Protein YIPF

Overview


Name	Protein YIPF
Smed ID	SMED30000858
Length (bp)	953

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Protein YIPF (SMED30000858) t-SNE clustered cells

Violin plots show distribution of expression levels for Protein YIPF (SMED30000858) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Protein YIPF (SMED30000858) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Protein YIPF (SMED30000858) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30000858

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication	Specimen	Lifecycle	Evidence
posterior side	SMED30000858	SMESG000025076.1	dd_Smed_v4_3454_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
posterior muscle cell	SMED30000858	SMESG000025076.1	dd_Smed_v4_3454_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of Protein YIPF vs. Ensembl Human
Match: YIPF1 (Yip1 domain family member 1 [Source:HGNC Symbol;Acc:HGNC:25231])

HSP 1 Score: 177.948 bits (450), Expect = 3.213e-53
Identity = 98/264 (37.12%), Postives = 152/264 (57.58%), Query Frame = 3

Query:   81 NVEYTKLEI-DKDEFNNDLRSQPLNANFNSSEESVADNEQ--------ITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
            N + T + I D  E        P  +     +E + +++           KSSP  W+F++YQ  FD+DT  V  R+  S +P P   +++  I   PDLYGPFW C TL+  IAI+GN++N+  H   + +H+  +F K+S+AA  IY+Y W++PL +WG      SK   I   SFLE++ ++GYSL IYIPT++LW+I     +W+LV++AL +SG +L +  W +    N++V+   I  + L+H LL+VG + YFF  P
Sbjct:   22 NPDATTVNIEDPGETPKHQPGSPRGSGREEDDELLGNDDSDKTELLAGQKKSSP-FWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAP 284

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Query:   81 NVEYTKLEI-DKDEFNNDLRSQPLNANFNSSEESVADNEQ--------ITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
            N + T + I D  E        P  +     +E + +++           KSSP  W+F++YQ  FD+DT  V  R+  S +P P   +++  I   PDLYGPFW C TL+  IAI+GN++N+  H   + +H+  +F K+S+AA  IY+Y W++PL +WG      SK   I   SFLE++ ++GYSL IYIPT++LW+I     +W+LV++AL +SG +L +  W +    N++V+   I  + L+H LL+VG + YFF  P
Sbjct:   22 NPDATTVNIEDPGETPKHQPGSPRGSGREEDDELLGNDDSDKTELLAGQKKSSP-FWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAP 284

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BLAST of Protein YIPF vs. Ensembl Human
Match: YIPF2 (Yip1 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:28476])

HSP 1 Score: 137.502 bits (345), Expect = 1.289e-37
Identity = 82/211 (38.86%), Postives = 127/211 (60.19%), Query Frame = 3

Query:  213 PALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNH---HWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKF-KMIKES----SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFH 821
            P  W+F +YQ+ FD+DT  VL R+  S +P P   +++  +  +PDLYGPFW C TL   +A+ GN+      A R     H+   F K+++A I+IY Y W++PL +WG  ++ K ++E     +FLE + ++GYSL ++IP  +LW+I V W QWL   +AL LS   L+  +W       + V+ ++++VV L+H LLA+G  LYFF 
Sbjct:   75 PGFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLT--LVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLALWGFLRWRKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTLWPVVREDTRLVATVLLSVVVLLHALLAMGCKLYFFQ 283

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Query:  213 PALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNH---HWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKF-KMIKES----SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFH 821
            P  W+F +YQ+ FD+DT  VL R+  S +P P   +++  +  +PDLYGPFW C TL   +A+ GN+      A R     H+   F K+++A I+IY Y W++PL +WG  ++ K ++E     +FLE + ++GYSL ++IP  +LW+I V W QWL   +AL LS   L+  +W       + V+ ++++VV L+H LLA+G  LYFF 
Sbjct:   75 PGFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLT--LVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLALWGFLRWRKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTLWPVVREDTRLVATVLLSVVVLLHALLAMGCKLYFFQ 283

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BLAST of Protein YIPF vs. Ensembl Human
Match: YIPF2 (Yip1 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:28476])

HSP 1 Score: 107.842 bits (268), Expect = 2.501e-27
Identity = 55/143 (38.46%), Postives = 87/143 (60.84%), Query Frame = 3

Query:  213 PALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNH---HWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKF-KMIKES----SFLELLTLFGYSLAIYIP 617
            P  W+F +YQ+ FD+DT  VL R+  S +P P   +++  +  +PDLYGPFW C TL   +A+ GN+      A R     H+   F K+++A I+IY Y W++PL +WG  ++ K ++E     +FLE + ++GYSL ++IP
Sbjct:   75 PGFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLT--LVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLALWGFLRWRKGVQERMGPYTFLETVCIYGYSLFVFIP 215

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BLAST of Protein YIPF vs. Ensembl Celegans
Match: Y25C1A.7 (pep chromosome:WBcel235:II:3065219:3071080:-1 gene:WBGene00021294.1 transcript:Y25C1A.7a.3 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y25C1A.7)

HSP 1 Score: 133.65 bits (335), Expect = 6.555e-37
Identity = 79/231 (34.20%), Postives = 136/231 (58.87%), Query Frame = 3

Query:  177 SVADNEQITKSSPA--LWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI---SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSY-GTANKQVSFLIITVVALMHTLLAVGFMLYFF---HVPATSKP 842
             V D+ Q T S+     +SF++YQ  FD++T  V++R++ S IP+ +  Y++  +   PDL+GPFW   TL+  I I GN+A +         +  DF  ++ A+  I+ Y  I+PL ++G+    + +++    +++L+ L+GYSLAI+IP S+LW++ + WF+W L+  ++ LSG VL  A+W +     NK ++F  +  V ++H LLA  F +YFF   H+   + P
Sbjct:   47 GVFDDSQSTTSTRKGNFFSFEYYQQFFDVETDQVIKRLLNSVIPT-HRNYIQDFLQPIPDLWGPFWVSVTLVFAIGIFGNLAQFIENDGAKGTYGSDFRMVTSASTLIFLYVVIVPLLLYGLLWNRRSELLHP--YVDLVCLYGYSLAIFIPVSVLWIVDIGWFRWALIFASVGLSGTVLARAIWPAVQNDNNKMIAFGTVISVVVLHFLLAFTFKVYFFDSMHIVVVASP 274

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BLAST of Protein YIPF vs. Ensembl Celegans
Match: Y25C1A.7 (pep chromosome:WBcel235:II:3065219:3071381:-1 gene:WBGene00021294.1 transcript:Y25C1A.7a.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y25C1A.7)

HSP 1 Score: 133.65 bits (335), Expect = 6.555e-37
Identity = 79/231 (34.20%), Postives = 136/231 (58.87%), Query Frame = 3

Query:  177 SVADNEQITKSSPA--LWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI---SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSY-GTANKQVSFLIITVVALMHTLLAVGFMLYFF---HVPATSKP 842
             V D+ Q T S+     +SF++YQ  FD++T  V++R++ S IP+ +  Y++  +   PDL+GPFW   TL+  I I GN+A +         +  DF  ++ A+  I+ Y  I+PL ++G+    + +++    +++L+ L+GYSLAI+IP S+LW++ + WF+W L+  ++ LSG VL  A+W +     NK ++F  +  V ++H LLA  F +YFF   H+   + P
Sbjct:   47 GVFDDSQSTTSTRKGNFFSFEYYQQFFDVETDQVIKRLLNSVIPT-HRNYIQDFLQPIPDLWGPFWVSVTLVFAIGIFGNLAQFIENDGAKGTYGSDFRMVTSASTLIFLYVVIVPLLLYGLLWNRRSELLHP--YVDLVCLYGYSLAIFIPVSVLWIVDIGWFRWALIFASVGLSGTVLARAIWPAVQNDNNKMIAFGTVISVVVLHFLLAFTFKVYFFDSMHIVVVASP 274

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BLAST of Protein YIPF vs. Ensembl Celegans
Match: Y25C1A.7 (pep chromosome:WBcel235:II:3064929:3071062:-1 gene:WBGene00021294.1 transcript:Y25C1A.7a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y25C1A.7)

