Protocadherin 1b
|
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30000690 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 10
Homology
BLAST of Protocadherin 1b vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]) HSP 1 Score: 271.937 bits (694), Expect = 4.480e-75 Identity = 220/738 (29.81%), Postives = 357/738 (48.37%), Query Frame = 2
Query: 482 LHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKY-DSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI----IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSP----SDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRE L C NQ+ D +L F +S + + ++ + +E+ DINDN P++ S V++ E + S I A D D N Y L+ G ++ ++ + ++ +L+ + +DRE+ D Y+L + +D GSP R S L + +LD NDN P F+R Y A +LSEN+ IG + V A D+D AN +I Y +A E N G I V+ +D + + +FSVLA D K+ +VV+ V D ND P I I VT +D + N I +V + +A ++V D D G V+C ++ + +L Q S S K++ + D E+ ++I+ D +++ S+ Q++D NDN+P FT+ + P + E+ A D D+ N+++ + + + F I +G++ K LDRE+ E + + ++A D G P GT V + V+D ND P+F LS Y FS+ EN + VG VT ID D N +++ + D +I++ G I++ DRE+QS Y + A+D G P ++ V IN++D NDN P + T + T ++ +G + V A D D G N+E++Y I GNPYG F + + + L + ++ H+LV+ D+GKPP+ L
Sbjct: 99 LRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNF--ASPVITLAIPENTNIGS-LFPIPLASDRDAGPNGVASYELQ--AGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEA-ELSENSPIGHSVIQVKANDSDQGANAEIEYTF--HQAPEVVRRLLRLDRNTGLITVQGPVDRE-DLSTLRFSVLAKDRGTNP--KSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMAN----ISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDF-------------VIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVP-PRSAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTAL 807
BLAST of Protocadherin 1b vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]) HSP 1 Score: 273.478 bits (698), Expect = 6.704e-75 Identity = 220/738 (29.81%), Postives = 357/738 (48.37%), Query Frame = 2
Query: 482 LHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKY-DSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI----IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSP----SDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRE L C NQ+ D +L F +S + + ++ + +E+ DINDN P++ S V++ E + S I A D D N Y L+ G ++ ++ + ++ +L+ + +DRE+ D Y+L + +D GSP R S L + +LD NDN P F+R Y A +LSEN+ IG + V A D+D AN +I Y +A E N G I V+ +D + + +FSVLA D K+ +VV+ V D ND P I I VT +D + N I +V + +A ++V D D G V+C ++ + +L Q S S K++ + D E+ ++I+ D +++ S+ Q++D NDN+P FT+ + P + E+ A D D+ N+++ + + + F I +G++ K LDRE+ E + + ++A D G P GT V + V+D ND P+F LS Y FS+ EN + VG VT ID D N +++ + D +I++ G I++ DRE+QS Y + A+D G P ++ V IN++D NDN P + T + T ++ +G + V A D D G N+E++Y I GNPYG F + + + L + ++ H+LV+ D+GKPP+ L
Sbjct: 99 LRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNF--ASPVITLAIPENTNIGS-LFPIPLASDRDAGPNGVASYELQ--AGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEA-ELSENSPIGHSVIQVKANDSDQGANAEIEYTF--HQAPEVVRRLLRLDRNTGLITVQGPVDRE-DLSTLRFSVLAKDRGTNP--KSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMAN----ISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDF-------------VIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVP-PRSAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTAL 807
BLAST of Protocadherin 1b vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 231.491 bits (589), Expect = 8.138e-62 Identity = 212/722 (29.36%), Postives = 336/722 (46.54%), Query Frame = 2
Query: 506 VVTVKNRIDRESLCPN-----QINCDIMLRFFISPSYVSKSLNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKA---SEYFNIGNN-GNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI-----------IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRII--SDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKT--SNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKP 2575
+ T NRIDRE LC + C L I P+ + + ++I+ D NDNAP +P S V++ + E + SR I A DPD N Y L NG++ G+ I + +L+ + +DREQ D Y + + ED G+P+++ + L + + D NDN P+F + + + ENA +G + + A DAD +N +I Y Q A F + N G I V++++D + + +VLA DG+ R T V I V D ND P I V+++++DP+ + A+I + KD D G+ V C + L+ V D ++ + + D E I+ D + +++ + ++ D NDN P F + V V EN +++ + A D+D+ +N+ I +Q+ G FF +D +G + +V DREE E+F T+ A+D G PP V + V+D ND P+F+ + ++F +SEN ++VG +T D D N + I+ +D F + Y G I + DRE+QS Y V A D G P +ST V IN++DVNDN P + SN + + + G + V AVD+D G N+E+ Y I GN G F + + L + D H+LV++ D G P
Sbjct: 85 IFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFP--SPVINISIPENTLINSR-FPIPSATDPDTGFNGVQHYEL--LNGQSVFGL-DIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH-IPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAI-HKVTVLASDGSSTPARAT----VTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALIT-----------VSDKDTDVNGK--VICFIEREVPFHLKAVY--DNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRR-GLYLTTISATDEDSGKNADIVYQL-GPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPY---------------SGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYP 761
BLAST of Protocadherin 1b vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 231.876 bits (590), Expect = 1.766e-61 Identity = 212/722 (29.36%), Postives = 335/722 (46.40%), Query Frame = 2
Query: 506 VVTVKNRIDRESLCPN-----QINCDIMLRFFISPSYVSKSLNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKA---SEYFNIGNN-GNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI-----------IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRII--SDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF--KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKP 2575
+ T NRIDRE LC + C L I P+ + + ++I+ D NDNAP +P S V++ + E + SR I A DPD N Y L NG++ G+ I + +L+ + +DREQ D Y + + ED G+P+++ + L + + D NDN P+F + + + ENA +G + + A DAD +N +I Y Q A F + N G I V++++D + + +VLA DG+ R T V I V D ND P I V+++++DP+ + A+I + KD D G+ V C + L+ V D ++ + + D E I+ D + +++ + ++ D NDN P F + V V EN +++ + A D+D+ +N+ I +Q+ G FF +D +G + +V DREE E+F T+ A+D G PP V + V+D ND P+F+ + ++F +SEN ++VG +T D D N + I+ +D F + Y G I + DRE+QS Y V A D G P +ST V IN++DVNDN P SN + + + G + V AVD+D G N+E+ Y I GN G F + + L + D H+LV++ D G P
Sbjct: 85 IFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFP--SPVINISIPENTLINSR-FPIPSATDPDTGFNGVQHYEL--LNGQSVFGL-DIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH-IPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAI-HKVTVLASDGSSTPARAT----VTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALIT-----------VSDKDTDVNGK--VICFIEREVPFHLKAVY--DNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRR-GLYLTTISATDEDSGKNADIVYQL-GPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPY---------------SGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYP 761
BLAST of Protocadherin 1b vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 231.876 bits (590), Expect = 1.899e-61 Identity = 212/722 (29.36%), Postives = 335/722 (46.40%), Query Frame = 2
Query: 506 VVTVKNRIDRESLCPN-----QINCDIMLRFFISPSYVSKSLNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKA---SEYFNIGNN-GNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI-----------IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRII--SDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF--KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKP 2575
+ T NRIDRE LC + C L I P+ + + ++I+ D NDNAP +P S V++ + E + SR I A DPD N Y L NG++ G+ I + +L+ + +DREQ D Y + + ED G+P+++ + L + + D NDN P+F + + + ENA +G + + A DAD +N +I Y Q A F + N G I V++++D + + +VLA DG+ R T V I V D ND P I V+++++DP+ + A+I + KD D G+ V C + L+ V D ++ + + D E I+ D + +++ + ++ D NDN P F + V V EN +++ + A D+D+ +N+ I +Q+ G FF +D +G + +V DREE E+F T+ A+D G PP V + V+D ND P+F+ + ++F +SEN ++VG +T D D N + I+ +D F + Y G I + DRE+QS Y V A D G P +ST V IN++DVNDN P SN + + + G + V AVD+D G N+E+ Y I GN G F + + L + D H+LV++ D G P
Sbjct: 85 IFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFP--SPVINISIPENTLINSR-FPIPSATDPDTGFNGVQHYEL--LNGQSVFGL-DIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH-IPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAI-HKVTVLASDGSSTPARAT----VTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALIT-----------VSDKDTDVNGK--VICFIEREVPFHLKAVY--DNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRR-GLYLTTISATDEDSGKNADIVYQL-GPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPY---------------SGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYP 761
BLAST of Protocadherin 1b vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 167.162 bits (422), Expect = 2.223e-41 Identity = 195/695 (28.06%), Postives = 316/695 (45.47%), Query Frame = 2
Query: 446 YRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSL-NVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDV----YELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEI---IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKE-FQIL------AIANFDREEKSME---KVDILCKDQAYNTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDR--GEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEG 2458
Y + +GN N L I+ ++ V+ +DRE+L + I D++ +P S ++ + ++D+NDNAP + S V+ E N I KA D D N ++ Y + + +G+ + D ST +V RE++D ++ A+D P + ++ L I ++D ND+ P A+ L EN IG V A D D NG I Y +E SE F I ++G I K +D + + + V A D G P T + +++ D ND P +VT + + II + + N + D+ ++ +D+E F IL AI + E K + +V+I DQ + +V +D +++P F F ++ E++ + V + A D D N++I + I + FF+ID SSG + LDRE+ F+V + A D PP + + + + DIND P+F+ S Y +ISE+ +GTS V+AID D+ N I D F ES SSS Q+ R DR G + LDRE+ + +L + A D G P S ++ + + + + DVNDN PTF+ + ++ I VG +GT+ A D D G+N++I ++I G
Sbjct: 307 YSLGEGNGK-NLLAINAKSGVIQTAAPLDRETL--SLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILE---NITIPAVIATVKATDEDFGTNGKVHYSMA-----SSSGIGGLTIDYSTG--------EVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMIT-LEENVAIGEEVGRVYAIDEDSGPNGIIKYSME---GSEDFIIDEDSGLIKTTKLLDRETTAR-YSLKVTARDMGTPSLNTST---TIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDN------------------------DEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQG-GLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPI-GYPVITLKAEDHDRGDNARIVYSI--DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNG------IVDYFLNES----SSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP-SLSAASEITLTLSDVNDNAPTFEQLSYDLY-IAENSPVGSTVGTIVARDADEGDNADISFRIFGG 934 HSP 2 Score: 156.762 bits (395), Expect = 4.153e-38 Identity = 159/582 (27.32%), Postives = 275/582 (47.25%), Query Frame = 2
Query: 857 ELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSI--VFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYL-LTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES--VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPP 2578
E+ K +DRE +D + L + A + P + S +++ +LD DN PIF++ Y+ ++ E+A IG L+V A+D D NG+I Y + + I +G I +D + + + V+A D + T E I V+D ND P V + +T I+EN I +V+A ++ D DFG V S++++ + + S E + D + + V I KD A S ++ ++D ND++P LE VG V A+D+D+ N I++ + G+E+ F + SG + T ++LDRE T ++++ + A+D G P + + + + DIND P F Y +ISE G+ + T+ A+D D + K+ YRI +E+ + S L D+G I++ + ++Q H + + + A D G V + I DVN + P F N FS++ E +GY + T++A D D G+N+ IVY I+ +F + + + ++S L ++D ++++A D PP
Sbjct: 221 EIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFG-EIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAPLDRET-LSLIRLDVIASDKGTPKRESTAMVE--ITVVDVNDNAP---VFASDSYNVT----ILENITIP-AVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEVTLR--ERIDAKNSPITAV-IRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED-FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRI------EEADREVFSILDIG----DQGAILS-VSGELKRQDHKVRVEISATDQG---GLQGRCVVNVFIDDVN-SAPYF---NDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQ---FFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPP 763 HSP 3 Score: 151.369 bits (381), Expect = 1.488e-36 Identity = 179/671 (26.68%), Postives = 306/671 (45.60%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSK-SLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIE--DQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEE------HFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEE 2455
L ID T VT++ RID ++ + I I + P+ S L + ++DIND+AP+ K+++ E E ++ A D D N I Y ++ G D + I DS + K++DRE Y L + A D G+P S + + + D NDN P FD+ +Y +SE G +T+ A D D + KITYRIE D++ +IG+ G I+ +K V A ++ G C VV + ID+ + P H P + + I E+ I V+ ++ +D D G + S+ ++ R++ PS + + + + DRE+++ V + D A + S +++ D NDNSP+FT + + E+ V F+ +V A+D D N +++ + NE F++D +SG + LDRE+ + I A+D G P + +T+ + D+ND P F Y+ I+EN+ +G++VGT+ A D D N + +RI +K + + ++ I+T+ D E +++ + +G +ST V+I++ DVNDN P K + + + +IG + A D D +N+ + Y +EE
Sbjct: 423 LTIDYSTGEVTLRERIDAKN---SPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVY---AIDEDSGPNGIIKYSME---GSED---FIIDEDSGL-----IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVT-ISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAIL-----SVSGELKRQDHKVRVEISATDQGGLQGRC-VVNVFIDDVNSAPYFNDH-----PFSVK--IPEHSPIGYPVIT-LKAEDHDRGDNARIVYSIDSSQFFRID---PSSGDISVSS--DLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFL-QVSAIDADIGPNGIVDYFL--NESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAE------QNGVVRILTRAEFDYEAKANKFFFELQASSGQ---LSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQ-MARQIGFIPAFDPD--QNATLEYFLEE 1039 HSP 4 Score: 150.599 bits (379), Expect = 3.196e-36 Identity = 179/670 (26.72%), Postives = 285/670 (42.54%), Query Frame = 2
Query: 602 VSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNT--ASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQI----DSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGN---PYGYFSFNTQNKKLILNSVLSKQDDHKLV--ISACDKGKP 2575
S ++ V +LD+ DN+P + + S F E + T+ A D D EN +I+Y L + NGK + I S + +DRE + + L +IA D G+PKR + + I ++D NDN P+F Y L EN I V TV A D D+ NGK+ Y + I + G + +R+ I DA + A DGA T + I VID ND P +I + +E V + + D D G I+ S+ ++ +++ S K ++L DRE + + + +D + S +I + D NDN+P F + + + + + AVD D ++ KI ++I + F I D + L R++ K V I A D G G +V + + D+N P F+ + I E++ IG V T+ A D D N ++ Y I S +F + I G+I LDRE ++ + + V A D+ P TS T +++ + D+NDN P F TS+ +I VG V A+D D G N + Y + E + F + + L ++S L ++ +V I A D+G P
Sbjct: 252 ASTTVVVHVLDVQDNSPIFEKDSY---FGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKN---LLAINAKSGV-----IQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTIL-ENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEVTLRERI--DAKNSPITAVIRAKDGAQPALSST--VPLTINVIDINDHAPTLIA--------AQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLL-----DRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQ--KITYRIEEADREVFSILDIGDQGAILSVSGELKRQD-HKVRVEISATDQGG--LQGRCVVNVFIDDVNS-APYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFR--------------IDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTS-TQIEVILDDINDNSPQF-TSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP 870 HSP 5 Score: 130.183 bits (326), Expect = 4.742e-30 Identity = 104/347 (29.97%), Postives = 166/347 (47.84%), Query Frame = 2
Query: 1457 VSCSLSNNDKMRLEQVSPSDKE----FQILAIANFDREEKSMEKVDI---LCKDQAYN------TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIE 2452
V S +++ + V+P D F + ++ R KSM++ + + K AY +AS ++V +LD DNSP F + +F + + V V A D D+ N +IE+ + GN ++ I++ SG + T LDRE + ++A D G P + T +V I VVD+ND P F+ Y +I EN I + TV A D D N K+ Y + S SS + I + GE+ + +D K S + A D P + +ST + IN+ID+ND+ PT + K + +++ ++G E+G V A+D D G N I Y +E
Sbjct: 187 VKASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMAS-----------SSGIGGLTIDYSTGEVTLRERID-AKNSPITAVIRAKDGAQP-ALSSTVPLTINVIDINDHAPTLIAAQKMI-TLEENVAIGEEVGRVYAIDEDSGPNGIIKYSME 519
BLAST of Protocadherin 1b vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 157.918 bits (398), Expect = 1.458e-38 Identity = 177/632 (28.01%), Postives = 287/632 (45.41%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDV----YELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEI---IVHVTKRDPLTNEPAIIENEVISN----SVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDR--GEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEG 2458
+ + ++D+NDNAP + S V+ E N I KA D D N ++ Y + + +G+ + D ST +V RE++D ++ A+D P + ++ L I ++D ND+ P A+ L EN IG V A D D NG I Y +E SE F I ++G I K +D + + + V A D G P T + +++ D ND P +VT + + II + + N + IE D R++ S + + IL+++ + + +V+I DQ + +V +D +++P F F ++ E++ + V + A D D N++I + I + FF+ID SSG + LDRE+ F+V + A D PP + + + + DIND P+F+ S Y +ISE+ +GTS V+AID D+ N I D F ES SSS Q+ R DR G + LDRE+ + +L + A D G P S ++ + + + + DVNDN PTF+ + ++ I VG +GT+ A D D G+N++I ++I G
Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILE---NITIPAVIATVKATDEDFGTNGKVHYSMA-----SSSGIGGLTIDYSTG--------EVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMIT-LEENVAIGEEVGRVYAIDEDSGPNGIIKYSME---GSEDFIIDEDSGLIKTTKLLDRETTAR-YSLKVTARDMGTPSLNTST---TIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEAD-----REVFS-------------ILDIGDQGAILSVSGELKRQDHKVRVEISATDQG-GLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPI-GYPVITLKAEDHDRGDNARIVYSI--DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNG------IVDYFLNES----SSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP-SLSAASEITLTLSDVNDNAPTFEQLSYDLY-IAENSPVGSTVGTIVARDADEGDNADISFRIFGG 575 HSP 2 Score: 150.984 bits (380), Expect = 2.321e-36 Identity = 179/671 (26.68%), Postives = 306/671 (45.60%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSK-SLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIE--DQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEE------HFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEE 2455
L ID T VT++ RID ++ + I I + P+ S L + ++DIND+AP+ K+++ E E ++ A D D N I Y ++ G D + I DS + K++DRE Y L + A D G+P S + + + D NDN P FD+ +Y +SE G +T+ A D D + KITYRIE D++ +IG+ G I+ +K V A ++ G C VV + ID+ + P H P + + I E+ I V+ ++ +D D G + S+ ++ R++ PS + + + + DRE+++ V + D A + S +++ D NDNSP+FT + + E+ V F+ +V A+D D N +++ + NE F++D +SG + LDRE+ + I A+D G P + +T+ + D+ND P F Y+ I+EN+ +G++VGT+ A D D N + +RI +K + + ++ I+T+ D E +++ + +G +ST V+I++ DVNDN P K + + + +IG + A D D +N+ + Y +EE
Sbjct: 64 LTIDYSTGEVTLRERIDAKN---SPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVY---AIDEDSGPNGIIKYSME---GSED---FIIDEDSGL-----IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVT-ISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAIL-----SVSGELKRQDHKVRVEISATDQGGLQGRC-VVNVFIDDVNSAPYFNDH-----PFSVK--IPEHSPIGYPVIT-LKAEDHDRGDNARIVYSIDSSQFFRID---PSSGDISVSS--DLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFL-QVSAIDADIGPNGIVDYFL--NESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAE------QNGVVRILTRAEFDYEAKANKFFFELQASSGQ---LSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQ-MARQIGFIPAFDPD--QNATLEYFLEE 680 HSP 3 Score: 81.6481 bits (200), Expect = 3.255e-15 Identity = 57/174 (32.76%), Postives = 86/174 (49.43%), Query Frame = 2
Query: 1931 LVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIE 2452
+V I VVD+ND P F+ Y +I EN I + TV A D D N K+ Y + S SS + I + GE+ + +D K S + A D P + +ST + IN+ID+ND+ PT + K + +++ ++G E+G V A+D D G N I Y +E
Sbjct: 1 MVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMAS-----------SSGIGGLTIDYSTGEVTLRERID-AKNSPITAVIRAKDGAQP-ALSSTVPLTINVIDINDHAPTLIAAQKMI-TLEENVAIGEEVGRVYAIDEDSGPNGIIKYSME 160
BLAST of Protocadherin 1b vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0]) HSP 1 Score: 156.377 bits (394), Expect = 5.774e-38 Identity = 199/728 (27.34%), Postives = 319/728 (43.82%), Query Frame = 2
Query: 527 IDRESLCPNQIN---------CDIMLRFFISPSYVSKSLN------------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEII---VHVTKRD-PLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCS-LSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTA--SKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDRE--ETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDR--GEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSF-----NTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCS 2587
I +LCP Q + C I+ R S ++ L + I DINDNAP W +S +G SRT+ A DPD+ +N I Y + D + D T R + ID + + AED GSP + L+++ +LD P F++A + ++ E+ IG + V A ++ + +I Y +++Q E+ + +G + ++K D++ K +Q +V+A + E T + I + D ND P H+T R+ P EP ++ + D D G VS LS + + V+ + LA F + + KD ++ S +I ++D++ +P+F+R + R E+ +P + +G V A+ SK+++ I G+++H F ID +GK+Y + LD + +T N+ G ++ V I + D ND P+FS SL E SI E+ + V A D+D N +++Y IIS S P I D+ G++ T LLD E +Y L V A D G P +S T+ I+++DVNDN P F+ S T+ ++ + +G V A D D EN +IVY+I G+ YF N K+ I V+S D + I A DKG PP+ S
Sbjct: 377 IGSSALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQIIIEHPQLLTIGDINDNAPQWHSSQIHISLNRTQGG---SRTL---TAKDPDLGQNGWIRYSVLDTE--------LVSIDKETGR---IFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQV-EIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQD--EHLTVDTMSGTVCIQKTFDFEKQ-KSYQTTVIATNANSE----TSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLV------------VSASDMDSGTFGEVSYHILSESSSFSINPVTGEVFAQKPLARGRF--------HLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDI-LPGIAIGSVGAM-------SKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADVHDTVLLNIQATLPSG----ESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIIS-------------SHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIP-PRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTI-VGKVVARDKDSLENGQIVYRITNGSE--YFGIDEKLGNVYTKRSIDREVISHVD---ISIVAEDKGVPPRSS 1027 HSP 2 Score: 142.895 bits (359), Expect = 6.864e-34 Identity = 170/666 (25.53%), Postives = 287/666 (43.09%), Query Frame = 2
Query: 620 VEILDINDNAPSWPQQSKVVSFTEFE--GNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRI------ELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKA--SEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEI-IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDP--DFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKG 2569
VE+ D NDNAPS+ Q + +EF G T+ DV+ + + N N V+K+ SR++ +L+ +DRE D YEL++ A+D G P + G L I+I+D NDN P+F R++Y A+ +S N +IG +TV A DAD N +I+Y I+ A + F I +G I ++ V+A D G+P + V I V+ P + I+ + + +N ++EN + S++A + + D R I S +L Q + + +L DRE S + L + + I D NDN+P++ + H + A D D +N I + ++ E ID +G+++ +D + + A+DGG P + V +++D P+F +L++ I E+ IGT + V A + + +++Y + +++ + + G + + D EKQ Y TV+A + NS TST+ + I + DVNDN+P F N+ +++ + V A D+D G E+ Y I + FS N ++ L++ H LV+SA D G
Sbjct: 110 VEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGDGPKFDVHR-----FVILQGNV---NNVFKL-----ASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTAS-VSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASL---LPASTHDVIVVASDHGSPS---LSSSAVVTITVLGSTLSSPPLDIIWLVE----SNSAHLMENSTL-GSIVARVSIAQQYRDTKLRLIGSSAL-------CPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQIIIEHPQLLTIGDINDNAPQWHSSQIHISLNRTQGGSRTLT----AKDPDLGQNGWIRYSVLDTE--LVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQ----NQDEHLTVDTM---------SGTVCIQKTFDFEKQKSYQTTVIATN---ANSETSTSLISIRLKDVNDNWPIFY-PNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSES--SSFSINPVTGEVFAQKPLARGRFH-LVVSAKDGG 717 HSP 3 Score: 135.576 bits (340), Expect = 1.221e-31 Identity = 157/588 (26.70%), Postives = 262/588 (44.56%), Query Frame = 2
Query: 872 KVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKG-FQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEE-HFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPK---CSNPLWVT 2605
K D E+ Y+ +IA + S T + I++ D NDN PIF +Y+ + E L VSA D D G+++Y I + +S F+I G + +K + +G F V A DG + + + I VID++ + P+ +K + T E +L I + G V S+ + D+ S + +I D + ++I + + +V I D NDN P+F+ + + E+ + F V A DKD ++N ++ + II + +ID +G++ T +LD E T + + + A D G PP++ + I V+D+ND PEF S Y + EN+ T VG V A D+D N ++ YRI + YF L G + TK +DRE SH +++VA D G P +ST + +I+++DVNDN P+ + V + + IGT+ A+D D G N ++Y+ + + F + N + L L+ D+ +L + D+G P K C P+ ++
