), Postives = 73/105 (69.52%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLA-SCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 MVR + ++ EF +L + DKL+VVDFTATWCGPC+ I+PVF LS E PDVVF+KVDVD D A C V MPTFHFYK+ H+FSGA++ L + + D K Sbjct: 1 MVRHVESLDEFQNILKEAGDKLVVVDFTATWCGPCKMISPVFEKLSVENPDVVFIKVDVDDAQDVAAHCDVKCMPTFHFYKNGQKVHEFSGANQASLIQKVQDLK 105
BLAST of Thioredoxin vs. Ensembl Xenopus
Match: btg5.3 (B-cell translocation gene 5, gene 3 [Source:Xenbase;Acc:XB-GENE-5805799]) HSP 1 Score: 82.0333 bits (201), Expect = 2.150e-20 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 3 Query: 141 DKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 +KL+V+DFTA WCGPCQ+IAP F LS EFPD+V KVDVD +D A+ C ++SMPTF F+K +FSGA KL++ I Sbjct: 18 EKLVVIDFTAKWCGPCQRIAPDFEKLSTEFPDIVLYKVDVDDASDVAQVCGISSMPTFIFFKSGKQVERFSGADIKKLKETI 99
BLAST of Thioredoxin vs. Ensembl Xenopus
Match: btg5.3 (B-cell translocation gene 5, gene 3 [Source:Xenbase;Acc:XB-GENE-5805799]) HSP 1 Score: 75.8702 bits (185), Expect = 8.291e-18 Identity = 45/83 (54.22%), Postives = 59/83 (71.08%), Query Frame = 3 Query: 87 MVRELVTVTEFD-ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDN 332 MV+ L +V E+ L + +KL+V+DFTA WCGPCQ+IAP F LS EFPD+V KVDVD +D A+ C ++SMPTF F+K Sbjct: 1 MVKYLASVEEYQCALKDAGEKLVVIDFTAKWCGPCQRIAPDFEKLSTEFPDIVLYKVDVDDASDVAQVCGISSMPTFIFFKSG 83
BLAST of Thioredoxin vs. Ensembl Xenopus
Match: ENSXETT00000014226.1 (uncharacterized loc100170428 [Source:NCBI gene;Acc:100170428]) HSP 1 Score: 60.8474 bits (146), Expect = 4.055e-12 Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 M+R L +V E L KL++V+F++ CG C +AP + L E+PD++ KV D + C++TS PTF FYKD QFSGA +LR+ I Sbjct: 1 MIRYLRSVEELQYALRDAGQKLVLVNFSSHKCGQCTIVAPEYEKLCTEYPDILLYKVLDDAPKL-CQHCEITSTPTFAFYKDRLKIKQFSGADIVQLRETI 100
BLAST of Thioredoxin vs. Ensembl Xenopus
Match: fabp2 (fatty acid binding protein 2 [Source:Xenbase;Acc:XB-GENE-485137]) HSP 1 Score: 60.077 bits (144), Expect = 6.742e-12 Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLA-SCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 M+R L +V E L + KL++V+F++ CG C +AP + L E+PD++ KV D + C++TS PTF FYKD QFSGA +LR+ I Sbjct: 1 MIRYLRSVEELQYALRDAGQKLVLVNFSSHKCGQCTIVAPEYEKLCTEYPDILLYKVLDDAPKL-CQHCEITSTPTFVFYKDRLKIKQFSGADIVQLRETI 100
BLAST of Thioredoxin vs. Ensembl Mouse
Match: Txn1 (thioredoxin 1 [Source:MGI Symbol;Acc:MGI:98874]) HSP 1 Score: 82.4185 bits (202), Expect = 1.284e-20 Identity = 50/103 (48.54%), Postives = 71/103 (68.93%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITD 392 MV+ + + F E LA+ DKL+VVDF+ATWCGPC+ I P F++L ++ +VVF++VDVD D A C+V MPTF FYK +FSGA+++KL +IT+ Sbjct: 1 MVKLIESKEAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDVDDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASITE 103
BLAST of Thioredoxin vs. Ensembl Mouse