HSP 1 Score: 133.65 bits (335), Expect = 6.555e-37
Identity = 79/231 (34.20%), Postives = 136/231 (58.87%), Query Frame = 3

Query:  177 SVADNEQITKSSPA--LWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI---SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSY-GTANKQVSFLIITVVALMHTLLAVGFMLYFF---HVPATSKP 842
             V D+ Q T S+     +SF++YQ  FD++T  V++R++ S IP+ +  Y++  +   PDL+GPFW   TL+  I I GN+A +         +  DF  ++ A+  I+ Y  I+PL ++G+    + +++    +++L+ L+GYSLAI+IP S+LW++ + WF+W L+  ++ LSG VL  A+W +     NK ++F  +  V ++H LLA  F +YFF   H+   + P
Sbjct:   47 GVFDDSQSTTSTRKGNFFSFEYYQQFFDVETDQVIKRLLNSVIPT-HRNYIQDFLQPIPDLWGPFWVSVTLVFAIGIFGNLAQFIENDGAKGTYGSDFRMVTSASTLIFLYVVIVPLLLYGLLWNRRSELLHP--YVDLVCLYGYSLAIFIPVSVLWIVDIGWFRWALIFASVGLSGTVLARAIWPAVQNDNNKMIAFGTVISVVVLHFLLAFTFKVYFFDSMHIVVVASP 274

[Close]

BLAST of Protein YIPF vs. Ensembl Celegans
Match: Y25C1A.7 (pep chromosome:WBcel235:II:3064929:3070942:-1 gene:WBGene00021294.1 transcript:Y25C1A.7b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y25C1A.7)

HSP 1 Score: 133.65 bits (335), Expect = 7.246e-37
Identity = 79/231 (34.20%), Postives = 136/231 (58.87%), Query Frame = 3

Query:  177 SVADNEQITKSSPA--LWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI---SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSY-GTANKQVSFLIITVVALMHTLLAVGFMLYFF---HVPATSKP 842
             V D+ Q T S+     +SF++YQ  FD++T  V++R++ S IP+ +  Y++  +   PDL+GPFW   TL+  I I GN+A +         +  DF  ++ A+  I+ Y  I+PL ++G+    + +++    +++L+ L+GYSLAI+IP S+LW++ + WF+W L+  ++ LSG VL  A+W +     NK ++F  +  V ++H LLA  F +YFF   H+   + P
Sbjct:   57 GVFDDSQSTTSTRKGNFFSFEYYQQFFDVETDQVIKRLLNSVIPT-HRNYIQDFLQPIPDLWGPFWVSVTLVFAIGIFGNLAQFIENDGAKGTYGSDFRMVTSASTLIFLYVVIVPLLLYGLLWNRRSELLHP--YVDLVCLYGYSLAIFIPVSVLWIVDIGWFRWALIFASVGLSGTVLARAIWPAVQNDNNKMIAFGTVISVVVLHFLLAFTFKVYFFDSMHIVVVASP 284

[Close]

BLAST of Protein YIPF vs. Ensembl Celegans
Match: Y25C1A.7 (pep chromosome:WBcel235:II:3062542:3071080:-1 gene:WBGene00021294.1 transcript:Y25C1A.7c.3 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y25C1A.7)

HSP 1 Score: 134.035 bits (336), Expect = 6.387e-36
Identity = 77/220 (35.00%), Postives = 132/220 (60.00%), Query Frame = 3

Query:  177 SVADNEQITKSSPA--LWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI---SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSS-YGTANKQVSFLIITVVALMHTLLAVGFMLYFF 818
             V D+ Q T S+     +SF++YQ  FD++T  V++R++ S IP+ +  Y++  +   PDL+GPFW   TL+  I I GN+A +         +  DF  ++ A+  I+ Y  I+PL ++G+    + +++    +++L+ L+GYSLAI+IP S+LW++ + WF+W L+  ++ LSG VL  A+W +     NK ++F  +  V ++H LLA  F +YFF
Sbjct:   47 GVFDDSQSTTSTRKGNFFSFEYYQQFFDVETDQVIKRLLNSVIPT-HRNYIQDFLQPIPDLWGPFWVSVTLVFAIGIFGNLAQFIENDGAKGTYGSDFRMVTSASTLIFLYVVIVPLLLYGLLWNRRSELLH--PYVDLVCLYGYSLAIFIPVSVLWIVDIGWFRWALIFASVGLSGTVLARAIWPAVQNDNNKMIAFGTVISVVVLHFLLAFTFKVYFF 263

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BLAST of Protein YIPF vs. Ensembl Fly
Match: CG4645 (gene:FBgn0030435 transcript:FBtr0343649)

HSP 1 Score: 155.606 bits (392), Expect = 2.825e-44
Identity = 93/217 (42.86%), Postives = 127/217 (58.53%), Query Frame = 3

Query:  222 WSFQFYQNLFDIDTRDVLRRVVYSFIPS-PNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES--------------SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
            ++ ++YQ  F++DT  VL R+  S IP   +G YL+  I + PDLYGPFW   TLI +IAI+GNIA+Y   A   + W Y+F  +S AA +I+ Y  I+P  +W + K+ +                  S L L+ ++GYSLAIYIP S+LWVI +S  QWLLVI A  LSG VLI  +  +    N Q S  +I  +   H +LA GF+LYFFH P
Sbjct:  108 FTIEYYQQFFNVDTYMVLERIANSMIPKRASGNYLRMNIGENPDLYGPFWITVTLIFSIAISGNIASYLQQATDAYKWHYNFHLVSYAATSIFLYANILPAVLWALFKYSLKPVDSADAVETDSASYMPSLLSLMCIYGYSLAIYIPVSILWVINISLLQWLLVITAALLSGTVLIAVL--TPALRNSQFSLFLIVGILSAHVVLAAGFLLYFFHNP 322

[Close]

BLAST of Protein YIPF vs. Ensembl Fly
Match: CG4645 (gene:FBgn0030435 transcript:FBtr0073692)

HSP 1 Score: 155.606 bits (392), Expect = 2.825e-44
Identity = 93/217 (42.86%), Postives = 127/217 (58.53%), Query Frame = 3

Query:  222 WSFQFYQNLFDIDTRDVLRRVVYSFIPS-PNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES--------------SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
            ++ ++YQ  F++DT  VL R+  S IP   +G YL+  I + PDLYGPFW   TLI +IAI+GNIA+Y   A   + W Y+F  +S AA +I+ Y  I+P  +W + K+ +                  S L L+ ++GYSLAIYIP S+LWVI +S  QWLLVI A  LSG VLI  +  +    N Q S  +I  +   H +LA GF+LYFFH P
Sbjct:  108 FTIEYYQQFFNVDTYMVLERIANSMIPKRASGNYLRMNIGENPDLYGPFWITVTLIFSIAISGNIASYLQQATDAYKWHYNFHLVSYAATSIFLYANILPAVLWALFKYSLKPVDSADAVETDSASYMPSLLSLMCIYGYSLAIYIPVSILWVINISLLQWLLVITAALLSGTVLIAVL--TPALRNSQFSLFLIVGILSAHVVLAAGFLLYFFHNP 322

[Close]

BLAST of Protein YIPF vs. Ensembl Fly
Match: CG4645 (gene:FBgn0030435 transcript:FBtr0346316)

HSP 1 Score: 155.606 bits (392), Expect = 2.825e-44
Identity = 93/217 (42.86%), Postives = 127/217 (58.53%), Query Frame = 3

Query:  222 WSFQFYQNLFDIDTRDVLRRVVYSFIPS-PNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES--------------SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
            ++ ++YQ  F++DT  VL R+  S IP   +G YL+  I + PDLYGPFW   TLI +IAI+GNIA+Y   A   + W Y+F  +S AA +I+ Y  I+P  +W + K+ +                  S L L+ ++GYSLAIYIP S+LWVI +S  QWLLVI A  LSG VLI  +  +    N Q S  +I  +   H +LA GF+LYFFH P
Sbjct:  108 FTIEYYQQFFNVDTYMVLERIANSMIPKRASGNYLRMNIGENPDLYGPFWITVTLIFSIAISGNIASYLQQATDAYKWHYNFHLVSYAATSIFLYANILPAVLWALFKYSLKPVDSADAVETDSASYMPSLLSLMCIYGYSLAIYIPVSILWVINISLLQWLLVITAALLSGTVLIAVL--TPALRNSQFSLFLIVGILSAHVVLAAGFLLYFFHNP 322

