Dynactin subunit 4

Overview
NameDynactin subunit 4
Smed IDSMED30000765
Length (bp)1727
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Dynactin subunit 4 (SMED30000765) t-SNE clustered cells

Violin plots show distribution of expression levels for Dynactin subunit 4 (SMED30000765) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Dynactin subunit 4 (SMED30000765) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Dynactin subunit 4 (SMED30000765) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30000765

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
Smed sexual biotypeSMED30000765 Contig41672newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30000765 Contig41672uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
neuronSMED30000765 Contig41672newmark_estsPMID:27612384
Roberts-Galbraith et al., 2016		whole organism asexual adult colorimetric in situ hybridization evidence
neuronSMED30000765 Contig41672uc_Smed_v2PMID:27612384
Roberts-Galbraith et al., 2016		whole organism asexual adult colorimetric in situ hybridization evidence
parenchymaSMED30000765 Contig41672newmark_estsPMID:27612384
Roberts-Galbraith et al., 2016		whole organism asexual adult colorimetric in situ hybridization evidence
parenchymaSMED30000765 Contig41672uc_Smed_v2PMID:27612384
Roberts-Galbraith et al., 2016		whole organism asexual adult colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Human
Match: DCTN4 (dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15518])

HSP 1 Score: 289.656 bits (740), Expect = 2.995e-91
Identity = 169/476 (35.50%), Postives = 260/476 (54.62%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIR--DYTDKISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++  +  V  L Q E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L         G+ + R R     ST   L+ +  E +K  I+I   +A + +  + E  + +   + EV  ++QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V        D  D  STAK+V+PP EL L  K+    +DE   +    D +DD         +I++ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L  G +
Sbjct:    1 MASLLQSDRVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSDKYG-LGTRLQRPRAGASISTLAGLSLKEGEDQK-EIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDFQPVCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLFECEEGDPDDINSTAKVVVPPKELVLAGKDAAAEYDE---LAEPQDFQDD--------PDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPL 458
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Human
Match: DCTN4 (dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15518])

HSP 1 Score: 289.271 bits (739), Expect = 4.993e-91
Identity = 169/482 (35.06%), Postives = 261/482 (54.15%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLL----NKSIVNDSGSAVNRRR------YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIR--DYTDKISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++  +  V  L Q E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L        +V+  G     +R       ST   L+ +  E +K  I+I   +A + +  + E  + +   + EV  ++QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V        D  D  STAK+V+PP EL L  K+    +DE   +    D +DD         +I++ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L  G +
Sbjct:    1 MASLLQSDRVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSQHTIHVVDKYGLGTRLQRPRAGASISTLAGLSLKEGEDQK-EIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDFQPVCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLFECEEGDPDDINSTAKVVVPPKELVLAGKDAAAEYDE---LAEPQDFQDD--------PDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPL 465
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Human
Match: DCTN4 (dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15518])

HSP 1 Score: 233.417 bits (594), Expect = 2.163e-70
Identity = 144/419 (34.37%), Postives = 223/419 (53.22%), Query Frame = 3 
Query:  282 MASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIR--DYTDKISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L         G+ + R R     ST   L+ +  E +K  I+I   +A + +  + E  + +   + EV  ++QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V        D  D  STAK+V+PP EL L  K+    +DE   +    D +DD         +I++ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L  G +
Sbjct:    1 MPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSDKYG-LGTRLQRPRAGASISTLAGLSLKEGEDQK-EIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDFQPVCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLFECEEGDPDDINSTAKVVVPPKELVLAGKDAAAEYDE---LAEPQDFQDD--------PDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPL 401
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Human
Match: DCTN4 (dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15518])

HSP 1 Score: 105.531 bits (262), Expect = 3.267e-26
Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 3 
Query:  282 MASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFL 644
            M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L
Sbjct:    1 MPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPL 119
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Human
Match: DCTN4 (dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15518])

HSP 1 Score: 99.3673 bits (246), Expect = 2.366e-24
Identity = 48/116 (41.38%), Postives = 72/116 (62.07%), Query Frame = 3 
Query:  282 MASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRK 629
            M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+
Sbjct:    1 MPSAEAKLKKNRCANCFDCPGCMHTLSTRATSI--STQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRR 114
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Celegans
Match: dnc-4 (DyNactin Complex component [Source:UniProtKB/TrEMBL;Acc:Q18194])

HSP 1 Score: 119.783 bits (299), Expect = 4.775e-29
Identity = 87/349 (24.93%), Postives = 158/349 (45.27%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYLPLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNY--FFLLNKSIVNDSGSAVNRRRYSTQMRLN--KRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRI-KPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSP 1148
            M+ +     ++  C C ++  L    FCRYC++I+C +C   EVD  +CP CLE  +  EA  +K KC +C DCP C N+LS R                       Y+ C YCRW++RE++  D++ +T  WP  ENP   Q+  +     +    E   K+  K  S K +  F L +K         V++R+ +    +N    H+  E   +E   +E  +++  +D+       I++ + NI              E   P+   +  +  +RC +C+  L K +    + +FKI+  +   VP++R+ +P+   +  +  +  +V +++TN +     +  +P
Sbjct:    1 MSELLQYSRIKYECTCGKFRTLPDLVFCRYCFKIKCDDCSLGEVDNIFCPRCLEPSSVPEARLKKHKCASCNDCPKCANVLSART-----------------ENDNVYLVCQYCRWSSREANQEDQE-NTKSWPTKENPLVNQLGEVTAYMKRLELIENAPKDLKKGKSGKAWTAFHLKDKFGFQ---QMVDKRKKALAPEMNPVDAHAPTEAPTLEDEIKERTDDLRTLDQ------IIMQPLINIS-------------EPLLPVQVPLAGRVQVRCDECERTLIKRDFGVTTFKFKISSFARQFVPDIRMSRPV---DDLKVGETSHVFLSITNLSSSAMDLTIAP 306
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Fly
Match: DCTN4-p62 (gene:FBgn0033206 transcript:FBtr0088944)