Sbjct: 599 KTFDFEKQKSYQTTVIATNANSETSTSLIS--IRLKDVNDNWPIFYPNEYHLT-VREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSS--FSINPVTGEVFAQKPL-----ARGRFHLVVSAKDGGGQSSENS--ANIHITVIDKDTKTPQF--SRSKYEIRTTE-----------DILPGIAIGS--VGAMSKVKYSIYSGDQDH--NFSIDEDTGKIYVTRYLDADVHDTVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFY-VVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNG----SEYFGIDEKL---------GNVYTKRSIDREVISHVDISIVAEDKGVP-PRSSTASARISVLDVNDNPPSCLSITPIV--VPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQS--SLFVVKS-NGDVYLRRQLNASDERHQRLSVIVSDQGVPRKSVVCHVPVRIS 1137 HSP 4 Score: 99.7525 bits (247), Expect = 1.100e-20 Identity = 164/709 (23.13%), Postives = 285/709 (40.20%), Query Frame = 2
Query: 443 SYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFI------SPSYVSKSLNVEILDINDNAPSWPQQS--------KVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFL-KDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDEND----EKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKM-RLEQVSPSDKE------FQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQID-SSGKM----YTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDW---KPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQ---SHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEE 2455
+Y I +GN + + +D E V+ +DRE I+ R+ + S + ++V + ++NDN PS+P +V S+ G K DV+ + + YFL D +G+T D T P+ D E + + L + A D T L I + D NDN P F + Y + G + A D D A G +TY + Q +S F + + K + AG + + +V A D + + V+I + D EK E V + + + + E S H ++DP+ + + + DK RL P D+E FQ+ D E + +KV C +LD NDN P FT V ++ L+++ +G++MA D+D+ N ++ ++I+ GN+ + ++ +G + + LD + + + A+D G P + G V + + ++ W P F L +YE + E+ +GT + + A +R N + Y + KE + I GE+ K LD E + S YL ++ +G N ++ +KI + V++ P F S+ T I + G +G ++A+D D G + + Y I +
Sbjct: 1862 TYSIVEGN-IDSAFSVDSEG-VIRTNLELDRE----------ILERYSLKVIGTGSGQQIGTRVDVRVNNLNDNVPSFPMSKPRRVPENLRVGSYVATVGAK--------------DVDNLAPLRYFLVSDSSGQTPT---HFNIDQFTGTIHLTAPL---DFEVLPEHTLTIKATDGSFDTFT---NLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLD--ARGALTYSL-GQGSSSIFRVAPESGALFMKVLP-PAGER-YLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLSGE---ESREFHYRIQDPE-------ASKIFSIDKFGRLFVAGPIDREQRATHEFQV----EIDNEMMTSQKVQCKCH------------VIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVS-LKMSSWSGSAPFFVLPVYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSL------KEHQGKLG-------IDVKTGELTLKTHLDWESEPIISMYL----SVSDG--NGRSAVVPLKIVVEPVDEFAPVFTKSSYT-LQIPISTPAGESVGQMQAIDEDGGVHGVVKYSISD 2483 HSP 5 Score: 92.0485 bits (227), Expect = 2.349e-18 Identity = 83/272 (30.51%), Postives = 127/272 (46.69%), Query Frame = 2
Query: 1514 DKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-------SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINII 2302
++ +I IA+ D E++S K DI+ + + I+ ++ D NDN+P F +V + E A + F + D D + F I+ GN + F++ S + LDRE +K+ + I A+DGG P K G +IE++D ND P FS S Y S+S N IG+ + TV A D D+ N+++ Y I S F S S G I T L S + + VVA D+G P S +S+ V I ++
Sbjct: 73 ERSGEISTIAHLDYEKRS--KFDIVAVKVEESGETIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVT-DGDGPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQS----------GVITTTASL--LPASTHDVIVVASDHGSP-SLSSSAVVTITVL 328 HSP 6 Score: 80.8777 bits (198), Expect = 5.498e-15 Identity = 86/359 (23.96%), Postives = 155/359 (43.18%), Query Frame = 2
Query: 1541 ANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASV-PNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDW-KPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDR-GEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDH------KLVISACDKGKPPKCS 2587
A D E + I D +++T + +F + D NDN+P F++ + + A+ P ++ A D DA + + + F++ SG ++ K + E++ VT+ A D G P + + V++ + + KP F + + F + EN+ IG +G ++ + + + YRI SK + D+ G + +DRE+++ + V IDN S + ++D NDN P F TS S++ + + G +IG + A D D GEN + Y+I GN + N + LN Q D ++++ A D G P + +
Sbjct: 1988 APLDFEVLPEHTLTIKATDGSFDTFTNLTIF-VSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDAR--GALTYSLGQGSSSIFRVAPESGALFMKVL--PPAGERYLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLSGEE-----SREFHYRIQDPEASK-------------IFSIDKFGRLFVAGPIDREQRATHEFQV-EIDNEMMTSQKVQCKCHVIVLDENDNLPVF-TSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAA 2321 HSP 7 Score: 72.0182 bits (175), Expect = 2.691e-12 Identity = 155/642 (24.14%), Postives = 257/642 (40.03%), Query Frame = 2
Query: 587 ISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGP----IFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMV----IDENDEKP-EIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSME-KVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGK-MYTKQVLDREET-------EKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTA-IDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIE 2452
I P + +L + +LD+NDNAP + + + E N + A D D EN QI Y + NG G+ + + T R IDRE + ++ ++AED G P R+ + I +LD NDN P I + LS IG T+ A D D NG + YR + Q S F + +NG++ +R+ ++ + + + SV+ D G P RK+ C V + + D ++P + + + K P + +S+ ++ E+ + F R+ V +S+ P + L I D+ ++ ++ +L +A N K +I D N K R +GE A + ++ E ++D +G +Y L R +T EKFN T DG V +E+ KP F +I E+ G+ + TV A + D + ++ ++ D FS + + G+I L Y L V A +G P +T V +N+ DVND+ P F S TV + ++ G + V A+DLD ++ EI Y ++
Sbjct: 919 IPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLE---NSPPKTIVGKVVARDKDSLENGQIVYRIT--NGSEYFGIDEKLGNVYTKRS--------IDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLSITPIVVPAGSPLS--TAIG----TIVAMDPDKGLNGSVLYRAQLQ--SSLFVVKSNGDVYLRRQLNA-SDERHQRLSVIVSDQGVP---RKSVVCHVPVRISKGSADIQIQEPFQKYIEIPKSCPTGCRLTTLNATGVSSWLIQSSEISN-HFAIREGVLFMISH----------PIHRPPYSLVIVLSDKNDRQKSIQLRVLASGEAAN---KEETIRISDSNSIGTKIGR----------------LGEKSA-------DGSFFYRFSSEESCPLELDQTGGLLYLADGLRRGDTHNFSCFFEKFNTT----DGSAEEMR----VDLEISRTKSDKPRFDTGHLRVNIREDTPTGSIITTVNATVSDDSASPISYRFPLLIDNFSIDQF---------------TGDITLIDTLHWHVTPTYNLIVEAFTSG-PG---TTLLVTVNVDDVNDHTP-FIVSQPTVL-LPSSYRKGGMVHRVVAIDLD--KDPEIRYSLK 1467 HSP 8 Score: 61.2326 bits (147), Expect = 5.368e-9 Identity = 44/162 (27.16%), Postives = 74/162 (45.68%), Query Frame = 2
Query: 2090 RIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKP 2575
RI++ ++ES F++ + P I G I + LDRE +LL ++ D G N + TV++ + D NDN P S + I + VG + A D+D G+N + +++ E + G + L+L + S Q K+ + D G P
Sbjct: 1652 RILATGMTEESRFRFQGNAPKFSINSTTGSI-SVLPLDREASQEHLLIIILTDGGSRND---SCTVRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFSFELLE-DSSGSLDLVPETGDLVLRRLSSLQ-SWKIKLRVVDHGVP 1807
BLAST of Protocadherin 1b vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 144.05 bits (362), Expect = 3.057e-34 Identity = 187/737 (25.37%), Postives = 319/737 (43.28%), Query Frame = 2
Query: 443 SYRIFDGN----KLLNCLHIDPETHVVTVKNRIDRESLCP--NQINCDIMLR------FFISPSYVS-KSLNVEILDINDNAPSWPQQSKVVSFTE-FEGN-KLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELM----------PIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIE-DQKASE-------YFNIGN--NGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIV-----SCSLSNNDKMRLEQVSP---SDKEFQILAIANFDREEKSMEKVDILCKDQAYNTAS-KSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGE--------VMAVDKDAER-NSKIEFQII----GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKD-------GGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGE-NSEIVYQIE 2452
+Y D N + +N ID T +V +++ + L N IN ++++ + S ++ S +L + I D+N+N P +P +K + EG K + TI +A D D + N I V+ + Y S SR+ ++ P V DRE ++ + A D G G + ++++D NDN P F+R Y +S +G +TV A D D N +ITY +E D A E +F + N +G I + K I + F F+V+A D G PE + + +V + V+D+ + P+ + +T + EN ++ +L V D D++ S N + + Q + ++ +++ + D E+ + + + D AS K+ V ++ D ND P+FT ++ PN + + V A+D D++ +++ ++I+ G E F+ID +G+++ + DRE+ + + +T+ A D G + P V I + D+ND P F Y + E+ G G V T+ A DL ++ ++Y +I +PF +R D G I K LD E Y L ++A D H +TT V I+I DVNDN P F+ I+ + + V A D D E +S IVY++E
Sbjct: 781 TYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDI--------------VYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPS-YETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMK--TQKFIFNVIADDNGIPEALQSS--AQVTLNVLDKQQKAPKWQTSPDCKPGIT----VDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKA--HDLDKHSNLRYHLIG---------AGGGRIPFG-VRTDSGTIFVKEPLDFEASDQYHLVLIASDGRH----NATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLE 1478 HSP 2 Score: 132.88 bits (333), Expect = 8.117e-31 Identity = 165/595 (27.73%), Postives = 258/595 (43.36%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADY-LANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYD--AGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKP----EIIVHVTK-RDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKM-RLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASK----SIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQI--------DSSGKMYTKQVLDREET---EKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP 2323
+ + I D+NDNAPS+ +Q + E EG + TI KA D D + N + + + G+ GV + DS T + + +D E D Y L+LIA D + + + I I D NDN P F++ KY + E+ +I V V A DAD + +I YR+E Q A E F IG +G I + K +D D AGV + F V AID + G +V + V D ND P + ++ + R+P+ ++ + + E + ++G IV L N + + R++Q +I A+ + DRE S + I + S+ ++ ++ D NDN+P F + + +E + V A D D E + + E +F + S G + KQ LD E+ + F++ I DG + V + +VD ND P E + E+ GTS+G TA DRD A ++RI K + I D G + + LDRE + Y L + A DN ++ V + + DVNDN P
Sbjct: 1321 VQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITI---KAHDLDKHSNLRY-HLIGAGGGRIPFGV---RTDSGT-----IFVKEPLDFEASDQYHLVLIASDG---RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDD--DGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYG---IVRNKLINGESVFRIDQ-----NTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAA---VHVALVDRNDHAPHIH-GATEHRVREDVPRGTSIGRYTATDRD--AGDTARFRINRQSDPKRQF----------TIDQD-GTLRVAHTLDREDIAVYNLIIEAYDN---SNNIGRQMVAVYLQDVNDNGP 1870 HSP 3 Score: 125.561 bits (314), Expect = 1.263e-28 Identity = 146/548 (26.64%), Postives = 242/548 (44.16%), Query Frame = 2
Query: 923 EDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKG---FQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNND-----KMRLEQVSPSDKEFQI---LAIANFDREEKSMEKVDILCKDQA-------YNTASKSIVFQILDRNDNSPKFTRVFHF----RVLENA--SVPNMFVGEVMAVDKDAERNSKIEFQII---GNEEHFFQIDSSGKMYTKQ---VLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLP-FQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYE--IGTVEAVDLDFGENSEIVYQI-EEGNP 2464
EDN R ++L I+I D NDN P F R Y A ++ E+ + L V+A D D N +ITY +++ F+I +NG I + +D D + ++F+V A D E + + I + NDE + P + A + + + + I+ +D D RD V+ S + + KM L + ++ ++ A+ E + I+ D + +T+ +++ I D N+N P+F + +++E + P V +V A D D+ N I + + F ID + T V DRE + +VT+ A D GD P G ++EVVDIND P+F YE S+S +GTSV TV A D D N ++ Y + D + E ++ + L F+++ GEI + + Q ++ V+A DNG P + S+ V +N++D P ++TS I E+V I AV NS+++Y++ G P
Sbjct: 619 EDN----RESHVDLTIRIDDVNDNVPTFTRPLYTA-QVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHN----FSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHG-EPVSLSSSAMIHIRTENTNDESAVFL-------PTSQYTAFVAEDAQGGTPVIQIQARDAD---RDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIV-KVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGE---EHQNDLDFFELVNRRSGEITLIKPIPMKTQK-FIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGP 1141 HSP 4 Score: 113.235 bits (282), Expect = 8.961e-25 Identity = 185/712 (25.98%), Postives = 311/712 (43.68%), Query Frame = 2
Query: 605 SKSLNVEILDINDNAPSWPQQSKVVSFT-----EFEGN----KLESRTIHIDKAFDPDVN-ENSQIDY-FLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGS-------LELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEY-FNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDR------------------NDNSPKF-TRVFHFRVLENASVP----NMFVGEVMAVDKD--AERNSKIEFQIIGNE----EHFFQID-SSGKMYTKQVLDRE--ETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKES-YFQYSSSLPFQMIRHDRGEIVTKYLLDRE---KQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQI-EEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACD 2563
+K+ VE+ D+ND P Q V FT E N K + I KA D D + +++ Y + + NG+ + D T E+ P + DRE++D+Y L + A D G+ +++ I I D NDN P F+ KY ++ E+ G +T+ A D D +N + Y + F + ++G I V++ +D++A + + ++A DG R V I + D ND P+ + +IE +V VL ++ D D +D S + RLE +D+ F+I + ++E V L +D S + V Q +D NDNSP F R+F + +E P ++ +V A D D N+ IE+ I+ N+ E F+ID ++GK++ + LDRE +F + + A D G P + G VTI+V D+ND P F + YE S+ E A IG +V + +A D A+ + K + + + S+ES YF ++ + + G + K LD E ++ + L + D H + V + ++D ND+ P + T ++ G IG A D D G+ + ++I + +P F+ + Q+ L + L ++D + L+I A D
Sbjct: 1194 TKTFVVEVRDVNDVVP----QFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETK---HFRIDELTG---EIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIG-RVKESEGEGHDVITIKAHDLDKHSN--LRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQ-YHLVLIASDG-----RHNATTNVYIHIEDVNDNAPQF-------EQQKYATTVIEEDVDIPKVLFNVHATDAD---QDEKSSRIV----YRLEGQG-ADEVFRI------GKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGY--IEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFD----ADEEAKDNVFTYQLSEESDYFYVTTDKDSK--QSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRH----DAEAAVHVALVDRNDHAPHIHGA--TEHRVREDVPRGTSIGRYTATDRDAGDTAR--FRINRQSDPKRQFTID-QDGTLRVAHTLDREDIAVYNLIIEAYD 1848 HSP 5 Score: 92.0485 bits (227), Expect = 2.348e-18 Identity = 179/768 (23.31%), Postives = 307/768 (39.97%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRID-RESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELI-IQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEE--------YRKTGECEV------------VIMVIDENDEKPEI--------IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIAN---FDREEKSMEKVDILCKDQAYNTASKSIVF--QILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI----IGNEEH-----FFQI--DSSGKMYTKQVLDREETEKFNVTILAKDGGDPPK-TGTGLVTIEVVDINDWKPEFSLS---LYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRF---SKESYFQYSSSLPFQMIRHDRG----EIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV----------GYEIGTVEAVDLDF-GENSEIVYQI---EEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDK 2566
IDP T ++ + +D + P + R S+V L + I D+NDN P++ ++ + + + ++TI A D D +NS+I Y DN + I + S ++ L ++ +R VY + A D+G P S +I I+ + ND +F Y ++E+A G + + A+DAD ++TY D+ G + M +ID G+ + V A D A E + G C V +I + D N+ KPE I + + T+ P I++ E + A+ DIV + R V D++ +L + FDRE + E V + D+ F +++D NDNSP+F R + + V V A D DA N++I + + EEH FF++ SG++ + + +T+KF ++A D G P + VT+ V+D P++ S ++ EN + + A+ N+ + Y++ + ES F+ Q + + G E+V LD E+ ++Y LT+ A D + ST T + + DVND P F +F+ E + G I TV+A+D D G +E+ Y+I G +F + ++ N ++ D + L + A D+
Sbjct: 585 FRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNRESHVD--LTIRIDDVNDNVPTF---TRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITY-------SVDNHNFSINSNGEISAKVRLDADQLNERHF--VYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDAD---RDEVTYSFMDKN-------GRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSAN----------GDIVYSLYYTQSESRKAFV--IDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPM-KTQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFR-------QFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATD--MTSRVASTKTFVVEVRDVNDVVPQFTVD---LFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDR 1303 HSP 6 Score: 81.6481 bits (200), Expect = 3.851e-15 Identity = 126/477 (26.42%), Postives = 202/477 (42.35%), Query Frame = 2
Query: 620 VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNE-NSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDRE---QVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIF-DRAKYYANKLSENANI-GFVALTVSAKDAD--YLANGKITYRIEDQK---ASEYFNIG-NNGNIMVRKNIDYD-AGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVL-AHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKD---------QAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVP-NMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPE 1975
+ I D+NDNAP + QQ + E E + ++ A D D +E +S+I Y L+ G+ + V++I S T IEL +K +DR+ V + ++ A D+ G ++ + + D NDN PIF +R Y + E + G + V A+D D N I Y I K F I N G I +++D + + + F V A D G P + G V I V D ND P T+ + E A I V+S S A E KD ++ + LS K+ + + R ++ ++ D+ +D + A ++ ++DRND++P RV E+ VP +G A D+DA ++ + + F ID G + LDRE+ +N+ I A D + G +V + + D+ND PE
Sbjct: 1424 IHIEDVNDNAPQFEQQKYATTVIE-EDVDIPKVLFNV-HATDADQDEKSSRIVYRLE---GQGADEVFRIGKYSGT---IEL--VKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPS---REGFANVTIKVTDMNDNAP--FFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKD------NVFTYQLSEESDYFYVTTDKDSKQSSVGVL----RVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVRED--VPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYDNSN--NIGRQMVAVYLQDVNDNGPE 1871
BLAST of Protocadherin 1b vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 144.05 bits (362), Expect = 3.057e-34 Identity = 187/737 (25.37%), Postives = 319/737 (43.28%), Query Frame = 2
Query: 443 SYRIFDGN----KLLNCLHIDPETHVVTVKNRIDRESLCP--NQINCDIMLR------FFISPSYVS-KSLNVEILDINDNAPSWPQQSKVVSFTE-FEGN-KLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELM----------PIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIE-DQKASE-------YFNIGN--NGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIV-----SCSLSNNDKMRLEQVSP---SDKEFQILAIANFDREEKSMEKVDILCKDQAYNTAS-KSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGE--------VMAVDKDAER-NSKIEFQII----GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKD-------GGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGE-NSEIVYQIE 2452
+Y D N + +N ID T +V +++ + L N IN ++++ + S ++ S +L + I D+N+N P +P +K + EG K + TI +A D D + N I V+ + Y S SR+ ++ P V DRE ++ + A D G G + ++++D NDN P F+R Y +S +G +TV A D D N +ITY +E D A E +F + N +G I + K I + F F+V+A D G PE + + +V + V+D+ + P+ + +T + EN ++ +L V D D++ S N + + Q + ++ +++ + D E+ + + + D AS K+ V ++ D ND P+FT ++ PN + + V A+D D++ +++ ++I+ G E F+ID +G+++ + DRE+ + + +T+ A D G + P V I + D+ND P F Y + E+ G G V T+ A DL ++ ++Y +I +PF +R D G I K LD E Y L ++A D H +TT V I+I DVNDN P F+ I+ + + V A D D E +S IVY++E
Sbjct: 781 TYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDI--------------VYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPS-YETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMK--TQKFIFNVIADDNGIPEALQSS--AQVTLNVLDKQQKAPKWQTSPDCKPGIT----VDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKA--HDLDKHSNLRYHLIG---------AGGGRIPFG-VRTDSGTIFVKEPLDFEASDQYHLVLIASDGRH----NATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLE 1478 HSP 2 Score: 132.88 bits (333), Expect = 8.117e-31 Identity = 165/595 (27.73%), Postives = 258/595 (43.36%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADY-LANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYD--AGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKP----EIIVHVTK-RDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKM-RLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASK----SIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQI--------DSSGKMYTKQVLDREET---EKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP 2323
+ + I D+NDNAPS+ +Q + E EG + TI KA D D + N + + + G+ GV + DS T + + +D E D Y L+LIA D + + + I I D NDN P F++ KY + E+ +I V V A DAD + +I YR+E Q A E F IG +G I + K +D D AGV + F V AID + G +V + V D ND P + ++ + R+P+ ++ + + E + ++G IV L N + + R++Q +I A+ + DRE S + I + S+ ++ ++ D NDN+P F + + +E + V A D D E + + E +F + S G + KQ LD E+ + F++ I DG + V + +VD ND P E + E+ GTS+G TA DRD A ++RI K + I D G + + LDRE + Y L + A DN ++ V + + DVNDN P
Sbjct: 1321 VQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITI---KAHDLDKHSNLRY-HLIGAGGGRIPFGV---RTDSGT-----IFVKEPLDFEASDQYHLVLIASDG---RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDD--DGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYG---IVRNKLINGESVFRIDQ-----NTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAA---VHVALVDRNDHAPHIH-GATEHRVREDVPRGTSIGRYTATDRD--AGDTARFRINRQSDPKRQF----------TIDQD-GTLRVAHTLDREDIAVYNLIIEAYDN---SNNIGRQMVAVYLQDVNDNGP 1870 HSP 3 Score: 125.561 bits (314), Expect = 1.263e-28 Identity = 146/548 (26.64%), Postives = 242/548 (44.16%), Query Frame = 2
Query: 923 EDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKG---FQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNND-----KMRLEQVSPSDKEFQI---LAIANFDREEKSMEKVDILCKDQA-------YNTASKSIVFQILDRNDNSPKFTRVFHF----RVLENA--SVPNMFVGEVMAVDKDAERNSKIEFQII---GNEEHFFQIDSSGKMYTKQ---VLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLP-FQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYE--IGTVEAVDLDFGENSEIVYQI-EEGNP 2464
EDN R ++L I+I D NDN P F R Y A ++ E+ + L V+A D D N +ITY +++ F+I +NG I + +D D + ++F+V A D E + + I + NDE + P + A + + + + I+ +D D RD V+ S + + KM L + ++ ++ A+ E + I+ D + +T+ +++ I D N+N P+F + +++E + P V +V A D D+ N I + + F ID + T V DRE + +VT+ A D GD P G ++EVVDIND P+F YE S+S +GTSV TV A D D N ++ Y + D + E ++ + L F+++ GEI + + Q ++ V+A DNG P + S+ V +N++D P ++TS I E+V I AV NS+++Y++ G P
Sbjct: 619 EDN----RESHVDLTIRIDDVNDNVPTFTRPLYTA-QVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHN----FSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHG-EPVSLSSSAMIHIRTENTNDESAVFL-------PTSQYTAFVAEDAQGGTPVIQIQARDAD---RDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIV-KVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGE---EHQNDLDFFELVNRRSGEITLIKPIPMKTQK-FIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGP 1141 HSP 4 Score: 113.235 bits (282), Expect = 8.961e-25 Identity = 185/712 (25.98%), Postives = 311/712 (43.68%), Query Frame = 2
Query: 605 SKSLNVEILDINDNAPSWPQQSKVVSFT-----EFEGN----KLESRTIHIDKAFDPDVN-ENSQIDY-FLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGS-------LELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEY-FNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDR------------------NDNSPKF-TRVFHFRVLENASVP----NMFVGEVMAVDKD--AERNSKIEFQIIGNE----EHFFQID-SSGKMYTKQVLDRE--ETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKES-YFQYSSSLPFQMIRHDRGEIVTKYLLDRE---KQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQI-EEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACD 2563
+K+ VE+ D+ND P Q V FT E N K + I KA D D + +++ Y + + NG+ + D T E+ P + DRE++D+Y L + A D G+ +++ I I D NDN P F+ KY ++ E+ G +T+ A D D +N + Y + F + ++G I V++ +D++A + + ++A DG R V I + D ND P+ + +IE +V VL ++ D D +D S + RLE +D+ F+I + ++E V L +D S + V Q +D NDNSP F R+F + +E P ++ +V A D D N+ IE+ I+ N+ E F+ID ++GK++ + LDRE +F + + A D G P + G VTI+V D+ND P F + YE S+ E A IG +V + +A D A+ + K + + + S+ES YF ++ + + G + K LD E ++ + L + D H + V + ++D ND+ P + T ++ G IG A D D G+ + ++I + +P F+ + Q+ L + L ++D + L+I A D
Sbjct: 1194 TKTFVVEVRDVNDVVP----QFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETK---HFRIDELTG---EIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIG-RVKESEGEGHDVITIKAHDLDKHSN--LRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQ-YHLVLIASDG-----RHNATTNVYIHIEDVNDNAPQF-------EQQKYATTVIEEDVDIPKVLFNVHATDAD---QDEKSSRIV----YRLEGQG-ADEVFRI------GKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGY--IEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFD----ADEEAKDNVFTYQLSEESDYFYVTTDKDSK--QSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRH----DAEAAVHVALVDRNDHAPHIHGA--TEHRVREDVPRGTSIGRYTATDRDAGDTAR--FRINRQSDPKRQFTID-QDGTLRVAHTLDREDIAVYNLIIEAYD 1848 HSP 5 Score: 92.0485 bits (227), Expect = 2.348e-18 Identity = 179/768 (23.31%), Postives = 307/768 (39.97%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRID-RESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELI-IQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEE--------YRKTGECEV------------VIMVIDENDEKPEI--------IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIAN---FDREEKSMEKVDILCKDQAYNTASKSIVF--QILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI----IGNEEH-----FFQI--DSSGKMYTKQVLDREETEKFNVTILAKDGGDPPK-TGTGLVTIEVVDINDWKPEFSLS---LYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRF---SKESYFQYSSSLPFQMIRHDRG----EIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV----------GYEIGTVEAVDLDF-GENSEIVYQI---EEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDK 2566