[Close]

BLAST of Protein YIPF vs. Ensembl Zebrafish
Match: yipf2 (Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124])

HSP 1 Score: 183.341 bits (464), Expect = 1.505e-55
Identity = 98/272 (36.03%), Postives = 154/272 (56.62%), Query Frame = 3

Query:   96 KLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSK---------PGANSSSSL 866
            +L++  DE N    S+ L                  K +   W+F++YQ+ F++DT  VL R+  S +P P   ++K  I   PDLYGPFW C TL+ ++AI+GN++ +     N  +H+R  F ++S+AA+ ++ Y W++PL VWG      S  + I   +FLE + ++GYSL IYIPTS+LW I  +W QWLL++VA+ +SG VL++  W +     K  +F  + V+  +H LLAVG  LYFFH    ++         P +N +++L
Sbjct:   46 RLDLSDDEENQQESSELLGGE---------------KKTGGFWTFEYYQSFFNVDTVQVLDRIKGSVMPLPGRNFIKHHIRSNPDLYGPFWICVTLVFSLAISGNLSTFLSEMGNPEYHYRPQFHRVSIAAVTVFLYAWLVPLGVWGFLTWRQSVERQINGYTFLETVCVYGYSLFIYIPTSVLWTIPFNWLQWLLIVVAMVISGSVLVITFWPAVRDDTKLTAFATVAVIVALHALLAVGCKLYFFHTAEDTRSPHPGQHITPASNHTTAL 302

[Close]

BLAST of Protein YIPF vs. Ensembl Zebrafish
Match: yipf1 (Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35])

HSP 1 Score: 163.696 bits (413), Expect = 6.263e-48
Identity = 92/272 (33.82%), Postives = 151/272 (55.51%), Query Frame = 3

Query:   87 EYTKLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITK------SSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFK-----MIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKPGANSSSSL 866
            E T + ID D   +  +      +F   E+   +N   TK       S   W+F++YQ LFD+DT  V  R++ S +P P   +++  +   PDLYGPFW C TL+  IAI+GNI+++  H     + +  DFGK+++AA AIYSY  ++PL +WG   ++      +   SF++++ ++GYSL+IYIP  ++W+I     +W  + VA+ LSG VL++  W +      ++   I++ + ++H LLAVG    FF    T  P A+++  L
Sbjct:   25 ESTTVTID-DPIKSRKQRNAAGTDFEGEEDDPLENSDKTKLLSGERKSAPFWTFEYYQTLFDVDTHQVKSRILGSVVPWPRRNFVEVYLRSNPDLYGPFWICATLVFAIAISGNISSFLRHHGQPKYKYVPDFGKVTMAATAIYSYALLVPLALWGFLTWRNRTIASLVSYSFMQIVCVYGYSLSIYIPAVIVWIIPSEGLRWCSIAVAMCLSGSVLVMTFWPAIREDKPRIIIAILSTIVILHVLLAVGCKACFFSTYETD-PSADNNEPL 294

[Close]

BLAST of Protein YIPF vs. Ensembl Zebrafish
Match: yipf1 (Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35])

HSP 1 Score: 159.844 bits (403), Expect = 1.121e-46
Identity = 86/250 (34.40%), Postives = 140/250 (56.00%), Query Frame = 3

Query:   87 EYTKLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITK------SSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVG 800
            E T + ID D   +  +      +F   E+   +N   TK       S   W+F++YQ LFD+DT  V  R++ S +P P   +++  +   PDLYGPFW C TL+  IAI+GNI+++  H     + +  DFGK+++AA AIYSY  ++PL +WG           +   SF++++ ++GYSL+IYIP  ++W+I     +W  + VA+ LSG VL++  W +      ++   I++ + ++H LLAVG
Sbjct:   25 ESTTVTID-DPIKSRKQRNAAGTDFEGEEDDPLENSDKTKLLSGERKSAPFWTFEYYQTLFDVDTHQVKSRILGSVVPWPRRNFVEVYLRSNPDLYGPFWICATLVFAIAISGNISSFLRHHGQPKYKYVPDFGKVTMAATAIYSYALLVPLALWGFLTWRNRTIASLVSYSFMQIVCVYGYSLSIYIPAVIVWIIPSEGLRWCSIAVAMCLSGSVLVMTFWPAIREDKPRIIIAILSTIVILHVLLAVG 273

[Close]

BLAST of Protein YIPF vs. Ensembl Zebrafish
Match: yipf1 (Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35])

HSP 1 Score: 102.064 bits (253), Expect = 1.308e-25
Identity = 58/156 (37.18%), Postives = 88/156 (56.41%), Query Frame = 3

Query:   87 EYTKLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITK------SSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWG 533
            E T + ID D   +  +      +F   E+   +N   TK       S   W+F++YQ LFD+DT  V  R++ S +P P   +++  +   PDLYGPFW C TL+  IAI+GNI+++  H     + +  DFGK+++AA AIYSY  ++PL +WG
Sbjct:   25 ESTTVTID-DPIKSRKQRNAAGTDFEGEEDDPLENSDKTKLLSGERKSAPFWTFEYYQTLFDVDTHQVKSRILGSVVPWPRRNFVEVYLRSNPDLYGPFWICATLVFAIAISGNISSFLRHHGQPKYKYVPDFGKVTMAATAIYSYALLVPLALWG 179

[Close]

BLAST of Protein YIPF vs. Ensembl Zebrafish
Match: yipf2 (Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124])

HSP 1 Score: 97.8265 bits (242), Expect = 3.773e-24
Identity = 51/147 (34.69%), Postives = 83/147 (56.46%), Query Frame = 3

Query:   96 KLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWG 533
            +L++  DE N    S+ L                  K +   W+F++YQ+ F++DT  VL R+  S +P P   ++K  I   PDLYGPFW C TL+ ++AI+GN++ +     N  +H+R  F ++S+AA+ ++ Y W++PL VWG
Sbjct:   46 RLDLSDDEENQQESSELLGGE---------------KKTGGFWTFEYYQSFFNVDTVQVLDRIKGSVMPLPGRNFIKHHIRSNPDLYGPFWICVTLVFSLAISGNLSTFLSEMGNPEYHYRPQFHRVSIAAVTVFLYAWLVPLGVWG 177

[Close]

BLAST of Protein YIPF vs. Ensembl Xenopus
Match: rab33b (RAB33B, member RAS oncogene family [Source:Xenbase;Acc:XB-GENE-491301])

HSP 1 Score: 182.57 bits (462), Expect = 4.208e-55
Identity = 98/249 (39.36%), Postives = 150/249 (60.24%), Query Frame = 3

Query:  123 NNDLRSQPLNANFNSSEE-----SVADNEQI---TKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
              + RS+    N +  ++      V+D  ++    K     W+F +YQ  FDIDT  VL R+  S +P P   +++  +   PDLYGPFW C TLI TI I+GN++N+  H     +H+  +F K+S+AA AIY+Y W++PL +WG      SK   +   SFLE++ ++GYSL IYIPTS++W+I     +W+L+ +A++LSG VLIL  W +    N++++   + V+ L+H LLAVGF+ YFF  P
Sbjct:   32 ETESRSKGHRGNRSQEDDHLMSGEVSDKTELLGGQKKQAPFWTFDYYQTFFDIDTLQVLDRIKGSVLPMPGRNFIRLYVRSNPDLYGPFWICATLIFTITISGNLSNFLLHQGKPKYHYVPEFRKVSIAATAIYAYTWLVPLALWGFLTWRQSKVMSMVSYSFLEIVCVYGYSLFIYIPTSIMWIIHAETLRWVLMALAMSLSGAVLILTFWPAVREENRKIAVTTLVVIMLLHALLAVGFVEYFFDPP 280

[Close]

BLAST of Protein YIPF vs. Ensembl Xenopus
Match: ddit3 (DNA damage inducible transcript 3 [Source:Xenbase;Acc:XB-GENE-1011286])

HSP 1 Score: 171.014 bits (432), Expect = 1.161e-50
Identity = 87/214 (40.65%), Postives = 137/214 (64.02%), Query Frame = 3