HSP 1 Score: 181.03 bits (458), Expect = 5.899e-50
Identity = 118/364 (32.42%), Postives = 185/364 (50.82%), Query Frame = 3 
Query:  144 VQILCQCERYLPLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVI---------REPX-------------XXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEK-ERNKYASRKNYFFLLNKSIVNDSGSAVNRRRYSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKF---SPIRD 1157
            V+  C C    P+   +FCR+C ++RC  C+THE++ ++C  CLE + S EA  +K+ C NCFDCP C + LS RA+ +         +EPK               SK       +K+YY++C  CRWTTR+  IPD+  +T  WP  E  +  +  AL+E F     +EK EK E  +  + K + F    S+ + +G  V+  R   Q+  N +  + + V   I   EA   +  + E+IF +   +  V  I QR   P  QP +V +  P  + + +KRS+RCR+C+HNL KPE    SI+++I   + YHVPE+ +  +   +     K   +++ +TNP     T++    SP  D
Sbjct:    9 VKYACSCGILNPINTLFFCRHCPKLRCGFCVTHEIESHFCSNCLENIPSTEARHKKNCCANCFDCPCCQHTLSARASTVPVVRKSEEAKEPKDGDSKGEATPPVPASSKPSAVPTTKKMYYLSCLSCRWTTRDVGIPDQGVATGTWPDNECLYQARFNALVEYFQAVVLQEKQEKLEFMRRKAPKQHKF---PSLTDRTGLTVSLIRR--QIGWNDKAPKAKAV---ITPAEATAEVEGLPENIFTEPLNLRNVTTITQRHSQPADQPTAVGSLYPQRRSLWIKRSLRCRQCEHNLIKPEYHPTSIKYRIQHFASYHVPEVVM--VRCEQPLVAGKSNAILLKLTNPTIYDMTIRLLTASPPED 362
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Zebrafish
Match: dctn4 (dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306])

HSP 1 Score: 278.485 bits (711), Expect = 4.621e-87
Identity = 164/478 (34.31%), Postives = 260/478 (54.39%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPI--RDYTDKISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEISN 1526
            M T+   + V  L + E+ +  PL + YFCRYC ++R   C++HEVD ++CP+CLE M S EA  +K++C NCFDCP C + LS RA  I  P     D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH ++I  LIE + + A +EKLE++R K A R+  F     S     G+ + R+R     S    L+ +  E +K  I I   +A + +  + E  + +   + EV  + QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +         K   V++T+TNP   +T V        D  D  STAK+++P  EL L  K+    +DE+    +E  G  D       + ++V+ RK+NK+ FF  VIP + +G +    ++  D++++ + +  TE    + +    T   +L  G ++ 
Sbjct:    1 MATLLQPEKVLYLVRGEKKIRVPLSQLYFCRYCSELRSLECVSHEVDSHFCPSCLENMPSAEAKLKKNRCANCFDCPCCMHTLSTRATNI--PAPLPDDPTKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRINKLIEYYQQLAQREKLERDRKKMARRRP-FMPQAFSEKYGLGTRLQRQRSGAPISALYGLSLKEGEDQK-EITIEPAQALDEVEPLPEDYYTRPVNLPEVTTLRQRLLQPDFQPAGASQLHPRHKHLLMKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVSYIPEVRIMSIP---NLRHMKESQVLLTLTNPVENITHVSLYTCEEEDQDDINSTAKVLVPSKELVLAGKDAAAEYDEL----AEPQGFQD-------DPDVVAFRKSNKIGFFIKVIPQQEEGDVTVAFKLRHDFRNLAAPIRPTEEGETTAEAIWLTHHVELSLGPLAT 460
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Zebrafish
Match: dctn4 (dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306])

HSP 1 Score: 277.715 bits (709), Expect = 1.011e-86
Identity = 163/484 (33.68%), Postives = 259/484 (53.51%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNY----FFLLNKSIVNDSGSAVNRRR------YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPI--RDYTDKISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEISN 1526
            M T+   + V  L + E+ +  PL + YFCRYC ++R   C++HEVD ++CP+CLE M S EA  +K++C NCFDCP C + LS RA  I  P     D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH ++I  LIE + + A +EKLE++R K A R+ +    F      +V   G     +R       S    L+ +  E +K  I I   +A + +  + E  + +   + EV  + QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +         K   V++T+TNP   +T V        D  D  STAK+++P  EL L  K+    +DE+    +E  G  D       + ++V+ RK+NK+ FF  VIP + +G +    ++  D++++ + +  TE    + +    T   +L  G ++ 
Sbjct:    1 MATLLQPEKVLYLVRGEKKIRVPLSQLYFCRYCSELRSLECVSHEVDSHFCPSCLENMPSAEAKLKKNRCANCFDCPCCMHTLSTRATNI--PAPLPDDPTKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRINKLIEYYQQLAQREKLERDRKKMARRRPFMPQAFSQHTIHVVEKYGLGTRLQRQRSGAPISALYGLSLKEGEDQK-EITIEPAQALDEVEPLPEDYYTRPVNLPEVTTLRQRLLQPDFQPAGASQLHPRHKHLLMKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVSYIPEVRIMSIP---NLRHMKESQVLLTLTNPVENITHVSLYTCEEEDQDDINSTAKVLVPSKELVLAGKDAAAEYDEL----AEPQGFQD-------DPDVVAFRKSNKIGFFIKVIPQQEEGDVTVAFKLRHDFRNLAAPIRPTEEGETTAEAIWLTHHVELSLGPLAT 467
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Zebrafish
Match: dctn4 (dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306])

HSP 1 Score: 155.606 bits (392), Expect = 2.959e-43
Identity = 74/176 (42.05%), Postives = 111/176 (63.07%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYF 638
            M T+   + V  L + E+ +  PL + YFCRYC ++R   C++HEVD ++CP+CLE M S EA  +K++C NCFDCP C + LS RA  I  P     D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH ++I  LIE + + A +EKLE++R K A R+ + 
Sbjct:    1 MATLLQPEKVLYLVRGEKKIRVPLSQLYFCRYCSELRSLECVSHEVDSHFCPSCLENMPSAEAKLKKNRCANCFDCPCCMHTLSTRATNI--PAPLPDDPTKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRINKLIEYYQQLAQREKLERDRKKMARRRPFM 174
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Xenopus
Match: dctn4 (dynactin subunit 4 [Source:NCBI gene;Acc:595065])

HSP 1 Score: 286.574 bits (732), Expect = 5.434e-90
Identity = 168/479 (35.07%), Postives = 268/479 (55.95%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFL-LNKSIVN--DSGSAVNRRRYSTQMR----LNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIRDY-TDKI-STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++   + V  L   E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I  P     D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH ++I  L+E + + A KEK+E++R K   R+NY  L  + SI++    G+ + R+R    +     L  +  E +K  I+I   +A E +  + E  + +   + EV  ++QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ +VPE+RI  +       + K   V++T+TNP   +T V   P  +   D+I STAK+++P  EL L  K+    +DE   +    D +DD         ++V+ RKANK+  F  V P++ KG +I   ++  D++++ + +   E   +S++    T   +L  G +
Sbjct:    1 MASLLQLERVLYLVHGEKPIRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPCCMHTLSTRATNI--PAPLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRINKLLEYYQQLAQKEKIERDRKKLVRRRNYMPLAFSVSILDKYGRGTRLQRQRPGAPITALTGLTLKEGEDQK-EIKIEAAQAIEEVEPLPEDYYTRPINLTEVTTLDQRLLQPDFQPICASQLHPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVALSYVPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVNLLPCEEGDQDEINSTAKVIVPNKELILAGKDAAAEYDE---LAEPQDFQDD--------PDVVAFRKANKVGVFIKVSPLQEKGKVIVSFKLKHDFRNLAAPIRPLEDNESSSEAVWLTHHVELDLGPV 462
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Xenopus
Match: dctn4 (dynactin subunit 4 [Source:NCBI gene;Acc:595065])

