SMED30000763

Overview
NameSMED30000763
Smed IDSMED30000763
Length (bp)742
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30000763 (SMED30000763) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30000763 (SMED30000763) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30000763 (SMED30000763) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30000763 (SMED30000763) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30000763

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 12

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynx progenitor cellSMED30000763h1SMcG0014995 SMED30000763smed_20140614PMID:29906446
Zeng et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30000763h1SMcG0014995 dd_Smed_v4_1671_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30000763h1SMcG0014995 dd_Smed_v4_1671_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30000763h1SMcG0014995 dd_Smed_v4_1671_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30000763h1SMcG0014995 dd_Smed_v4_1671_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30000763h1SMcG0014995 dd_Smed_v4_1671_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30000763h1SMcG0006308 dd_Smed_v6_1671_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cholinergic neuronSMED30000763h1SMcG0006308 dd_Smed_v6_1671_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30000763h1SMcG0006308 dd_Smed_v6_1671_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30000763h1SMcG0014995 dd_Smed_v6_1671_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cholinergic neuronSMED30000763h1SMcG0014995 dd_Smed_v6_1671_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30000763h1SMcG0014995 dd_Smed_v6_1671_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30000763 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.000280:29963..30692 -3596
Homology
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BLAST of SMED30000763 vs. TrEMBL
Match: A0A3P7LQ18 (Uncharacterized protein OS=Dibothriocephalus latus OX=60516 GN=DILT_LOCUS8894 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.651e-15
Identity = 49/124 (39.52%), Postives = 76/124 (61.29%), Query Frame = 1 
Query:  181 PYWGCGYLYTDCIQ-QDKVQGLSVMILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYRVPIWSFLMAIVGGTLLVQVIVLALNTCTCVTRTRSERIIVK 549
            P+WGCG L  DC +  D+   ++V  L  +G+ FLIVV ++D V  C+ T+   + T   R +LL+LG G I+ AV +  + R  +WS+ +A++G    V V +LA+ T  CVTRT  ER++V+
Sbjct:   25 PHWGCGNLIEDCTRGYDRAAIIAVAALLIIGLVFLIVVFIIDLVLICSSTVPPGLIT--ARFILLYLGTGLILIAVIVFTARRNGLWSYFLAVIGSIFAVVVAILAIMTSRCVTRT--ERVVVR 144
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BLAST of SMED30000763 vs. TrEMBL
Match: A0A4S2LLK5 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_007720 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.105e-13
Identity = 47/148 (31.76%), Postives = 85/148 (57.43%), Query Frame = 1 
Query:  106 MIDSVRITXXXXXXXXXXXXCAAATPYWGCGYLYTDCIQQDKVQGLSVMILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYRVPIWSFLMAIVGGTLLVQVIVLALNTCTCVTRTRSERIIVK 549
            MI+  R++ + L ++I L+I   AT +WGCG L+  C  +DK   ++V++L  +G   L VV +LD +  C+   +++      R VLL+LG   ++  + +    ++  WS+ +A VG    +QV +LA+ +  CVT T  +R++V+
Sbjct:    1 MIELRRLSTILLGLAISLVIIGIATNHWGCGSLFEGCQYRDKDATIAVLVLLLIGAVCLAVVFILDLIGLCSDVFVVSAGYLTTRFVLLYLGSAFLLIGILVFTGKKMFAWSYFLATVGTVFAMQVAILAIMSSRCVTGT--QRVVVR 146
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BLAST of SMED30000763 vs. TrEMBL
Match: G7YEJ0 (Uncharacterized protein OS=Clonorchis sinensis OX=79923 GN=CLF_106004 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.105e-13
Identity = 47/148 (31.76%), Postives = 85/148 (57.43%), Query Frame = 1 
Query:  106 MIDSVRITXXXXXXXXXXXXCAAATPYWGCGYLYTDCIQQDKVQGLSVMILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYRVPIWSFLMAIVGGTLLVQVIVLALNTCTCVTRTRSERIIVK 549
            MI+  R++ + L ++I L+I   AT +WGCG L+  C  +DK   ++V++L  +G   L VV +LD +  C+   +++      R VLL+LG   ++  + +    ++  WS+ +A VG    +QV +LA+ +  CVT T  +R++V+
Sbjct:    1 MIELRRLSTILLGLAISLVIIGIATNHWGCGSLFEGCQYRDKDATIAVLVLLLIGAVCLAVVFILDLIGLCSDVFVVSAGYLTTRFVLLYLGSAFLLIGILVFTGKKMFAWSYFLATVGTVFAMQVAILAIMSSRCVTGT--QRVVVR 146
[Close]
BLAST of SMED30000763 vs. TrEMBL
Match: A0A0X3P9R0 (Uncharacterized protein OS=Schistocephalus solidus OX=70667 GN=TR96227 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.638e-13
Identity = 50/144 (34.72%), Postives = 84/144 (58.33%), Query Frame = 1 
Query:  121 RITXXXXXXXXXXXXCAAATPYWGCGYLYTDCIQ-QDKVQGLSVMILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYRVPIWSFLMAIVGGTLLVQVIVLALNTCTCVTRTRSERIIVK 549
            R+T   L +++  +I A A P+WGCG L  +C +  D+   ++V  L  +G+  L+VV ++D V  C+  +   + T   R VLL+LG G I+ AV +  + R  +WS+ +A++G    V V +LA+ +  CV  T SER++V+
Sbjct:    5 RLTATLLGIAVTAIILALALPHWGCGNLIENCPRGYDRDAIIAVAALLIIGLACLLVVFIIDLVLICSSVVPAGLLT--ARFVLLYLGAGLILIAVIVFTAKRNALWSYFLAVIGAIFAVLVAILAIMSSRCV--TGSERVVVR 144
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BLAST of SMED30000763 vs. TrEMBL
Match: A0A183NMJ6 (Uncharacterized protein OS=Schistosoma mattheei OX=31246 GN=SMTD_LOCUS3332 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.006e-13
Identity = 44/150 (29.33%), Postives = 85/150 (56.67%), Query Frame = 1 
Query:  106 MIDSVRITXXXXXXXXXXXXCAAATPYWGCGYLYTDCIQ-QDKVQGLSVMILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYRVPIWSFLMAIVGGTLLVQVIVLALNTCTCVTRTRSERIIVKH 552
            MI+  R++   L ++I L++   AT  W CG L+  C +   K   ++++ L  +G+  L VV +LD +  C+  ++ + +    R +LL+LG  C+V+ + ++       WS+ +A VGG   +QV +LA+ +  C++  R+ER++V+ 
Sbjct:    1 MIELRRLSTTLLGLAITLIVIGMATSQWRCGGLFDSCQRGHSKDAIIAIVALLLIGVIALTVVFILDLIGLCSDVIVASASYITARFILLYLGTACLVTGILVYTGKFDNTWSYFLATVGGVFAMQVAILAIMSSRCIS-VRTERVVVRS 149
[Close]
BLAST of SMED30000763 vs. Planmine SMEST
Match: SMESG000011804.1 (SMESG000011804.1)