Match: Txndc8 (thioredoxin domain containing 8 [Source:MGI Symbol;Acc:MGI:1914652]) HSP 1 Score: 68.9366 bits (167), Expect = 6.805e-15 Identity = 37/85 (43.53%), Postives = 60/85 (70.59%), Query Frame = 3 Query: 75 QIIKMVRELVTVTEFDELLA-SCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYK 326 Q++ MV+ + ++E EL + + +KL+VV+F+A WCGPC+ IAPVF +S ++ +V F +VDVD + + AE C +T +PTF +K Sbjct: 23 QMLIMVKRIKNMSELKELFSDAGNKLVVVEFSAKWCGPCKTIAPVFQAMSLKYQNVTFAQVDVDSSKELAEHCDITMLPTFQMFK 107
BLAST of Thioredoxin vs. Ensembl Mouse
Match: Txndc2 (thioredoxin domain containing 2 (spermatozoa) [Source:MGI Symbol;Acc:MGI:2389312]) HSP 1 Score: 67.781 bits (164), Expect = 2.592e-13 Identity = 40/103 (38.83%), Postives = 67/103 (65.05%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITD 392 +VR + EF+E+L +KL+ VDF+A WCGPC+ + P+F++LS + DV+F++VD + + C++ +PTF FYK+ +FSGA KL ++I++ Sbjct: 446 LVRVIKDKEEFEEVLKDAGEKLVAVDFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDTEDCEQLVQDCEIFHLPTFQFYKNEEKVGEFSGALVGKLERSISE 548
BLAST of Thioredoxin vs. Ensembl Mouse
Match: Txndc2 (thioredoxin domain containing 2 (spermatozoa) [Source:MGI Symbol;Acc:MGI:2389312]) HSP 1 Score: 67.3958 bits (163), Expect = 2.872e-13 Identity = 40/103 (38.83%), Postives = 67/103 (65.05%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITD 392 +VR + EF+E+L +KL+ VDF+A WCGPC+ + P+F++LS + DV+F++VD + + C++ +PTF FYK+ +FSGA KL ++I++ Sbjct: 439 LVRVIKDKEEFEEVLKDAGEKLVAVDFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDTEDCEQLVQDCEIFHLPTFQFYKNEEKVGEFSGALVGKLERSISE 541
BLAST of Thioredoxin vs. Ensembl Mouse
Match: Txnl1 (thioredoxin-like 1 [Source:MGI Symbol;Acc:MGI:1860078]) HSP 1 Score: 58.151 bits (139), Expect = 3.838e-10 Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 EL + +L VV FT CGPC +IAP F+++S ++P VF++VDV + TA +++ PTF F+++ Q+ GA L + I Sbjct: 16 ELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKI 103
BLAST of Thioredoxin vs. UniProt/SwissProt
Match: sp|Q98TX1|THIO_OPHHA (Thioredoxin OS=Ophiophagus hannah OX=8665 GN=TXN PE=3 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 4.673e-23 Identity = 53/101 (52.48%), Postives = 74/101 (73.27%), Query Frame = 3 Query: 87 MVRELVTVTEFD-ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 MV+ + +TEF EL + KLIVVDF+ATWCGPC+ I P F+++ +++PDVVF+++DVD D A C V MPTF FYK+N H+FSGA+++KL +AI Sbjct: 1 MVKIVGDLTEFRAELSNAGSKLIVVDFSATWCGPCKMIKPFFHSMVEKYPDVVFIEIDVDDAQDVASHCDVKCMPTFQFYKNNEKVHEFSGANKEKLEEAI 101
BLAST of Thioredoxin vs. UniProt/SwissProt
Match: sp|Q9DGI3|THIO_ICTPU (Thioredoxin OS=Ictalurus punctatus OX=7998 GN=txn PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.441e-22 Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTL--SQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 MV + + F L + DKL+VVDFTATWCGPCQKI P+F TL S+++ +VVF+KVDVD D + C + MPTFHFYK+ +FSGA+E L++ I D+K Sbjct: 1 MVVHIENLNAFSAALKNAGDKLVVVDFTATWCGPCQKIGPIFETLSKSEDYQNVVFLKVDVDDAADVSSHCDIKCMPTFHFYKNGQKIDEFSGANEQTLKQKINDHK 107
BLAST of Thioredoxin vs. UniProt/SwissProt