HSP 1 Score: 283.493 bits (724), Expect = 8.410e-89
Identity = 168/482 (34.85%), Postives = 266/482 (55.19%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYF---FLLNKSIVNDS---GSAVNRRRYSTQMR----LNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIRDY-TDKI-STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++   + V  L   E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I  P     D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH ++I  L+E + + A KEK+E++R K   R+NY    F  +   V D    G+ + R+R    +     L  +  E +K  I+I   +A E +  + E  + +   + EV  ++QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ +VPE+RI  +       + K   V++T+TNP   +T V   P  +   D+I STAK+++P  EL L  K+    +DE   +    D +DD         ++V+ RKANK+  F  V P++ KG +I   ++  D++++ + +   E   +S++    T   +L  G +
Sbjct:    1 MASLLQLERVLYLVHGEKPIRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPCCMHTLSTRATNI--PAPLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRINKLLEYYQQLAQKEKIERDRKKLVRRRNYMPLAFSQHTIHVADKYGRGTRLQRQRPGAPITALTGLTLKEGEDQK-EIKIEAAQAIEEVEPLPEDYYTRPINLTEVTTLDQRLLQPDFQPICASQLHPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVALSYVPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVNLLPCEEGDQDEINSTAKVIVPNKELILAGKDAAAEYDE---LAEPQDFQDD--------PDVVAFRKANKVGVFIKVSPLQEKGKVIVSFKLKHDFRNLAAPIRPLEDNESSSEAVWLTHHVELDLGPV 465
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Xenopus
Match: dctn4 (dynactin subunit 4 [Source:NCBI gene;Acc:595065])

HSP 1 Score: 259.61 bits (662), Expect = 1.285e-79
Identity = 165/479 (34.45%), Postives = 261/479 (54.49%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFL-LNKSIVN--DSGSAVNRRRYSTQMR----LNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIRDY-TDKI-STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++   + V  L   E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I  P     D  K  ++K YY+AC +CRWT+R+  + D K+   C    +      I  L+E + + A KEK+E++R K   R+NY  L  + SI++    G+ + R+R    +     L  +  E +K  I+I   +A E +  + E  + +   + EV  ++QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ +VPE+RI  +       + K   V++T+TNP   +T V   P  +   D+I STAK+++P  EL L  K+    +DE   +    D +DD         ++V+ RKANK+  F  V P++ KG +I   ++  D++++ + +   E   +S++    T   +L  G +
Sbjct:    1 MASLLQLERVLYLVHGEKPIRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPCCMHTLSTRATNI--PAPLPDDPAKTTMKKAYYLACGFCRWTSRDVGMAD-KSVGECL--IDRNFLLIINKLLEYYQQLAQKEKIERDRKKLVRRRNYMPLAFSVSILDKYGRGTRLQRQRPGAPITALTGLTLKEGEDQK-EIKIEAAQAIEEVEPLPEDYYTRPINLTEVTTLDQRLLQPDFQPICASQLHPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVALSYVPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVNLLPCEEGDQDEINSTAKVIVPNKELILAGKDAAAEYDE---LAEPQDFQDD--------PDVVAFRKANKVGVFIKVSPLQEKGKVIVSFKLKHDFRNLAAPIRPLEDNESSSEAVWLTHHVELDLGPV 459
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Mouse
Match: Dctn4 (dynactin 4 [Source:MGI Symbol;Acc:MGI:1914915])

HSP 1 Score: 293.893 bits (751), Expect = 5.164e-93
Identity = 173/476 (36.34%), Postives = 264/476 (55.46%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIRDY-TDKI-STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++  ++ V  L Q E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L   S     G+ + R R     ST   L+ R  E +K  ++I   +A   +  + E  + +   + EV  ++QRL  P+ QP S     P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V      +   D I STAK+V+PP EL L  K+    +DE   +    D +DD         +IV+ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L FG +
Sbjct:    1 MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAF-SDKYSLGTRLQRPRAGASISTLAGLSLREGEDQK-EVKIEPAQAVAEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDLQPVSASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLLECDEGDPDNINSTAKVVVPPKELILAGKDAAAEYDE---LAEPQDFQDD--------PDIVAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPVEEGDQGTEVIWLTQHVELSFGPL 458
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Mouse
Match: Dctn4 (dynactin 4 [Source:MGI Symbol;Acc:MGI:1914915])