Query:  204 KSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANR-NHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKM-----IKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
            K + + W+FQ+YQ+ FDIDT  VL R+  S +P P   ++++ +   PDLYGPFW CTTL++T+ I GN+  Y    ++  + +  +F KLS+A +AIYSY W +PL +WG  +++      +   SF+E + ++GYSL+ Y+P ++L V+    F+W+L++VA++LS LVL+LA W      NK V   ++ ++  +H LLAVG  LYFF  P
Sbjct:   64 KKTSSFWTFQYYQDFFDIDTYQVLDRIRGSILPIPGKNFVRNHLRNNPDLYGPFWICTTLVITVTIMGNLGTYMLLHDQEGYQYSPEFHKLSVAGVAIYSYAWAVPLGLWGFLQWRKGVTPEVSSYSFMETVCIYGYSLSAYVPATVLCVVPQDIFRWILILVAMSLSSLVLVLAFWPHIRRDNKVVVISLMAIMVALHVLLAVGCKLYFFRQP 277

[Close]

BLAST of Protein YIPF vs. Ensembl Xenopus
Match: ddit3 (DNA damage inducible transcript 3 [Source:Xenbase;Acc:XB-GENE-1011286])

HSP 1 Score: 170.629 bits (431), Expect = 3.098e-50
Identity = 87/214 (40.65%), Postives = 137/214 (64.02%), Query Frame = 3

Query:  204 KSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANR-NHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKM-----IKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
            K + + W+FQ+YQ+ FDIDT  VL R+  S +P P   ++++ +   PDLYGPFW CTTL++T+ I GN+  Y    ++  + +  +F KLS+A +AIYSY W +PL +WG  +++      +   SF+E + ++GYSL+ Y+P ++L V+    F+W+L++VA++LS LVL+LA W      NK V   ++ ++  +H LLAVG  LYFF  P
Sbjct:   88 KKTSSFWTFQYYQDFFDIDTYQVLDRIRGSILPIPGKNFVRNHLRNNPDLYGPFWICTTLVITVTIMGNLGTYMLLHDQEGYQYSPEFHKLSVAGVAIYSYAWAVPLGLWGFLQWRKGVTPEVSSYSFMETVCIYGYSLSAYVPATVLCVVPQDIFRWILILVAMSLSSLVLVLAFWPHIRRDNKVVVISLMAIMVALHVLLAVGCKLYFFRQP 301

[Close]

BLAST of Protein YIPF vs. Ensembl Mouse
Match: Yipf1 (Yip1 domain family, member 1 [Source:MGI Symbol;Acc:MGI:1915532])

HSP 1 Score: 181.415 bits (459), Expect = 1.303e-54
Identity = 94/237 (39.66%), Postives = 147/237 (62.03%), Query Frame = 3

Query:  135 RSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
              + L  N +S E  +   ++  +SSP  W+F++YQ  FD+DT  V  R+  S +P P   +++  I   PDLYGPFW C TL+  IAI+GN++N+  H   + +H+  +F K+S+AA  IY+Y W++PL +WG      SK   +   SFLE++ ++GYSL IYIPT++LW+I     +W+LV++AL +SG VL++  W +    N++V+   I  + L+H LL+VG + YFF  P
Sbjct:   51 EDEELLGNNDSDETELLAGQK--RSSP-FWTFEYYQTFFDVDTYQVFDRIKGSLLPVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFQKVSIAATVIYAYAWLVPLALWGFLLWRNSKVMSMVSYSFLEIVCVYGYSLFIYIPTAVLWIIPQRVVRWVLVMIALGVSGSVLVMTFWPAVREDNRRVALATIVTIVLLHVLLSVGCLAYFFDAP 284

[Close]

BLAST of Protein YIPF vs. Ensembl Mouse
Match: Yipf1 (Yip1 domain family, member 1 [Source:MGI Symbol;Acc:MGI:1915532])

HSP 1 Score: 159.844 bits (403), Expect = 8.305e-47
Identity = 91/250 (36.40%), Postives = 142/250 (56.80%), Query Frame = 3

Query:  114 DEFNND---LRSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLF---DIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
            +EF +    L + P     N  + SV+   Q     P     +  + L    D D  +V  R+  S +P P   +++  I   PDLYGPFW C TL+  IAI+GN++N+  H   + +H+  +F K+S+AA  IY+Y W++PL +WG      SK   +   SFLE++ ++GYSL IYIPT++LW+I     +W+LV++AL +SG VL++  W +    N++V+   I  + L+H LL+VG + YFF  P
Sbjct:   10 EEFGDGATLLAANPDATTINIEDPSVSFGHQ--PRPPGSVGREEDEELLGNNDSDETEVFDRIKGSLLPVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFQKVSIAATVIYAYAWLVPLALWGFLLWRNSKVMSMVSYSFLEIVCVYGYSLFIYIPTAVLWIIPQRVVRWVLVMIALGVSGSVLVMTFWPAVREDNRRVALATIVTIVLLHVLLSVGCLAYFFDAP 257

[Close]

BLAST of Protein YIPF vs. Ensembl Mouse
Match: Yipf2 (Yip1 domain family, member 2 [Source:MGI Symbol;Acc:MGI:1922016])

HSP 1 Score: 145.976 bits (367), Expect = 4.599e-41
Identity = 88/251 (35.06%), Postives = 132/251 (52.59%), Query Frame = 3

Query:  150 NANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNH---HWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES-----SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFF------HV---PATSKPGAN 851
             A     E+      Q  K  P  W+F +YQ+ FD+DT  VL R+  S +P P   +++  +  +PDLYGPFW C TL   +A+ GN+      A R     H+   F K+++A I IY Y W++PL +WG  +++          +FLE + ++GYSL ++IPT +LW+I V W QWL   + L LS   L+  +W       + V+  +++ V L+H LLA+G  LYFF      HV   P  + P  N
Sbjct:   51 GAEVGEEEDDKTSLLQEEKPQPRFWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLT--LVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQGTRERMGLYTFLETVCVYGYSLFVFIPTVVLWLIPVQWIQWLFGALGLALSAAGLVFTLWPVVREDTRLVAAALLSTVVLLHALLALGCKLYFFQPLPLDHVVPAPQATPPSPN 299

[Close]

Query:  150 NANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNH---HWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES-----SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFF------HV---PATSKPGAN 851
             A     E+      Q  K  P  W+F +YQ+ FD+DT  VL R+  S +P P   +++  +  +PDLYGPFW C TL   +A+ GN+      A R     H+   F K+++A I IY Y W++PL +WG  +++          +FLE + ++GYSL ++IPT +LW+I V W QWL   + L LS   L+  +W       + V+  +++ V L+H LLA+G  LYFF      HV   P  + P  N
Sbjct:   51 GAEVGEEEDDKTSLLQEEKPQPRFWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLT--LVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQGTRERMGLYTFLETVCVYGYSLFVFIPTVVLWLIPVQWIQWLFGALGLALSAAGLVFTLWPVVREDTRLVAAALLSTVVLLHALLALGCKLYFFQPLPLDHVVPAPQATPPSPN 299

[Close]

Query:  150 NANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNH---HWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES-----SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFF------HV---PATSKPGAN 851
             A     E+      Q  K  P  W+F +YQ+ FD+DT  VL R+  S +P P   +++  +  +PDLYGPFW C TL   +A+ GN+      A R     H+   F K+++A I IY Y W++PL +WG  +++          +FLE + ++GYSL ++IPT +LW+I V W QWL   + L LS   L+  +W       + V+  +++ V L+H LLA+G  LYFF      HV   P  + P  N
Sbjct:   51 GAEVGEEEDDKTSLLQEEKPQPRFWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLT--LVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQGTRERMGLYTFLETVCVYGYSLFVFIPTVVLWLIPVQWIQWLFGALGLALSAAGLVFTLWPVVREDTRLVAAALLSTVVLLHALLALGCKLYFFQPLPLDHVVPAPQATPPSPN 299

[Close]

BLAST of Protein YIPF vs. UniProt/SwissProt
Match: sp|Q91VU1|YIPF1_MOUSE (Protein YIPF1 OS=Mus musculus OX=10090 GN=Yipf1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 9.112e-54
Identity = 94/237 (39.66%), Postives = 147/237 (62.03%), Query Frame = 3