IDP T ++ + +D + P + R S+V L + I D+NDN P++ ++ + + + ++TI A D D +NS+I Y DN + I + S ++ L ++ +R VY + A D+G P S +I I+ + ND +F Y ++E+A G + + A+DAD ++TY D+ G + M +ID G+ + V A D A E + G C V +I + D N+ KPE I + + T+ P I++ E + A+ DIV + R V D++ +L + FDRE + E V + D+ F +++D NDNSP+F R + + V V A D DA N++I + + EEH FF++ SG++ + + +T+KF ++A D G P + VT+ V+D P++ S ++ EN + + A+ N+ + Y++ + ES F+ Q + + G E+V LD E+ ++Y LT+ A D + ST T + + DVND P F +F+ E + G I TV+A+D D G +E+ Y+I G +F + ++ N ++ D + L + A D+
Sbjct: 585 FRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNRESHVD--LTIRIDDVNDNVPTF---TRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITY-------SVDNHNFSINSNGEISAKVRLDADQLNERHF--VYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDAD---RDEVTYSFMDKN-------GRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSAN----------GDIVYSLYYTQSESRKAFV--IDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPM-KTQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFR-------QFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATD--MTSRVASTKTFVVEVRDVNDVVPQFTVD---LFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDR 1303 HSP 6 Score: 81.6481 bits (200), Expect = 3.851e-15 Identity = 126/477 (26.42%), Postives = 202/477 (42.35%), Query Frame = 2
Query: 620 VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNE-NSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDRE---QVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIF-DRAKYYANKLSENANI-GFVALTVSAKDAD--YLANGKITYRIEDQK---ASEYFNIG-NNGNIMVRKNIDYD-AGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVL-AHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKD---------QAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVP-NMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPE 1975
+ I D+NDNAP + QQ + E E + ++ A D D +E +S+I Y L+ G+ + V++I S T IEL +K +DR+ V + ++ A D+ G ++ + + D NDN PIF +R Y + E + G + V A+D D N I Y I K F I N G I +++D + + + F V A D G P + G V I V D ND P T+ + E A I V+S S A E KD ++ + LS K+ + + R ++ ++ D+ +D + A ++ ++DRND++P RV E+ VP +G A D+DA ++ + + F ID G + LDRE+ +N+ I A D + G +V + + D+ND PE
Sbjct: 1424 IHIEDVNDNAPQFEQQKYATTVIE-EDVDIPKVLFNV-HATDADQDEKSSRIVYRLE---GQGADEVFRIGKYSGT---IEL--VKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPS---REGFANVTIKVTDMNDNAP--FFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKD------NVFTYQLSEESDYFYVTTDKDSKQSSVGVL----RVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVRED--VPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYDNSN--NIGRQMVAVYLQDVNDNGPE 1871
BLAST of Protocadherin 1b vs. Ensembl Fly
Match: ft (gene:FBgn0001075 transcript:FBtr0077478) HSP 1 Score: 236.113 bits (601), Expect = 1.350e-62 Identity = 212/726 (29.20%), Postives = 345/726 (47.52%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYD--SSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQK-------ASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFG--GRDIVSCSLSNN-DKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQA--YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQM-IRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSN------KTVFSIQTTESVGYE--IGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILN----SVLSKQDDHKLVISACDKGK 2572
+DP T V +DRE + + + D+++ P+Y + + +++LD+NDN+P +P+ S +SF+E + + +D A D DV EN D + + G DN + S + + L +DRE Y+L + A D GSP R G L++ + ILD NDN PIFD + Y + L+E A G +TV A D D N KITY + + + + + N + N+ A K F+V A D G+P R+ G V + ++D ND P I P + A ++ ++ +V+A + VKD D G GR V N RLE+ + + I+ + DREE + ++ DQ T + ++ + D ND+ P F + + VL + FV + A D+D N+++ + I+ GNE +F +D +G + T LDRE + ++I A+DGG PK + + ++D ND P+FS ++ E+A T V +TA D D N + + + S E + P Q + G++ T+ LDREK S Y ++V+A D G P ++T TV +N+ DVNDN P F + I+ + V E + V A D D G+N+ I Y++E G G F + ++ + L + + + +KL++SA D G+
Sbjct: 105 LDPVTGEVKTNVVLDREGM---RDHYDLVV-LSSQPTYPIE-VRIKVLDVNDNSPEFPEPSIAISFSE---SATSGTRLLLDAATDADVGENGVTDQY-EIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVS-LNETALPGTPVVTVMASDNDLGDNSKITYYLAETEHQFTVNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSP---RQDGRTYVTVNLLDTNDHDPIISFRFF---PDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAA----DLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAP---SVERLY------PLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGE-GLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAGQ 800 HSP 2 Score: 194.512 bits (493), Expect = 1.555e-49 Identity = 215/761 (28.25%), Postives = 344/761 (45.20%), Query Frame = 2
Query: 476 NCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNV--EILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNG-------------------SPKR-----------------TGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITY-----RIEDQKASEYFNIGNN---GNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEK---SMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNM-FVGEVMAVDKDAE-RNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQ----NKKLILNSVLSKQDD--HKLVISACDKGK 2572
+ ++P+T ++T+ R+D E + + + PS +S ++ V +LD+NDNAP + S S FE + + + + A D D N I+Y + + ++ G+ DS+ + R + +DRE Y L + A D SP++ + ++++ I I D ND P+F A A + EN I V + V A D D NG I Y R ED S+ N G + V +D + + ++ A D G P + + E +++I ++DEND P DP ++ EN I VL + D D G + S+ D+ +S ++ N++R + ++ D ++ A +TA +I ILD NDN P F + RV+EN PN +V V A D D NS++ + + + F+I+ SSG + + LDRE+ ++ +T++A D G PP TGTG+V +EV DIND P F L Y ++ EN GT V T A D+D N K+++ ++ + + F I + GEI T LDRE+ S Y LT++A D+ S+ + I++ DVNDN P F + T +++ E + G + A+DLD GEN+ + Y I G YF NT+ + KL L + DD + +VISA D+G+
Sbjct: 1968 DVFSLNPQTGMLTLTARLDYEEV--QHYILIVQAQDNGQPS-LSTTITVYCNVLDLNDNAPIFDPMS--YSSEVFENVPIATEVVTV-SAKDIDSGNNGLIEYSITAGDVDSEFGI-----DSNGTIRTR----RNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANETA--IMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDREL-RSSYLLNITARDRGEPPQ---STESQLLIRILDENDNSPVF-------DPKQYSASVAENASIGAMVL-QVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTI--NILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHR---FH---------IDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKF---DSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHYTI-SGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGE 2681 HSP 3 Score: 189.119 bits (479), Expect = 6.502e-48 Identity = 199/726 (27.41%), Postives = 333/726 (45.87%), Query Frame = 2
Query: 344 TCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSL-NVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGV-WKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSP-KRTGSLELIIQIL--DKNDNGPIF--DRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVL---AHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIA-NFDRE----EKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLDFGENSEIVYQIEEGN 2461
+ ++ + E GTE+ + V+ + I GN+ + HID T + + +D E + +N I +PS + L NV ++D NDN P +P + V E G L++ + + A DPD N ++ Y + + + G + I ++ + ++ IDRE +D + L ++A D P +R S E ++ ++ D NDN P+F A K S + + V AKDAD +NG +TY I E F + N G I + V+ +Q ++ + D A + R++ E + I+ + + +R L+ ++ ENE I S+L AH+ + ++ V+ + + +++++ D + IL+ A DRE E +E I Q + +K + +LD+ND+ P+F F + V E+ + + + + A D D + F ++ G++ F S+GK+ LDRE K+ + I DG + TI+V D ND P F ++Y F I ENA G VG + A D DL N ++ Y ++SD ++ + + SL Q G + LD E+ HY+L V A DNG P S ++T TV N++D+NDN P F + +S + E+V E+ TV A D+D G N I Y I G+
Sbjct: 1387 SSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRR-DTFHIDSITGSLYLHKPLDYEDITSYTLN--ITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKE--GIPLKTPIVTV-TADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGV-----IHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIV-SGPQELFKLQRNTGIITFTPGPQFKQEVR-YQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSV-PQFEQRSKLSG--SVYENEPIGTSILTVTAHLASAEIEY----FVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTK-VRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHT-ISTLRAHDPDTL--GSVTFLLMDGHDGKFLLEPSTGKLILNDTLDRETKSKYELRIRVSDG---VQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSD-WANDVF-----SLNPQT-----GMLTLTARLDYEEVQHYILIVQAQDNGQP-SLSTTITVYCNVLDLNDNAPIF---DPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGD 2070 HSP 4 Score: 174.481 bits (441), Expect = 1.939e-43 Identity = 183/641 (28.55%), Postives = 293/641 (45.71%), Query Frame = 2
Query: 602 VSKSLNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRN----GKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGE-CEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNS----VLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPN-MFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGG-DPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSH----YLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEG 2458
+S ++ V IL D+ND P + ++ E + + I + KA D D N IDY +K+ G++D + + +L + +DRE Y L + A D G P ++ +L+I+ILD+NDN P+FD K Y+ ++ENA+IG + L VSA D D ANG+I Y I + F+I + G + V KN++Y+ + + +V A D A E G+ E+ I ++D ND +P + P ++EN V N + + P + ++D R+ S I + DRE++S + ++ D T + + ++ D NDN P F + +H V EN +P+ V A DKD N+K+ F ++G H F IDS +G++ T LDREET +++T++A+D P+ + +TI V D+ND P+F + Y ++ E G V A+D D N + Y IS R + YF I G + TK L + +SH Y + + A+D G S +S + + I+ + FPTF + F++ G I V A G +I Y I G
Sbjct: 2147 LSSTVKVTILIKDVNDEVPVFISANETAIM---ENVAINTVVIAV-KAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDG-----QLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFD-PKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYER-LSRYSLTVRAEDCALEN--PAGDTAELTINILDINDNRPTFL-----DSPYLAR--VMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLFRINASS-----GDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVREN--LPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHY-TISGR--DQHYFD---------INTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGE-QSLSSKAELTV-ILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGG 2746 HSP 5 Score: 169.088 bits (427), Expect = 9.016e-42 Identity = 186/703 (26.46%), Postives = 304/703 (43.24%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNG-SPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKG-----FQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNN---DKMRLEQVSPSDKEFQILAIA--NFDREEKSMEKVDILCKDQAYNT--ASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDF-GENSEIVYQIEEGNPYGYFSFNTQNKKLILNS---------VLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPP 2650
+ VE+ DINDN P + QS + E N + +A D D N+++ + L + + + DS T E+ +DRE+ VY L L+A+D+ + R S+ L I + D NDN P FD Y + E + G A D D N + Y I + YF+I N +V ++ K + + A+D + E V++ PE+ + N + +V ++ + P G + +++ D +R+ D +L++ D E + ++ I D + + I + D NDN+P + +++ VLE S P + + V A D+D+ N + +++ + + F+I SG++YT+ LDREE + + A D G P TGT V + ++D ND P+F+ L+ +++ENA IG+ V VT+ D DL AN Y FS+ ++ I G I LDRE+Q Y+L VVA D ++ + T + I I D NDN P F+ S + + +S+ +G + A D D G NS I Y +++ +P FS + ++ V S ++ + L + A D GKPP S L V I +V H N PP
Sbjct: 2477 VRVEVQDINDNDPVFELQSYHATVRE---NLPSGTHVLTPRATDKDEGLNAKLRFNLLGEH------MHRFHIDSETG---EISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNV-AVPERISKGEFVFGARALDLDDGENAVVHYTISG-RDQHYFDI-NTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTVIL-------RPPELFPTFAY---MANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGGIMGDSLRV------DPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEESPPQL-IAVVKASDRDSGDNGNVIYRLQNDFDGTFEITESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFT-RLFSLNVTENAEIGSFVIRVTSSDLDLGANANASY-----SFSENPGEKF-------RIEPQSGNITVAGHLDREQQDEYILKVVASD----GAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIAL-VGQIIATDRDKQGPNSVISYSLQQPSP--MFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECL-VNINIVDAH----NNPP 3122 HSP 6 Score: 165.622 bits (418), Expect = 1.217e-40 Identity = 202/744 (27.15%), Postives = 320/744 (43.01%), Query Frame = 2
Query: 488 IDPETHVVTVKN-----RIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSW---PQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNE-NSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNND---------------KMRLEQVSPSDKEFQ-ILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVF--HFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN-EEHFFQID-SSGKMYTKQ-VLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGT----VEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSK--QDDHKLVISACDKGKPPKCSNPLWVTIK 2611
I +T VV V R+ R SL +C + +P+ + L + ILDINDN P++ P ++V+ T N T++ A+D D NSQ+ YFLK+ D+ +++I S ++ +K +DREQ Y L L+A D GSP TG+ + +++ D NDN P+F+ Y+A + EN G LT A D D N K+ + + + + G I +D + + +++A D + E R + + I V D ND P K D T A+ E + + D D G +V ++S D K+ L+ + S + + I+ D+ E+S+ +SK+ + IL + P F + HF + E+ P + +V A KI + I G ++D +SG + Q LD E T + + I A DG P L+T+ V D ND P +Y + E + V A DRD N + YR+ +D + F+ + S GEI T+ LDRE+ Y V A+D G P+ T T +V ++++D NDN P F +FS+ TE+ EIG+ V + DLD G N+ Y E NP F Q+ + + L + QD++ L + A D + P+ +TI+
Sbjct: 2328 ISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALE-----NPAGDTAELTINILDINDNRPTFLDSPYLARVMENT-VPPNGGYVLTVN---AYDADTPPLNSQVRYFLKE----GDSDLFRINASSG-----DIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHAT-VRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHIDSETGEISTATTLDREE-TSVYHLTLMAQDSSITEPRAS-SVNLTISVSDVNDNIP-------KFDSTTYNVAVPE-RISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSL--------------SSKAELTVILRPPELFPTFAYMANSHFAMSEDVR-PGKMITKVSATSPKKGLVGKIRYAIAGGIMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDF---DGTFEITES----------GEIYTRMRLDREEIGDYAFVVEAVDQGVPH-MTGTASVLLHLLDKNDNPPKF----TRLFSLNVTENA--EIGSFVIRVTSSDLDLGANANASYSFSE-NPGEKFRIEPQSGNITVAGHLDREQQDEYILKVVASDGAW--RAETPITITIQ 3004 HSP 7 Score: 163.696 bits (413), Expect = 3.967e-40 Identity = 178/649 (27.43%), Postives = 279/649 (42.99%), Query Frame = 2
Query: 626 ILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVK--------GFQFSV--------------LAIDGAPEEYRKTGECEVVIMVIDENDEKPEII---VHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN---TASKSIVFQILDRNDNSPKFTRVF-HFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-IGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINII--DVNDNFPTFKTSNKTVFSIQTTESVGYEIGT--VEAVDLDFGENSEIVYQIEEG 2458
I D+ND+ P + S S E K+ +R + A D D+ +N +I Y + + N + GV+ Y L +DRE+ D Y L + D G P R+ + ++I ++D+NDN P F + + + + ENA ++A D D N ++++ + Q ++ F I NG I + D +A VK G S+ ++ +G P R + +V ++V D ND PE + HVT I + + H+ +D D G V SL+ ++ Q + Q+ DRE + + + ++ KD A +++ SI +LD NDN+P+FT+ VLE + + A D D NS++ F I GN F IDS +G +Y + LD E+ + + I A D G P + T L + VVD ND P F + I E + T + TVTA D D N K+ Y I + + +F I + G I T +DRE + LTVVA D P+ +T + +I D+NDN P F + N + + + S G V A D D N + Y+I G
Sbjct: 1039 IADVNDHTPVFDHTSYETSLPET--TKVNTRFFAL-AATDIDLGDNGRISYEIIEGNTERMFGVFPDGY---------LFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFS-IPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQ--TQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIP---RLQDKVKVKVIVTDVNDNAPEFLRAPYHVT-----------ISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEA--GQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELM-RFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFG---------INTETGVIHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSG 1646 HSP 8 Score: 162.54 bits (410), Expect = 9.279e-40 Identity = 188/722 (26.04%), Postives = 327/722 (45.29%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSY--VSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGN-KLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQV----DVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII--GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGH-PNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDF-GENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSN 2590
I+P++ +TV +DRE + +L+ S + + I D NDNAP + SF E + + L + I D+ NS I Y L+ + D +T ++ + V ++Y L ++A DNG P + I I+D ++N P F++A+Y A L ++A G + V A D L ++ Y + S F++G ++G I + K I + ++ V A D G P + + E VVI+V EN + P V+ + + + ENE + +++L + D D G ++ S+S ++ + S ++ I+ D + ++I +D Y+ S + I+ D NDN P F + +H + EN V FV + A DKD+ +N+ I + + G + HFF ++ S+G + + D EE + + I AK+ ++ L + V+ +N++ P+F ++ F +SE + +GT VG V A D+D + ++ Y ++ K ++ L + + RH LDRE Q+ +LTV+A + G + T V I+I D ND P F T +I VG ++ TV+A+D D +N++ Y I GN F + Q ++ S L +++ + LVI A D G PP+ +
Sbjct: 2959 FRIEPQSGNITVAGHLDREQ------QDEYILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRD---KQGPNSVISYSLQQPS-------PMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLA-PLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTR-YELVVRATDRGVPPQ---SDETRVVIVVTGENMDTPRFSVN-------SYQVIVPENEPVGSTILT-VGATDDDTGPNGMLRYSISGGNER--QDFSVDERTGGIVIQQQLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPV-GTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSMESYANLY-VHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIY-VARH----------LDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGNDP-PEFIKHYYTS-TISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGS 3634 HSP 9 Score: 156.762 bits (395), Expect = 5.657e-38 Identity = 196/744 (26.34%), Postives = 308/744 (41.40%), Query Frame = 2
Query: 473 LNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSS-TSRRIELMPIKVIDREQVDV-YELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANK---LSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMV--RKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQA--YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHD--RGEIVTKYLLD-------REKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVD-LDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLS--KQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIP 2638
++ HID ET ++ +DRE + P S +L + + D+NDN P + + V+ E + + +A D D EN+ + Y + R D + I + S ++EL K + D+ Y +++ A D G + EL + IL + P F Y AN +SE+ G + VSA GKI Y I + + N ++ + +DY+ ++ + A DG R + + V D ND P + + L ++E E ++A ++ D D G V L N+ E + +I DREE + DQ + T + S++ +LD+NDN PKFTR+F V ENA + FV V + D D N+ + N F+I+ SG + LDRE+ +++ + ++A DG +T +TI + D ND PEF S Y FS E VG + A DR D+ S YS P M D GE+ +K + R ++ Y LTV+A DNG P Y S V INI+D ++N P F+ + + + + G I V A D D G N E+ Y + N FS + + L + ++LV+ A D+G PP+ S+ V I V +++ P
Sbjct: 2535 MHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPE---RISKGEFVFGARALDLDDGENAVVHYTISGR----DQHYFDINTKTGVVSTKLEL---KTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTV-ILRPPELFPTF---AYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGGIMGDSLRVDPNSGLLSVGQDGLDYEL-THLYEIWIEAADGDTPSLRSV--TLITLNVTDANDNAPVM-------EQLIYNAEVLEEES-PPQLIAVVKASDRDSGDNGNVIYRLQNDFDGTFEIT----ESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRLFSLNVTENAEI-GSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDEYILKVVASDGAWRAETP---ITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDR--------------DKQGPNSVISYSLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLY-SECLVNINIVDAHNNPPKFEQA-EYLAPLPQDAVRGQRIVRVHANDKQDLGTN-EMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQ-SDETRVVIVVTGENMDTP 3227 HSP 10 Score: 154.836 bits (390), Expect = 2.256e-37 Identity = 189/761 (24.84%), Postives = 328/761 (43.10%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFT----------EFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKND-----------NGPIFDRAKYYANKLSENAN--IGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKT----GECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAII--ENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDR----EEKSMEKVDILCKDQAYNTASKSIVFQ--ILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDR--FSKESYFQYSSSL-PF------QMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSK--QDDHKLVISACDKGKPPKCSNPLWVTIKVVKQH 2626
+D T +T + +DRE + +I+ + +P + ++ + + D+NDN P + + + S E E ++ +H+ A D D +N+ I+Y L+ G++++ + S I L Y+L++ A D G +R + I++I+ K+ G F + + + + N +G V + K + AN I Y I ++ F I +G I + +D + ++ ++LA + + G+C V I +ID ND P V R+ +EP I EN + + V+D D G +S SL+NN + ++ P + + R E S+ V+++ D S + I D ND++P F + L + N + A D D N +I ++II GN E F + G ++ + LDREE + + +T+ +D G P ++ V I V+D ND P+F+ S + FSI ENA T VG +TA+DRD+ N ++ + + S F+ ++ + +L PF ++ R+ L ++ LL DNG P VK+ + DVNDN P F + V +I S G I V D D G N ++ Y + +GN G F+ ++ +L L L + Q+ H L++ A D S+ +TI V+ ++
Sbjct: 652 LDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERI---LLHV-TASDKDDGDNALIEYRLESGG----EGLFQLD---ARSGAISLRGDAPASMHWKPHYKLLVSARDAG--QRRSQQDAIVEIVLKSKLEMLECGQAQAGGYEFQMVEDHEQQRNSQPNREVGIVQV----KSTNGKANSHIEYDIIQGDRAQNFRIDTRSGRITTARPLDREEQAN-YRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAP---VFALDRE---SEPTISLPENAAVGQEIYLS-RVRDRDAGVNSRISYSLTNNPNQQF-RIGP------VTGVLYLQRPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFPDGYLFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPR-LQDKVKVKVIVTDVNDNAPEFLRAPYHV-TISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDEN 1378 HSP 11 Score: 152.14 bits (383), Expect = 1.471e-36 Identity = 200/767 (26.08%), Postives = 333/767 (43.42%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVS--KSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNG-----PIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKAS-------EYFNI-GNNGNIMVRKNIDYDAGVKGFQFSV--LAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAI--IENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEH-FFQIDSSGKMYTKQV-LDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNG-------------------HPNSYTST--------------TTVKINII--DVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEG--------NPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCS 2587
I+ ET V+ IDRES+ ++ R S +S K + V + DINDNAP + + + +F +K S + A D D + N + Y + +G + ++K++ ++ I P +E Y+L L + D S E+ I I+ G P F++ + + EN IG LTV+A +LA+ +I Y + + A+ F+I G + +D +AG + ++ V +A+ G P +T +V + V+D+ND P+ + + P + + ++ ++ + DPD G ++ K LE PS +++ DRE KS ++ I D T + + + Q+ D NDN P F V+ F + ENA VG+++A D D +N+++ + ++ + + F ++ M T LD EE + + + + A+D G P + T V V+D+ND P F Y + EN I T V TV+A D D N ++Y I + E F S+ G I T+ LDRE +S Y LTV A D P Y T +TVK+ I+ DVND P F ++N+T +I ++ + V+AVD D G N I Y ++E +P FS N + +L + L ++ + L I+A D+G+PP+ +
Sbjct: 1543 INTETGVIHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIV--SGPQE--LFKLQRNTGI---ITFTPGPQFKQEVR--YQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTA----HLASAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQP----RTSRTKVRVTVLDKNDSPPQFL----------DTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHDGKFLLE---PSTG--KLILNDTLDRETKSKYELRIRVSDGVQYTEAYATI-QVSDTNDNPPLFEDTVYSFDIPENAQR-GYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSE--FGIDSN----------GTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANET--AIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLP-FSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQST 2260 HSP 12 Score: 147.517 bits (371), Expect = 3.536e-35 Identity = 197/778 (25.32%), Postives = 338/778 (43.44%), Query Frame = 2
Query: 368 EEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNC-LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKS-LNVEILDINDNAPSWPQQ--SKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEY---FNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIV-HVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQI-----LDRNDNSPKFTRVFHFRVLENA-----SVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKT------GTGLVTIEVVDINDWKPEFSL---SLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQM-IRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF-KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNP---YGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCS 2587