HSP 1 Score: 293.123 bits (749), Expect = 1.394e-92
Identity = 172/482 (35.68%), Postives = 267/482 (55.39%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFL-LNKSIVN-----DSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIRDY-TDKI-STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++  ++ V  L Q E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L  ++  ++       G+ + R R     ST   L+ R  E +K  ++I   +A   +  + E  + +   + EV  ++QRL  P+ QP S     P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V      +   D I STAK+V+PP EL L  K+    +DE   +    D +DD         +IV+ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L FG +
Sbjct:    1 MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSQHTIHVVDKYSLGTRLQRPRAGASISTLAGLSLREGEDQK-EVKIEPAQAVAEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDLQPVSASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLLECDEGDPDNINSTAKVVVPPKELILAGKDAAAEYDE---LAEPQDFQDD--------PDIVAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPVEEGDQGTEVIWLTQHVELSFGPL 465
[Close]
BLAST of Dynactin subunit 4 vs. UniProt/SwissProt
Match: sp|Q8CBY8|DCTN4_MOUSE (Dynactin subunit 4 OS=Mus musculus OX=10090 GN=Dctn4 PE=1 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 9.753e-92
Identity = 172/482 (35.68%), Postives = 267/482 (55.39%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFL-LNKSIVN-----DSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIRDY-TDKI-STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++  ++ V  L Q E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L  ++  ++       G+ + R R     ST   L+ R  E +K  ++I   +A   +  + E  + +   + EV  ++QRL  P+ QP S     P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V      +   D I STAK+V+PP EL L  K+    +DE   +    D +DD         +IV+ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L FG +
Sbjct:    1 MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSQHTIHVVDKYSLGTRLQRPRAGASISTLAGLSLREGEDQK-EVKIEPAQAVAEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDLQPVSASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLLECDEGDPDNINSTAKVVVPPKELILAGKDAAAEYDE---LAEPQDFQDD--------PDIVAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPVEEGDQGTEVIWLTQHVELSFGPL 465
[Close]
BLAST of Dynactin subunit 4 vs. UniProt/SwissProt
Match: sp|Q9QUR2|DCTN4_RAT (Dynactin subunit 4 OS=Rattus norvegicus OX=10116 GN=Dctn4 PE=1 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 9.858e-92
Identity = 172/482 (35.68%), Postives = 267/482 (55.39%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFL-LNKSIVN-----DSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIRDY-TDKI-STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++  ++ V  L Q E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L  ++  ++       G+ + R R     ST   L+ R  E +K  ++I   +A   +  + E  + +   + EV  ++QRL  P+ QP S     P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V      +   D I STAK+V+PP EL L  K+    +DE   +    D +DD         +IV+ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L FG +
Sbjct:    1 MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHAQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSQHTIHVVDKYSLGTRLQRPRAGASISTLAGLSLREGEDQK-EVKIEPAQAVAEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDLQPVSASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLLECEEGDPDNINSTAKVVVPPKELILAGKDAAAEYDE---LAEPQDFQDD--------PDIVAFRKANKVGIFIKVTPQREEGDVTVCFKMKHDFKNLAAPIRPMEESDQGTEVIWLTQHVELSFGPL 465
[Close]
BLAST of Dynactin subunit 4 vs. UniProt/SwissProt
Match: sp|Q9UJW0|DCTN4_HUMAN (Dynactin subunit 4 OS=Homo sapiens OX=9606 GN=DCTN4 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.438e-90
Identity = 169/476 (35.50%), Postives = 260/476 (54.62%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIR--DYTDKISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++  +  V  L Q E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L         G+ + R R     ST   L+ +  E +K  I+I   +A + +  + E  + +   + EV  ++QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V        D  D  STAK+V+PP EL L  K+    +DE   +    D +DD         +I++ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L  G +
Sbjct:    1 MASLLQSDRVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSDKYG-LGTRLQRPRAGASISTLAGLSLKEGEDQK-EIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDFQPVCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLFECEEGDPDDINSTAKVVVPPKELVLAGKDAAAEYDE---LAEPQDFQDD--------PDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPL 458
[Close]
BLAST of Dynactin subunit 4 vs. UniProt/SwissProt
Match: sp|Q5R7U7|DCTN4_PONAB (Dynactin subunit 4 OS=Pongo abelii OX=9601 GN=DCTN4 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 4.661e-89
Identity = 168/476 (35.29%), Postives = 260/476 (54.62%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIR--DYTDKISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++  +  V  L Q E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L   S     G+ + R R     ST   L+ +  E +K  I+I   +A + +  + E  + +   + EV  ++QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI   ++ ++PE+RI  +       + K   V++T+TNP   +T V        D  +  STAK+V+PP EL L  K+    +DE   +    D +DD         +I++ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L  G +
Sbjct:    1 MASLLQSDRVVYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAF-SDKYGLGTRLQRPRAGASISTLAGLSLKEGEDQK-EIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDFQPVCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQQVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLLECEEGDPDNTNSTAKVVVPPKELVLAGKDAAAEYDE---LAEPQDFQDD--------PDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPL 458
[Close]
BLAST of Dynactin subunit 4 vs. TrEMBL
Match: A0A0X3P5G0 (Dynactin subunit 4 (Fragment) OS=Schistocephalus solidus OX=70667 GN=DCTN4 PE=4 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 6.040e-93
Identity = 183/527 (34.72%), Postives = 273/527 (51.80%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYLPLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXX---XXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRRYSTQMRLNKRHSEVEKVAIEIPKQEAKE--NIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRI-----------------------------KPLSKS---------------------EKFEFNKPQNVIITVTNPAHRVTTVKFSPI--RDYTDKI--------------------STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKS--------KGPIICCIQMSFDYKDVTSFL 1442
            M T FD + VQ+LC C R  PL + YFCR+CY +RC NC++HEVD +YCP CLE MAS EA  R+ +C NCFDCPSCG+ LS RA ++  P  +        K   QKVYY+ C++CRW+TR+S I D+ T    W +  NPH +++E L+ ++ + A KEK E+ER+KY  ++NY  L+ K  V    +   RR  S+      R +E   V I IP  +A+      ++D+   +K   IE V ++ QR   P+ QP SV    P  K + VKRS+RCR+C+HNLSK + + ++I+F+INL +  HVP+LRI                             +PL                        + F   K  NV++T++NPAHRVTTV+   +   +  DK+                    STA+L LP   ++L AK+++  +D++   T+  +  DD  K       +++ R+ NK+     V P  +        + P+   IQM+FDY++ TS +
Sbjct:   25 MATYFDLRRVQLLCSCNRICPLSQLYFCRHCYDVRCGNCVSHEVDSHYCPNCLENMASAEAKMRRHRCGNCFDCPSCGHNLSTRATIVLVPSAEGSAAKDLSKSTPQKVYYLTCNFCRWSTRDSGIADQATPAGGWQESPNPHEQRVEELVAAYRQLAVKEKNERERSKYVRKRNYMLLMEKYPVL---TPRFRRCRSSAFGSFGRDTE-PAVEISIPGVQAESITEGFNVDD-FVKKPLKIETVTSVFQRYMSPKSQPTSVSQLEPRHKALAVKRSLRCRQCEHNLSKADFNPSAIKFRINLSAFQHVPDLRICLPAQCIASACSGNVIAAQLPSATAYDPSRPLPLGLPNRTLPVLSFASVPAASITLQGFAMGKTTNVVLTLSNPAHRVTTVRLCQLSTEEEADKLAVCLSGSPGLTEVCAGATIYSTARLTLPSESIRLAAKSDVTEYDDLATTTTSNEFSDDDPK-------VIAFRQGNKVGVHVGVTPAPAGSDKTVFERQPVRALIQMTFDYQNTTSSM 539
[Close]
BLAST of Dynactin subunit 4 vs. TrEMBL
Match: A0A0X3P715 (Dynactin subunit 4 (Fragment) OS=Schistocephalus solidus OX=70667 GN=DCTN4 PE=4 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.768e-92
Identity = 182/533 (34.15%), Postives = 270/533 (50.66%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYLPLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXX---XXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRRYSTQMRLNKRHSEVE------KVAIEIPKQEAKE--NIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRI-----------------------------KPLSKS---------------------EKFEFNKPQNVIITVTNPAHRVTTVKFSPI--RDYTDKI--------------------STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKS--------KGPIICCIQMSFDYKDVTSFL 1442
            M T FD + VQ+LC C R  PL + YFCR+CY +RC NC++HEVD +YCP CLE MAS EA  R+ +C NCFDCPSCG+ LS RA ++  P  +        K   QKVYY+ C++CRW+TR+S I D+ T    W +  NPH +++E L+ ++ + A KEK E+ER+KY  ++NY  L+ K  V        R R S        H +         V I IP  +A+      ++D+   +K   IE V ++ QR   P+ QP SV    P  K + VKRS+RCR+C+HNLSK + + ++I+F+INL +  HVP+LRI                             +PL                        + F   K  NV++T++NPAHRVTTV+   +   +  DK+                    STA+L LP   ++L AK+++  +D++   T+  +  DD  K       +++ R+ NK+     V P  +        + P+   IQM+FDY++ TS +
Sbjct:   25 MATYFDLRRVQLLCSCNRICPLSQLYFCRHCYDVRCGNCVSHEVDSHYCPNCLENMASAEAKMRRHRCGNCFDCPSCGHNLSTRATIVLVPSAEGSAAKDLSKSTPQKVYYLTCNFCRWSTRDSGIADQATPAGGWQESPNPHEQRVEELVAAYRQLAVKEKNERERSKYVRKRNYMLLMEKYPVLT--PRFRRCRSSAFGSFGAIHDQSAPRDTEPAVEISIPGVQAESITEGFNVDD-FVKKPLKIETVTSVFQRYMSPKSQPTSVSQLEPRHKALAVKRSLRCRQCEHNLSKADFNPSAIKFRINLSAFQHVPDLRICLPAQCIASACSGNVIAAQLPSATAYDPSRPLPLGLPNRTLPVLSFASVPAASITLQGFAMGKTTNVVLTLSNPAHRVTTVRLCQLSTEEEADKLAVCLSGSPGLTEVCAGATIYSTARLTLPSESIRLAAKSDVTEYDDLATTTTSNEFSDDDPK-------VIAFRQGNKVGVHVGVTPAPAGSDKTVFERQPVRALIQMTFDYQNTTSSM 547
[Close]
BLAST of Dynactin subunit 4 vs. TrEMBL
Match: A0A0X3PF27 (Dynactin subunit 4 (Fragment) OS=Schistocephalus solidus OX=70667 GN=DCTN4 PE=4 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 8.396e-92
Identity = 180/528 (34.09%), Postives = 269/528 (50.95%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYLPLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXX---XXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRRYSTQMRLNKRHSEVE-KVAIEIPKQEAKE--NIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRI-----------------------------KPLSKS---------------------EKFEFNKPQNVIITVTNPAHRVTTVKFSPI--RDYTDKI--------------------STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKS--------KGPIICCIQMSFDYKDVTSFL 1442
            M T FD + VQ+LC C R  PL + YFCR+CY +RC NC++HEVD +YCP CLE MAS EA  R+ +C NCFDCPSCG+ LS RA ++  P  +        K   QKVYY+ C++CRW+TR+S I D+ T    W +  NPH +++E L+ ++ + A KEK E+ER+KY  ++NY  L+  S+         R R            + E  V I IP  +A+      ++D+   +K   IE V ++ QR   P+ QP SV    P  K + VKRS+RCR+C+HNLSK + + ++I+F+INL +  HVP+LRI                             +PL                        + F   K  NV++T++NPAHRVTTV+   +   +  DK+                    STA+L LP   ++L AK+++  +D++   T+  +  DD  K       +++ R+ NK+     V P  +        + P+   IQM+FDY++ TS +
Sbjct:   25 MATYFDLRRVQLLCSCNRICPLSQLYFCRHCYDVRCGNCVSHEVDSHYCPNCLENMASAEAKMRRHRCGNCFDCPSCGHNLSTRATIVLVPSAEGSAAKDLSKSTPQKVYYLTCNFCRWSTRDSGIADQATPAGGWQESPNPHEQRVEELVAAYRQLAVKEKNERERSKYVRKRNYMLLM-MSLAEKYPVLTPRFRRCRSSAFGSFGRDTEPAVEISIPGVQAESITEGFNVDD-FVKKPLKIETVTSVFQRYMSPKSQPTSVSQLEPRHKALAVKRSLRCRQCEHNLSKADFNPSAIKFRINLSAFQHVPDLRICLPAQCIASACSGNVIAAQLPSATAYDPSRPLPLGLPNRTLPVLSFASVPAASITLQGFAMGKTTNVVLTLSNPAHRVTTVRLCQLSTEEEADKLAVCLSGSPGLTEVCAGATIYSTARLTLPSESIRLAAKSDVTEYDDLATTTTSNEFSDDDPK-------VIAFRQGNKVGVHVGVTPAPAGSDKTVFERQPVRALIQMTFDYQNTTSSM 543
[Close]
BLAST of Dynactin subunit 4 vs. TrEMBL
Match: A0A1U7QWS4 (dynactin subunit 4 isoform X2 OS=Mesocricetus auratus OX=10036 GN=Dctn4 PE=4 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 9.318e-90
Identity = 173/476 (36.34%), Postives = 264/476 (55.46%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIRDY-TDKI-STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++  ++ V  L Q E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L   S     G+ + R R     ST   L+ R  E +K  ++I   +A   +  + E  + +   + EV  ++QRL  P+ QP S     P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V      +   D I STAK+V+PP EL L  K+    +DE   +    D +DD         +IV+ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L FG +
Sbjct:    1 MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAF-SDKYSLGTRLQRPRAGASISTLAGLSLREGEDQK-EVKIEPAQAVAEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDLQPVSASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLLECEEGDPDNINSTAKVVVPPKELILAGKDAAAEYDE---LAEPQDFQDD--------PDIVAFRKANKVGIFIKVTPQREEGDVTVCFKMKHDFKNLAAPIRPAEESDQGTEVIWLTQHVELSFGPL 458
[Close]
BLAST of Dynactin subunit 4 vs. TrEMBL
Match: Q3TQY2 (Uncharacterized protein OS=Mus musculus OX=10090 GN=Dctn4 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 1.071e-89
Identity = 173/476 (36.34%), Postives = 264/476 (55.46%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIRDY-TDKI-STAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++  ++ V  L Q E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I        D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH +++  LIE + + A KEK+E++R K A R+NY  L   S     G+ + R R     ST   L+ R  E +K  ++I   +A   +  + E  + +   + EV  ++QRL  P+ QP S     P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V      +   D I STAK+V+PP EL L  K+    +DE   +    D +DD         +IV+ RKANK+  F  V P + +G +  C +M  D+K++ + +   E      +V   T   +L FG +
Sbjct:    1 MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSIS--TQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAF-SDKYSLGTRLQRPRAGASISTLAGLSLREGEDQK-EVKIEPAQAVAEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDLQPVSASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENLTHVTLLECDEGDPDNINSTAKVVVPPKELILAGKDAAAEYDE---LAEPQDFQDD--------PDIVAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPVEEGDQGTEVIWLTQHVELSFGPL 458
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Cavefish
Match: dctn4 (dynactin subunit 4 [Source:NCBI gene;Acc:103022004])