HSP 1 Score: 266.544 bits (680), Expect = 1.989e-91
Identity = 147/149 (98.66%), Postives = 147/149 (98.66%), Query Frame = 1 
Query:  106 MIDSVRITXXXXXXXXXXXXCAAATPYWGCGYLYTDCIQQDKVQGLSVMILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYRVPIWSFLMAIVGGTLLVQVIVLALNTCTCVTRTRSERIIVKH 552
            MIDSVRITLVFLFVSIVLLICAAATPYWGCGYLYTDCIQ DKVQGLSVMILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYR PIWSFLMAIVGGTLLVQVIVLALNTCTCVTRTRSERIIVKH
Sbjct:    1 MIDSVRITLVFLFVSIVLLICAAATPYWGCGYLYTDCIQHDKVQGLSVMILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYRAPIWSFLMAIVGGTLLVQVIVLALNTCTCVTRTRSERIIVKH 149
[Close]
BLAST of SMED30000763 vs. Planmine SMEST
Match: SMESG000012166.1 (SMESG000012166.1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.215e-16
Identity = 44/129 (34.11%), Postives = 75/129 (58.14%), Query Frame = 1 
Query:  169 AAATPYWGCGYLYTDCIQQDKVQGLSVMILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYRVPIWSFLMAIVGGTLLVQVIVLALNTCTCVTRTRSE-RIIVKH 552
            A ATPYW CG L TDC   ++ + ++V I F LG+  + VV +L+ +   + T   N + N  RL+LL +G+  ++  V +  S R   WS+++ ++  TL +QV+++ + T +C   TRS   +IV+ 
Sbjct:   21 AIATPYWNCGNLLTDC---NEGKDIAVKIFFMLGLVSIAVVLILEILGIVSITYRGNSSINLARLILLGIGICSLLICVLVFTSIRGHNWSYMLTVIALTLGLQVLIIGMMTSSCTVTTRSRGHVIVRE 146
[Close]
BLAST of SMED30000763 vs. Planmine SMEST
Match: SMESG000012170.1 (SMESG000012170.1)

HSP 1 Score: 53.1434 bits (126), Expect = 9.317e-9
Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 1 
Query:  169 AAATPYWGCGYLYTDCIQQDKVQGLSVMILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYRVPIWSFLMAIVGGTLLVQVIVLALNTCTC 513
            A ATPYW CG +  DC        ++  I F LG+    VV +L+ +         + T N V+L+LL + VG ++  + +  S     WS+++A+VG TL +QV ++ L + +C
Sbjct:   21 AVATPYWHCGNILLDCNHYGT--WVAAKIFFMLGLVCCAVVLILEILGYACLNYRSHGTMNLVKLILLGISVGSLLICILLFNSVTSNQWSYMLAVVGMTLGLQVFIIGLMSSSC 133
[Close]
BLAST of SMED30000763 vs. Planmine SMEST
Match: SMESG000012168.1 (SMESG000012168.1)