E NGT + + ++ ++ TS RI GN+L + L + H+V V +DRE + + N ++ +P+ + + L +++ D+ND+ P + + S V+S G+ + S T A D D N+Q+ Y + N ++K+ S ++ +DRE D EL + A D G + +L + ILD+ND P F + + L E+A + ++A D D NG +T+ + Y F + G + R+ +D + + ++ SV+A D GAP T V + V D ND P+ H ++ ++ EV +L H+ D D G ++ L + + L Q+ + A K K+ + +D + + + +I L+ + + F+++E+ S PN VG V + + NS IE+ II G+ F+ID+ SG++ T + LDREE + +TILA G +V I ++D+ND P F+L S S+ ENA +G + DRD N+++ Y + ++ + + L Q IR + G ++ L+ A D G +S ++ + I DVND+ P F TS +T S+ T V + A D+D G+N I Y+I EGN +G F + L + + L ++ D + L +S D G+P + S
Sbjct: 398 ENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIVRVNGVLDREEI--GKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASIT-----ATDEDTGVNAQVHYDILSGN--------ELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVT-LGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREK-MSQYEISVIARDQGAPTPQSAT--ATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGE-GLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEIVLKSKLEMLECGQAQAGGYEFQMVEDHEQQRNSQPNREVGIVQVKSTNGKANSHIEYDIIQGDRAQNFRIDTRSGRITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNPNQQFRIGPVTGVLYLQRPIRAEPGSLIHVELM-------------ATDAGS-PPLSSKLSLSVLIADVNDHTPVFDHTSYET--SLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFP----DGYLFVRAPLDREERDYYALTVSCRDAGQPSRSS 1135 HSP 13 Score: 141.354 bits (355), Expect = 2.753e-33 Identity = 176/710 (24.79%), Postives = 309/710 (43.52%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCD-----------IMLRFFISPSYVSKS-LNVEILDINDNAP-----SWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNN-DKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNT---ASKSIVFQILDRNDNSPKF-TRVFHFRV--------LENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEK--FNVTILAKDGGDPPKTGTGLVTI------EVVDINDWKPEFSLSLYEFSISE------NAGIGTSVGTVTAIDRDLPANTKMKYRII-SDRFSKESYFQYSSSLPFQMIRHD--RGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTT-----VKINIIDVNDNFPTFKTSNKT--VFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQI 2449
++PET V++ R++ CP Q N + R SP ++ + V +LD ND+ P +P KV + E N + + D D N + + + N + + + + I + V+DRE++ Y L ++A D G+P RT + LII + D ND+ P+F++++Y A LSE A G +++A D D N ++ Y I ++F++ G I+ +D + + S+ A DG P K ++ ++++DENDE P+ ++R+ + + + +++A + D D G V+ +L+ + +++ Q + Q+ DRE+ S ++ ++ +DQ T A+ ++ + D NDN P+F R + + + L+ + V A DKD N+ IE+++ E FQ+D+ SG + + K + + + A+D G +V I E+++ + YEF + E N+ VG V + AN+ ++Y II DR Q R D G I T LDRE+Q++Y LT++A + ++ S+ + V I IID+NDN P F ++ S+ +VG EI D D G NS I Y +
Sbjct: 318 VNPETGVISTTERVN----CPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDE---NAVNGTVVAAVAVKDSDSGLNGRTSVRIV-----SGNELGHFRLEEAADLHI-VRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSA-VLSELAPTGSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREI-RDTVELSISARDGGPNP--KFAYTQLKVIILDENDEAPQF----SQRE----QNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEIVLKSKLEMLECGQAQ----AGGYEFQMVEDHEQQRNSQPNREVGIVQVKSTNGKANSHIEYDIIQGDR--------------AQNFRIDTRSGRITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSL 984 HSP 14 Score: 140.584 bits (353), Expect = 5.466e-33 Identity = 174/696 (25.00%), Postives = 302/696 (43.39%), Query Frame = 2
Query: 590 SPSYVSKSL-NVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKE-FQILAI----ANFDREEKSMEKVDILCKDQAYNTA-SKSIV-FQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG-NEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNG-HPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNE 2644
+PS S +L + + D NDNAP Q ++ E + + I + KA D D +N + Y L++ +G ++I R+ L DRE++ Y ++ A D G P TG+ +++ +LDKNDN P F R ++ ++ENA IG + V++ D D AN +Y + ++ +GNI V ++D + + + V+A DGA +R E + I + D+ND PE + P + ++ + ++A K G ++S SL M + P+ E F A+ + + R ++M + +L D S+ +V I+D ++N PKF + + L +V + V A DK +++++ ++ N F + G + + + ++ + + A D G PP++ V I V N P FS++ Y+ + EN +G+++ TV A D D N ++Y IS ++ + + G IV + LD + Y L + D G HP +S + I + DVNDN P F + I + VG + A D D +N+ I Y P +F Q+ I +S +S + + + + K K P S + + V H+L NE
Sbjct: 2787 TPSLRSVTLITLNVTDANDNAPVMEQ---LIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDF----DGTFEITESGEIYTRMRL------DREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTR--LFSLNVTENAEIGSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDE-YILKVVASDGA---WR--AETPITITIQDQNDNAPEFEHSFYS----FSFPELQQSIALVGQIIATDRDKQ---GPNSVISYSLQQPSPMF--SIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYS-ISGGNERQDF----------SVDERTGGIVIQQQLDYDLIQEYHLNITVQDLGYHP--LSSVAMLTIILTDVNDNPPVFNHKEYHCY-IPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTI-SSAVSFDYEERRIYTLQIKAKNPDSSMESYANLYV---HVLGVNE 3434 HSP 15 Score: 133.65 bits (335), Expect = 6.583e-31 Identity = 169/632 (26.74%), Postives = 278/632 (43.99%), Query Frame = 2
Query: 875 VIDREQV-DVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKI-TYRIEDQKASEYFNI-------GNNGNIMVRKNIDYDAGVKG-FQFSVLAIDG-APEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTAS-KSIVFQILDRNDNSPK----------------FTRVFHFR----------VLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMY---TKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF--KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGY---FSFNTQNKKLILNSVL--SKQDDHKLVISACDKGKP-PKCSNP-LWVTIKVV 2617
V+DRE + D Y+L+++ S + T +E+ I++LD NDN P F A SE+A G L +A DAD NG Y I F + G+ + + + D +G +Q ++ A DG +P + G +V + ++D ND P I H L NE A+ V++ + D D G ++ L+ + V+P E +++ + E+V+ + ++AS KS VF + R+ SP+ + FR V ENA V V V D D+ N + +I+ GNE F+++ + ++ VLDREE K+N+T++A D G P +T T + I+V D+ND +P F S Y +SE A G+ V ++TA D D N ++ Y I+S + ++ S P G IVT LDRE + L++ A D G PN + T +K+ I+D ND P F + N T+ +++ + + A D D G N + + + Y F+ + +L L K +++ + A D+G P P+ + +W+ + V
Sbjct: 117 VLDREGMRDHYDLVVL-----SSQPTYPIEVRIKVLDVNDNSPEFPEPSI-AISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRF---GYLQVNVTILDVNDNPP-IFDHSDYNVSL-NETALPGTPVVT------VMASDNDLGDNSKITYYLAETEHQF--TVNP---ETGVIS---------TTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENA-VNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDILSG-----NELKWFSMDPLT------GLIVTTGPLDREIRDTVELSISARDGG-PNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTI---VALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADV 701 HSP 16 Score: 129.413 bits (324), Expect = 1.349e-29 Identity = 147/554 (26.53%), Postives = 238/554 (42.96%), Query Frame = 2
Query: 719 TIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN--NGNIMVRKNIDYDAG-VKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFG--GRDIVSCSLSNNDK-MRLEQVSPSDKEFQILAIA-NFDREEKSMEKVDILCKD----QAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAE-RNSKIEFQII-GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTK-MKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKT 2335
TI A D D N + Y + N + D V + R ++ + +D + + Y L + +D G + L I + D NDN P+F+ +Y+ + EN +G A D D N I Y +F I N NG I + DY+ + Q D + E Y + + V+ N+ P+ + V D + E + V A ++ D D G GR S+NDK R+ D ++ +A + DRE ++ + ++ K+ + +T ++ I D ND P+F + ++ + A+ V V A+DKD +N++ + II GN + F+ID +G++ T LDREET +N+ I A D G PP+TG+ V IE+ D+ND P F+ ISEN GTS+ T+ A D DLP N Y++I + + + + G + + DRE + D+G P S + I ++D NDN T ++
Sbjct: 3247 TILTVGATDDDTGPNGMLRYSISGGNERQDFSVDE--------RTGGIVIQQQLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHC-YIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSMESY-----ANLYVHVLGVNEFYPQFLQPVFHFD-------VSETSAVGTRVGA-VQATDKDSGEDGRVYYLLVGSSNDKGFRI------DTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND-PPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKS-----------WLSVDRNSGVVRSTTSFDREMTPILEAIIEVEDSGKPKQ-KSQHLLTITVLDQNDNPSTTRS 3759 HSP 17 Score: 119.013 bits (297), Expect = 2.145e-26 Identity = 174/690 (25.22%), Postives = 302/690 (43.77%), Query Frame = 2
Query: 593 PSYVSKSLNVEILDINDNAPSW-PQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDY--FLKDRNG----KTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTG-SLELIIQILDKNDNGPIFDRAKYYANKLSENA---NIGFVALTVSAKDADYLA-NGKITYRIEDQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI-IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN---TASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-----SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFS-LSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTT--ESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPY-GYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKP 2575
P L + ILD NDN+P + P+Q S + E + + + + A D D N +I Y L D+N D GV ++ K ++ E++ Y L + AED G + EL I ILD NDN P F + Y A ++ EN N G+V LTV+A DAD N ++ Y +++ S+ F I ++G+I + K +D + + + +++A+D TG V + I++ND E+ H T R+ L + ++ D D G + +L R S + +I DREE S+ + ++ +D + +S ++ + D NDN PKF + ++ V E S FV A+D D N+ + + I G ++H+F I++ S K+ K + + + I A D G+ + +T+ ++ + P F+ ++ F++SE+ G + V+A K++Y I +S L V + LD E Y + + A D P S S T + +N+ D NDN P + + +++ + ES I V+A D D G+N ++Y+++ N + G F T++ ++ L +++ D+ V+ A D+G P
Sbjct: 2257 PQSTESQLLIRILDENDNSPVFDPKQ---YSASVAENASIGAMVLQV-SATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVA--------------KNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLA-RVMENTVPPNGGYV-LTVNAYDADTPPLNSQVRYFLKEGD-SDLFRINASSGDIALLKPLDREQQSE-YTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTP-----------RATDKDEGLNAKLRFNLLGEHMHRFHIDSETG---EISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERIS-KGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTV-ILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGGIMGDSLRVDPNSGL----------LSVGQDGLDYELTHLYEIWIEAADGDTP-SLRSVTLITLNVTDANDNAPVME---QLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQ--NDFDGTFEI-TESGEIYTRMRLDREEIGDYAFVVEAVDQGVP 2891 HSP 18 Score: 98.5969 bits (244), Expect = 2.848e-20 Identity = 98/364 (26.92%), Postives = 162/364 (44.51%), Query Frame = 2
Query: 1625 IVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKI-EFQII-GNEEHFFQIDSSG---------KMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHY---------LLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPT----FKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLI--LNSVLSKQD--DHKLVISACDKGKPPKCSNP-LWVTIKVVKQH 2626
+ ++LD NDNSP+F E+A+ + + A D D N +++I+ GN ++ F++ ++ + T LDRE + + I A+DGG PP+ G V + ++D+ND P F S Y S++E A GT V TV A D DL N+K+ Y + E+ Q++ + + G I T ++ +Q++ + TV A D+G P T V +N++D ND+ P F V ++ G + V D D G N +I GN G+F I +N VL +++ + L + A D+G P + + L + + V H
Sbjct: 142 VRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDA-ATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITY------YLAETEHQFT-------VNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQ-DGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDH 490 HSP 19 Score: 56.9954 bits (136), Expect = 1.604e-7 Identity = 54/198 (27.27%), Postives = 86/198 (43.43%), Query Frame = 2
Query: 443 SYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKL 1036
SY I +GN L ID +T ++ +R+DRE + + + P S ++++E+ D+NDN P++ + +E N+ +I A DPD+ N F G + +S R DRE + E I+ ED+G PK+ L I +LD+NDN P R+ + A L
Sbjct: 3582 SYSIINGN-LKQSFKIDVQTGEISTASRLDREETSTYNLVIG-AIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISE---NEPAGTSIMTLIASDPDLPRNG--GPFTYQLIGGKHKSWLSVDRNSGVVRS-----TTSFDREMTPILEAIIEVEDSGKPKQKSQHLLTITVLDQNDN-PSTTRSLHIAVSL 3766
BLAST of Protocadherin 1b vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0330601) HSP 1 Score: 219.935 bits (559), Expect = 1.422e-57 Identity = 196/683 (28.70%), Postives = 321/683 (47.00%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPS----YVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-------IGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQ 2491
ID + V++ ++ +DRE+ + + + S + S+ V++LD NDN P + +++ V E + E T+ +A D D N+ I Y + N ++ + + D S +K +D E V Y L++ A+D GSP R+ + +L++ ++D NDN P F +++ + L EN +G+ + V A D+D AN +ITY I ++ + + G + K +D + + F F V+A DG K+ VVI V D ND P +P E + E++ V + DPD R + + N + R S + + +A + D +++ + + D + + ++ I D N+ +P F + V E+A V V V A D D N++I + + +G+ + F +G + T LDRE T + +T+ AKDGG+P + T V I V D+ND P F LY+ SI E+A +GTSV V A D D+ N ++KY ++SDR ++ F +I G I T LDRE + + LT +A+D G P +ST V+I + DVND+ PTF S+K + VG +G + A D D G N+ + Y I G+ FS T+
Sbjct: 521 FRIDSRSGVISTRSSLDRET--SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSL--------VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL-ENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGR-FAFQVVAKDGGVPP--KSASSSVVITVQDVNDNDPAF-------NPKYYEANVGEDQPPGTPVTT-VTATDPDEDSRLHYEIT-TGNTRGRFAITSQNGRGLITIA-QSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPV-GTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSDRDIEDGSF---------VIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRLEDVNDSPPTF-ASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTR 1166 HSP 2 Score: 214.927 bits (546), Expect = 5.537e-56 Identity = 218/753 (28.95%), Postives = 346/753 (45.95%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLK---DRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSP---KRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVS---AKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-IGNEEHFFQIDSS---GKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGN-PYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPPNPDTFSDSKTYVF 2689
+D T VVT +DRE + + F P + +L V +LD ND++P++ + S EG + S I + +A D D+ +N++I+Y ++ D G + I S S I +DRE D Y L++ A D S +RT + + +++LD NDN P F + Y ++ E+ G TV+ A DAD N I Y I F+I + +G++ + K +DY++ V+ ++ + A DG ++ ++++ VID ND P + +++EN + +++ ++ D D G ++ S+S D V P Q I DREE+ ++ KD +AS S+V + D NDN P F ++ + P V V A D D +S++ ++I GN F I S G + Q LD ++ ++F +T+ A D G ++ T V I + D N++ P F + Y S+ E+A +GT+V V+A D D+ N ++ Y + ++ES S PF I G IVT LDRE S YLLTV A D G+P S + TT V+I + DVNDN P FK+ SI VG + V A D D G N I Y + + + G F + + + N L ++ L A DKG PP S V+ I + + +P TF+ K ++
Sbjct: 409 VDSRTGVVTTSASLDRELMDVHYFRVVATDDSF-PPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIR--EGATVGSTVITL-RATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTR--SSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSE-RTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYES-VRSYRLVIRAQDGGSPS--RSNTTQLLVNVIDANDNAPRFYTSQFQE-------SVLENVPVGYNII-RVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQ--TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL-----NEESINGLGSPDPFS-INPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQA-SILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSS--------TVEVQIRLEDVNDSPPTFASDKITLY 1121 HSP 3 Score: 119.398 bits (298), Expect = 1.496e-26 Identity = 87/281 (30.96%), Postives = 138/281 (49.11%), Query Frame = 2
Query: 1799 EHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNS--YTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYE---IGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKVV 2617
+ F++DS +G + T LDRE + ++A D PP++GT + + V+D ND P F +E SI E A +G++V T+ A D+D+ N +++Y I + + + +P I G I T+ LDRE Y L V A D S T+T +V++ ++D NDN+P F TV + + G E + + A D D G N+ I Y I GN FS ++ + + L L + ++LVI A D G P + SN + + V+
Sbjct: 404 QSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGI--EAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTV-QVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR-SNTTQLLVNVI 680
BLAST of Protocadherin 1b vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0303223) HSP 1 Score: 219.935 bits (559), Expect = 1.462e-57 Identity = 196/683 (28.70%), Postives = 321/683 (47.00%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPS----YVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-------IGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQ 2491
ID + V++ ++ +DRE+ + + + S + S+ V++LD NDN P + +++ V E + E T+ +A D D N+ I Y + N ++ + + D S +K +D E V Y L++ A+D GSP R+ + +L++ ++D NDN P F +++ + L EN +G+ + V A D+D AN +ITY I ++ + + G + K +D + + F F V+A DG K+ VVI V D ND P +P E + E++ V + DPD R + + N + R S + + +A + D +++ + + D + + ++ I D N+ +P F + V E+A V V V A D D N++I + + +G+ + F +G + T LDRE T + +T+ AKDGG+P + T V I V D+ND P F LY+ SI E+A +GTSV V A D D+ N ++KY ++SDR ++ F +I G I T LDRE + + LT +A+D G P +ST V+I + DVND+ PTF S+K + VG +G + A D D G N+ + Y I G+ FS T+
Sbjct: 521 FRIDSRSGVISTRSSLDRET--SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSL--------VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL-ENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGR-FAFQVVAKDGGVPP--KSASSSVVITVQDVNDNDPAF-------NPKYYEANVGEDQPPGTPVTT-VTATDPDEDSRLHYEIT-TGNTRGRFAITSQNGRGLITIA-QSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPV-GTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSDRDIEDGSF---------VIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRLEDVNDSPPTF-ASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTR 1166 HSP 2 Score: 214.927 bits (546), Expect = 5.999e-56 Identity = 218/753 (28.95%), Postives = 346/753 (45.95%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLK---DRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSP---KRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVS---AKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-IGNEEHFFQIDSS---GKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGN-PYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPPNPDTFSDSKTYVF 2689
+D T VVT +DRE + + F P + +L V +LD ND++P++ + S EG + S I + +A D D+ +N++I+Y ++ D G + I S S I +DRE D Y L++ A D S +RT + + +++LD NDN P F + Y ++ E+ G TV+ A DAD N I Y I F+I + +G++ + K +DY++ V+ ++ + A DG ++ ++++ VID ND P + +++EN + +++ ++ D D G ++ S+S D V P Q I DREE+ ++ KD +AS S+V + D NDN P F ++ + P V V A D D +S++ ++I GN F I S G + Q LD ++ ++F +T+ A D G ++ T V I + D N++ P F + Y S+ E+A +GT+V V+A D D+ N ++ Y + ++ES S PF I G IVT LDRE S YLLTV A D G+P S + TT V+I + DVNDN P FK+ SI VG + V A D D G N I Y + + + G F + + + N L ++ L A DKG PP S V+ I + + +P TF+ K ++
Sbjct: 409 VDSRTGVVTTSASLDRELMDVHYFRVVATDDSF-PPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIR--EGATVGSTVITL-RATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTR--SSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSE-RTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYES-VRSYRLVIRAQDGGSPS--RSNTTQLLVNVIDANDNAPRFYTSQFQE-------SVLENVPVGYNII-RVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQ--TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL-----NEESINGLGSPDPFS-INPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQA-SILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSS--------TVEVQIRLEDVNDSPPTFASDKITLY 1121 HSP 3 Score: 119.398 bits (298), Expect = 1.517e-26 Identity = 87/281 (30.96%), Postives = 138/281 (49.11%), Query Frame = 2
Query: 1799 EHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNS--YTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYE---IGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKVV 2617
+ F++DS +G + T LDRE + ++A D PP++GT + + V+D ND P F +E SI E A +G++V T+ A D+D+ N +++Y I + + + +P I G I T+ LDRE Y L V A D S T+T +V++ ++D NDN+P F TV + + G E + + A D D G N+ I Y I GN FS ++ + + L L + ++LVI A D G P + SN + + V+
Sbjct: 404 QSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGI--EAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTV-QVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR-SNTTQLLVNVI 680
BLAST of Protocadherin 1b vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0088214) HSP 1 Score: 219.935 bits (559), Expect = 1.462e-57 Identity = 196/683 (28.70%), Postives = 321/683 (47.00%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPS----YVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-------IGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQ 2491
ID + V++ ++ +DRE+ + + + S + S+ V++LD NDN P + +++ V E + E T+ +A D D N+ I Y + N ++ + + D S +K +D E V Y L++ A+D GSP R+ + +L++ ++D NDN P F +++ + L EN +G+ + V A D+D AN +ITY I ++ + + G + K +D + + F F V+A DG K+ VVI V D ND P +P E + E++ V + DPD R + + N + R S + + +A + D +++ + + D + + ++ I D N+ +P F + V E+A V V V A D D N++I + + +G+ + F +G + T LDRE T + +T+ AKDGG+P + T V I V D+ND P F LY+ SI E+A +GTSV V A D D+ N ++KY ++SDR ++ F +I G I T LDRE + + LT +A+D G P +ST V+I + DVND+ PTF S+K + VG +G + A D D G N+ + Y I G+ FS T+
Sbjct: 521 FRIDSRSGVISTRSSLDRET--SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSL--------VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL-ENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGR-FAFQVVAKDGGVPP--KSASSSVVITVQDVNDNDPAF-------NPKYYEANVGEDQPPGTPVTT-VTATDPDEDSRLHYEIT-TGNTRGRFAITSQNGRGLITIA-QSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPV-GTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSDRDIEDGSF---------VIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRLEDVNDSPPTF-ASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTR 1166 HSP 2 Score: 214.927 bits (546), Expect = 5.999e-56 Identity = 218/753 (28.95%), Postives = 346/753 (45.95%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLK---DRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSP---KRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVS---AKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-IGNEEHFFQIDSS---GKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGN-PYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPPNPDTFSDSKTYVF 2689
+D T VVT +DRE + + F P + +L V +LD ND++P++ + S EG + S I + +A D D+ +N++I+Y ++ D G + I S S I +DRE D Y L++ A D S +RT + + +++LD NDN P F + Y ++ E+ G TV+ A DAD N I Y I F+I + +G++ + K +DY++ V+ ++ + A DG ++ ++++ VID ND P + +++EN + +++ ++ D D G ++ S+S D V P Q I DREE+ ++ KD +AS S+V + D NDN P F ++ + P V V A D D +S++ ++I GN F I S G + Q LD ++ ++F +T+ A D G ++ T V I + D N++ P F + Y S+ E+A +GT+V V+A D D+ N ++ Y + ++ES S PF I G IVT LDRE S YLLTV A D G+P S + TT V+I + DVNDN P FK+ SI VG + V A D D G N I Y + + + G F + + + N L ++ L A DKG PP S V+ I + + +P TF+ K ++
Sbjct: 409 VDSRTGVVTTSASLDRELMDVHYFRVVATDDSF-PPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIR--EGATVGSTVITL-RATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTR--SSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSE-RTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYES-VRSYRLVIRAQDGGSPS--RSNTTQLLVNVIDANDNAPRFYTSQFQE-------SVLENVPVGYNII-RVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQ--TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL-----NEESINGLGSPDPFS-INPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQA-SILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSS--------TVEVQIRLEDVNDSPPTFASDKITLY 1121 HSP 3 Score: 119.398 bits (298), Expect = 1.517e-26 Identity = 87/281 (30.96%), Postives = 138/281 (49.11%), Query Frame = 2
Query: 1799 EHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNS--YTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYE---IGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKVV 2617
+ F++DS +G + T LDRE + ++A D PP++GT + + V+D ND P F +E SI E A +G++V T+ A D+D+ N +++Y I + + + +P I G I T+ LDRE Y L V A D S T+T +V++ ++D NDN+P F TV + + G E + + A D D G N+ I Y I GN FS ++ + + L L + ++LVI A D G P + SN + + V+
Sbjct: 404 QSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGI--EAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTV-QVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR-SNTTQLLVNVI 680
BLAST of Protocadherin 1b vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0339463) HSP 1 Score: 219.935 bits (559), Expect = 1.626e-57 Identity = 196/683 (28.70%), Postives = 321/683 (47.00%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPS----YVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-------IGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQ 2491