HSP 1 Score: 273.478 bits (698), Expect = 2.677e-85
Identity = 162/476 (34.03%), Postives = 257/476 (53.99%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRR----YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIR--DYTDKISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++     V  L + E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I  P     D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH ++I  LIE + + A +EKLE++R K A R+  F     S     G+ + R+R     S    L+ +  E +K  + I   +A + +  + E  + +   + EV  + QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +         K   V++T+TNP   +T V        D  D  STAK+++P  EL L  K+    +DE   +    D +DD         ++V+ RK+NK+ FF  VIP + +G +    ++  D++++ + +  +E     ++V       +L  G +
Sbjct:    1 MASLLQPDRVLYLVRGEKKIRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPCCMHTLSTRATNI--PAPLPDDPTKTAMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRINKLIEYYQQLAQREKLERDRKKLARRRP-FMPQAFSEKYGLGTRLQRQRPGAPVSALYGLSLKEGEEQK-EVSIEPAQALDEVEPLPEDCYTRPINLPEVTTLRQRLLQPDFQPAGASQLHPKHKHLLMKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVSYIPEVRIMSIP---NLRHMKESQVLLTLTNPVESITHVSLFTCEEGDPDDINSTAKVMVPAKELVLAGKDAAAEYDE---LAEPQDFQDD--------PDVVAFRKSNKIGFFIKVIPQQEEGDVTVAFKIRHDFRNLAAPIRPSEDGEMPSEVIWLVHHVELSLGPL 458
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Cavefish
Match: dctn4 (dynactin subunit 4 [Source:NCBI gene;Acc:103022004])