Match: sp|O96952|THIO_GEOCY (Thioredoxin OS=Geodia cydonium OX=6047 GN=THIO PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.703e-22 Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLA-SCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDN-TLKHQFSGASEDKLRKAITDNK 398 MV L T +FD+ L + DKL+V+DFTA+WCGPCQ+IAP + +++EFPDV+F KVDVD+N++TAE K+ +MPTF FYK L GA+E LR+ I NK Sbjct: 1 MVNFLKTKADFDQALKDAGDKLVVIDFTASWCGPCQRIAPKYVEMAKEFPDVIFYKVDVDENDETAEAEKIQAMPTFKFYKSGKALSDYVQGANEAGLREKIKKNK 106
BLAST of Thioredoxin vs. UniProt/SwissProt
Match: sp|P22803|TRX2_YEAST (Thioredoxin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRX2 PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 6.424e-21 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDN 395 MV +L + +E+D LAS DKL+VVDF ATWCGPC+ IAP+ ++++ D F K+DVD+ +D A+K +V+SMPT FYK + GA+ +++AI N Sbjct: 1 MVTQLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAIASN 103
BLAST of Thioredoxin vs. UniProt/SwissProt
Match: sp|P10599|THIO_HUMAN (Thioredoxin OS=Homo sapiens OX=9606 GN=TXN PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 6.460e-21 Identity = 49/103 (47.57%), Postives = 74/103 (71.84%), Query Frame = 3 Query: 87 MVRELVTVTEFDELL-ASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITD 392 MV+++ + T F E L A+ DKL+VVDF+ATWCGPC+ I P F++LS+++ +V+F++VDVD D A +C+V MPTF F+K +FSGA+++KL I + Sbjct: 1 MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
BLAST of Thioredoxin vs. TrEMBL
Match: A0A068AX24 (Thioredoxin OS=Dugesia japonica OX=6161 GN=Trx PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.377e-30 Identity = 66/104 (63.46%), Postives = 82/104 (78.85%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 MVR+L T+ EF+E+L S DKLIVVDFTATWCGPCQ I P+F LS+E DVVFVKVDVD+N++TA+ C +++MPT HFYKD L H F GAS+ KL++AI K Sbjct: 1 MVRQLKTLAEFNEVLKSTDKLIVVDFTATWCGPCQHIGPIFVKLSEELTDVVFVKVDVDENDETAKHCNISAMPTLHFYKDTKLVHDFCGASDVKLKQAIVQYK 104
BLAST of Thioredoxin vs. TrEMBL
Match: Q962B7 (Thioredoxin OS=Branchiostoma belcheri OX=7741 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.632e-26 Identity = 60/104 (57.69%), Postives = 78/104 (75.00%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 MV+ + T FD+LLA DKLIVVDFTA+WCGPC+ IAPVF L++E PDVVFVKVDVD N++TA C +++MPTFH Y++ + GASE+KLR+ + NK Sbjct: 1 MVQMIETKAAFDKLLAETDKLIVVDFTASWCGPCRMIAPVFEKLAEENPDVVFVKVDVDANDETAGACGISAMPTFHCYRNGAKVEELCGASEEKLREMVAKNK 104
BLAST of Thioredoxin vs. TrEMBL
Match: A0A3B4WGX5 (Thioredoxin OS=Seriola lalandi dorsalis OX=1841481 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.733e-26 Identity = 60/93 (64.52%), Postives = 74/93 (79.57%), Query Frame = 3 Query: 111 TEFDELLA-SCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 EFD+ LA + DKL+VVDFTA+WCGPCQ+IAPVF L+ E PDVVFVKVDVD+N++ A C ++SMPTF FYK H+FSGASE+K+R AI Sbjct: 7 AEFDKALADAGDKLVVVDFTASWCGPCQRIAPVFAALADEMPDVVFVKVDVDENDEVASDCGISSMPTFQFYKSGAKVHEFSGASEEKIRDAI 99
BLAST of Thioredoxin vs. TrEMBL