ID + V++ ++ +DRE+ + + + S + S+ V++LD NDN P + +++ V E + E T+ +A D D N+ I Y + N ++ + + D S +K +D E V Y L++ A+D GSP R+ + +L++ ++D NDN P F +++ + L EN +G+ + V A D+D AN +ITY I ++ + + G + K +D + + F F V+A DG K+ VVI V D ND P +P E + E++ V + DPD R + + N + R S + + +A + D +++ + + D + + ++ I D N+ +P F + V E+A V V V A D D N++I + + +G+ + F +G + T LDRE T + +T+ AKDGG+P + T V I V D+ND P F LY+ SI E+A +GTSV V A D D+ N ++KY ++SDR ++ F +I G I T LDRE + + LT +A+D G P +ST V+I + DVND+ PTF S+K + VG +G + A D D G N+ + Y I G+ FS T+
Sbjct: 521 FRIDSRSGVISTRSSLDRET--SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSL--------VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL-ENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGR-FAFQVVAKDGGVPP--KSASSSVVITVQDVNDNDPAF-------NPKYYEANVGEDQPPGTPVTT-VTATDPDEDSRLHYEIT-TGNTRGRFAITSQNGRGLITIA-QSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPV-GTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSDRDIEDGSF---------VIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRLEDVNDSPPTF-ASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTR 1166 HSP 2 Score: 214.927 bits (546), Expect = 6.555e-56 Identity = 218/753 (28.95%), Postives = 346/753 (45.95%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLK---DRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSP---KRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVS---AKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-IGNEEHFFQIDSS---GKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGN-PYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPPNPDTFSDSKTYVF 2689
+D T VVT +DRE + + F P + +L V +LD ND++P++ + S EG + S I + +A D D+ +N++I+Y ++ D G + I S S I +DRE D Y L++ A D S +RT + + +++LD NDN P F + Y ++ E+ G TV+ A DAD N I Y I F+I + +G++ + K +DY++ V+ ++ + A DG ++ ++++ VID ND P + +++EN + +++ ++ D D G ++ S+S D V P Q I DREE+ ++ KD +AS S+V + D NDN P F ++ + P V V A D D +S++ ++I GN F I S G + Q LD ++ ++F +T+ A D G ++ T V I + D N++ P F + Y S+ E+A +GT+V V+A D D+ N ++ Y + ++ES S PF I G IVT LDRE S YLLTV A D G+P S + TT V+I + DVNDN P FK+ SI VG + V A D D G N I Y + + + G F + + + N L ++ L A DKG PP S V+ I + + +P TF+ K ++
Sbjct: 409 VDSRTGVVTTSASLDRELMDVHYFRVVATDDSF-PPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIR--EGATVGSTVITL-RATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTR--SSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSE-RTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYES-VRSYRLVIRAQDGGSPS--RSNTTQLLVNVIDANDNAPRFYTSQFQE-------SVLENVPVGYNII-RVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQ--TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL-----NEESINGLGSPDPFS-INPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQA-SILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSS--------TVEVQIRLEDVNDSPPTFASDKITLY 1121 HSP 3 Score: 119.398 bits (298), Expect = 1.558e-26 Identity = 87/281 (30.96%), Postives = 138/281 (49.11%), Query Frame = 2
Query: 1799 EHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNS--YTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYE---IGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKVV 2617
+ F++DS +G + T LDRE + ++A D PP++GT + + V+D ND P F +E SI E A +G++V T+ A D+D+ N +++Y I + + + +P I G I T+ LDRE Y L V A D S T+T +V++ ++D NDN+P F TV + + G E + + A D D G N+ I Y I GN FS ++ + + L L + ++LVI A D G P + SN + + V+
Sbjct: 404 QSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGI--EAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTV-QVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR-SNTTQLLVNVI 680
BLAST of Protocadherin 1b vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 259.61 bits (662), Expect = 5.764e-71 Identity = 234/793 (29.51%), Postives = 371/793 (46.78%), Query Frame = 2
Query: 317 WILLLISSITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKE------FQILAIANFDR-EEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP-TFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD-HKLVISACDKGKPPKCSNPL 2596
WILLL+ C + EE T I L + Y++ G L +D +T + T +N IDRESL C N D L F +S + + K +EILD NDN P + +S E N I A D D N DY L T+ ++ DS + +L+ + +DRE D Y+L + D GSP R S L I I D NDN P F+R+ +Y +L EN+ +G L V A D+D NG++TY + Q +S + N G I V+ ++D + + +F V A D P+ K+ + V I V D+ND P I + VT D + N I ++ + +A +EV D D G +V+C ++ + +L S + + Q + +++R +E +E V + + A +++ S+ Q+ D NDN+P F+ + + P V +V+A D D+ N+++ + I G E F+I+ ++G++ LDRE+ + + + A D G P GT V ++V+D ND P+F L+ Y FS+ EN + VG VT D D N +++ + D +F MI++ I++ DREK+S Y + A+D G P +S + IN++D NDN P K +N + + S + +VEA D+D G NSE+ + I GNP+G F +++ + + K H+LV+ DKG PP+ + L
Sbjct: 48 WILLLL---CCSANVVTEEQPPNTLIGSLAS--DQGLPDTGHLYKLEVGAPYL---RVDGKTGDIYTTENSIDRESLKDCRNLFEGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPE---NTHVGALFAIPVATDRDSGSNGIADYALTTGPEATNLFSLQVAQDSD-EKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERS-HYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLH-QPSSPVMRLLSIDRNTGIIFVKGSVDREE-ISILKFYVQAKDNGPQS--KSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVAN----ISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPAL-SSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKF---------------MIQNGTYTILSTISFDREKESTYSFRLKAVDGGDP-PRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTAL 802
BLAST of Protocadherin 1b vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 257.299 bits (656), Expect = 2.797e-70 Identity = 237/815 (29.08%), Postives = 380/815 (46.63%), Query Frame = 2
Query: 272 HSNFNSNFLMITFAA---WILLLISS----ITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKE------FQILAIANFDR-EEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP-TFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD-HKLVISACDKGKPPKCSNPL 2596
H ++N + ++A WILLL+ + Q+ EE T I L + Y++ G L +D +T + T +N IDRESL C N D L F +S + + K +EILD NDN P + +S E N I A D D N DY L T+ ++ DS + +L+ + +DRE D Y+L + D GSP R S L I I D NDN P F+R+ +Y +L EN+ +G L V A D+D NG++TY + Q +S + N G I V+ ++D + + +F V A D P+ K+ + V I V D+ND P I + VT D + N I ++ + +A +EV D D G +V+C ++ + +L S + + Q + +++R +E +E V + + A +++ S+ Q+ D NDN+P F+ + + P V +V+A D D+ N+++ + I G E F+I+ ++G++ LDRE+ + + + A D G P GT V ++V+D ND P+F L+ Y FS+ EN + VG VT D D N +++ + D +F MI++ I++ DREK+S Y + A+D G P +S + IN++D NDN P K +N + + S + +VEA D+D G NSE+ + I GNP+G F +++ + + K H+LV+ DKG PP+ + L
Sbjct: 18 HPERSANAMWSRWSAMLVWILLLLCCSANVVNTILYQVTEEQPPNTLIGSLAS--DQGLPDTGHLYKLEVGAPYL---RVDGKTGDIYTTENSIDRESLKDCRNLFEGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPE---NTHVGALFAIPVATDRDSGSNGIADYALTTGPEATNLFSLQVAQDSD-EKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERS-HYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLH-QPSSPVMRLLSIDRNTGIIFVKGSVDREE-ISILKFYVQAKDNGPQS--KSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVAN----ISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPAL-SSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKF---------------MIQNGTYTILSTISFDREKESTYSFRLKAVDGGDP-PRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTAL 797
BLAST of Protocadherin 1b vs. Ensembl Zebrafish
Match: pcdh1b (protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]) HSP 1 Score: 257.299 bits (656), Expect = 2.814e-70 Identity = 234/797 (29.36%), Postives = 372/797 (46.68%), Query Frame = 2
Query: 317 WILLLISS----ITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKE------FQILAIANFDR-EEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP-TFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD-HKLVISACDKGKPPKCSNPL 2596
WILLL+ + Q+ EE T I L + Y++ G L +D +T + T +N IDRESL C N D L F +S + + K +EILD NDN P + +S E N I A D D N DY L T+ ++ DS + +L+ + +DRE D Y+L + D GSP R S L I I D NDN P F+R+ +Y +L EN+ +G L V A D+D NG++TY + Q +S + N G I V+ ++D + + +F V A D P+ K+ + V I V D+ND P I + VT D + N I ++ + +A +EV D D G +V+C ++ + +L S + + Q + +++R +E +E V + + A +++ S+ Q+ D NDN+P F+ + + P V +V+A D D+ N+++ + I G E F+I+ ++G++ LDRE+ + + + A D G P GT V ++V+D ND P+F L+ Y FS+ EN + VG VT D D N +++ + D +F MI++ I++ DREK+S Y + A+D G P +S + IN++D NDN P K +N + + S + +VEA D+D G NSE+ + I GNP+G F +++ + + K H+LV+ DKG PP+ + L
Sbjct: 18 WILLLLCCSANVVNTILYQVTEEQPPNTLIGSLAS--DQGLPDTGHLYKLEVGAPYL---RVDGKTGDIYTTENSIDRESLKDCRNLFEGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPE---NTHVGALFAIPVATDRDSGSNGIADYALTTGPEATNLFSLQVAQDSD-EKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERS-HYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLH-QPSSPVMRLLSIDRNTGIIFVKGSVDREE-ISILKFYVQAKDNGPQS--KSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVAN----ISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPAL-SSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKF---------------MIQNGTYTILSTISFDREKESTYSFRLKAVDGGDP-PRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTAL 779
BLAST of Protocadherin 1b vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 256.529 bits (654), Expect = 2.934e-70 Identity = 234/797 (29.36%), Postives = 372/797 (46.68%), Query Frame = 2
Query: 317 WILLLISS----ITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKE------FQILAIANFDR-EEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP-TFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD-HKLVISACDKGKPPKCSNPL 2596
WILLL+ + Q+ EE T I L + Y++ G L +D +T + T +N IDRESL C N D L F +S + + K +EILD NDN P + +S E N I A D D N DY L T+ ++ DS + +L+ + +DRE D Y+L + D GSP R S L I I D NDN P F+R+ +Y +L EN+ +G L V A D+D NG++TY + Q +S + N G I V+ ++D + + +F V A D P+ K+ + V I V D+ND P I + VT D + N I ++ + +A +EV D D G +V+C ++ + +L S + + Q + +++R +E +E V + + A +++ S+ Q+ D NDN+P F+ + + P V +V+A D D+ N+++ + I G E F+I+ ++G++ LDRE+ + + + A D G P GT V ++V+D ND P+F L+ Y FS+ EN + VG VT D D N +++ + D +F MI++ I++ DREK+S Y + A+D G P +S + IN++D NDN P K +N + + S + +VEA D+D G NSE+ + I GNP+G F +++ + + K H+LV+ DKG PP+ + L
Sbjct: 18 WILLLLCCSANVVNTILYQVTEEQPPNTLIGSLAS--DQGLPDTGHLYKLEVGAPYL---RVDGKTGDIYTTENSIDRESLKDCRNLFEGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPE---NTHVGALFAIPVATDRDSGSNGIADYALTTGPEATNLFSLQVAQDSD-EKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERS-HYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLH-QPSSPVMRLLSIDRNTGIIFVKGSVDREE-ISILKFYVQAKDNGPQS--KSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVAN----ISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPAL-SSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKF---------------MIQNGTYTILSTISFDREKESTYSFRLKAVDGGDP-PRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTAL 779
BLAST of Protocadherin 1b vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 256.914 bits (655), Expect = 3.151e-70 Identity = 236/806 (29.28%), Postives = 376/806 (46.65%), Query Frame = 2
Query: 290 NFLMITFAAWILLLISS----ITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKE------FQILAIANFDR-EEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP-TFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD-HKLVISACDKGKPPKCSNPL 2596
N+ M+ WILLL+ + Q+ EE T I L + Y++ G L +D +T + T +N IDRESL C N D L F +S + + K +EILD NDN P + +S E N I A D D N DY L T+ ++ DS + +L+ + +DRE D Y+L + D GSP R S L I I D NDN P F+R+ +Y +L EN+ +G L V A D+D NG++TY + Q +S + N G I V+ ++D + + +F V A D P+ K+ + V I V D+ND P I + VT D + N I ++ + +A +EV D D G +V+C ++ + +L S + + Q + +++R +E +E V + + A +++ S+ Q+ D NDN+P F+ + + P V +V+A D D+ N+++ + I G E F+I+ ++G++ LDRE+ + + + A D G P GT V ++V+D ND P+F L+ Y FS+ EN + VG VT D D N +++ + D +F MI++ I++ DREK+S Y + A+D G P +S + IN++D NDN P K +N + + S + +VEA D+D G NSE+ + I GNP+G F +++ + + K H+LV+ DKG PP+ + L
Sbjct: 33 NYAML---VWILLLLCCSANVVNTILYQVTEEQPPNTLIGSLAS--DQGLPDTGHLYKLEVGAPYL---RVDGKTGDIYTTENSIDRESLKDCRNLFEGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPE---NTHVGALFAIPVATDRDSGSNGIADYALTTGPEATNLFSLQVAQDSD-EKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERS-HYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLH-QPSSPVMRLLSIDRNTGIIFVKGSVDREE-ISILKFYVQAKDNGPQS--KSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVAN----ISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPAL-SSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKF---------------MIQNGTYTILSTISFDREKESTYSFRLKAVDGGDP-PRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTAL 800
BLAST of Protocadherin 1b vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 247.669 bits (631), Expect = 4.744e-67 Identity = 223/736 (30.30%), Postives = 348/736 (47.28%), Query Frame = 2
Query: 482 LHIDPETH-VVTVKNRIDRESL--CPNQ-------INCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQV----SPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRESL C N + ++ + +SP +EI+DINDN P++ S V++ + E + I A D D N Y L D ++ D ++ +L+ + ++DREQ D Y+L + +D G+P R S L I ILD NDN P F++ Y A +L EN+ +G L V A D+D N +I Y +AS+ + G I V+ ID + V +FSV+A D KT +V I + D ND KP I + VT + + N I +V + +A ++V D D G V+C ++ + +L+QV S S K++ + D E ++I+ D +++ S+ Q+ D NDN+P F++ V + N V EV A D D+ NS++ + I+ + F I+ SG++ VLDRE+ E ++ ++A D G P GT V I V+D ND P+F L+ Y FS+ EN + VG VT ID D N + + + S F +I++ G I++ DRE QS Y + A+D G P +S V IN++D NDN P + + T ++ G + V A D+D G N+E+ Y I GNP+ F + N ++ L + ++ H+LV+ DKGKP + L
Sbjct: 108 LRVDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNF--NSPVITLSIPENTNI-GMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQD-EKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEA-ELPENSPMGHSVLQVKANDSDQGVNAEIDYSF--HQASDTVRRLLHLDRSTGLITVQGPIDRE-DVGTLKFSVVAKDKGANP--KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVAN----ISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPE------------SGEF-VIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTAL 815 HSP 2 Score: 150.984 bits (380), Expect = 2.328e-36 Identity = 168/610 (27.54%), Postives = 266/610 (43.61%), Query Frame = 2
Query: 956 LELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRI-----------------EDQKASEYFNIGNNGNIMVRKNID-YDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL--SNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSP-----KFTRVFHFRVLENAS--VP-NMFVGEVMAVDKDAERNSKIEFQIIGNEE-HFFQIDSSGK-------MYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHK----LVISACDKGKPPKCSNPLWVTIKVVKQH-----ILIPN 2641
L+ I+I+D NDN P F+ + + EN NIG + +A D D NG +Y + +D+K + +G ++ R+ D YD +K + G P + + I ++D ND P K + + E + EN + +SVL ++ D D G + S +++ RL + D+ ++ + DRE+ K ++ KD+ N TA + I D NDN P F V H + N S VP V V D D N+ + + G+ Q+ +G + T LD E +++ + I+A D G+PP + T + ++V D+ND P FS SL E EN I V V+A D D N+++ Y I+ D ++ + I D G+I +LDRE++ HY VVA+D G P S T +V I ++D NDN P F N FS+ +G V +D D GEN+ I +E + F QN + S +S +H+ + A D G PP+ S + VTI V+ ++ I++P+
Sbjct: 160 LDGQIEIMDINDNTPNFN-SPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMG----MLDREQRDSYDLTIK------VQDGGTPA---RASSALLRISILDTNDNAP-------KFEKMAYEAELPENSPMGHSVL-QVKANDSDQGVNAEIDYSFHQASDTVRRLLHL---DRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIF----------SINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIP-SLKGTASVVITVLDRNDNDPKFML-NGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPES----GEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSY-VGVTINVLDENDNAPVIVVPS 727
BLAST of Protocadherin 1b vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 247.284 bits (630), Expect = 6.579e-67 Identity = 223/736 (30.30%), Postives = 348/736 (47.28%), Query Frame = 2
Query: 482 LHIDPETH-VVTVKNRIDRESL--CPNQ-------INCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQV----SPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRESL C N + ++ + +SP +EI+DINDN P++ S V++ + E + I A D D N Y L D ++ D ++ +L+ + ++DREQ D Y+L + +D G+P R S L I ILD NDN P F++ Y A +L EN+ +G L V A D+D N +I Y +AS+ + G I V+ ID + V +FSV+A D KT +V I + D ND KP I + VT + + N I +V + +A ++V D D G V+C ++ + +L+QV S S K++ + D E ++I+ D +++ S+ Q+ D NDN+P F++ V + N V EV A D D+ NS++ + I+ + F I+ SG++ VLDRE+ E ++ ++A D G P GT V I V+D ND P+F L+ Y FS+ EN + VG VT ID D N + + + S F +I++ G I++ DRE QS Y + A+D G P +S V IN++D NDN P + + T ++ G + V A D+D G N+E+ Y I GNP+ F + N ++ L + ++ H+LV+ DKGKP + L
Sbjct: 108 LRVDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNF--NSPVITLSIPENTNI-GMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQD-EKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEA-ELPENSPMGHSVLQVKANDSDQGVNAEIDYSF--HQASDTVRRLLHLDRSTGLITVQGPIDRE-DVGTLKFSVVAKDKGANP--KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVAN----ISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPE------------SGEF-VIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTAL 815 HSP 2 Score: 150.599 bits (379), Expect = 3.741e-36 Identity = 162/586 (27.65%), Postives = 256/586 (43.69%), Query Frame = 2
Query: 968 IQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYR-IEDQKASEYFNIG-------NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL--SNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSP-----KFTRVFHFRVLENAS--VP-NMFVGEVMAVDKDAERNSKIEFQIIGNEE-HFFQIDSSGK-------MYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHK----LVISACDKGKPPKCSNPLWVTIKVVKQH 2626
I+I+D NDN P F+ + + EN NIG + +A D D NG +Y I +A + F + ++V +D + + ++ DG + + I ++D ND P K + + E + EN + +SVL ++ D D G + S +++ RL + D+ ++ + DRE+ K ++ KD+ N TA + I D NDN P F V H + N S VP V V D D N+ + + G+ Q+ +G + T LD E +++ + I+A D G+PP + T + ++V D+ND P FS SL E EN I V V+A D D N+++ Y I+ D ++ + I D G+I +LDRE++ HY VVA+D G P S T +V I ++D NDN P F N FS+ +G V +D D GEN+ I +E + F QN + S +S +H+ + A D G PP+ S + VTI V+ ++
Sbjct: 164 IEIMDINDNTPNFN-SPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQ-RDSYDLTIKVQDGGTPA--RASSALLRISILDTNDNAP-------KFEKMAYEAELPENSPMGHSVL-QVKANDSDQGVNAEIDYSFHQASDTVRRLLHL---DRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIF----------SINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIP-SLKGTASVVITVLDRNDNDPKFML-NGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPES----GEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSY-VGVTINVLDEN 717
BLAST of Protocadherin 1b vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 247.669 bits (631), Expect = 8.872e-67 Identity = 223/738 (30.22%), Postives = 347/738 (47.02%), Query Frame = 2
Query: 482 LHIDPETH-VVTVKNRIDRESL--CPNQ-------INCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQV----SPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRI--ISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRESL C N + ++ + +SP +EI+DINDN P++ S V++ + E + I A D D N Y L D ++ D ++ +L+ + ++DREQ D Y+L + +D G+P R S L I ILD NDN P F++ Y A +L EN+ +G L V A D+D N +I Y +AS+ + G I V+ ID + V +FSV+A D KT +V I + D ND KP I + VT + + N I +V + +A ++V D D G V+C ++ + +L+QV S S K++ + D E ++I+ D +++ S+ Q+ D NDN+P F++ V + N V EV A D D+ NS++ + I+ + F I+ SG++ VLDRE+ E ++ ++A D G P GT V I V+D ND P+F L+ Y FS+ EN + VG VT ID D N + + S F +I++ G I++ DRE QS Y + A+D G P +S V IN++D NDN P + + T ++ G + V A D+D G N+E+ Y I GNP+ F + N ++ L + ++ H+LV+ DKGKP + L
Sbjct: 108 LRVDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNF--NSPVITLSIPENTNI-GMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQD-EKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEA-ELPENSPMGHSVLQVKANDSDQGVNAEIDYSF--HQASDTVRRLLHLDRSTGLITVQGPIDRE-DVGTLKFSVVAKDKGANP--KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVAN----ISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEF---------------VIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTAL 815 HSP 2 Score: 151.369 bits (381), Expect = 2.196e-36 Identity = 163/589 (27.67%), Postives = 257/589 (43.63%), Query Frame = 2
Query: 956 LELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYR-IEDQKASEYFNIG-------NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL--SNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSP-----KFTRVFHFRVLENAS--VP-NMFVGEVMAVDKDAERNSKIEFQIIGNEE-HFFQIDSSGK-------MYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHK----LVISACDKGKPPKCSNPLWVTIKVVKQ 2623
L+ I+I+D NDN P F+ + + EN NIG + +A D D NG +Y I +A + F + ++V +D + + ++ DG + + I ++D ND P K + + E + EN + +SVL ++ D D G + S +++ RL + D+ ++ + DRE+ K ++ KD+ N TA + I D NDN P F V H + N S VP V V D D N+ + + G+ Q+ +G + T LD E +++ + I+A D G+PP + T + ++V D+ND P FS SL E EN I V V+A D D N+++ Y I+ D ++ + I D G+I +LDRE++ HY VVA+D G P S T +V I ++D NDN P F N FS+ +G V +D D GEN+ I +E + F QN + S +S +H+ + A D G PP+ S + VTI V+ +
Sbjct: 160 LDGQIEIMDINDNTPNFN-SPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQ-RDSYDLTIKVQDGGTPA--RASSALLRISILDTNDNAP-------KFEKMAYEAELPENSPMGHSVL-QVKANDSDQGVNAEIDYSFHQASDTVRRLLHL---DRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIF----------SINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIP-SLKGTASVVITVLDRNDNDPKFML-NGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPES----GEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSY-VGVTINVLDE 716
BLAST of Protocadherin 1b vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 248.054 bits (632), Expect = 1.153e-66 Identity = 223/736 (30.30%), Postives = 348/736 (47.28%), Query Frame = 2
Query: 482 LHIDPETH-VVTVKNRIDRESL--CPNQ-------INCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQV----SPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRESL C N + ++ + +SP +EI+DINDN P++ S V++ + E + I A D D N Y L D ++ D ++ +L+ + ++DREQ D Y+L + +D G+P R S L I ILD NDN P F++ Y A +L EN+ +G L V A D+D N +I Y +AS+ + G I V+ ID + V +FSV+A D KT +V I + D ND KP I + VT + + N I +V + +A ++V D D G V+C ++ + +L+QV S S K++ + D E ++I+ D +++ S+ Q+ D NDN+P F++ V + N V EV A D D+ NS++ + I+ + F I+ SG++ VLDRE+ E ++ ++A D G P GT V I V+D ND P+F L+ Y FS+ EN + VG VT ID D N + + + S F +I++ G I++ DRE QS Y + A+D G P +S V IN++D NDN P + + T ++ G + V A D+D G N+E+ Y I GNP+ F + N ++ L + ++ H+LV+ DKGKP + L
Sbjct: 108 LRVDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNF--NSPVITLSIPENTNI-GMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQD-EKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEA-ELPENSPMGHSVLQVKANDSDQGVNAEIDYSF--HQASDTVRRLLHLDRSTGLITVQGPIDRE-DVGTLKFSVVAKDKGANP--KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVAN----ISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPE------------SGEF-VIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTAL 815 HSP 2 Score: 151.754 bits (382), Expect = 1.973e-36 Identity = 166/599 (27.71%), Postives = 260/599 (43.41%), Query Frame = 2
Query: 956 LELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRI-----------------EDQKASEYFNIGNNGNIMVRKNID-YDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL--SNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSP-----KFTRVFHFRVLENAS--VP-NMFVGEVMAVDKDAERNSKIEFQIIGNEE-HFFQIDSSGK-------MYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHK----LVISACDKGKPPKCSNPLWVTIKVVKQ 2623
L+ I+I+D NDN P F+ + + EN NIG + +A D D NG +Y + +D+K + +G ++ R+ D YD +K + G P + + I ++D ND P K + + E + EN + +SVL ++ D D G + S +++ RL + D+ ++ + DRE+ K ++ KD+ N TA + I D NDN P F V H + N S VP V V D D N+ + + G+ Q+ +G + T LD E +++ + I+A D G+PP + T + ++V D+ND P FS SL E EN I V V+A D D N+++ Y I+ D ++ + I D G+I +LDRE++ HY VVA+D G P S T +V I ++D NDN P F N FS+ +G V +D D GEN+ I +E + F QN + S +S +H+ + A D G PP+ S + VTI V+ +
Sbjct: 160 LDGQIEIMDINDNTPNFN-SPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMG----MLDREQRDSYDLTIK------VQDGGTPA---RASSALLRISILDTNDNAP-------KFEKMAYEAELPENSPMGHSVL-QVKANDSDQGVNAEIDYSFHQASDTVRRLLHL---DRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIF----------SINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIP-SLKGTASVVITVLDRNDNDPKFML-NGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPES----GEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSY-VGVTINVLDE 716