Query:  135 RSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
              + L  N +S E  +   ++  +SSP  W+F++YQ  FD+DT  V  R+  S +P P   +++  I   PDLYGPFW C TL+  IAI+GN++N+  H   + +H+  +F K+S+AA  IY+Y W++PL +WG      SK   +   SFLE++ ++GYSL IYIPT++LW+I     +W+LV++AL +SG VL++  W +    N++V+   I  + L+H LL+VG + YFF  P
Sbjct:   51 EDEELLGNNDSDETELLAGQK--RSSP-FWTFEYYQTFFDVDTYQVFDRIKGSLLPVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFQKVSIAATVIYAYAWLVPLALWGFLLWRNSKVMSMVSYSFLEIVCVYGYSLFIYIPTAVLWIIPQRVVRWVLVMIALGVSGSVLVMTFWPAVREDNRRVALATIVTIVLLHVLLSVGCLAYFFDAP 284

[Close]

BLAST of Protein YIPF vs. UniProt/SwissProt
Match: sp|Q6P6G5|YIPF1_RAT (Protein YIPF1 OS=Rattus norvegicus OX=10116 GN=Yipf1 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.752e-53
Identity = 100/260 (38.46%), Postives = 153/260 (58.85%), Query Frame = 3

Query:   66 KMSFKNVEYTKLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
             +SFK+       + ++E       + L  N +   E +A  +   KSSP  W+F++YQ  FD+DT  V  R+  S +P P   +++  I   PDLYGPFW C TL+  IAI+GN++N+  H   + +H+  +F K+S+AA  IY+Y W++PL +WG      SK   I   SFLE++ ++GYSL IYIPT++LW+I     +W+LV +AL +SG VL +  W +    N++V+   I  + L+H LL+VG + YFF  P
Sbjct:   34 SVSFKHQPRPPGSLGREE-----DEELLGTNDSDETELLAGQK---KSSP-FWTFEYYQTFFDVDTYQVFDRIKGSLLPVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFQKVSIAATVIYAYAWLVPLALWGFLLWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAVLWIIPQRVIRWVLVTIALGISGSVLAMTFWPAVREDNRRVALATIVTIMLLHVLLSVGCLAYFFDAP 284

[Close]

BLAST of Protein YIPF vs. UniProt/SwissProt
Match: sp|Q9Y548|YIPF1_HUMAN (Protein YIPF1 OS=Homo sapiens OX=9606 GN=YIPF1 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.543e-52
Identity = 98/264 (37.12%), Postives = 152/264 (57.58%), Query Frame = 3

Query:   81 NVEYTKLEI-DKDEFNNDLRSQPLNANFNSSEESVADNEQ--------ITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
            N + T + I D  E        P  +     +E + +++           KSSP  W+F++YQ  FD+DT  V  R+  S +P P   +++  I   PDLYGPFW C TL+  IAI+GN++N+  H   + +H+  +F K+S+AA  IY+Y W++PL +WG      SK   I   SFLE++ ++GYSL IYIPT++LW+I     +W+LV++AL +SG +L +  W +    N++V+   I  + L+H LL+VG + YFF  P
Sbjct:   22 NPDATTVNIEDPGETPKHQPGSPRGSGREEDDELLGNDDSDKTELLAGQKKSSP-FWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAP 284

[Close]

BLAST of Protein YIPF vs. UniProt/SwissProt
Match: sp|Q5RBL0|YIPF1_PONAB (Protein YIPF1 OS=Pongo abelii OX=9601 GN=YIPF1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.932e-52
Identity = 98/264 (37.12%), Postives = 151/264 (57.20%), Query Frame = 3

Query:   81 NVEYTKLEI-DKDEFNNDLRSQPLNANFNSSEESVADNEQ--------ITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVP 827
            N + T + I D  E        P  +     +E + +++           KSSP  W+F++YQ  FD+DT  V  R+  S +P P   +++  I   PDLYGPFW C TL+  IAI+GN++N+  H   + + +  +F K+S+AA  IY+Y W++PL +WG      SK   I   SFLE++ ++GYSL IYIPT++LW+I     +W+LV++AL +SG VL +  W +    N++V+   I  + L+H LL+VG + YFF  P
Sbjct:   22 NPDATTVNIEDPGETPKHQSGSPRGSGREEDDELLGNDDSDKTELLAGQKKSSP-FWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYRYVPEFRKVSIAATTIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSVLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAP 284

[Close]

BLAST of Protein YIPF vs. UniProt/SwissProt
Match: sp|Q99LP8|YIPF2_MOUSE (Protein YIPF2 OS=Mus musculus OX=10090 GN=Yipf2 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.217e-40
Identity = 88/251 (35.06%), Postives = 132/251 (52.59%), Query Frame = 3

Query:  150 NANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNH---HWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES-----SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFF------HV---PATSKPGAN 851
             A     E+      Q  K  P  W+F +YQ+ FD+DT  VL R+  S +P P   +++  +  +PDLYGPFW C TL   +A+ GN+      A R     H+   F K+++A I IY Y W++PL +WG  +++          +FLE + ++GYSL ++IPT +LW+I V W QWL   + L LS   L+  +W       + V+  +++ V L+H LLA+G  LYFF      HV   P  + P  N
Sbjct:   51 GAEVGEEEDDKTSLLQEEKPQPRFWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLT--LVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQGTRERMGLYTFLETVCVYGYSLFVFIPTVVLWLIPVQWIQWLFGALGLALSAAGLVFTLWPVVREDTRLVAAALLSTVVLLHALLALGCKLYFFQPLPLDHVVPAPQATPPSPN 299

[Close]

BLAST of Protein YIPF vs. TrEMBL
Match: A0A0B7BA63 (Protein YIPF (Fragment) OS=Arion vulgaris OX=1028688 GN=ORF175703 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 2.424e-69
Identity = 122/286 (42.66%), Postives = 182/286 (63.64%), Query Frame = 3

Query:   69 MSFKNVEYTKLEIDKDE---FNNDLRSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES-SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKPGANSSSS---------LHRPM*SD 887
            ++F+++ +     DK E   F N   S   + + NS +  +  +E   K + + W+F +YQ  FD++T+ V +R++ S IP PN  YL   I   PDLYGPFW CTTL+ T AIAGN+ANYF  A ++++W+YDF K++ AA AI+SYWW++PL ++G+  ++  +   +FLE++ ++GYSLAIYIP S+LW IQVSW QW LV+V   LSG VL+   W S    NK+++  ++  + +MHT LA GF+LYFFHVPA + P   +S++         LHR +  D
Sbjct:   24 LNFQDIPHESRTKDKGETHEFTNFPHSAADSDDENSDQAKLLQDE---KRASSFWTFTYYQQFFDVETKQVGQRILGSMIPKPNRNYLVKQIRPNPDLYGPFWICTTLVFTTAIAGNLANYFSSAGKDYNWKYDFHKVTFAATAIFSYWWLIPLILFGVLWWRGSQTKFTFLEIICVYGYSLAIYIPISVLWAIQVSWLQWTLVVVGAVLSGSVLLQTFWPSVSEDNKKIAVGVMLFIFIMHTALAAGFVLYFFHVPAATTPAIPASNTTNITIPSSVLHRKVNQD 306

[Close]

BLAST of Protein YIPF vs. TrEMBL
Match: R7TLQ3 (Yip1 domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_178563 PE=4 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.819e-68
Identity = 124/293 (42.32%), Postives = 184/293 (62.80%), Query Frame = 3