Match: R1DZ00 (Uncharacterized protein OS=Emiliania huxleyi OX=2903 GN=EMIHUDRAFT_436615 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.597e-25 Identity = 63/100 (63.00%), Postives = 77/100 (77.00%), Query Frame = 3 Query: 90 VRELVTVTEFDELLA-SCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 V L T EFD+ LA + DKL+VVDFTA+WCGPCQ+IAPVF L+ E PDVVFVKVDVD+N++ A C ++SMPTF FYK H+FSGASE+K+R AI Sbjct: 153 VAMLDTKAEFDKALADAGDKLVVVDFTASWCGPCQRIAPVFAALADEMPDVVFVKVDVDENDEVASDCGISSMPTFQFYKSGAKVHEFSGASEEKIRDAI 252
BLAST of Thioredoxin vs. TrEMBL
Match: B6VFL5 (Thioredoxin OS=Bombina orientalis OX=8346 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.344e-22 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 3 Query: 87 MVRELVTVTEFDE-LLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 MVR + + EF + L+ + DKL+VVDFTATWCGPC+ IAP F +LS+++PDVVF+KVDVD D A C + MPTFHFYK+ H FSGA+++ L + + + K Sbjct: 1 MVRHIENLEEFKQALVDAGDKLVVVDFTATWCGPCKMIAPFFKSLSEKYPDVVFLKVDVDDAQDVAASCDIKCMPTFHFYKNGEKVHDFSGANQNTLEQKVVELK 105
BLAST of Thioredoxin vs. Ensembl Cavefish
Match: zgc:56493 (thioredoxin-like [Source:NCBI gene;Acc:103040975]) HSP 1 Score: 81.6481 bits (200), Expect = 1.824e-20 Identity = 51/97 (52.58%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 117 FDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQ--EFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 FD+ LA DKL+VVDFTATWCGPCQ IAP + LS+ + +VVF+KVDVD D A+ C++ MPTFHFYK+ +FSG+++ KL + + NK Sbjct: 11 FDKALAEAGDKLVVVDFTATWCGPCQSIAPFYKGLSEKPDNGNVVFLKVDVDDAQDVAQSCEIKCMPTFHFYKNGKKVDEFSGSNQAKLEELVNTNK 107
BLAST of Thioredoxin vs. Ensembl Cavefish
Match: txn (thioredoxin-like [Source:NCBI gene;Acc:103039731]) HSP 1 Score: 73.559 bits (179), Expect = 3.049e-17 Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 90 VRELVTVTEFDELLA-SCDKLIVVDFTATWCGPCQKIAPVFNTLSQ--EFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 V E+ FD+ L + KL+VVDFTATWCGPC+ IAP + LS + +VVF+KVDVD D A C++ MPTFHFYK+ +FSG + DKL + + +K Sbjct: 3 VIEIEDKDSFDKALRDAGSKLVVVDFTATWCGPCKMIAPYYKELSDNPQNSNVVFLKVDVDDAQDVAAHCEIKCMPTFHFYKNGKKIDEFSGGNRDKLVEILNKHK 108
BLAST of Thioredoxin vs. Ensembl Cavefish
Match: txnl1 (thioredoxin like 1 [Source:NCBI gene;Acc:103021638]) HSP 1 Score: 60.077 bits (144), Expect = 6.694e-11 Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 90 VRELVTVTEFD-ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGAS----EDKLRKAITDN 395 V+ + EF EL ++ +L VV FT C PC +IAP FN LS ++P VVF++VDV TA +++ PTF F+++ Q+ GA EDK+++ + ++ Sbjct: 4 VKVIANDAEFQPELASAGSRLAVVKFTMAGCRPCLRIAPAFNMLSSKYPQVVFLEVDVHVCQGTAAANNISATPTFLFFRNKVRVDQYQGADASGLEDKIKQHVEND 110
BLAST of Thioredoxin vs. Ensembl Cavefish
Match: txnl1 (thioredoxin like 1 [Source:NCBI gene;Acc:103021638]) HSP 1 Score: 59.6918 bits (143), Expect = 7.140e-11 Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 90 VRELVTVTEFD-ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGAS----EDKLRKAITDN 395 V+ + EF EL ++ +L VV FT C PC +IAP FN LS ++P VVF++VDV TA +++ PTF F+++ Q+ GA EDK+++ + ++ Sbjct: 4 VKVIANDAEFQPELASAGSRLAVVKFTMAGCRPCLRIAPAFNMLSSKYPQVVFLEVDVHVCQGTAAANNISATPTFLFFRNKVRVDQYQGADASGLEDKIKQHVEND 110