HSP 1 Score: 272.707 bits (696), Expect = 7.228e-85
Identity = 161/482 (33.40%), Postives = 256/482 (53.11%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNY----FFLLNKSIVNDSGSAVNRRR------YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIR--DYTDKISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMANSNDVSLRTVAYKLIFGEI 1520
            M ++     V  L + E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I  P     D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH ++I  LIE + + A +EKLE++R K A R+ +    F      +V   G     +R       S    L+ +  E E+  + I   +A + +  + E  + +   + EV  + QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +         K   V++T+TNP   +T V        D  D  STAK+++P  EL L  K+    +DE   +    D +DD         ++V+ RK+NK+ FF  VIP + +G +    ++  D++++ + +  +E     ++V       +L  G +
Sbjct:    1 MASLLQPDRVLYLVRGEKKIRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPCCMHTLSTRATNI--PAPLPDDPTKTAMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRINKLIEYYQQLAQREKLERDRKKLARRRPFMPQAFSQHTIHVVEKYGLGTRLQRQRPGAPVSALYGLSLKEGE-EQKEVSIEPAQALDEVEPLPEDCYTRPINLPEVTTLRQRLLQPDFQPAGASQLHPKHKHLLMKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVSYIPEVRIMSIP---NLRHMKESQVLLTLTNPVESITHVSLFTCEEGDPDDINSTAKVMVPAKELVLAGKDAAAEYDE---LAEPQDFQDD--------PDVVAFRKSNKIGFFIKVIPQQEEGDVTVAFKIRHDFRNLAAPIRPSEDGEMPSEVIWLVHHVELSLGPL 465
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Sea Lamprey
Match: dctn4 (dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306])

HSP 1 Score: 270.781 bits (691), Expect = 7.827e-85
Identity = 160/440 (36.36%), Postives = 236/440 (53.64%), Query Frame = 3 
Query:  177 PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNY----FFLLNKSIVNDSGSAVNRRR------YSTQMRLNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKF--SPIRDYTDKISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKD-VTSFLTNTEG 1457
            PL + YFCR+CY++R   C++HEVD +YCP+CLE M S EA  +K++C NC DCP C + LS RA  I  P  ++ D  K+  +K YY+AC +C WT+R++ +PD+  ++  W + ENPH  +I  L+E +   A KEKLE++R K   R+NY    F + +   V   G A   ++       S    L  +  + +K  I+I      E I  + E  +     + +V  + QRL  PE Q  S     P  K +L+KRS+RCRKC+HNLSKPE +  S++FKI L ++++VPE+RI  L    K    K   V++T+TNP   +T V     P  D  D  STAK  LP  EL L  ++      E D++    D +DD         ++V  RKANKL  F  V P+   G +    ++  D+++   + L   EG
Sbjct:   23 PLSQLYFCRHCYELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCSDCPCCSHTLSTRATNI--PVPNADDPGKMVSKKAYYLACGFCHWTSRDAAMPDKAVASGGWQEPENPHAPRINKLLEYYRHLAQKEKLERDRKKLVRRRNYLPLAFSMHSMHSVEKYGLAAKLKKQGSINPQSGIAGLMLKEGDDQK-DIKIEAAVTVEEIEPLPEDYYTAPLNLVDVTTLPQRLMQPEFQQDSTSQLHPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSVKFKIQLVAMFYVPEVRIMSLP---KLRCGKESQVLLTLTNPVENITHVTLLSCPEGDKCDLFSTAKATLPQGELVLSPRD---AAAEYDDLADPQDFKDD--------PDVVVFRKANKLGLFVRVTPLFESGDVRVAFKLRHDFRNPAPTLLKPVEG 445
[Close]
BLAST of Dynactin subunit 4 vs. Ensembl Nematostella
Match: EDO33773 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR94])