Query:   57 SVAKMSFKNVEYTKLEIDKDEFNNDLRSQPLNANFNSSEESVADNE------QITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMP-----LFVWGISKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPA--------TSKPGANSSSSLHRPM 878
            S   + F+++ ++ +E    +    +++     +F + ++S  + +      Q  K SP+ W+F +YQ+ FD+DT  VL+R++ S +P+P   YL   I   PDLYGPFW CTTLI T AIAGN+ANYF FA +++ W YDF K+S AA A++ YWW++P     LF W  S+  +    SF E+L ++GYSLAIY+P S+LWVI V W +WLLV+  + LSG VL+L  WS+    + +V++  +  + L+H LLAVGF+LYFFHVP+        TS+P AN +SS H P+
Sbjct:   22 STDDLQFQDIPHSGVEPTSSKPAPKIQTHTFT-DFPNPDDSDDEQDRSNLLLQGVKKSPSFWTFDYYQSFFDVDTHQVLKRILGSMVPNPKVNYLDHTIRPNPDLYGPFWICTTLIFTTAIAGNLANYFAFAGKDYEWIYDFHKVSFAATAVFLYWWLVPTGLYTLFWWRGSQAGV----SFTEILCVYGYSLAIYVPISILWVIPVDWLRWLLVMAGMVLSGSVLVLTFWSAIKHDDVKVAYPCMAAIVLLHGLLAVGFVLYFFHVPSPPAAVIQPTSEPLANLTSSNHLPL 309

[Close]

BLAST of Protein YIPF vs. TrEMBL
Match: A0A1S3JVS9 (Protein YIPF OS=Lingula unguis OX=7574 GN=LOC106176574 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.813e-68
Identity = 115/254 (45.28%), Postives = 167/254 (65.75%), Query Frame = 3

Query:  108 DKDEFNNDLRSQPLNANFNSSEESVADNEQI--TKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES-SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKPGANSSS 860
            D+D   +   + P  A+   SE+ V    Q+   K  P+ W+F++YQ LFD+DT  V+ R++ S +P P   YL+S I   PDLYGPFW C TLI T AI GN+ANYFH   R++ W+YDF K++ +A AI+SYW ++PL +WG   ++      SFLE+L ++GYSLAIY+P S+LWVI +SW Q+LLVI+++ LSG VL++  W +    +K+V+   + V+ L+H LLAVGFMLYFF   + S   +N ++
Sbjct:   36 DEDGQTHTFTTFPAAAD--DSEDEVEGKPQLLTDKKQPSFWTFEYYQTLFDVDTIQVVIRILNSVVPRPKSNYLQSYIRPNPDLYGPFWICATLIFTTAITGNLANYFHTEGRDYEWKYDFHKVTFSATAIFSYWLLVPLALWGFLWWRRSSAGYSFLEILCVYGYSLAIYVPVSILWVINISWLQYLLVILSMVLSGTVLVIVFWPAVKEDDKKVALGTLLVIFLLHGLLAVGFMLYFFRFASESGSSSNVTT 287

[Close]

BLAST of Protein YIPF vs. TrEMBL
Match: A0A0L8FHV6 (Protein YIPF OS=Octopus bimaculoides OX=37653 GN=OCBIM_22019791mg PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.083e-68
Identity = 116/269 (43.12%), Postives = 173/269 (64.31%), Query Frame = 3

Query:   66 KMSFKNVEYTKLEIDKDEFNNDLRSQPLNANF---NSSEESVADNEQITKSSPAL---WSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES-SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKPGAN 851
            ++ F +++++     KD+ + +       +NF     S+E   D  ++ K    L   W F +YQ  FD+D+  V  R++ S  P+P   +LKS I   PDLYGPFW CTTL+ T AIAGN+ANYF    +N+HW+YDF K++ AA AI+SYWWI+P  ++G+  ++      SFLE+++++GYSLAIYIP S+LWV+Q++WFQWLLVI+  +LSG VL+   W +     K++++  + ++ L H LLAVGF+LYFFHVPA    G+ 
Sbjct:   24 ELQFHDIDHSLSGSRKDDIDMEKAQTHTFSNFPHSAESDEEEGDKTELLKDEKRLYPFWKFDYYQQFFDVDSNQVFWRIMGSMTPNPRRNFLKSQIRPNPDLYGPFWICTTLVFTTAIAGNLANYFQSKGQNYHWQYDFHKVTFAATAIFSYWWIIPTMLFGLLWWRGSSAGYSFLEMISVYGYSLAIYIPISILWVVQINWFQWLLVIIGASLSGGVLLFTFWPAVREDEKKIAWGAMFLILLFHALLAVGFVLYFFHVPAPIPSGSG 292

[Close]

BLAST of Protein YIPF vs. TrEMBL
Match: A0A210QJG4 (Protein YIPF OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT08732 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.184e-67
Identity = 116/271 (42.80%), Postives = 170/271 (62.73%), Query Frame = 3

Query:   69 MSFKNVEYTKLEIDKDEFNNDLRSQ-PLNANFNSSEESVADNEQITKSS---PALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES-SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKPGANSSSSL 866
            + F +  Y   + DK +    + +  P  A  +  EE++ D  ++ K     P+ W+FQ+YQ  FD++T  VL R++ S +P P   YLK+ I   PDLYGPFW CTTLI T AIAGN+ANY     + + WRYDF K++ AA AI+SYWW++P  ++    ++      SFL+LL+++GYSLAIYIP S+LWV+QV W QW+LV+V  TLSG VL L  W  +   NK+ ++ ++ ++ L+H  LAVGF LYFF+  A +  G  +S+ +
Sbjct:   19 LQFHDGGYPSTKEDKKKTQTHMFTNFPHTAASDDDEENILDKSELLKDEKPPPSFWTFQYYQQFFDVETYQVLNRILGSMVPRPGSNYLKTHIQPNPDLYGPFWICTTLIFTTAIAGNLANYLQSGGKEYEWRYDFHKVTFAAAAIFSYWWLVPTGLFAFLWWRGTNAGYSFLDLLSVYGYSLAIYIPISILWVVQVDWLQWILVLVGTTLSGTVLTLIFWPVFRDGNKRTAWAVVIIIFLLHASLAVGFKLYFFNAQAGTAVGVTTSAPV 289

[Close]

BLAST of Protein YIPF vs. Ensembl Cavefish
Match: yipf2 (Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124])

HSP 1 Score: 182.185 bits (461), Expect = 4.916e-55
Identity = 97/257 (37.74%), Postives = 150/257 (58.37%), Query Frame = 3

Query:   96 KLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES-----SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKPGA 848
            KL++  DE N    S+ L                  K S   W+F++YQ+ F++DT  VL R+  S +P P   ++K  I   PDLYGPFW C TL+ ++AI+GN++ +     N  +H+R  F ++++AA+A++ Y W++PL VWG   ++   E      SFLE + ++GYSL IYIPTS+LW+I   W QWLL++VA+ +SG VL++  W       K  +F+ +  + L+H LLA+G  +YFF    T++P A
Sbjct:   43 KLDLSDDEENQQESSELLGGE---------------KQSGGFWTFEYYQSFFNVDTMQVLDRIKASVMPLPGRNFVKHHIRNNPDLYGPFWICATLVFSVAISGNLSTFLSEMGNPRYHYRPHFHRVTVAAVAVFLYAWLVPLGVWGFMTWRQNAERQTSAYSFLETVCVYGYSLFIYIPTSILWIIPFGWLQWLLILVAMVISGSVLVITFWPVVRDDTKTTAFVSMAAIVLLHALLAIGCKMYFFQ---TAEPIA 281

[Close]

BLAST of Protein YIPF vs. Ensembl Cavefish
Match: yipf1 (Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35])

HSP 1 Score: 135.191 bits (339), Expect = 2.621e-37
Identity = 76/204 (37.25%), Postives = 119/204 (58.33%), Query Frame = 3

Query:  210 SPALWSFQFYQNLFDIDTRDVLR-RVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVG 800
            S   W F+    L +   R +++ R+V S +P P   +++  I   PDLYGPFW C TL+  I I+GNI+++  H     + +  +F K+++AA AIYSY W++PL +WG      SK   +   SFLE++ ++GYSL+IYIP  +LW+I     +W  +++AL LSG VL+L  W +    + +V   +   +  +H LLAVG
Sbjct:   22 SALFWLFKMNCKLNEGSLRSLVKDRIVGSVLPWPGKNFVRHYIRNNPDLYGPFWICATLVFAIGISGNISSFLVHHGQPQYKYVPEFRKVTIAATAIYSYAWLVPLALWGFLMWRNSKVSRMVSYSFLEIVCVYGYSLSIYIPAVVLWIIPSEGLRWCSIVLALCLSGSVLMLTFWPAIRDDHPRVVLAVTVTIVTLHVLLAVG 225