BLAST of Thioredoxin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009652.1 (pep scaffold:Pmarinus_7.0:GL478563:4231:10899:-1 gene:ENSPMAG00000008707.1 transcript:ENSPMAT00000009652.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 74.3294 bits (181), Expect = 3.174e-18 Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 144 KLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITD 392 KL+V+DF+ATWCGPC+ I+P+F+ + E+ +VVF VDVD D AE C + +MPTF F+K+N + GA++D L K + D Sbjct: 21 KLVVIDFSATWCGPCKIISPIFHAFANEYHNVVFCVVDVDDAPDIAELCNIKAMPTFIFFKNNEKVGEVMGANKDHLEKTLKD 103
BLAST of Thioredoxin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007779.1 (pep scaffold:Pmarinus_7.0:GL477155:15795:22678:-1 gene:ENSPMAG00000007027.1 transcript:ENSPMAT00000007779.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 54.299 bits (129), Expect = 1.637e-10 Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 111 TEFDELLA-SCDKLIVVDFTATWCGPCQKIAPVFNTLSQ-EFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 ++FDE+ + +LI++ FTA WCGPCQ+I ++T+++ E + VF +VDVD+ D + MPTF F+KD + G S+ LRK I Sbjct: 9 SDFDEIKGCAGSRLIILFFTAKWCGPCQQIKEPYHTMAEKEEYNAVFCEVDVDEAADLLSSFGINCMPTFVFFKDGIQLEKLEGGSQGNLRKRI 102
BLAST of Thioredoxin vs. Ensembl Sea Lamprey
Match: pdia4 (protein disulfide isomerase family A, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5493]) HSP 1 Score: 44.669 bits (104), Expect = 3.610e-6 Identity = 27/92 (29.35%), Postives = 49/92 (53.26%), Query Frame = 3 Query: 102 VTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEF----PXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASE 365 +T + FDE++ D +I+V+F A WCG C+K+AP + +QE P + KVD ++ ++ V+ PT ++ + ++G E Sbjct: 176 LTESNFDEIVNDAD-IILVEFYAPWCGHCKKLAPEYEKAAQELSKNTPPIPLAKVDATVESELGKRFGVSGYPTLKLFRKGKA-YDYNGPRE 265
BLAST of Thioredoxin vs. Ensembl Yeast
Match: TRX2 (Cytoplasmic thioredoxin isoenzyme; part of thioredoxin system which protects cells against oxidative and reductive stress; forms LMA1 complex with Pbi2p; acts as a cofactor for Tsa1p; required for ER-Golgi transport and vacuole inheritance; with Trx1p, facilitates mitochondrial import of small Tims Tim9p, Tim10p, Tim13p by maintaining them in reduced form; abundance increases under DNA replication stress; TRX2 has a paralog, TRX1, that arose from the whole genome duplication [Source:SGD;Acc:S000003441]) HSP 1 Score: 85.5001 bits (210), Expect = 9.251e-23 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDN 395 MV +L + +E+D LAS DKL+VVDF ATWCGPC+ IAP+ ++++ D F K+DVD+ +D A+K +V+SMPT FYK + GA+ +++AI N Sbjct: 1 MVTQLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAIASN 103
BLAST of Thioredoxin vs. Ensembl Yeast
Match: TRX1 (Cytoplasmic thioredoxin isoenzyme; part of thioredoxin system which protects cells against oxidative and reductive stress; forms LMA1 complex with Pbi2p; acts as a cofactor for Tsa1p; required for ER-Golgi transport and vacuole inheritance; with Trx2p, facilitates mitochondrial import of small Tims Tim9p, Tim10p, Tim13p by maintaining them in reduced form; abundance increases iunder DNA replication stress; TRX1 has a paralog, TRX2, that arose from the whole genome duplication [Source:SGD;Acc:S000004033]) HSP 1 Score: 77.7962 bits (190), Expect = 7.588e-20 Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDN 395 MV + T +EFD +A DKL+VVDF ATWCGPC+ IAP+ S+++P F K+DVD+ D A+K +V++MPT +K+ + GA+ +++AI N Sbjct: 1 MVTQFKTASEFDSAIAQ-DKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGANPAAIKQAIAAN 102
BLAST of Thioredoxin vs. Ensembl Yeast
Match: TRX3 (Mitochondrial thioredoxin; highly conserved oxidoreductase required to maintain the redox homeostasis of the cell, forms the mitochondrial thioredoxin system with Trr2p, redox state is maintained by both Trr2p and Glr1p [Source:SGD;Acc:S000000679]) HSP 1 Score: 73.9442 bits (180), Expect = 5.086e-18 Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 3 Query: 90 VRELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITD 392 + +L +TEF L+ DKL V+DF ATWCGPC+ + P L Q +PDV FVK DVD++ D A++C+VT+MPTF KD L + GA+ L K I D Sbjct: 27 ITKLTNLTEFRNLIKQNDKL-VIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGANPTALEKGIKD 126
BLAST of Thioredoxin vs. Ensembl Nematostella
Match: EDO46139 (Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A7RQN2]) HSP 1 Score: 78.1814 bits (191), Expect = 1.466e-19 Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 3 Query: 96 ELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRK 380 +L T EFD+ L +++ +DFTATWCGPC+ I P F +++EF V KVDVD N++TAE +T+MPTF FYK+ + + GASE KL++ Sbjct: 3 QLNTKGEFDKFLKD-NEVAAIDFTATWCGPCRMIGPKFEEMAKEFKGVKCAKVDVDVNSETAESEGITAMPTFRFYKNGEMVDEVVGASESKLKE 96
BLAST of Thioredoxin vs. Ensembl Nematostella
Match: EDO33372 (Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A7SSF5]) HSP 1 Score: 77.411 bits (189), Expect = 3.058e-19 Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 E+ + +L+V+DFTATWCGPC+ IAPVF LS +F DVVF+KVDVD+ TAE C + +MPTFHFY + + GA L I Sbjct: 19 EIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMDVVFLKVDVDQCQLTAESCGIRAMPTFHFYHNKAKIDELRGADPGALENKI 106
BLAST of Thioredoxin vs. Ensembl Nematostella
Match: EDO45413 (Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A7RT76]) HSP 1 Score: 69.707 bits (169), Expect = 3.912e-16 Identity = 45/105 (42.86%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 90 VRELVTVTEFDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLS-QEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 V+E+ EF+ ++ + DKL+V+DF A WCGPC++I P F ++ +EF DV F K+DVD+ + +E ++T+MPTF FYK+ + GA+E KLR+ I K Sbjct: 12 VKEIEERAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALEEFKDVFFAKIDVDELEELSEDEQITAMPTFVFYKNGQKLEKLVGANEVKLRELILKYK 116
BLAST of Thioredoxin vs. Ensembl Nematostella
Match: EDO41852 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S3A4]) HSP 1 Score: 73.1738 bits (178), Expect = 4.151e-16 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 3 Query: 93 RELVTVTEFD-----ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGAS----EDKLRKAITDNK 398 R V V E D EL + KL+V DFTA+WCGPC+ IAPV++ LS+++ VF+K+DVD + A K VT+MPTF F+K+ + GA ED ++K I D + Sbjct: 6 RGNVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYKQAVFLKIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKWIGDGE 116