BLAST of Protocadherin 1b vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 247.669 bits (631), Expect = 1.613e-66 Identity = 223/738 (30.22%), Postives = 347/738 (47.02%), Query Frame = 2
Query: 482 LHIDPETH-VVTVKNRIDRESL--CPNQ-------INCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQV----SPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRI--ISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRESL C N + ++ + +SP +EI+DINDN P++ S V++ + E + I A D D N Y L D ++ D ++ +L+ + ++DREQ D Y+L + +D G+P R S L I ILD NDN P F++ Y A +L EN+ +G L V A D+D N +I Y +AS+ + G I V+ ID + V +FSV+A D KT +V I + D ND KP I + VT + + N I +V + +A ++V D D G V+C ++ + +L+QV S S K++ + D E ++I+ D +++ S+ Q+ D NDN+P F++ V + N V EV A D D+ NS++ + I+ + F I+ SG++ VLDRE+ E ++ ++A D G P GT V I V+D ND P+F L+ Y FS+ EN + VG VT ID D N + + S F +I++ G I++ DRE QS Y + A+D G P +S V IN++D NDN P + + T ++ G + V A D+D G N+E+ Y I GNP+ F + N ++ L + ++ H+LV+ DKGKP + L
Sbjct: 100 LRVDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNF--NSPVITLSIPENTNI-GMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQD-EKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEA-ELPENSPMGHSVLQVKANDSDQGVNAEIDYSF--HQASDTVRRLLHLDRSTGLITVQGPIDRE-DVGTLKFSVVAKDKGANP--KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVAN----ISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEF---------------VIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTAL 807 HSP 2 Score: 151.369 bits (381), Expect = 2.227e-36 Identity = 163/589 (27.67%), Postives = 257/589 (43.63%), Query Frame = 2
Query: 956 LELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYR-IEDQKASEYFNIG-------NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL--SNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSP-----KFTRVFHFRVLENAS--VP-NMFVGEVMAVDKDAERNSKIEFQIIGNEE-HFFQIDSSGK-------MYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHK----LVISACDKGKPPKCSNPLWVTIKVVKQ 2623
L+ I+I+D NDN P F+ + + EN NIG + +A D D NG +Y I +A + F + ++V +D + + ++ DG + + I ++D ND P K + + E + EN + +SVL ++ D D G + S +++ RL + D+ ++ + DRE+ K ++ KD+ N TA + I D NDN P F V H + N S VP V V D D N+ + + G+ Q+ +G + T LD E +++ + I+A D G+PP + T + ++V D+ND P FS SL E EN I V V+A D D N+++ Y I+ D ++ + I D G+I +LDRE++ HY VVA+D G P S T +V I ++D NDN P F N FS+ +G V +D D GEN+ I +E + F QN + S +S +H+ + A D G PP+ S + VTI V+ +
Sbjct: 152 LDGQIEIMDINDNTPNFN-SPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQ-RDSYDLTIKVQDGGTPA--RASSALLRISILDTNDNAP-------KFEKMAYEAELPENSPMGHSVL-QVKANDSDQGVNAEIDYSFHQASDTVRRLLHL---DRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIF----------SINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIP-SLKGTASVVITVLDRNDNDPKFML-NGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPES----GEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSY-VGVTINVLDE 708
BLAST of Protocadherin 1b vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 269.24 bits (687), Expect = 1.848e-74 Identity = 227/764 (29.71%), Postives = 367/764 (48.04%), Query Frame = 2
Query: 425 IVSVSTSYRIFDGNKLLNC------LHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKY-DSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEI----IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSP----SDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPL 2596
I S++ Y + D L L +D +T + T + IDRE L C NQI + +L F +S + + ++ + +E+ DINDN P++ S V++ E + S I A D D N Y L+ G ++ ++ + ++ +L+ + +DRE+ D Y+L + +D G+P R S L + +LD NDN P F+R Y A +LSEN+ IG + V A D+D AN +I Y +A E N G I V+ +D + + +FSVLA D GA K+ +VV+ V D ND P I I VT +D + N I +V + +A ++V D D G V+C ++ + +L Q S S K++ + D E+ ++I+ D +++ S+ Q++D NDN+P FT+ + P V EV A D D+ N+++ + + + F I +G++ K LDRE+ + + + ++A D G P GT V + V+D ND P+F LS Y FS+ EN + VG VT ID D N +++ + D +I++ G I++ DRE+QS Y + A+D G P ++ V IN++D NDN P + T + T ++ +G + V A D+D G N+E+ Y I GNPYG F + + + L + ++ H+LV+ D+GKPP+ L
Sbjct: 52 IGSLAADYGLPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNF--ASPVITLAIPENTNIGS-LFPIPLATDRDAGPNGVASYELQ--AGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEA-ELSENSPIGHSVIQVKANDSDQGANAEIDYTF--HQAPEVVRRLLRLDRNTGLITVQGPVDRE-DLSTLRFSVLAKDRGA---TPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMAN----ISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDF-------------VIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVP-PRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTAL 785
BLAST of Protocadherin 1b vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 269.24 bits (687), Expect = 1.848e-74 Identity = 227/764 (29.71%), Postives = 367/764 (48.04%), Query Frame = 2
Query: 425 IVSVSTSYRIFDGNKLLNC------LHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKY-DSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEI----IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSP----SDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPL 2596
I S++ Y + D L L +D +T + T + IDRE L C NQI + +L F +S + + ++ + +E+ DINDN P++ S V++ E + S I A D D N Y L+ G ++ ++ + ++ +L+ + +DRE+ D Y+L + +D G+P R S L + +LD NDN P F+R Y A +LSEN+ IG + V A D+D AN +I Y +A E N G I V+ +D + + +FSVLA D GA K+ +VV+ V D ND P I I VT +D + N I +V + +A ++V D D G V+C ++ + +L Q S S K++ + D E+ ++I+ D +++ S+ Q++D NDN+P FT+ + P V EV A D D+ N+++ + + + F I +G++ K LDRE+ + + + ++A D G P GT V + V+D ND P+F LS Y FS+ EN + VG VT ID D N +++ + D +I++ G I++ DRE+QS Y + A+D G P ++ V IN++D NDN P + T + T ++ +G + V A D+D G N+E+ Y I GNPYG F + + + L + ++ H+LV+ D+GKPP+ L
Sbjct: 52 IGSLAADYGLPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNF--ASPVITLAIPENTNIGS-LFPIPLATDRDAGPNGVASYELQ--AGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEA-ELSENSPIGHSVIQVKANDSDQGANAEIDYTF--HQAPEVVRRLLRLDRNTGLITVQGPVDRE-DLSTLRFSVLAKDRGA---TPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMAN----ISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDF-------------VIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVP-PRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTAL 785
BLAST of Protocadherin 1b vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 254.988 bits (650), Expect = 1.943e-69 Identity = 202/676 (29.88%), Postives = 326/676 (48.22%), Query Frame = 2
Query: 638 NDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKY-DSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSP----SDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPL 2596
NDN P++ S V++ E + S I A D D N Y L+ G ++ ++ + ++ +L+ + +DRE+ D Y+L + +D G+P R S L + +LD NDN P F+R Y A +LSEN+ IG + V A D+D AN +I Y +A E N G I V+ +D + + +FSVLA D GA K+ +VV+ V D ND P I + VT +D + N I +V + +A ++V D D G V+C ++ + +L Q S S K++ + D E+ ++I+ D +++ S+ Q++D NDN+P FT+ + P V EV A D D+ N+++ + + + F I +G++ K LDRE+ + + + ++A D G P GT V + V+D ND P+F LS Y FS+ EN + VG VT ID D N +++ + D +I++ G I++ DRE+QS Y + A+D G P ++ V IN++D NDN P + T + T ++ +G + V A D+D G N+E+ Y I GNPYG F + + + L + ++ H+LV+ D+GKPP+ L
Sbjct: 1 NDNTPNF--ASPVITLAIPENTNIGS-LFPIPLATDRDAGPNGVASYELQ--AGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEA-ELSENSPIGHSVIQVKANDSDQGANAEIDYTF--HQAPEVVRRLLRLDRNTGLITVQGPVDRE-DLSTLRFSVLAKDRGA---TPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMAN----ISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDF-------------VIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVP-PRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTAL 646 HSP 2 Score: 122.865 bits (307), Expect = 9.480e-28 Identity = 132/517 (25.53%), Postives = 233/517 (45.07%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFI-------SPSYVSKSLNVEILDINDNAPSW--------PQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTS----RRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASE-YFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTRVFH--FRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEV 1948
L +D T ++TV+ +DRE L LRF + +P + V + D+NDNAP+ Q + + +E + E + + + D D EN+ + + + ++++ S T ++ L +D E+V Y + ++A D+G+P + + L +Q++D NDN P+F ++ EN G V V+A DAD +N ++ Y +E + A++ F I NG I V+ ++D + ++ V+A D G+P G V++ V+D ND P+ ++ + N PA+ S + + V D D G V S+ ++ + Q + IL+ +FDRE++S + D +A + +LD NDN+P T + R+L + V +V A D D+ N+++ + I GN FQI S SG + ++ ++R + + D G PP+ GT LV + V
Sbjct: 169 LRLDRNTGLITVQGPVDREDLS--------TLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISE---DVAEETAVALVQVSDRDEGENAAVTCVV------AGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEV-AFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQ-RDSYELKVVAADRGSPS---LQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPAL--------SPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQ----NGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYV 651 HSP 3 Score: 122.865 bits (307), Expect = 1.015e-27 Identity = 144/584 (24.66%), Postives = 245/584 (41.95%), Query Frame = 2
Query: 593 PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWK-IKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFD-RAKYYANKLSENANIG-------FVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGN-------IMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRD-PLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMR-LEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNT--ASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMF-VGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFS---ISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSY 2269
P S L V +LD NDNAP + + + + E + + I + KA D D N++IDY + V + ++ D +T P +DRE + ++A+D G+ ++ ++++ + D NDN P + R ANI VAL V D D N +T + + G+ + +DY+ VK + ++A+D T +V V+D ND P +T+ P N+P V+A + D D G + SL + L +SP + E ++ + DRE++ ++ ++ D+ + + +++ +LD NDN PKF ++F V+EN +P + VG V +D D N++++ + + F + +G + + DRE+ + + A DGG PP++ VTI V+D ND P F + S ++ +G +V VTA D D N ++ Y I Y FQ+ H G I + ++R + L V D G P Y
Sbjct: 98 PRASSALLRVTVLDTNDNAPKFERPTYEAELS--ENSPIGHSVIQV-KANDSDQGANAEIDYTFH----QAPEVVRRLLRLDRNTGLITVQGP---VDREDLSTLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVAL-VQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEK-VKDYTIEIVAVDSGNPPLSSTNSLKV--QVVDVNDNAPVFTQSITEVAFPENNKPG---------EVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVK--TSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMEN--MPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAP-FITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGN-------PYGL---FQIGSHS-GAITLEKEIERRHHGLHRLVVKVSDRGKPPRY 642
BLAST of Protocadherin 1b vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 228.409 bits (581), Expect = 1.519e-61 Identity = 211/723 (29.18%), Postives = 337/723 (46.61%), Query Frame = 2
Query: 503 HVVTVKNRIDRESLCPN-----QINCDIMLRFFISPSYVSKSLNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKA---SEYFNIGNN-GNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI-----------IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKT--SNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKP 2575
+ T NRIDRE LC + C L I P+ + + ++I+ D NDNAP +P S V++ + E + SR I A DPD N Y L NG++ G+ I + +L+ + +DREQ D Y + + ED G+P+++ + L + + D NDN P+F + + + ENA +G + + A DAD +N +I Y Q A F + N G I V++++D + + +VLA DG+ R T V I V D ND P I V+++++DP+ + A+I + KD D G+ V C + L+ V D ++ + + D E I+ D + +++ + ++ D NDN P F + V V EN + +++ + A D+D+ +N+ I +Q+ G FF +D +G + +V +REE E+F T+ A+D G PP V + V+D ND P+F+ + ++F +SEN ++VG +T D D N + I++D F + Y G I + DRE+QS Y V A D G P +ST V IN++DVNDN P + SN + + + G + V AVD+D G N+E+ Y I GN G F + + L + D H+LV++ D G P
Sbjct: 84 EIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFP--SPVINISIPENTLINSR-FPIPSATDPDTGFNGVQHYEL--LNGQSVFGL-DIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH-IPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAI-HKVTVLASDGSSTPARAT----VTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALIT-----------VSDKDTDVNGK--VICFIEREVPFHLKAVY--DNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSEN-NRRGLYLTTISATDEDSGKNADIVYQL-GPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSILNDNENFVLDPY---------------SGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYP 761
BLAST of Protocadherin 1b vs. Ensembl Mouse
Match: Fat4 (FAT atypical cadherin 4 [Source:MGI Symbol;Acc:MGI:3045256]) HSP 1 Score: 232.646 bits (592), Expect = 2.413e-61 Identity = 213/753 (28.29%), Postives = 350/753 (46.48%), Query Frame = 2
Query: 443 SYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYD-----SSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPD--FGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKD----------QAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQV---LDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSL-SLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHD--RGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPLWVTIKVV 2617
+YR+ + + L I+ T + IDRESL + +N ++ SP+Y ++ + V + D+NDNAP +P S VV+F E G+ R + +D A D D+ N + + +G N + + D S + L+ +DRE Y+L++ ED G PKR G L++ + + D NDN P+F + Y A + E+A +G L V+A DAD N I YR++D+ + + G I VR+ +D++A + + +V A D G P TG E I ++D ND P + + P T+ A ++ +V+A + V D D +I L N++ E ++ +A+ DRE + + D QA ++ + ++F + D ND+ P F + + L P +V V A D D+ N+ + + I+ GN +F I + T LDRE + + I A+D G PK + + V+D+ND KP FS YE S+ ENA GT + + A DRDL N +++ + + ++ R D G + T LDRE+Q+ Y L+++A D G P +ST V ++++D+NDN P F + IQ E G + TV A D D G N + Y I G+ F + ++ + L +++ ++L + A D G + N VT+ V+
Sbjct: 71 TYRLSESHALF---AINSSTGALYTTATIDRESLPSDVVNLVVLSS---SPTYPTE-VRVLVRDLNDNAPVFPDPSIVVTFKEDSGS---GRQVILDTATDSDIGSNGVDHHSYRIVSG---NEAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAG-VPEDAVVGSSVLQVAAADADEGTNADIRYRLQDE-GTPFQMDPETGLITVREPLDFEA-RRQYSLTVQATDRGVPS---LTGRAEAFIQLLDVNDNDPVVKF---RYFPATSRYASVDENAQVGTVVALLTVTDADSPAANGNISVQILGGNEQRHFEVQRSKVPNLSLIKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIF-VNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQ------------RLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLGSP-PQSSTAQVNVSLLDINDNSPVFYPV-QYFAHIQENEPGGSYVTTVSATDPDMGPNGTVKYSISAGD-RSRFQIHAKSGVISTKMALDREEKTAYQLQVVATDGGN-LQSPNQAIVTVTVL 784 HSP 2 Score: 213.001 bits (541), Expect = 4.050e-55 Identity = 202/736 (27.45%), Postives = 336/736 (45.65%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPS-----WPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKV---IDREQVDVYELILIAEDN-GSP------KRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFS---VLAIDGAPEE-YRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL--SNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKL-ILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKV 2614
+DPET ++TV+ +D E+ + R S + +++ +++LD+NDN P +P S+ S E + + A P N N + G + ++ S+ L IKV +DRE++ Y L + DN G+P R+ L+I + D ND+ P+F++ Y N LSE G VSA D D N + Y I +F+I + ++ AG + + VL I + + K ++V+ V+D NDEKP P E +++EN +L + D D G V SL + ND+ RL ++ P ++ DREE++ + IL D +++ + +LD NDNSP F V +F ++ +V V A D D N +++ I + FQI + SG + TK LDREE + + ++A DGG+ +VT+ V+D D P FS + Y F + EN +G VG+V+A DL AN + Y I + + F + G++ T ++DRE+QS Y L +VA + T T V I + D+NDN P F + +++ +++ ++ G+ I +AVD D G N ++Y +++ NP F+ N QN + +L ++ +++ I A D G P+ S+ + +T+ V
Sbjct: 296 FQMDPETGLITVREPLDFEARRQYSLTVQATDRGVPSLTGRAEAF-IQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDADSPAANGNISVQIL---------GGNEQRHFEVQRSKVPNLSLIKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQVYRVN-LSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTSA----AGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVF------SQPEGYEVSVVENAPTGTELLV-LGATDRDLGDNGTVRFSLQEAENDQ-RLFRLDPVSGRLS--TASSLDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSYVTTVSATDPDMGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSATTMDLNAN--ISYLITTG--DQRGMFAMNPV---------TGQLTTASVIDREEQSFYQLKIVA----SGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQA-GHSIFQAKAVDPDEGVNGRVLYSLKQ-NPKNLFTINEQNGNISLLGALDVHAGSYQVEIVASDMGV-PQLSSSILLTVYV 986 HSP 3 Score: 187.193 bits (474), Expect = 3.732e-47 Identity = 198/761 (26.02%), Postives = 330/761 (43.36%), Query Frame = 2
Query: 353 KIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRES---LCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPS-WPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSST-SRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREK------QSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVG--YEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPP 2578
++ + E GTE+ VL ++ + + + + + +DP + ++ + +DRE C + + D+ P + +NV +LDINDN+P +P Q F + N+ + A DPD+ N + Y + D ++I S S ++ L DRE+ Y+L ++A D G+ + + + +LD DN P+F +A Y + + EN +G+ +VSA D AN I+Y I F + G + ID + +Q ++A GA TG+ V I V D ND P + V + +EN +S+ + DPD G V SL N K + +++ I + D S + V+I+ D S SI+ + D NDN P F ++ + L + N +V A DKD+ N +I + I GN F I G++Y K LDRE +++ + ++A D P + T VT+ + D+ND +P F+ + Y F E G+ VG V+A+D+D N +++Y + + P + GEI + + DRE + + TV A+D G P TV + + D+NDN P F K + +E+ ++ V A D+D G N I Y I +GN F+ ++ + ++ L L + + L+I A D G P
Sbjct: 589 EVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLG----SPPQSSTAQVNVSLLDINDNSPVFYPVQY----FAHIQENEPGGSYVTTVSATDPDMGPNGTVKYSIS----AGDRSRFQIHAKSGVISTKMAL------DREEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAY-SFVVFENVALGYHVGSVSATTMDLNAN--ISYLITTGDQRGMFAMNPVTGQLTTASVIDREE-QSFYQLKIVASGGA-----VTGDTVVNITVKDLNDNAPHFLQAVESIN-------AVENWQAGHSIF-QAKAVDPDEGVNGRVLYSLKQNPKNLF---TINEQNGNISLLGALDVHAGSYQ-VEIVASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTITDGNNGDAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRY-------------AFEVTQPNFELHAVTGEITSTHKFDRESLMRRRGTAVFSFTVTAMDRGLPQPLKDQATVHVYMKDINDNAPKFL---KDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEERQFAIDSFSGQVTLVGKLDYEATSAYSLLIQAVDSGAIP 1294 HSP 4 Score: 187.193 bits (474), Expect = 3.996e-47 Identity = 197/674 (29.23%), Postives = 301/674 (44.66%), Query Frame = 2
Query: 626 ILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSP---KRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQV------SPSDKEFQILAIA-------NFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG-NEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPK 2581
ILD+NDN P + S S E N T+ + D D NSQ+ Y + + + + + D + L +K +DRE Y L++ D P + T + ++ I +LD NDN P+F K + EN I V A D D N I Y + + ++ F+IG +G + + +D + V + +V+A D G P T EVV+MV+D ND P + + +++K+ G DI+ S ++ND+ QV + +EF+I ++ + DRE + + D+ + T S ++ +LD ND P F + V EN + +V+A D D NS++ + ++G NE++ F + +SG++ Q LDRE + F + + A D G P TGTG + I V DIND P F+ ++Y SI+E+A GT V V A D D AN + Y II S F I G+I+T LLDRE + +Y L VVA D G P S +S+T+V + I DVNDN P F+ + V I + G + V D D G NSE+ Y + G F + ++ LS + + D G PK
Sbjct: 1934 ILDVNDNPPVFSMSSYSTSLME---NLPLGSTVLVFNVTDADDGVNSQLSYSIA-----SGDSLGQFAVD----KHGVLKTLKALDRESQSFYNLVIQVHDLPQPPTSRFTSTAQVSIILLDVNDNPPMFLSPKL--TYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPSGNK-FSIGTIDGEVHLTGELDREE-VSNYSLTVVATDKGQPPLSSST---EVVVMVLDINDNNP-----------------------VFAQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENLGTLPRAILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVTQSLDREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIAEDARTGTDVLLVNASDADAAANAVISYSII----GGNSQF---------TINPSTGQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVTITDVNDNPPRFQ-HHPYVTHIPSPTPPGSFVFAVTVTDADIGSNSELHYSL-SGRNSEKFHIDPLRGAIMAAGPLSGASEVTFSVHVKDGGSFPK 2550 HSP 5 Score: 185.652 bits (470), Expect = 9.974e-47 Identity = 192/710 (27.04%), Postives = 326/710 (45.92%), Query Frame = 2
Query: 353 KIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVS-KSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL-SNNDKMRLEQVSPSDKEFQILA---IANFDREEKSMEKVDILCKDQAYNT--ASKSIVFQILDRNDNSPKFTRVFHFR-VLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIE 2452
K Q F P+N ++T +++ + SY I GN L + IDP T V++ +D E + + I R P + S + L++ +LDINDNAP++ + V E L R I A D D N Q+DY + + N ++ + I + + E+ I+ +DRE++ YEL + + D GSP ++ S+++II ILD+NDN P F ++ ++ +SEN+ +G+ V+ D D N Y I D N N G+I++ + ++ + + ++ V A D T +V I V D ND P ++ + P + E S + + DPD G V + S ++ R+ + Q+L ++ F + + D+ + + ++ +D NDN P+F + +F V +N V + DKD NS++E+ + GN F++D+ +G + L + + F + + AKD G+PP + +V I V + N PEFS + +I E+ IG+ V TV+A DRD N + Y IIS ++E F +SS G + LD E S + +T+ A D G + T ++ +++IDVNDN P F ++ ++ G + + A D D G N+ I Y ++
Sbjct: 2572 KEQTFMFPENQPVGTLVTTITGSSLRGETLSYYIASGN-LGDTFQIDPLTGQVSISQPLDFEKI--QKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEILE----NLSPRKILTVSATDKDSGPNGQLDYEIVNGNQESS---FTINHATG-----EIRSIRPLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRF--SQIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSIVDTSLPFTIN-PNTGDIVISRPLNREDTDR-YRIRVSAHDSG-----WTVSTDVTIFVTDINDNTPRF----SRPSYYLDCPELPE----LGSRVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFLQNKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSLVSDLNQNFLIRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSVVRTVSARDRDTAMNGLISYNIISG--NEEGIFAINSS---------TGVVTLAKALDYEMSSKHEMTISATDGGW-VARTGYCSLTVSVIDVNDNSPVF-VPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAYTVQ 3236 HSP 6 Score: 182.956 bits (463), Expect = 7.237e-46 Identity = 187/668 (27.99%), Postives = 295/668 (44.16%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIE-DQKASEYFNIGNNGNIMVRKNIDYDA-----GVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY----NTASKSIVFQILDRNDNSPKFTRVFHF-RVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEH-FFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHP--NSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKG 2569
L V + D+NDN P + Q S V+ +E E + SR + +A D D N +I Y + D N G++ D + EL DRE D Y L+++A D + ++ + + + D NDN P+F+ Y E G VSA D D+ NG++ Y E Q E + G I D ++ G F F+V A+D G P+ + + V + + D ND P+ + + A + + + + + D D G ++ S+ ++ R Q + Q+ + D E S + I D +T + SI ILD NDN+P F + F VLEN + + V V A D D+ N+ + + I G+ H F I ++G ++ + LD E + + I AKD G PP++ T V I+V D ND P F SI EN +GTSV +VTA D D N ++ Y II + + ++F I +G I T +DRE + + LTV A D P + V I + D+NDN P F + N + + +G + T+ A D D G N E+ Y+I G+ + + ++++ Q + L++SA D G
Sbjct: 982 LTVYVHDVNDNPPVFDQISYEVTLSESE--PVNSRFFKV-QASDKDSGANGEIAYTITDGNNGDAFGIFP---DGQLYIKSEL------DRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNY-TFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYAFEVTQPNFELHAV--TGEITSTHKFDRESLMRRRGTAVFSFTVTAMDRGLPQPLKD--QATVHVYMKDINDNAPKFLKDFYQ--------ATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEER--QFAIDSFSGQVTLVGKLDYEATSAYSLLIQAVDSGAIPLNSTCTLSI--DILDENDNTPSFPKSTLFVDVLENMRIGEL-VSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIPLGTSVISVTAHDPDADINGQLSYAII-QQMPRGNHFS---------IDEVKGTIYTSAEIDREFANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMFISQN--ALAADPSAMIGSVLTTIMAADPDEGANGEVEYEILNGDTDTFTVDRYSGDLRVASALVPSQLIYNLIVSATDLG 1607 HSP 7 Score: 169.859 bits (429), Expect = 7.022e-42 Identity = 193/693 (27.85%), Postives = 311/693 (44.88%), Query Frame = 2
Query: 602 VSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYE--------LILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSA-KDADYLANGKITYRIEDQKASEYFNIGNN-GNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIV-HVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSS-GKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGH-PNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLD-FGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKC-SNPLWVTIK 2611
VS + + + DINDN P + + S + E +L SR + A DPD N Q+ YF+K ++ +Y + E+ +V+ + V + I+ A D G+P + I +D NDN P F + KY+ +++N +G + V+A D D+ N ++ Y + D F + N+ G I + ++ D + F V A D G P + + V I V +EN PE H++ P E+ I SV+ + +D D ++S ++ + ++ + ++ S LA A D E S ++ I D + T S+ ++D NDNSP F F V+ENA + + A D D+ N+ I + + ++ F ID + G + T+ LD E + +++T+ A + D K V I++ N++ P F LY F +SE A GT+VG V A DRD+ A+ ++ Y I + S++ FQ I G+I LLDREK+ L V+A + G+ + TV I ++D ND P F S + +Q +E V G + V A D D S Y I GN G FS N Q ++ + S L ++ + L + A D G P S L VT++