[Close]

BLAST of Protein YIPF vs. Ensembl Sea Lamprey
Match: yipf1 (Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35])

HSP 1 Score: 185.652 bits (470), Expect = 3.770e-57
Identity = 99/248 (39.92%), Postives = 148/248 (59.68%), Query Frame = 3

Query:  102 EIDKDEFNNDLRSQPLNANFNSSEESVADNEQI---TKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFF 818
            ++     N   + QP         ES  D+E++    K S   W+F +Y+  FD+DT  VL R+  S IP P  ++++  I   PDLYGPFW C TL+  I+I+GN++N F   +   +H+  DF K+S+AA AIYSY W++PL +WG      ++   +   SFLE++  +GYSL IYIPT++LW I     QW+L++VA+ LSG VL L  W ++   +K+++     V+ L++TLLAVG  LYFF
Sbjct:   33 DVGPPPRNQRPQQQPARVAERGGGESDDDDEELLSEEKKSAPFWTFDYYKTFFDVDTHQVLDRIKGSMIPFPGRSFVRKHIRGNPDLYGPFWICATLVFAISISGNLSNLFTQGSGSEYHYVADFRKVSIAATAIYSYAWLVPLGMWGFLLWRSNRTMGVMSFSFLEIVCAYGYSLFIYIPTAVLWTIPSGILQWILIVVAMALSGSVLALTFWPAFRDDDKRIAVATTVVIFLLNTLLAVGCKLYFF 280

[Close]

BLAST of Protein YIPF vs. Ensembl Nematostella
Match: EDO34481 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SP80])

HSP 1 Score: 68.9366 bits (167), Expect = 4.070e-13
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 3

Query:  237 YQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLA 482
            YQ   D+DT  V  R++ S +P+    +L S I   PDLYGPFW C TL+ T AIAGN+A+Y      +H W YDF K+S+ 
Sbjct:  273 YQAFLDVDTYQVGHRILGSMVPAYKRNFLISHIRPNPDLYGPFWVCATLVFTTAIAGNLASYL-VHTGDHEWVYDFHKVSVG 353

[Close]

BLAST of Protein YIPF vs. Ensembl Medaka
Match: yipf2 (protein YIPF1 [Source:NCBI gene;Acc:101155322])

HSP 1 Score: 167.933 bits (424), Expect = 8.970e-50
Identity = 85/213 (39.91%), Postives = 132/213 (61.97%), Query Frame = 3

Query:  222 WSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYF-HFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKES-----SFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKP 842
            W+F++YQ+ F++DT  VL RV  + +P P  ++LK  +   PDLYGPFW C TL+ ++AI+GN++ +     N  +H+R  F ++++AA  I+ Y W++P+ +W    ++   E      SFLE + ++GYSL IYIPTS+LW I V W QW+LV+V++ +SG VL+L  W       K ++   +  + ++HTLLAVG  LYFF       P
Sbjct:   64 WTFEYYQSFFNVDTMQVLERVRGAVMPVPGRSFLKHHVRTGPDLYGPFWICVTLVFSMAISGNVSTFLSQTGNPEYHYRPQFHRVTIAAAVIFMYAWLVPVALWAFLTWRRGAERQIGGYSFLETVCVYGYSLFIYIPTSVLWSIPVQWLQWVLVLVSMGVSGSVLVLTFWPVVRDDTKVMAAATLATILVLHTLLAVGCKLYFFQASEKGAP 276

[Close]

BLAST of Protein YIPF vs. Ensembl Medaka
Match: yipf1 (Yip1 domain family member 1 [Source:NCBI gene;Acc:101170413])

HSP 1 Score: 144.05 bits (362), Expect = 1.466e-40
Identity = 89/269 (33.09%), Postives = 153/269 (56.88%), Query Frame = 3

Query:   81 NVEYTKLEIDKDEFNNDLRSQPLNANF--NSSEESVA---DNEQI---TKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGI-----SKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKPGA 848
            N E T ++I+    + D++ Q     F  ++ +E  A   D E++    K S   W+F++YQ  FDI+T  V  R++ S +P P   +++  + K PDLYGPFW CTTL+  + I+GNI+N+         +   F K+++AA  I+SY W +PL +WG      +K   +   SF+E++ ++GYSL+ YIP  +L +  + W +W +++VA  LSG +L++  W +    + +V+  +++ + L+  +LAV   +YFF     S+PGA
Sbjct:   23 NREATTIKIE----DEDVKRQTKAPGFVHDAEDEYSAHSDDREELLSGQKKSAPFWTFEYYQKFFDIETHHVRERILGSLLPWPRKNFIQFYLRKNPDLYGPFWICTTLVFAVFISGNISNFMA-----GKYNPQFRKVTIAATMIFSYAWFVPLGLWGFLLWRNNKILNLVSYSFMEVVCVYGYSLSAYIPAVVLCIAPLEWLRWCIMVVAFGLSGSILVMTFWPALREDHPKVAMAMVSAIVLLDVVLAVVCKMYFF-----SRPGA 277

[Close]

BLAST of Protein YIPF vs. Planmine SMEST
Match: SMESG000025076.1 (SMESG000025076.1)

HSP 1 Score: 531.561 bits (1368), Expect = 0.000e+0
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 3

Query:   69 MSFKNVEYTKLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCXXXXXXXXXXGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKPGANSSSSLHRPM 878
            MSFKNVEYTKLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCTTLILTIAIAGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKPGANSSSSLHRPM
Sbjct:    1 MSFKNVEYTKLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITKSSPALWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFWTCTTLILTIAIAGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMPLFVWGISKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLVIVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFFHVPATSKPGANSSSSLHRPM 270

The following BLAST results are available for this feature:

BLAST of Protein YIPF vs. Ensembl Human
BLAST of Protein YIPF vs. Ensembl Celegans
BLAST of Protein YIPF vs. Ensembl Fly
BLAST of Protein YIPF vs. Ensembl Zebrafish
BLAST of Protein YIPF vs. Ensembl Xenopus
BLAST of Protein YIPF vs. Ensembl Mouse
BLAST of Protein YIPF vs. UniProt/SwissProt
BLAST of Protein YIPF vs. TrEMBL
BLAST of Protein YIPF vs. Ensembl Cavefish
BLAST of Protein YIPF vs. Ensembl Sea Lamprey
BLAST of Protein YIPF vs. Ensembl Yeast
BLAST of Protein YIPF vs. Ensembl Nematostella
BLAST of Protein YIPF vs. Ensembl Medaka
BLAST of Protein YIPF vs. Planmine SMEST

BLAST of Protein YIPF vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
YIPF1	3.213e-53	37.12	Yip1 domain family member 1 [Source:HGNC Symbol;Ac...	[more]
YIPF1	3.213e-53	37.12	Yip1 domain family member 1 [Source:HGNC Symbol;Ac...	[more]
YIPF2	1.289e-37	38.86	Yip1 domain family member 2 [Source:HGNC Symbol;Ac...	[more]
YIPF2	1.289e-37	38.86	Yip1 domain family member 2 [Source:HGNC Symbol;Ac...	[more]
YIPF2	2.501e-27	38.46	Yip1 domain family member 2 [Source:HGNC Symbol;Ac...	[more]

BLAST of Protein YIPF vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Y25C1A.7	6.555e-37	34.20	pep chromosome:WBcel235:II:3065219:3071080:-1 gene...	[more]
Y25C1A.7	6.555e-37	34.20	pep chromosome:WBcel235:II:3065219:3071381:-1 gene...	[more]
Y25C1A.7	6.555e-37	34.20	pep chromosome:WBcel235:II:3064929:3071062:-1 gene...	[more]
Y25C1A.7	7.246e-37	34.20	pep chromosome:WBcel235:II:3064929:3070942:-1 gene...	[more]
Y25C1A.7	6.387e-36	35.00	pep chromosome:WBcel235:II:3062542:3071080:-1 gene...	[more]

BLAST of Protein YIPF vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3


Match Name	E-value	Identity	Description
CG4645	2.825e-44	42.86	gene:FBgn0030435 transcript:FBtr0343649	[more]
CG4645	2.825e-44	42.86	gene:FBgn0030435 transcript:FBtr0073692	[more]
CG4645	2.825e-44	42.86	gene:FBgn0030435 transcript:FBtr0346316	[more]