BLAST of Thioredoxin vs. Ensembl Nematostella
Match: EDO47340 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RMG9]) HSP 1 Score: 45.4394 bits (106), Expect = 2.754e-6 Identity = 28/91 (30.77%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 111 TEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEF---PXXXXXXXXXXXXXXTAEKCKVTSMPTFHFY-KDNTLKHQFSGASEDK 371 + FD+++ + D ++V+F A WCG C+ +APV+ + + F P+ V KVD D ++ +K V+ PT F+ K N ++S +++ Sbjct: 148 SNFDKIVKNPDNNVLVEFFAPWCGHCKNLAPVYEKVGEAFKNEPNCVIAKVDADAHSALGQKYGVSGYPTLKFFSKTNKDGEEYSSGRDEQ 238
BLAST of Thioredoxin vs. Ensembl Medaka
Match: ENSORLT00000009496.2 (thioredoxin [Source:NCBI gene;Acc:101173415]) HSP 1 Score: 77.7962 bits (190), Expect = 6.933e-19 Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASC-DKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEK-CKVTSMPTFHFYKDNTLKHQFSGAS----EDKLR 377 MVRE+ + EF ++L DKL+VVDFTA+WCGPC++IAP++ +S+ + V + VD + C++ MPTFHFYK +FSGA+ E+KL+ Sbjct: 1 MVREVADLAEFKKILEDAGDKLVVVDFTASWCGPCKQIAPLYKQMSESDDNKNVVFLKVDVDEADVSVFCEIKCMPTFHFYKGGKKVDEFSGANVATLEEKLK 103
BLAST of Thioredoxin vs. Ensembl Medaka
Match: txnl1 (thioredoxin like 1 [Source:NCBI gene;Acc:101158293]) HSP 1 Score: 59.6918 bits (143), Expect = 5.664e-11 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 EL A+ +L+VV FT C PC +I+P FN LS ++P VVF++VDV TA +++ PTF F+++ Q+ GA L + I Sbjct: 16 ELAAAGSRLVVVKFTMAGCRPCVRISPAFNALSNKYPHVVFLEVDVHVCQATAAANNISATPTFLFFRNRVRVDQYQGADAAGLEEKI 103
BLAST of Thioredoxin vs. Ensembl Medaka
Match: txnl1 (thioredoxin like 1 [Source:NCBI gene;Acc:101158293]) HSP 1 Score: 59.6918 bits (143), Expect = 8.018e-11 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 3 Query: 123 ELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 EL A+ +L+VV FT C PC +I+P FN LS ++P VVF++VDV TA +++ PTF F+++ Q+ GA L + I Sbjct: 16 ELAAAGSRLVVVKFTMAGCRPCVRISPAFNALSNKYPHVVFLEVDVHVCQATAAANNISATPTFLFFRNRVRVDQYQGADAAGLEEKI 103
BLAST of Thioredoxin vs. Planmine SMEST
Match: SMESG000030342.1 (SMESG000030342.1) HSP 1 Score: 182.956 bits (463), Expect = 1.902e-60 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 3 Query: 87 MVRELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 398 MVRELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPDVVFVKVDVDKNNDTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK Sbjct: 1 MVRELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPDVVFVKVDVDKNNDTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK 104
BLAST of Thioredoxin vs. Planmine SMEST
Match: SMESG000033877.1 (SMESG000033877.1) HSP 1 Score: 71.633 bits (174), Expect = 3.039e-15 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 132 ASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK*TMN*TPFI 425 AS +KL+V+DF ATWCGPC+ IAP + LS +FP+V F+KVDV+K AE+ V +MPTF F K+ + GA+ L +T++ + TPF+ Sbjct: 24 ASVNKLVVIDFYATWCGPCKNIAPFVHRLSVKFPNVTFLKVDVEKFPVIAERYNVNAMPTFIFLKNKIKMDELKGANASVLEAKVTEHAGS---TPFL 118