Sbjct: 2856 VSTDVTIFVTDINDNTPRFSRPSYYLDCPELP--ELGSRVTQV-SATDPDEGSNGQVFYFIKSQS----------EYFRINATTGEIFNKQVLKYQNVSGFSNVNINRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFLQNKYFT-PVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSLVSDLN-QNFLIRVTAKDKGNPP---LSSQAVVHITVTEENYHTPEFSQNHISATIP--------ESHSI-GSVVRTVSARDRDTAMNGLISYNIISGNEEGIFAIN-SSTGVVTLAKA-LDYEMSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVI-HLNATDADSGANAVIAYTVQSSDSDLFVIDPNMGVITTQGFLDFETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAVGEVFASDRDMGADGEVHYLIFGN--SRKKGFQ---------INKMTGQIYVSGLLDREKEERVSLKVLAKNFGNIRGADIDEVTVNITVLDANDP-PVFSLS---TYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSINPQTGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLE 3503 HSP 8 Score: 162.925 bits (411), Expect = 1.106e-39 Identity = 197/758 (25.99%), Postives = 317/758 (41.82%), Query Frame = 2
Query: 356 IQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDN-GVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSP---KRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRD------IVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKS-MEKVDILC--KDQAY-NTASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSV-LSKQDDHKLVISACDKGKPP 2578
+ + E + G + +T ++ V+ Y I N I P T + + ++D E+ ++N + P + S+ +++ D NDN PS+P S E L + I + A DPD + N Q+ Y + + + ++ + ++K TS I DRE +++EL + A D P +R + I + D NDN P+F A S A IG V T+ A D D ANG++ Y I + + +G++ V + + + V A D PE + T E V++ +D + TK + E I VIS IE P G + IVS RL + Q AI DRE+ + + VD+ K A+ T + + D NDN P F T V EN + + ++ A+D D N+ + + +I + F+ID SG + + LDRE K+++ + A DG ++ + I + D+ND P FS +Y F I E+ G+ V + A D D N ++ Y + D + + + F + R LD E Q +Y+LTV A D G ++T NI+DVNDN P F S+ + S+ +G + D D G NS++ Y I G+ G F+ + L ++ Q + LVI D +PP
Sbjct: 1322 VDVLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNH-GTFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGR-PPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVE--NIPLGTSVISV-TAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEI--------DREFANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMFISQNALAADPS--AMIGSVLTTIMAADPDEGANGEVEYEILNGDTDTFTVDRYSGDLRVASALVPSQLI--YNLIVSATDLGPERRKSTTELTVILQGLDGP------VFTQTKYITILKEGEPIGTNVIS------IEAASPR--GSEAPVEYYIVSVRCEEKTVGRLFTIGRQTGVIQTAAI--LDREQGACLYLVDVYAIEKSSAFPRTQRAEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIM-QLTAMDADEGANALVTYALISGADDSFRIDPESGDLIATKRLDREHRSKYSLLVRADDG---LQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEISYVVEEDDGDGVFFLNLVTGV-FNLTR----------ALDYETQQYYILTVRAEDGG---GQSTTIRAYFNILDVNDNPPVFSMSSYST-SLMENLPLGSTVLVFNVTDADDGVNSQLSYSIASGDSLGQFAVDKHGVLKTLKALDRESQSFYNLVIQVHDLPQPP 2027 HSP 9 Score: 162.54 bits (410), Expect = 1.345e-39 Identity = 196/730 (26.85%), Postives = 320/730 (43.84%), Query Frame = 2
Query: 446 YRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKA-SEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGA-PEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDI----LCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSK--IEFQIIG--NEE----HFFQID-SSGKMYTKQVLDREETE-KFNVTILAKDGGDP-PKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVL--SKQDDHKLVISACDKG 2569
Y I GN+ ID + VT+ ++D E+ + + I P + +L+++ILD NDN PS+P+ + V E N + A D D N+ + Y + G ++G + I ++ + + K +D E +Y+L + A+D G P R+ ++ ++IQ+ D NDN P F + + EN +G ++V+A D D NG+++Y I Q +F+I G I ID + F+ +V A D A P E R+ V I+V D ND P I ++ L +P+ + SVL I DPD G V + N D D+ L +A+ + + + + L ++ +T +++ Q LD P FT+ + +L+ V++++ + R S+ +E+ I+ EE F I +G + T +LDRE+ + V + A + P+T V I + DIND P F + ++ EN G G+ + +TA+D D AN + Y +IS + +S+ I + G+++ LDRE +S Y L V A D +S + I I DVND+ P F ++ V+S E G + + A D D G N EI Y +EE + G F N L L Q + L + A D G
Sbjct: 1247 YSILKGNEERQ-FAIDSFSGQVTLVGKLDYEATSAYSLLIQAVDSGAI-PLNSTCTLSIDILDENDNTPSFPKSTLFVDVLE---NMRIGELVSSVTATDSDSGVNADLHYTI---TGSNNHGTFSISPNTGS-----IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIF-KSIVENIPLGTSVISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREF-ANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMFI----SQNALAADPS-----AMIGSVLTTIMAADPDEGANGEVEYEILNGDTDTFT----VDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVILQGLD----GPVFTQTKYITILKEGEPIGT---NVISIEAASPRGSEAPVEYYIVSVRCEEKTVGRLFTIGRQTGVIQTAAILDREQGACLYLVDVYAIEKSSAFPRTQRAEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISG--ADDSF----------RIDPESGDLIATKRLDREHRSKYSLLVRADDGLQ----SSDMRINITISDVNDHTPRF---SRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEISYVVEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTVRAEDGG 1922 HSP 10 Score: 152.91 bits (385), Expect = 1.158e-36 Identity = 189/690 (27.39%), Postives = 296/690 (42.90%), Query Frame = 2
Query: 593 PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEII--VHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQA---YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSL--PFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVG-YEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCSNPLWVTIKVVKQH 2626
P S + V +LDINDN P + Q V E N L I A D D N Q+ Y + N + + DS T + K +DRE Y L + A D GS RT S + I +LD ND P+F+ + Y N + L V A+D D N +++Y + F + +G + V +++D +A F V A D G+P TG + I+V D ND P +++T +I E+ VL + D D ++S S+ + Q + + QI+ A DRE K + ++ D ++S S++ I D NDN P+F + + + + P FV V D D NS++ + + G F ID G + L F+V + KDGG PKT + VT+ + D+ P+ F EN +GT V T+T S R SY+ S +L FQ I G++ LD EK Y++ + A D G P ++S + I ++D+NDN PTF+ + F + E++ +I TV A D D G N ++ Y+I GN F+ N ++ L ++ ++L + + DKG P + S + V I ++ ++
Sbjct: 2133 PLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKE---NILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTH-----QEFRIDSVTG---AITVAKSLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENLGTLPRAILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVTQSLDREA-RDHFVLVVTAADAGSPA---LTGTGTINIIVDDINDNVPTFANNMYLT---------SIAEDARTGTDVLL-VNASDADAAANAVISYSIIGGNS----QFTINPSTGQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVTITDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGSNSELHYSLSGRNSEKFHIDPLRGAIMAAGPLSGASEVTFSVHV--KDGGSFPKTDSTTVTVRFANKADF-PKVRAKEQTFMFPENQPVGTLVTTITG---------------SSLRGETLSYYIASGNLGDTFQ-IDPLTGQVSISQPLDFEKIQKYVVWIEARDGGFP-PFSSYEKLDITVLDINDNAPTFE---EDPFVSEILENLSPRKILTVSATDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIRPLDREKISHYELTVKSSDKGSPSQ-STSVKVIISILDEN 2769 HSP 11 Score: 149.828 bits (377), Expect = 9.490e-36 Identity = 185/691 (26.77%), Postives = 312/691 (45.15%), Query Frame = 2
Query: 605 SKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRT---IHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNG-SPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTAS--KSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ----------DDHKLVISACDKGKPPKCSNPLWVTIKVV 2617
+ ++N+ + DINDN P++ + S E ++RT + + A D D N+ I Y + N + + ST +++ ++DRE D Y L+++A D G + S +++ I D NDN P F Y + S FV V+ DAD +N ++ Y + + SE F+I G IM + +G FSV DG + KT V + ++ D P++ N+P I+ S L + +S +++ + Q+ P + I +F++ +K + V I +D + S + + +LD NDN+P F F +LEN S + V A DKD+ N +++++I+ GN+E F I+ ++G++ + + LDRE+ + +T+ + D G P ++ + V I ++D ND P FS ++ +SEN+ +G +V VT D D+ N +Y I+ +SLPF I + G+IV L+RE Y + V A D+G +T +T V I + D+NDN P F + + + E +G + V A D D G N ++ Y I+ + YF N ++ VL Q + H +++A D+G P S VTI V
Sbjct: 2347 TGTINIIVDDINDNVPTFANNMYLTSIAE------DARTGTDVLLVNASDADAAANAVISYSIIGGNS-------QFTINPSTG---QIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVTITDVNDNPPRFQHHPYVTHIPSPTPPGSFV-FAVTVTDADIGSNSELHYSLSGRN-SEKFHIDPLRGAIMAAGPL---SGASEVTFSVHVKDGG--SFPKTDSTTVTVRFANKAD-FPKVRAKEQTFMFPENQPVGTLVTTITGSSLRG-----------ETLSYYIASGNLGDTFQIDPLTGQVSISQPLDFEKIQKYV--VWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEILENLSPRKILT--VSATDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIRPLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFS-QIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSIV------------DTSLPF-TINPNTGDIVISRPLNREDTDRYRIRVSAHDSG----WTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELPE-LGSRVTQVSATDPDEGSNGQVFYFIKSQSE--YFRINATTGEIFNKQVLKYQNVSGFSNVNINRHSFIVTASDRGNPSLLSE-TTVTINTV 2976 HSP 12 Score: 137.887 bits (346), Expect = 4.815e-32 Identity = 161/638 (25.24%), Postives = 283/638 (44.36%), Query Frame = 2
Query: 446 YRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFI----SPSYVSKSL-NVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKD----QAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVP-NMFVGEVMAVDKDAERN-SKIEFQI-IGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTK-MKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDN 2317
Y + DGN L +D +T +++ + + + +N + ++R +P S+++ ++ + + N + P + Q + E RT+ A D D N I Y + N + G++ I +S++ + L K +D E +E+ + A D G RTG L + ++D NDN P+F +++ + ENA G + ++A DAD AN I Y ++ + + N G I + +D++ + + +V A + EE K V I + N+ P + + + + + + + D D G V + N + + Q++ QI DRE++ + +L K+ + + ++ +LD ND P + +RV + VP V V A D D+ + S+ + I GNE F I+ +G++ LDRE +N+T+LA D G P TG+ + + + DIND P ++S E + EN GT V T+ + D DLP N Y ++S +YF S++ G + T +DRE+ + + L+VV D+G P +ST TV I ++D NDN
Sbjct: 3023 YFVSDGNHL-GKFKLDNDTGWISIASSLVSD------LNQNFLIRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSVVRTV---SARDRDTAMNGLISYNIISGN---EEGIFAI---NSSTGVVTLA--KALDYEMSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVM-ENAPSGTTVIHLNATDADSGANAVIAYTVQSSDSDLFVIDPNMGVITTQGFLDFETK-QSYHLTVKAFNVPDEE--KCSFATVDIQLKGTNEYVPRFVSKLYYFE--------VSEAASRGTAVGEVFASDRDMGADGEVHYLIFGNSRKKGFQIN--KMTGQIYVSGLLDREKEERVSLKVLAKNFGNIRGADIDEVTVNITVLDAND--PPVFSLSTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSINPQTGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVLTVS--EGEVLENKRPGTLVMTLQSTDPDLPPNQGPFNYYLLSTG-PATNYFSLSTA----------GVLSTTREIDREQIADFYLSVVTRDSGAPQ-MSSTGTVHITVLDQNDN 3612 HSP 13 Score: 87.0409 bits (214), Expect = 1.406e-16 Identity = 131/539 (24.30%), Postives = 226/539 (41.93%), Query Frame = 2
Query: 383 GTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSW-PQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCS-----LSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERN-SKIEFQII--GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDIND 1963
G+ + ++ ++ ++ SY I GN+ I+ T VVT+ +D E +++ +++ + SL V ++D+NDN+P + P + T E + IH++ A D D N+ I Y ++ +D+ ++ I + + +D E Y L + A + ++ + IQ+ N+ P F YY ++SE A+ G V A D D A+G++ Y I + F I G I V +D + + VLA + E V I V+D ND P + T R I V + + + D D I S S + + ++ ++P + QI + DRE + + +L D T S S+V + D NDN P T V VLEN P V + + D D N + ++ G ++F + ++G + T + +DRE+ F ++++ +D G P + TG V I V+D ND
Sbjct: 3107 GSVVRTVSARDRDTAMNGLISYNIISGNEE-GIFAINSSTGVVTLAKALDYEMSSKHEMTISATDGGWVARTGYC-SLTVSVIDVNDNSPVFVPDE---FFPTVMENAPSGTTVIHLN-ATDADSGANAVIAYTVQ----SSDSDLFVIDPNMGV-----ITTQGFLDFETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYF-EVSEAASRGTAVGEVFASDRDMGADGEVHYLIFGNSRKKGFQINKMTGQIYVSGLLDREKEER-VSLKVLAKNFGNIRGADIDEVTVNITVLDAND--PPVFSLSTYR-------VQISEGVPIGTHVTFVSAFDSD----SIPSWSRFSYFIGSGNENGAFSINP--QTGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVLT-VSEGEVLENKR-PGTLVMTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLSTAGVLSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQND 3611 HSP 14 Score: 70.4774 bits (171), Expect = 1.634e-11 Identity = 78/262 (29.77%), Postives = 121/262 (46.18%), Query Frame = 2
Query: 338 SITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVST-SYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYV-SKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNEN-SQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRA-----KYYANKLSENANIGFVALTVSAKDADYL 1099
S++ ++QI E GT + ++ + ++I S S SY I GN+ I+P+T +TV + +DRESL N ++ +PS S SL V + DINDN P VS E NK + ++ DPD+ N +Y+L T+ ST+R IDREQ+ + L ++ D+G+P+ + + + I +LD+NDN P R YY N L +G +V +D D L
Sbjct: 3407 SLSTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNEN-GAFSINPQTGQITVTSGLDRESL--PVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVL-----TVSEGEVLENKRPGTLVMTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLSTAGVLSTTRE--------IDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDN-PSQSRTVEIFVNYYGN-LFPGGTLG----SVKPQDPDVL 3646
BLAST of Protocadherin 1b vs. UniProt/SwissProt
Match: sp|Q08174|PCDH1_HUMAN (Protocadherin-1 OS=Homo sapiens OX=9606 GN=PCDH1 PE=1 SV=2) HSP 1 Score: 271.937 bits (694), Expect = 2.152e-74 Identity = 220/738 (29.81%), Postives = 357/738 (48.37%), Query Frame = 2
Query: 482 LHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKY-DSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI----IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSP----SDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRE L C NQ+ D +L F +S + + ++ + +E+ DINDN P++ S V++ E + S I A D D N Y L+ G ++ ++ + ++ +L+ + +DRE+ D Y+L + +D GSP R S L + +LD NDN P F+R Y A +LSEN+ IG + V A D+D AN +I Y +A E N G I V+ +D + + +FSVLA D K+ +VV+ V D ND P I I VT +D + N I +V + +A ++V D D G V+C ++ + +L Q S S K++ + D E+ ++I+ D +++ S+ Q++D NDN+P FT+ + P + E+ A D D+ N+++ + + + F I +G++ K LDRE+ E + + ++A D G P GT V + V+D ND P+F LS Y FS+ EN + VG VT ID D N +++ + D +I++ G I++ DRE+QS Y + A+D G P ++ V IN++D NDN P + T + T ++ +G + V A D D G N+E++Y I GNPYG F + + + L + ++ H+LV+ D+GKPP+ L
Sbjct: 99 LRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNF--ASPVITLAIPENTNIGS-LFPIPLASDRDAGPNGVASYELQ--AGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEA-ELSENSPIGHSVIQVKANDSDQGANAEIEYTF--HQAPEVVRRLLRLDRNTGLITVQGPVDRE-DLSTLRFSVLAKDRGTNP--KSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMAN----ISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDF-------------VIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVP-PRSAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTAL 807
BLAST of Protocadherin 1b vs. UniProt/SwissProt
Match: sp|P33450|FAT_DROME (Cadherin-related tumor suppressor OS=Drosophila melanogaster OX=7227 GN=ft PE=1 SV=3) HSP 1 Score: 236.113 bits (601), Expect = 1.354e-61 Identity = 212/726 (29.20%), Postives = 345/726 (47.52%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYD--SSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQK-------ASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFG--GRDIVSCSLSNN-DKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQA--YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQM-IRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSN------KTVFSIQTTESVGYE--IGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILN----SVLSKQDDHKLVISACDKGK 2572
+DP T V +DRE + + + D+++ P+Y + + +++LD+NDN+P +P+ S +SF+E + + +D A D DV EN D + + G DN + S + + L +DRE Y+L + A D GSP R G L++ + ILD NDN PIFD + Y + L+E A G +TV A D D N KITY + + + + + N + N+ A K F+V A D G+P R+ G V + ++D ND P I P + A ++ ++ +V+A + VKD D G GR V N RLE+ + + I+ + DREE + ++ DQ T + ++ + D ND+ P F + + VL + FV + A D+D N+++ + I+ GNE +F +D +G + T LDRE + ++I A+DGG PK + + ++D ND P+FS ++ E+A T V +TA D D N + + + S E + P Q + G++ T+ LDREK S Y ++V+A D G P ++T TV +N+ DVNDN P F + I+ + V E + V A D D G+N+ I Y++E G G F + ++ + L + + + +KL++SA D G+
Sbjct: 105 LDPVTGEVKTNVVLDREGM---RDHYDLVV-LSSQPTYPIE-VRIKVLDVNDNSPEFPEPSIAISFSE---SATSGTRLLLDAATDADVGENGVTDQY-EIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVS-LNETALPGTPVVTVMASDNDLGDNSKITYYLAETEHQFTVNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSP---RQDGRTYVTVNLLDTNDHDPIISFRFF---PDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAA----DLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAP---SVERLY------PLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGE-GLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAGQ 800 HSP 2 Score: 194.512 bits (493), Expect = 1.559e-48 Identity = 215/761 (28.25%), Postives = 344/761 (45.20%), Query Frame = 2
Query: 476 NCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNV--EILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNG-------------------SPKR-----------------TGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITY-----RIEDQKASEYFNIGNN---GNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEK---SMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNM-FVGEVMAVDKDAE-RNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQ----NKKLILNSVLSKQDD--HKLVISACDKGK 2572
+ ++P+T ++T+ R+D E + + + PS +S ++ V +LD+NDNAP + S S FE + + + + A D D N I+Y + + ++ G+ DS+ + R + +DRE Y L + A D SP++ + ++++ I I D ND P+F A A + EN I V + V A D D NG I Y R ED S+ N G + V +D + + ++ A D G P + + E +++I ++DEND P DP ++ EN I VL + D D G + S+ D+ +S ++ N++R + ++ D ++ A +TA +I ILD NDN P F + RV+EN PN +V V A D D NS++ + + + F+I+ SSG + + LDRE+ ++ +T++A D G PP TGTG+V +EV DIND P F L Y ++ EN GT V T A D+D N K+++ ++ + + F I + GEI T LDRE+ S Y LT++A D+ S+ + I++ DVNDN P F + T +++ E + G + A+DLD GEN+ + Y I G YF NT+ + KL L + DD + +VISA D+G+
Sbjct: 1968 DVFSLNPQTGMLTLTARLDYEEV--QHYILIVQAQDNGQPS-LSTTITVYCNVLDLNDNAPIFDPMS--YSSEVFENVPIATEVVTV-SAKDIDSGNNGLIEYSITAGDVDSEFGI-----DSNGTIRTR----RNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANETA--IMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDREL-RSSYLLNITARDRGEPPQ---STESQLLIRILDENDNSPVF-------DPKQYSASVAENASIGAMVL-QVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTI--NILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHR---FH---------IDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKF---DSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHYTI-SGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGE 2681 HSP 3 Score: 189.119 bits (479), Expect = 6.518e-47 Identity = 199/726 (27.41%), Postives = 333/726 (45.87%), Query Frame = 2
Query: 344 TCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSL-NVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGV-WKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSP-KRTGSLELIIQIL--DKNDNGPIF--DRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVL---AHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIA-NFDRE----EKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLDFGENSEIVYQIEEGN 2461
+ ++ + E GTE+ + V+ + I GN+ + HID T + + +D E + +N I +PS + L NV ++D NDN P +P + V E G L++ + + A DPD N ++ Y + + + G + I ++ + ++ IDRE +D + L ++A D P +R S E ++ ++ D NDN P+F A K S + + V AKDAD +NG +TY I E F + N G I + V+ +Q ++ + D A + R++ E + I+ + + +R L+ ++ ENE I S+L AH+ + ++ V+ + + +++++ D + IL+ A DRE E +E I Q + +K + +LD+ND+ P+F F + V E+ + + + + A D D + F ++ G++ F S+GK+ LDRE K+ + I DG + TI+V D ND P F ++Y F I ENA G VG + A D DL N ++ Y ++SD ++ + + SL Q G + LD E+ HY+L V A DNG P S ++T TV N++D+NDN P F + +S + E+V E+ TV A D+D G N I Y I G+
Sbjct: 1387 SSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRR-DTFHIDSITGSLYLHKPLDYEDITSYTLN--ITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKE--GIPLKTPIVTV-TADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGV-----IHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIV-SGPQELFKLQRNTGIITFTPGPQFKQEVR-YQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSV-PQFEQRSKLSG--SVYENEPIGTSILTVTAHLASAEIEY----FVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTK-VRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHT-ISTLRAHDPDTL--GSVTFLLMDGHDGKFLLEPSTGKLILNDTLDRETKSKYELRIRVSDG---VQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSD-WANDVF-----SLNPQT-----GMLTLTARLDYEEVQHYILIVQAQDNGQP-SLSTTITVYCNVLDLNDNAPIF---DPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGD 2070 HSP 4 Score: 174.481 bits (441), Expect = 1.943e-42 Identity = 183/641 (28.55%), Postives = 293/641 (45.71%), Query Frame = 2
Query: 602 VSKSLNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRN----GKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGE-CEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNS----VLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPN-MFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGG-DPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSH----YLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEG 2458
+S ++ V IL D+ND P + ++ E + + I + KA D D N IDY +K+ G++D + + +L + +DRE Y L + A D G P ++ +L+I+ILD+NDN P+FD K Y+ ++ENA+IG + L VSA D D ANG+I Y I + F+I + G + V KN++Y+ + + +V A D A E G+ E+ I ++D ND +P + P ++EN V N + + P + ++D R+ S I + DRE++S + ++ D T + + ++ D NDN P F + +H V EN +P+ V A DKD N+K+ F ++G H F IDS +G++ T LDREET +++T++A+D P+ + +TI V D+ND P+F + Y ++ E G V A+D D N + Y IS R + YF I G + TK L + +SH Y + + A+D G S +S + + I+ + FPTF + F++ G I V A G +I Y I G
Sbjct: 2147 LSSTVKVTILIKDVNDEVPVFISANETAIM---ENVAINTVVIAV-KAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDG-----QLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFD-PKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYER-LSRYSLTVRAEDCALEN--PAGDTAELTINILDINDNRPTFL-----DSPYLAR--VMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLFRINASS-----GDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVREN--LPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHY-TISGR--DQHYFD---------INTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGE-QSLSSKAELTV-ILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGG 2746 HSP 5 Score: 169.088 bits (427), Expect = 9.038e-41 Identity = 186/703 (26.46%), Postives = 304/703 (43.24%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNG-SPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKG-----FQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNN---DKMRLEQVSPSDKEFQILAIA--NFDREEKSMEKVDILCKDQAYNT--ASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDF-GENSEIVYQIEEGNPYGYFSFNTQNKKLILNS---------VLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPP 2650
+ VE+ DINDN P + QS + E N + +A D D N+++ + L + + + DS T E+ +DRE+ VY L L+A+D+ + R S+ L I + D NDN P FD Y + E + G A D D N + Y I + YF+I N +V ++ K + + A+D + E V++ PE+ + N + +V ++ + P G + +++ D +R+ D +L++ D E + ++ I D + + I + D NDN+P + +++ VLE S P + + V A D+D+ N + +++ + + F+I SG++YT+ LDREE + + A D G P TGT V + ++D ND P+F+ L+ +++ENA IG+ V VT+ D DL AN Y FS+ ++ I G I LDRE+Q Y+L VVA D ++ + T + I I D NDN P F+ S + + +S+ +G + A D D G NS I Y +++ +P FS + ++ V S ++ + L + A D GKPP S L V I +V H N PP
Sbjct: 2477 VRVEVQDINDNDPVFELQSYHATVRE---NLPSGTHVLTPRATDKDEGLNAKLRFNLLGEH------MHRFHIDSETG---EISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNV-AVPERISKGEFVFGARALDLDDGENAVVHYTISG-RDQHYFDI-NTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTVIL-------RPPELFPTFAY---MANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGGIMGDSLRV------DPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEESPPQL-IAVVKASDRDSGDNGNVIYRLQNDFDGTFEITESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFT-RLFSLNVTENAEIGSFVIRVTSSDLDLGANANASY-----SFSENPGEKF-------RIEPQSGNITVAGHLDREQQDEYILKVVASD----GAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIAL-VGQIIATDRDKQGPNSVISYSLQQPSP--MFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECL-VNINIVDAH----NNPP 3122 HSP 6 Score: 165.622 bits (418), Expect = 1.220e-39 Identity = 202/744 (27.15%), Postives = 320/744 (43.01%), Query Frame = 2
Query: 488 IDPETHVVTVKN-----RIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSW---PQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNE-NSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNND---------------KMRLEQVSPSDKEFQ-ILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVF--HFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN-EEHFFQID-SSGKMYTKQ-VLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGT----VEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSK--QDDHKLVISACDKGKPPKCSNPLWVTIK 2611