HSP 1 Score: 264.233 bits (674), Expect = 6.882e-82
Identity = 164/496 (33.06%), Postives = 253/496 (51.01%), Query Frame = 3 
Query:  117 MNTIF--DTKVVQILCQCERYLPLCRTYFCRYCYQIRCANCITHE-----------------------------------------VDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRRYSTQMRLNKRHSEVEKVAIEIPKQEAK--------ENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSP-IRDYTDKIS-------TAK-----LVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGPIICCIQMS 1412
            M TI   D + V + C C    PL R YFCR+C ++RC  C++HE                                         VD YYCP CLE M S EA  ++++C NCFDCPSCGN LS RA  +    + S D K    +KVYY+AC++CRW++R+  IPDR  ++  W + +NP  K+I  L++ + + A  EK+E+ER K + R++Y      +++    S+   + Y+               + E+ ++EA+        E++  + E  + K  ++E V  I QRL +PE QP  + +  P  K +L KRS RCR+C+HNLSKPE + +SI+FKI LG++++VP LRI  +      E +K   V +T+TNP   +  V   P I +  +K S       +AK     +VLP   L L A++E   +DE D + +E+  +D           +V+ R++NKL F+  V P +  G +  C ++S
Sbjct:    1 MATILNPDGQHVLMTCSCHALSPLTRLYFCRHCIKLRCQLCVSHELKEKEQIEILFMKEIVCSSALYCLSLYYAGKLIRVLSLFLQVDSYYCPNCLENMPSAEAKLKRNRCANCFDCPSCGNTLSTRATAV---AVQSDDAKTTQAKKVYYLACAFCRWSSRDVGIPDRSVASGGWQEQDNPVTKRIGTLVDYYRQLAHNEKIEQERKKLSKRRSYMHFAVSTLIPHIISSHLSQGYANIFAFLWLLLVFSAYSQEMTEEEAELKEPSVATEDVDTLPEEYYTKPLVLERVPRISQRLANPEFQPGDISSLYPRHKHLLAKRSQRCRECEHNLSKPEFNPSSIKFKIQLGALHYVPRLRIAGVG---SLECDKEGQVTLTLTNPVENIVKVSLLPYIENTAEKQSKDSSEEDSAKDKNDSVVLPTFPLALAARDEAAEYDEAD-VNAEMFSDD---------PRVVADRQSNKLWFYVKVTPKQPTGDVKVCTEVS 480
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BLAST of Dynactin subunit 4 vs. Ensembl Medaka
Match: dctn4 (dynactin subunit 4 [Source:NCBI gene;Acc:101157066])

HSP 1 Score: 259.996 bits (663), Expect = 4.994e-80
Identity = 161/480 (33.54%), Postives = 260/480 (54.17%), Query Frame = 3 
Query:  117 MNTIFDTKVVQILCQCERYL--PLCRTYFCRYCYQIRCANCITHEVDCYYCPTCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPXXXXXXXXXXXXXXVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIESFNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRRYSTQMR----LNKRHSEVEKVAIEIPKQEAKENIIDIDESXXXXXXXXXXVANIEQRLRDPERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGSIYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPI-RDYTDKIS-TAKLVLPP-IELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKNIVSARKANKLEFFASVIPMKSKGP-IICCIQMSFDYKDVTSFL-TNTEGMANSNDVSLRTVAYKLIFGEIS 1523
            M ++     V  L + E+ +  PL + YFCRYC ++R   C++HEVD +YCP+CLE M S EA  +K++C NCFDCP C + LS RA  I  P     D  K  ++K YY+AC +CRWT+R+  + D+  ++  W + ENPH ++I  LIE + + A +EK E++R K  +R+     L  S     G+ + R+R    +     L+ +  E +K  I I   +A + +  + E  + +   + EV  + QRL  P+ QP       P  K +L+KRS+RCRKC+HNLSKPE +  SI+FKI L ++ ++PE+RI  +       + K   V++T+TNP   +T V  +    D  D I+ TA+++L P  +L L  K+    +DE   +    D +DD         ++V+ RK+NK+ FF  VIP K +   +    +M  D++++ + +  + EG   + +    T   +L  G ++
Sbjct:    1 MASLLQPNRVVYLVRGEKNIIAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPCCMHTLSTRATNI--PAPVPDDPTKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHAQRIGKLIEYYQQLAHREKQERDRKKL-TRRRQCMPLAFSEKYGLGTRLQRQRPGAPLSNLAGLSLKEGEDQK-EISIEPAQALDEVEPLPEDFYTRPVSLPEVTTLRQRLLQPDFQPAGASQLHPRHKHLLMKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVSYIPEVRIMSIP---NLRYMKESQVLLTLTNPVENITHVSLAACEEDDPDDINRTAQVILVPNTQLVLAGKDAAAEYDE---LAEPQDFQDD--------PDVVAFRKSNKIGFFIKVIPQKEEDTDVTVAFKMRHDFRNLAAPVRPSDEGGDAAAEAIWLTHHVELRLGPLA 462
The following BLAST results are available for this feature:
BLAST of Dynactin subunit 4 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
DCTN42.995e-9135.50dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15... [more]
DCTN44.993e-9135.06dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15... [more]
DCTN42.163e-7034.37dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15... [more]
DCTN43.267e-2642.15dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15... [more]
DCTN42.366e-2441.38dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15... [more]
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BLAST of Dynactin subunit 4 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
dnc-44.775e-2924.93DyNactin Complex component [Source:UniProtKB/TrEM... [more]
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BLAST of Dynactin subunit 4 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
DCTN4-p625.899e-5032.42gene:FBgn0033206 transcript:FBtr0088944[more]
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BLAST of Dynactin subunit 4 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
dctn44.621e-8734.31dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306][more]
dctn41.011e-8633.68dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306][more]
dctn42.959e-4342.05dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306][more]
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BLAST of Dynactin subunit 4 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
dctn45.434e-9035.07dynactin subunit 4 [Source:NCBI gene;Acc:595065][more]
dctn48.410e-8934.85dynactin subunit 4 [Source:NCBI gene;Acc:595065][more]
dctn41.285e-7934.45dynactin subunit 4 [Source:NCBI gene;Acc:595065][more]
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BLAST of Dynactin subunit 4 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Dctn45.164e-9336.34dynactin 4 [Source:MGI Symbol;Acc:MGI:1914915][more]
Dctn41.394e-9235.68dynactin 4 [Source:MGI Symbol;Acc:MGI:1914915][more]
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BLAST of Dynactin subunit 4 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q8CBY8|DCTN4_MOUSE9.753e-9235.68Dynactin subunit 4 OS=Mus musculus OX=10090 GN=Dct... [more]
sp|Q9QUR2|DCTN4_RAT9.858e-9235.68Dynactin subunit 4 OS=Rattus norvegicus OX=10116 G... [more]
sp|Q9UJW0|DCTN4_HUMAN1.438e-9035.50Dynactin subunit 4 OS=Homo sapiens OX=9606 GN=DCTN... [more]
sp|Q5R7U7|DCTN4_PONAB4.661e-8935.29Dynactin subunit 4 OS=Pongo abelii OX=9601 GN=DCTN... [more]
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BLAST of Dynactin subunit 4 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0X3P5G06.040e-9334.72Dynactin subunit 4 (Fragment) OS=Schistocephalus s... [more]
A0A0X3P7154.768e-9234.15Dynactin subunit 4 (Fragment) OS=Schistocephalus s... [more]
A0A0X3PF278.396e-9234.09Dynactin subunit 4 (Fragment) OS=Schistocephalus s... [more]
A0A1U7QWS49.318e-9036.34dynactin subunit 4 isoform X2 OS=Mesocricetus aura... [more]
Q3TQY21.071e-8936.34Uncharacterized protein OS=Mus musculus OX=10090 G... [more]
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BLAST of Dynactin subunit 4 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
dctn42.677e-8534.03dynactin subunit 4 [Source:NCBI gene;Acc:103022004... [more]
dctn47.228e-8533.40dynactin subunit 4 [Source:NCBI gene;Acc:103022004... [more]
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BLAST of Dynactin subunit 4 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
dctn47.827e-8536.36dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306][more]
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BLAST of Dynactin subunit 4 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dynactin subunit 4 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO337736.882e-8233.06Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Dynactin subunit 4 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
dctn44.994e-8033.54dynactin subunit 4 [Source:NCBI gene;Acc:101157066... [more]
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BLAST of Dynactin subunit 4 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30000765 ID=SMED30000765|Name=Dynactin subunit 4|organism=Schmidtea mediterranea sexual|type=transcript|length=1727bp
AAATATATTTATTATTTAACATAAATTTTAAAATTAAAAAATTCATCAAA
TTTTTAAAATTATATTTGCTATATTTTTTATTAAAGTTTATGTAACTTTT
TAAAATTTTTCAAGAAATGAACACCATATTTGATACTAAAGTCGTTCAAA
TACTTTGTCAGTGTGAACGATATTTGCCACTTTGCAGGACTTATTTTTGT
CGATATTGCTACCAAATTCGCTGTGCTAATTGCATTACACATGAAGTTGA
TTGTTATTATTGTCCAACATGTTTGGAAACTATGGCGAGTGGAGAAGCGA
ATTCCCGTAAAGATAAATGCACTAATTGCTTTGATTGTCCAAGTTGTGGA
AATATGCTATCTCTACGTGCAGCAGTTATTCGTGAACCTAAACTTGATTC
TAAGGATGATAAAAAAATAGATCTCCAAAAAGTTTATTACATGGCATGCA
GTTATTGCCGATGGACAACCAGAGAATCTGATATTCCTGATAGAAAAACA
TCAACTAACTGTTGGCCTCAGTATGAAAATCCACACAACAAACAAATTGA
AGCTTTAATTGAAAGTTTTAATAAATTTGCTAGTAAAGAGAAGCTGGAAA
AAGAACGCAATAAGTATGCAAGCAGGAAAAATTATTTTTTTCTTTTGAAT
AAGAGTATTGTTAATGATTCTGGTTCTGCAGTGAATCGAAGACGGTATTC
AACACAAATGCGTCTAAACAAACGCCATTCAGAAGTTGAAAAAGTTGCTA
TCGAAATTCCAAAACAAGAGGCAAAAGAAAATATTATTGATATTGATGAA
AGTATTTTTGAAAAGAAGTTTATTATAGAAGAAGTGGCGAATATCGAACA
ACGATTAAGGGATCCCGAAAGACAGCCGAAATCGGTGGAAAATTTTCGTC
CAATTAGCAAACAGATTCTAGTCAAACGTTCAATGCGTTGTCGAAAATGT
GATCATAATCTCAGCAAGCCGGAAATATCTACAAATTCTATTCGATTTAA
AATTAATCTAGGAAGTATTTATCATGTGCCAGAGTTGAGAATCAAACCGC
TTTCCAAATCGGAAAAATTTGAGTTTAATAAGCCTCAAAATGTTATTATT
ACTGTCACGAATCCTGCACATCGTGTGACAACTGTCAAGTTCAGTCCAAT
TAGGGATTATACAGATAAGATTTCCACTGCCAAATTAGTATTGCCACCTA
TCGAATTGAAACTTGGGGCGAAAAATGAGATATTAGGTTTTGATGAAATT
GATAACATAACCAGTGAACTTGATGGTGAAGACGATGTTAAAAAAAAAAA
TCAAACTGAAAAGAATATTGTCTCCGCTCGAAAGGCTAACAAATTGGAGT
TCTTCGCTAGTGTTATTCCAATGAAATCGAAAGGTCCAATCATTTGTTGT
ATTCAAATGAGCTTCGATTACAAAGATGTTACATCGTTCTTAACAAATAC
CGAAGGAATGGCAAACTCAAATGATGTCAGTTTGAGAACTGTTGCATATA
AGTTGATCTTTGGTGAGATATCGAATGTTGAGGAATCTGGCGATCGGGTT
AATAAATGAACTCTTTATCTATCTATGCGGTTTATGAACGTGATTTGGTG
TTGAGTTATTGATTGTATACTACTTTATGATCAATAATATGGTTTCGCGT
AAATATTATTGCAATTTTGGAAAATGTGTTAAATTTTTTGTTGAATTTAT
TTTATATCGAATTAAATAATAAATTTT
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protein sequence of SMED30000765-orf-1