BLAST of Protein YIPF vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
yipf2	1.505e-55	36.03	Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-...	[more]
yipf1	6.263e-48	33.82	Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-...	[more]
yipf1	1.121e-46	34.40	Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-...	[more]
yipf1	1.308e-25	37.18	Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-...	[more]
yipf2	3.773e-24	34.69	Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-...	[more]

BLAST of Protein YIPF vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3


Match Name	E-value	Identity	Description
rab33b	4.208e-55	39.36	RAB33B, member RAS oncogene family [Source:Xenbase...	[more]
ddit3	1.161e-50	40.65	DNA damage inducible transcript 3 [Source:Xenbase;...	[more]
ddit3	3.098e-50	40.65	DNA damage inducible transcript 3 [Source:Xenbase;...	[more]

BLAST of Protein YIPF vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Yipf1	1.303e-54	39.66	Yip1 domain family, member 1 [Source:MGI Symbol;Ac...	[more]
Yipf1	8.305e-47	36.40	Yip1 domain family, member 1 [Source:MGI Symbol;Ac...	[more]
Yipf2	4.599e-41	35.06	Yip1 domain family, member 2 [Source:MGI Symbol;Ac...	[more]
Yipf2	4.599e-41	35.06	Yip1 domain family, member 2 [Source:MGI Symbol;Ac...	[more]
Yipf2	4.599e-41	35.06	Yip1 domain family, member 2 [Source:MGI Symbol;Ac...	[more]

BLAST of Protein YIPF vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q91VU1\|YIPF1_MOUSE	9.112e-54	39.66	Protein YIPF1 OS=Mus musculus OX=10090 GN=Yipf1 PE...	[more]
sp\|Q6P6G5\|YIPF1_RAT	1.752e-53	38.46	Protein YIPF1 OS=Rattus norvegicus OX=10116 GN=Yip...	[more]
sp\|Q9Y548\|YIPF1_HUMAN	1.543e-52	37.12	Protein YIPF1 OS=Homo sapiens OX=9606 GN=YIPF1 PE=...	[more]
sp\|Q5RBL0\|YIPF1_PONAB	1.932e-52	37.12	Protein YIPF1 OS=Pongo abelii OX=9601 GN=YIPF1 PE=...	[more]
sp\|Q99LP8\|YIPF2_MOUSE	3.217e-40	35.06	Protein YIPF2 OS=Mus musculus OX=10090 GN=Yipf2 PE...	[more]

BLAST of Protein YIPF vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0B7BA63	2.424e-69	42.66	Protein YIPF (Fragment) OS=Arion vulgaris OX=10286...	[more]
R7TLQ3	3.819e-68	42.32	Yip1 domain-containing protein OS=Capitella teleta...	[more]
A0A1S3JVS9	4.813e-68	45.28	Protein YIPF OS=Lingula unguis OX=7574 GN=LOC10617...	[more]
A0A0L8FHV6	7.083e-68	43.12	Protein YIPF OS=Octopus bimaculoides OX=37653 GN=O...	[more]
A0A210QJG4	2.184e-67	42.80	Protein YIPF OS=Mizuhopecten yessoensis OX=6573 GN...	[more]

BLAST of Protein YIPF vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
yipf2	4.916e-55	37.74	Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-...	[more]
yipf1	2.621e-37	37.25	Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-...	[more]

BLAST of Protein YIPF vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
yipf1	3.770e-57	39.92	Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-...	[more]

BLAST of Protein YIPF vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Protein YIPF vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO34481	4.070e-13	46.34	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Protein YIPF vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2


Match Name	E-value	Identity	Description
yipf2	8.970e-50	39.91	protein YIPF1 [Source:NCBI gene;Acc:101155322]	[more]
yipf1	1.466e-40	33.09	Yip1 domain family member 1 [Source:NCBI gene;Acc:...	[more]

BLAST of Protein YIPF vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1


Match Name	E-value	Identity	Description
SMESG000025076.1	0.000e+0	100.00	SMESG000025076.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30000858 ID=SMED30000858|Name=Protein YIPF|organism=Schmidtea mediterranea sexual|type=transcript|length=953bp
CTTAGTGGCAACATTTATTTATAATTTATTACATATTTTACATTAATTAA
TAAAATTCAGTCGCTAAGATGTCTTTTAAAAATGTTGAGTATACAAAATT
GGAAATTGACAAAGATGAATTTAATAATGATTTGCGATCACAACCTTTAA
ATGCAAATTTTAATAGTTCAGAAGAAAGTGTTGCAGACAATGAACAAATT
ACTAAATCTTCCCCAGCATTGTGGAGTTTTCAATTTTATCAAAATCTTTT
TGATATAGACACCAGAGATGTGTTAAGGCGAGTTGTATATTCTTTCATTC
CAAGCCCCAATGGTACATATTTGAAATCAATCATAAATAAAAAGCCTGAT
TTATACGGACCGTTTTGGACATGCACAACTCTTATTTTGACAATTGCTAT
CGCTGGAAACATTGCAAATTATTTCCATTTCGCTAATCGGAATCATCATT
GGCGATACGACTTCGGGAAATTGTCCCTGGCGGCCATCGCCATCTACAGC
TATTGGTGGATCATGCCGCTGTTCGTCTGGGGGATCTCCAAATTCAAGAT
GATCAAAGAATCCTCATTCCTGGAATTGCTGACTCTGTTTGGATATTCAC
TGGCAATATATATTCCAACATCTATGCTGTGGGTGATCCAGGTCAGTTGG
TTCCAATGGCTCCTTGTTATTGTTGCGTTGACTCTGTCGGGGCTAGTGCT
GATACTGGCTATGTGGTCAAGCTATGGCACAGCTAATAAGCAGGTCAGTT
TCCTCATCATCACGGTAGTCGCCCTCATGCACACTCTGCTCGCGGTTGGG
TTTATGCTTTATTTCTTTCATGTTCCTGCCACCAGCAAGCCCGGTGCCAA
TTCATCAAGTAGTCTCCATCGGCCGATGTGATCAGATCTTTATTATATTG
AGTGATTTGATCTATTTGTGATAGCAATAAATTGTTTTCTAAATGAAAAA
AAA

protein sequence of SMED30000858-orf-1

>SMED30000858-orf-1 ID=SMED30000858-orf-1|Name=SMED30000858-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=271bp
MSFKNVEYTKLEIDKDEFNNDLRSQPLNANFNSSEESVADNEQITKSSPA
LWSFQFYQNLFDIDTRDVLRRVVYSFIPSPNGTYLKSIINKKPDLYGPFW
TCTTLILTIAIAGNIANYFHFANRNHHWRYDFGKLSLAAIAIYSYWWIMP
LFVWGISKFKMIKESSFLELLTLFGYSLAIYIPTSMLWVIQVSWFQWLLV
IVALTLSGLVLILAMWSSYGTANKQVSFLIITVVALMHTLLAVGFMLYFF
HVPATSKPGANSSSSLHRPM*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **cellular component**
Term	Definition
GO:0005794	Golgi apparatus
GO:0016020	membrane
GO:0016021	integral component of membrane

Vocabulary: **biological process**
Term	Definition
GO:0016192	vesicle-mediated transport

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000101	muscle cell
PLANA:0000142	posterior region of the whole animal

Vocabulary: **INTERPRO**
Term	Definition
IPR039765	Yip5/YIPF1/YIPF2
IPR006977	Yip1

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006977	Yip1 domain	PFAM	PF04893	Yip1	coord: 62..220 e-value: 1.9E-13 score: 50.5
IPR039765	Protein Yip5/YIPF1/YIPF2	PANTHER	PTHR12822	UNCHARACTERIZED	coord: 12..250
None	No IPR available	TMHMM	TMhelix		coord: 226..248
None	No IPR available	TMHMM	TMhelix		coord: 170..192
None	No IPR available	TMHMM	TMhelix		coord: 98..120
None	No IPR available	TMHMM	TMhelix		coord: 197..219
None	No IPR available	TMHMM	TMhelix		coord: 135..157

Main menu

Protein YIPF

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Owlery

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