BLAST of Thioredoxin vs. Planmine SMEST
Match: SMESG000033877.1 (SMESG000033877.1) HSP 1 Score: 71.633 bits (174), Expect = 3.272e-15 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 132 ASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAITDNK*TMN*TPFI 425 AS +KL+V+DF ATWCGPC+ IAP + LS +FP+V F+KVDV+K AE+ V +MPTF F K+ + GA+ L +T++ + TPF+ Sbjct: 24 ASVNKLVVIDFYATWCGPCKNIAPFVHRLSVKFPNVTFLKVDVEKFPVIAERYNVNAMPTFIFLKNKIKMDELKGANASVLEAKVTEHAGS---TPFL 118
BLAST of Thioredoxin vs. Planmine SMEST
Match: SMESG000039109.1 (SMESG000039109.1) HSP 1 Score: 62.7734 bits (151), Expect = 3.287e-13 Identity = 40/99 (40.40%), Postives = 66/99 (66.67%), Query Frame = 3 Query: 87 MVRELVTVTEFDELL-ASCDKLIVVDFTATWCGPCQKIAPVFNTLSQ--EFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKL 374 M + + EF + + + KL++VDF A WCGPC+ ++P F+ ++ +F DV+F+KVDVD+ + AEK ++ MPTF F+++ +FSGA++DKL Sbjct: 1 MATSVESEEEFQDFIDGNGSKLVIVDFWAEWCGPCRLMSPAFDKFAKDSQFKDVIFLKVDVDELGELAEKYDISCMPTFIFFRNGEKIDEFSGANKDKL 99
BLAST of Thioredoxin vs. Planmine SMEST
Match: SMESG000023196.1 (SMESG000023196.1) HSP 1 Score: 58.9214 bits (141), Expect = 9.402e-12 Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 3 Query: 150 IVVDFTATWCGPCQKIAPVFNTLSQEFPXXXXXXXXXXXXXXTAEKCKVTSMPTFHFYKDNTLKHQFSGASEDKLRKAI 386 I+ DF+A+WCGPC IAP++ LS+ + + F+K+DVD +D A +TS+PTF F+ H GA ++L+ + Sbjct: 14 IIADFSASWCGPCNNIAPIYEDLSETYDKISFLKIDVDSQSDIATLYNITSLPTFVFFNHGAQIHMIIGADVNQLKSNL 92 The following BLAST results are available for this feature:
BLAST of Thioredoxin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Thioredoxin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Thioredoxin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Thioredoxin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Thioredoxin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Thioredoxin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Thioredoxin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Thioredoxin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Thioredoxin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of Thioredoxin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of Thioredoxin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 3
BLAST of Thioredoxin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Thioredoxin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of Thioredoxin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000901 ID=SMED30000901|Name=Thioredoxin|organism=Schmidtea mediterranea sexual|type=transcript|length=508bpback to top protein sequence of SMED30000901-orf-1 >SMED30000901-orf-1 ID=SMED30000901-orf-1|Name=SMED30000901-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=105bp MVRELVTVTEFDELLASCDKLIVVDFTATWCGPCQKIAPVFNTLSQEFPDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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