HSP 1 Score: 48.9062 bits (115), Expect = 3.286e-7
Identity = 44/136 (32.35%), Postives = 72/136 (52.94%), Query Frame = 1 
Query:  181 PYWGCGYLYTDCIQQDKVQGLSV-MILFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAVCIHASYRVPIWSFLMAIVGGTLLVQVIVLALNTCTC--VTRTRSERIIVKH*I*RMIVRH 579
            PYW CG + +DC   +   GL V  I F LG+   +VV VL+ +  C  +   N + N VRL++L + VG ++  + I+ S  V  WS++  ++  TL VQ  V+ + + +C  V  +  + +IV+    R  V H
Sbjct:   25 PYWHCGNILSDC---NYDAGLVVAKIFFILGLVCFVVVLVLELIQFCTISYYGNASLNLVRLIMLGIAVGSLLMCILIYTSNIVNQWSYMCTVIAMTLAVQAFVIGIMSSSCFVVKSSVPDHVIVR----RTFVTH 153
The following BLAST results are available for this feature:
BLAST of SMED30000763 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A3P7LQ181.651e-1539.52Uncharacterized protein OS=Dibothriocephalus latus... [more]
A0A4S2LLK54.105e-1331.76Uncharacterized protein OS=Opisthorchis felineus O... [more]
G7YEJ04.105e-1331.76Uncharacterized protein OS=Clonorchis sinensis OX=... [more]
A0A0X3P9R04.638e-1334.72Uncharacterized protein OS=Schistocephalus solidus... [more]
A0A183NMJ66.006e-1329.33Uncharacterized protein OS=Schistosoma mattheei OX... [more]
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BLAST of SMED30000763 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30000763 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000011804.11.989e-9198.66SMESG000011804.1[more]
SMESG000012166.15.215e-1634.11SMESG000012166.1[more]
SMESG000012170.19.317e-932.17SMESG000012170.1[more]
SMESG000012168.13.286e-732.35SMESG000012168.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30000763 ID=SMED30000763|Name=SMED30000763|organism=Schmidtea mediterranea sexual|type=transcript|length=742bp
CTCTTCCGATCTGGAAAATACAGGAACTGATTATCCAATCAGACAACTAC
AATTATTACTTGCATGTTTGGTTATTGATTTTCTATTATTTCAAGAGTTT
ATGAAATGATTGATTCGGTAAGAATAACATTGGTATTTTTATTCGTGTCG
ATAGTACTTCTGATTTGTGCTGCAGCAACCCCTTATTGGGGTTGTGGATA
CTTATATACAGATTGTATTCAACAGGATAAAGTTCAAGGTTTGAGTGTAA
TGATTTTGTTCACTCTTGGAATCTGTTTCCTGATTGTGGTAGCAGTACTT
GATTTTGTGAATTGTTGCAATGGAACTCTTTTGCTAAATGTAACTACAAA
TCAGGTGAGATTAGTTTTACTTTTCCTTGGAGTAGGTTGTATTGTTTCCG
CTGTATGTATTCACGCAAGTTATCGTGTTCCAATATGGTCCTTTTTGATG
GCAATTGTCGGTGGAACTTTATTGGTCCAGGTAATAGTTTTGGCTTTGAA
TACTTGTACTTGTGTTACGAGAACTAGATCTGAAAGAATAATTGTAAAAC
ATTGAATTTAAAGAATGATTGTAAGACATGGTATTTTATTTTTTGATCGT
TTATTATTTTTATGTATTCTTTATATCTAACTTTGAATGTATAATACAAT
TTAATTTCTAAATATAATCTGTCTTTAATATTTGAATTTAATTGTATTAA
AATGTAATAATTAAACGTATTTGTGTAATAAATATTTTTGTG
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protein sequence of SMED30000763-orf-1

>SMED30000763-orf-1 ID=SMED30000763-orf-1|Name=SMED30000763-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=150bp
MIDSVRITLVFLFVSIVLLICAAATPYWGCGYLYTDCIQQDKVQGLSVMI
LFTLGICFLIVVAVLDFVNCCNGTLLLNVTTNQVRLVLLFLGVGCIVSAV
CIHASYRVPIWSFLMAIVGGTLLVQVIVLALNTCTCVTRTRSERIIVKH*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000101muscle cell
PLANA:0000110pharynx progenitor cell
PLANA:0000463cholinergic neuron
PLANA:0003116parenchymal cell
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..24
score: 0.512
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 110..132