>SMED30000765-orf-1 ID=SMED30000765-orf-1|Name=SMED30000765-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=481bp
MNTIFDTKVVQILCQCERYLPLCRTYFCRYCYQIRCANCITHEVDCYYCP
TCLETMASGEANSRKDKCTNCFDCPSCGNMLSLRAAVIREPKLDSKDDKK
IDLQKVYYMACSYCRWTTRESDIPDRKTSTNCWPQYENPHNKQIEALIES
FNKFASKEKLEKERNKYASRKNYFFLLNKSIVNDSGSAVNRRRYSTQMRL
NKRHSEVEKVAIEIPKQEAKENIIDIDESIFEKKFIIEEVANIEQRLRDP
ERQPKSVENFRPISKQILVKRSMRCRKCDHNLSKPEISTNSIRFKINLGS
IYHVPELRIKPLSKSEKFEFNKPQNVIITVTNPAHRVTTVKFSPIRDYTD
KISTAKLVLPPIELKLGAKNEILGFDEIDNITSELDGEDDVKKKNQTEKN
IVSARKANKLEFFASVIPMKSKGPIICCIQMSFDYKDVTSFLTNTEGMAN
SNDVSLRTVAYKLIFGEISNVEESGDRVNK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0002142parenchyma
Vocabulary: INTERPRO
TermDefinition
IPR008603DCTN4
Vocabulary: cellular component
TermDefinition
GO:0005869dynactin complex
GO:0005737cytoplasm
GO:0005813centrosome
GO:0005856cytoskeleton
GO:0005868cytoplasmic dynein complex
GO:0005938cell cortex
Vocabulary: biological process
TermDefinition
GO:0007097nuclear migration
Vocabulary: molecular function
TermDefinition
GO:0047485protein N-terminus binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008603Dynactin subunit 4PFAMPF05502Dynactin_p62coord: 22..141
e-value: 3.5E-19
score: 69.0
coord: 188..341
e-value: 3.9E-16
score: 58.9
IPR008603Dynactin subunit 4PANTHERPTHR13034DYNACTIN P62 SUBUNITcoord: 1..440