I +T VV V R+ R SL +C + +P+ + L + ILDINDN P++ P ++V+ T N T++ A+D D NSQ+ YFLK+ D+ +++I S ++ +K +DREQ Y L L+A D GSP TG+ + +++ D NDN P+F+ Y+A + EN G LT A D D N K+ + + + + G I +D + + +++A D + E R + + I V D ND P K D T A+ E + + D D G +V ++S D K+ L+ + S + + I+ D+ E+S+ +SK+ + IL + P F + HF + E+ P + +V A KI + I G ++D +SG + Q LD E T + + I A DG P L+T+ V D ND P +Y + E + V A DRD N + YR+ +D + F+ + S GEI T+ LDRE+ Y V A+D G P+ T T +V ++++D NDN P F +FS+ TE+ EIG+ V + DLD G N+ Y E NP F Q+ + + L + QD++ L + A D + P+ +TI+
Sbjct: 2328 ISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALE-----NPAGDTAELTINILDINDNRPTFLDSPYLARVMENT-VPPNGGYVLTVN---AYDADTPPLNSQVRYFLKE----GDSDLFRINASSG-----DIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHAT-VRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHIDSETGEISTATTLDREE-TSVYHLTLMAQDSSITEPRAS-SVNLTISVSDVNDNIP-------KFDSTTYNVAVPE-RISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSL--------------SSKAELTVILRPPELFPTFAYMANSHFAMSEDVR-PGKMITKVSATSPKKGLVGKIRYAIAGGIMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDF---DGTFEITES----------GEIYTRMRLDREEIGDYAFVVEAVDQGVPH-MTGTASVLLHLLDKNDNPPKF----TRLFSLNVTENA--EIGSFVIRVTSSDLDLGANANASYSFSE-NPGEKFRIEPQSGNITVAGHLDREQQDEYILKVVASDGAW--RAETPITITIQ 3004 HSP 7 Score: 163.696 bits (413), Expect = 3.976e-39 Identity = 178/649 (27.43%), Postives = 279/649 (42.99%), Query Frame = 2
Query: 626 ILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVK--------GFQFSV--------------LAIDGAPEEYRKTGECEVVIMVIDENDEKPEII---VHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN---TASKSIVFQILDRNDNSPKFTRVF-HFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-IGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINII--DVNDNFPTFKTSNKTVFSIQTTESVGYEIGT--VEAVDLDFGENSEIVYQIEEG 2458
I D+ND+ P + S S E K+ +R + A D D+ +N +I Y + + N + GV+ Y L +DRE+ D Y L + D G P R+ + ++I ++D+NDN P F + + + + ENA ++A D D N ++++ + Q ++ F I NG I + D +A VK G S+ ++ +G P R + +V ++V D ND PE + HVT I + + H+ +D D G V SL+ ++ Q + Q+ DRE + + + ++ KD A +++ SI +LD NDN+P+FT+ VLE + + A D D NS++ F I GN F IDS +G +Y + LD E+ + + I A D G P + T L + VVD ND P F + I E + T + TVTA D D N K+ Y I + + +F I + G I T +DRE + LTVVA D P+ +T + +I D+NDN P F + N + + + S G V A D D N + Y+I G
Sbjct: 1039 IADVNDHTPVFDHTSYETSLPET--TKVNTRFFAL-AATDIDLGDNGRISYEIIEGNTERMFGVFPDGY---------LFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFS-IPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQ--TQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIP---RLQDKVKVKVIVTDVNDNAPEFLRAPYHVT-----------ISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEA--GQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELM-RFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFG---------INTETGVIHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSG 1646 HSP 8 Score: 162.54 bits (410), Expect = 9.301e-39 Identity = 188/722 (26.04%), Postives = 327/722 (45.29%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSY--VSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGN-KLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQV----DVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII--GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGH-PNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDF-GENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSN 2590
I+P++ +TV +DRE + +L+ S + + I D NDNAP + SF E + + L + I D+ NS I Y L+ + D +T ++ + V ++Y L ++A DNG P + I I+D ++N P F++A+Y A L ++A G + V A D L ++ Y + S F++G ++G I + K I + ++ V A D G P + + E VVI+V EN + P V+ + + + ENE + +++L + D D G ++ S+S ++ + S ++ I+ D + ++I +D Y+ S + I+ D NDN P F + +H + EN V FV + A DKD+ +N+ I + + G + HFF ++ S+G + + D EE + + I AK+ ++ L + V+ +N++ P+F ++ F +SE + +GT VG V A D+D + ++ Y ++ K ++ L + + RH LDRE Q+ +LTV+A + G + T V I+I D ND P F T +I VG ++ TV+A+D D +N++ Y I GN F + Q ++ S L +++ + LVI A D G PP+ +
Sbjct: 2959 FRIEPQSGNITVAGHLDREQ------QDEYILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRD---KQGPNSVISYSLQQPS-------PMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLA-PLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTR-YELVVRATDRGVPPQ---SDETRVVIVVTGENMDTPRFSVN-------SYQVIVPENEPVGSTILT-VGATDDDTGPNGMLRYSISGGNER--QDFSVDERTGGIVIQQQLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPV-GTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSMESYANLY-VHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIY-VARH----------LDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGNDP-PEFIKHYYTS-TISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGS 3634 HSP 9 Score: 156.762 bits (395), Expect = 5.670e-37 Identity = 196/744 (26.34%), Postives = 308/744 (41.40%), Query Frame = 2
Query: 473 LNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSS-TSRRIELMPIKVIDREQVDV-YELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANK---LSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMV--RKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQA--YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHD--RGEIVTKYLLD-------REKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVD-LDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLS--KQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIP 2638
++ HID ET ++ +DRE + P S +L + + D+NDN P + + V+ E + + +A D D EN+ + Y + R D + I + S ++EL K + D+ Y +++ A D G + EL + IL + P F Y AN +SE+ G + VSA GKI Y I + + N ++ + +DY+ ++ + A DG R + + V D ND P + + L ++E E ++A ++ D D G V L N+ E + +I DREE + DQ + T + S++ +LD+NDN PKFTR+F V ENA + FV V + D D N+ + N F+I+ SG + LDRE+ +++ + ++A DG +T +TI + D ND PEF S Y FS E VG + A DR D+ S YS P M D GE+ +K + R ++ Y LTV+A DNG P Y S V INI+D ++N P F+ + + + + G I V A D D G N E+ Y + N FS + + L + ++LV+ A D+G PP+ S+ V I V +++ P
Sbjct: 2535 MHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPE---RISKGEFVFGARALDLDDGENAVVHYTISGR----DQHYFDINTKTGVVSTKLEL---KTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTV-ILRPPELFPTF---AYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGGIMGDSLRVDPNSGLLSVGQDGLDYEL-THLYEIWIEAADGDTPSLRSV--TLITLNVTDANDNAPVM-------EQLIYNAEVLEEES-PPQLIAVVKASDRDSGDNGNVIYRLQNDFDGTFEIT----ESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRLFSLNVTENAEI-GSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDEYILKVVASDGAWRAETP---ITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDR--------------DKQGPNSVISYSLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLY-SECLVNINIVDAHNNPPKFEQA-EYLAPLPQDAVRGQRIVRVHANDKQDLGTN-EMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQ-SDETRVVIVVTGENMDTP 3227 HSP 10 Score: 154.836 bits (390), Expect = 2.261e-36 Identity = 189/761 (24.84%), Postives = 328/761 (43.10%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFT----------EFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKND-----------NGPIFDRAKYYANKLSENAN--IGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKT----GECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAII--ENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDR----EEKSMEKVDILCKDQAYNTASKSIVFQ--ILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDR--FSKESYFQYSSSL-PF------QMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSK--QDDHKLVISACDKGKPPKCSNPLWVTIKVVKQH 2626
+D T +T + +DRE + +I+ + +P + ++ + + D+NDN P + + + S E E ++ +H+ A D D +N+ I+Y L+ G++++ + S I L Y+L++ A D G +R + I++I+ K+ G F + + + + N +G V + K + AN I Y I ++ F I +G I + +D + ++ ++LA + + G+C V I +ID ND P V R+ +EP I EN + + V+D D G +S SL+NN + ++ P + + R E S+ V+++ D S + I D ND++P F + L + N + A D D N +I ++II GN E F + G ++ + LDREE + + +T+ +D G P ++ V I V+D ND P+F+ S + FSI ENA T VG +TA+DRD+ N ++ + + S F+ ++ + +L PF ++ R+ L ++ LL DNG P VK+ + DVNDN P F + V +I S G I V D D G N ++ Y + +GN G F+ ++ +L L L + Q+ H L++ A D S+ +TI V+ ++
Sbjct: 652 LDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERI---LLHV-TASDKDDGDNALIEYRLESGG----EGLFQLD---ARSGAISLRGDAPASMHWKPHYKLLVSARDAG--QRRSQQDAIVEIVLKSKLEMLECGQAQAGGYEFQMVEDHEQQRNSQPNREVGIVQV----KSTNGKANSHIEYDIIQGDRAQNFRIDTRSGRITTARPLDREEQAN-YRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAP---VFALDRE---SEPTISLPENAAVGQEIYLS-RVRDRDAGVNSRISYSLTNNPNQQF-RIGP------VTGVLYLQRPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFPDGYLFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPR-LQDKVKVKVIVTDVNDNAPEFLRAPYHV-TISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDEN 1378 HSP 11 Score: 152.14 bits (383), Expect = 1.474e-35 Identity = 200/767 (26.08%), Postives = 333/767 (43.42%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVS--KSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNG-----PIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKAS-------EYFNI-GNNGNIMVRKNIDYDAGVKGFQFSV--LAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAI--IENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEH-FFQIDSSGKMYTKQV-LDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNG-------------------HPNSYTST--------------TTVKINII--DVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEG--------NPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCS 2587
I+ ET V+ IDRES+ ++ R S +S K + V + DINDNAP + + + +F +K S + A D D + N + Y + +G + ++K++ ++ I P +E Y+L L + D S E+ I I+ G P F++ + + EN IG LTV+A +LA+ +I Y + + A+ F+I G + +D +AG + ++ V +A+ G P +T +V + V+D+ND P+ + + P + + ++ ++ + DPD G ++ K LE PS +++ DRE KS ++ I D T + + + Q+ D NDN P F V+ F + ENA VG+++A D D +N+++ + ++ + + F ++ M T LD EE + + + + A+D G P + T V V+D+ND P F Y + EN I T V TV+A D D N ++Y I + E F S+ G I T+ LDRE +S Y LTV A D P Y T +TVK+ I+ DVND P F ++N+T +I ++ + V+AVD D G N I Y ++E +P FS N + +L + L ++ + L I+A D+G+PP+ +
Sbjct: 1543 INTETGVIHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIV--SGPQE--LFKLQRNTGI---ITFTPGPQFKQEVR--YQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTA----HLASAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQP----RTSRTKVRVTVLDKNDSPPQFL----------DTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHDGKFLLE---PSTG--KLILNDTLDRETKSKYELRIRVSDGVQYTEAYATI-QVSDTNDNPPLFEDTVYSFDIPENAQR-GYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSE--FGIDSN----------GTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANET--AIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLP-FSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQST 2260 HSP 12 Score: 147.517 bits (371), Expect = 3.544e-34 Identity = 197/778 (25.32%), Postives = 338/778 (43.44%), Query Frame = 2
Query: 368 EEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNC-LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKS-LNVEILDINDNAPSWPQQ--SKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEY---FNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIV-HVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQI-----LDRNDNSPKFTRVFHFRVLENA-----SVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKT------GTGLVTIEVVDINDWKPEFSL---SLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQM-IRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF-KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNP---YGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCS 2587
E NGT + + ++ ++ TS RI GN+L + L + H+V V +DRE + + N ++ +P+ + + L +++ D+ND+ P + + S V+S G+ + S T A D D N+Q+ Y + N ++K+ S ++ +DRE D EL + A D G + +L + ILD+ND P F + + L E+A + ++A D D NG +T+ + Y F + G + R+ +D + + ++ SV+A D GAP T V + V D ND P+ H ++ ++ EV +L H+ D D G ++ L + + L Q+ + A K K+ + +D + + + +I L+ + + F+++E+ S PN VG V + + NS IE+ II G+ F+ID+ SG++ T + LDREE + +TILA G +V I ++D+ND P F+L S S+ ENA +G + DRD N+++ Y + ++ + + L Q IR + G ++ L+ A D G +S ++ + I DVND+ P F TS +T S+ T V + A D+D G+N I Y+I EGN +G F + L + + L ++ D + L +S D G+P + S
Sbjct: 398 ENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIVRVNGVLDREEI--GKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASIT-----ATDEDTGVNAQVHYDILSGN--------ELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVT-LGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREK-MSQYEISVIARDQGAPTPQSAT--ATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGE-GLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEIVLKSKLEMLECGQAQAGGYEFQMVEDHEQQRNSQPNREVGIVQVKSTNGKANSHIEYDIIQGDRAQNFRIDTRSGRITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNPNQQFRIGPVTGVLYLQRPIRAEPGSLIHVELM-------------ATDAGS-PPLSSKLSLSVLIADVNDHTPVFDHTSYET--SLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFP----DGYLFVRAPLDREERDYYALTVSCRDAGQPSRSS 1135 HSP 13 Score: 141.354 bits (355), Expect = 2.759e-32 Identity = 176/710 (24.79%), Postives = 309/710 (43.52%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCD-----------IMLRFFISPSYVSKS-LNVEILDINDNAP-----SWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNN-DKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNT---ASKSIVFQILDRNDNSPKF-TRVFHFRV--------LENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEK--FNVTILAKDGGDPPKTGTGLVTI------EVVDINDWKPEFSLSLYEFSISE------NAGIGTSVGTVTAIDRDLPANTKMKYRII-SDRFSKESYFQYSSSLPFQMIRHD--RGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTT-----VKINIIDVNDNFPTFKTSNKT--VFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQI 2449
++PET V++ R++ CP Q N + R SP ++ + V +LD ND+ P +P KV + E N + + D D N + + + N + + + + I + V+DRE++ Y L ++A D G+P RT + LII + D ND+ P+F++++Y A LSE A G +++A D D N ++ Y I ++F++ G I+ +D + + S+ A DG P K ++ ++++DENDE P+ ++R+ + + + +++A + D D G V+ +L+ + +++ Q + Q+ DRE+ S ++ ++ +DQ T A+ ++ + D NDN P+F R + + + L+ + V A DKD N+ IE+++ E FQ+D+ SG + + K + + + A+D G +V I E+++ + YEF + E N+ VG V + AN+ ++Y II DR Q R D G I T LDRE+Q++Y LT++A + ++ S+ + V I IID+NDN P F ++ S+ +VG EI D D G NS I Y +
Sbjct: 318 VNPETGVISTTERVN----CPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDE---NAVNGTVVAAVAVKDSDSGLNGRTSVRIV-----SGNELGHFRLEEAADLHI-VRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSA-VLSELAPTGSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREI-RDTVELSISARDGGPNP--KFAYTQLKVIILDENDEAPQF----SQRE----QNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEIVLKSKLEMLECGQAQ----AGGYEFQMVEDHEQQRNSQPNREVGIVQVKSTNGKANSHIEYDIIQGDR--------------AQNFRIDTRSGRITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSL 984 HSP 14 Score: 140.584 bits (353), Expect = 5.479e-32 Identity = 174/696 (25.00%), Postives = 302/696 (43.39%), Query Frame = 2
Query: 590 SPSYVSKSL-NVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKE-FQILAI----ANFDREEKSMEKVDILCKDQAYNTA-SKSIV-FQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG-NEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNG-HPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNE 2644
+PS S +L + + D NDNAP Q ++ E + + I + KA D D +N + Y L++ +G ++I R+ L DRE++ Y ++ A D G P TG+ +++ +LDKNDN P F R ++ ++ENA IG + V++ D D AN +Y + ++ +GNI V ++D + + + V+A DGA +R E + I + D+ND PE + P + ++ + ++A K G ++S SL M + P+ E F A+ + + R ++M + +L D S+ +V I+D ++N PKF + + L +V + V A DK +++++ ++ N F + G + + + ++ + + A D G PP++ V I V N P FS++ Y+ + EN +G+++ TV A D D N ++Y IS ++ + + G IV + LD + Y L + D G HP +S + I + DVNDN P F + I + VG + A D D +N+ I Y P +F Q+ I +S +S + + + + K K P S + + V H+L NE
Sbjct: 2787 TPSLRSVTLITLNVTDANDNAPVMEQ---LIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDF----DGTFEITESGEIYTRMRL------DREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTR--LFSLNVTENAEIGSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDE-YILKVVASDGA---WR--AETPITITIQDQNDNAPEFEHSFYS----FSFPELQQSIALVGQIIATDRDKQ---GPNSVISYSLQQPSPMF--SIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYS-ISGGNERQDF----------SVDERTGGIVIQQQLDYDLIQEYHLNITVQDLGYHP--LSSVAMLTIILTDVNDNPPVFNHKEYHCY-IPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTI-SSAVSFDYEERRIYTLQIKAKNPDSSMESYANLYV---HVLGVNE 3434 HSP 15 Score: 133.65 bits (335), Expect = 6.598e-30 Identity = 169/632 (26.74%), Postives = 278/632 (43.99%), Query Frame = 2
Query: 875 VIDREQV-DVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKI-TYRIEDQKASEYFNI-------GNNGNIMVRKNIDYDAGVKG-FQFSVLAIDG-APEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTAS-KSIVFQILDRNDNSPK----------------FTRVFHFR----------VLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMY---TKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF--KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGY---FSFNTQNKKLILNSVL--SKQDDHKLVISACDKGKP-PKCSNP-LWVTIKVV 2617
V+DRE + D Y+L+++ S + T +E+ I++LD NDN P F A SE+A G L +A DAD NG Y I F + G+ + + + D +G +Q ++ A DG +P + G +V + ++D ND P I H L NE A+ V++ + D D G ++ L+ + V+P E +++ + E+V+ + ++AS KS VF + R+ SP+ + FR V ENA V V V D D+ N + +I+ GNE F+++ + ++ VLDREE K+N+T++A D G P +T T + I+V D+ND +P F S Y +SE A G+ V ++TA D D N ++ Y I+S + ++ S P G IVT LDRE + L++ A D G PN + T +K+ I+D ND P F + N T+ +++ + + A D D G N + + + Y F+ + +L L K +++ + A D+G P P+ + +W+ + V
Sbjct: 117 VLDREGMRDHYDLVVL-----SSQPTYPIEVRIKVLDVNDNSPEFPEPSI-AISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRF---GYLQVNVTILDVNDNPP-IFDHSDYNVSL-NETALPGTPVVT------VMASDNDLGDNSKITYYLAETEHQF--TVNP---ETGVIS---------TTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENA-VNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDILSG-----NELKWFSMDPLT------GLIVTTGPLDREIRDTVELSISARDGG-PNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTI---VALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADV 701 HSP 16 Score: 129.413 bits (324), Expect = 1.352e-28 Identity = 147/554 (26.53%), Postives = 238/554 (42.96%), Query Frame = 2
Query: 719 TIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN--NGNIMVRKNIDYDAG-VKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFG--GRDIVSCSLSNNDK-MRLEQVSPSDKEFQILAIA-NFDREEKSMEKVDILCKD----QAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAE-RNSKIEFQII-GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTK-MKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKT 2335
TI A D D N + Y + N + D V + R ++ + +D + + Y L + +D G + L I + D NDN P+F+ +Y+ + EN +G A D D N I Y +F I N NG I + DY+ + Q D + E Y + + V+ N+ P+ + V D + E + V A ++ D D G GR S+NDK R+ D ++ +A + DRE ++ + ++ K+ + +T ++ I D ND P+F + ++ + A+ V V A+DKD +N++ + II GN + F+ID +G++ T LDREET +N+ I A D G PP+TG+ V IE+ D+ND P F+ ISEN GTS+ T+ A D DLP N Y++I + + + + G + + DRE + D+G P S + I ++D NDN T ++
Sbjct: 3247 TILTVGATDDDTGPNGMLRYSISGGNERQDFSVDE--------RTGGIVIQQQLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHC-YIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSMESY-----ANLYVHVLGVNEFYPQFLQPVFHFD-------VSETSAVGTRVGA-VQATDKDSGEDGRVYYLLVGSSNDKGFRI------DTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND-PPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKS-----------WLSVDRNSGVVRSTTSFDREMTPILEAIIEVEDSGKPKQ-KSQHLLTITVLDQNDNPSTTRS 3759 HSP 17 Score: 119.013 bits (297), Expect = 2.150e-25 Identity = 174/690 (25.22%), Postives = 302/690 (43.77%), Query Frame = 2
Query: 593 PSYVSKSLNVEILDINDNAPSW-PQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDY--FLKDRNG----KTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTG-SLELIIQILDKNDNGPIFDRAKYYANKLSENA---NIGFVALTVSAKDADYLA-NGKITYRIEDQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI-IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN---TASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-----SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFS-LSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTT--ESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPY-GYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKP 2575
P L + ILD NDN+P + P+Q S + E + + + + A D D N +I Y L D+N D GV ++ K ++ E++ Y L + AED G + EL I ILD NDN P F + Y A ++ EN N G+V LTV+A DAD N ++ Y +++ S+ F I ++G+I + K +D + + + +++A+D TG V + I++ND E+ H T R+ L + ++ D D G + +L R S + +I DREE S+ + ++ +D + +S ++ + D NDN PKF + ++ V E S FV A+D D N+ + + I G ++H+F I++ S K+ K + + + I A D G+ + +T+ ++ + P F+ ++ F++SE+ G + V+A K++Y I +S L V + LD E Y + + A D P S S T + +N+ D NDN P + + +++ + ES I V+A D D G+N ++Y+++ N + G F T++ ++ L +++ D+ V+ A D+G P
Sbjct: 2257 PQSTESQLLIRILDENDNSPVFDPKQ---YSASVAENASIGAMVLQV-SATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVA--------------KNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLA-RVMENTVPPNGGYV-LTVNAYDADTPPLNSQVRYFLKEGD-SDLFRINASSGDIALLKPLDREQQSE-YTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTP-----------RATDKDEGLNAKLRFNLLGEHMHRFHIDSETG---EISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERIS-KGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTV-ILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGGIMGDSLRVDPNSGL----------LSVGQDGLDYELTHLYEIWIEAADGDTP-SLRSVTLITLNVTDANDNAPVME---QLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQ--NDFDGTFEI-TESGEIYTRMRLDREEIGDYAFVVEAVDQGVP 2891 HSP 18 Score: 98.5969 bits (244), Expect = 2.855e-19 Identity = 98/364 (26.92%), Postives = 162/364 (44.51%), Query Frame = 2
Query: 1625 IVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKI-EFQII-GNEEHFFQIDSSG---------KMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHY---------LLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPT----FKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLI--LNSVLSKQD--DHKLVISACDKGKPPKCSNP-LWVTIKVVKQH 2626
+ ++LD NDNSP+F E+A+ + + A D D N +++I+ GN ++ F++ ++ + T LDRE + + I A+DGG PP+ G V + ++D+ND P F S Y S++E A GT V TV A D DL N+K+ Y + E+ Q++ + + G I T ++ +Q++ + TV A D+G P T V +N++D ND+ P F V ++ G + V D D G N +I GN G+F I +N VL +++ + L + A D+G P + + L + + V H
Sbjct: 142 VRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDA-ATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITY------YLAETEHQFT-------VNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQ-DGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDH 490 HSP 19 Score: 56.9954 bits (136), Expect = 1.608e-6 Identity = 54/198 (27.27%), Postives = 86/198 (43.43%), Query Frame = 2
Query: 443 SYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKL 1036
SY I +GN L ID +T ++ +R+DRE + + + P S ++++E+ D+NDN P++ + +E N+ +I A DPD+ N F G + +S R DRE + E I+ ED+G PK+ L I +LD+NDN P R+ + A L
Sbjct: 3582 SYSIINGN-LKQSFKIDVQTGEISTASRLDREETSTYNLVIG-AIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISE---NEPAGTSIMTLIASDPDLPRNG--GPFTYQLIGGKHKSWLSVDRNSGVVRS-----TTSFDREMTPILEAIIEVEDSGKPKQKSQHLLTITVLDQNDN-PSTTRSLHIAVSL 3766
BLAST of Protocadherin 1b vs. UniProt/SwissProt
Match: sp|Q9HC56|PCDH9_HUMAN (Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2) HSP 1 Score: 231.491 bits (589), Expect = 1.268e-60 Identity = 212/722 (29.36%), Postives = 335/722 (46.40%), Query Frame = 2
Query: 506 VVTVKNRIDRESLCPN-----QINCDIMLRFFISPSYVSKSLNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKA---SEYFNIGNN-GNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI-----------IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRII--SDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF--KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKP 2575
+ T NRIDRE LC + C L I P+ + + ++I+ D NDNAP +P S V++ + E + SR I A DPD N Y L NG++ G+ I + +L+ + +DREQ D Y + + ED G+P+++ + L + + D NDN P+F + + + ENA +G + + A DAD +N +I Y Q A F + N G I V++++D + + +VLA DG+ R T V I V D ND P I V+++++DP+ + A+I + KD D G+ V C + L+ V D ++ + + D E I+ D + +++ + ++ D NDN P F + V V EN +++ + A D+D+ +N+ I +Q+ G FF +D +G + +V DREE E+F T+ A+D G PP V + V+D ND P+F+ + ++F +SEN ++VG +T D D N + I+ +D F + Y G I + DRE+QS Y V A D G P +ST V IN++DVNDN P SN + + + G + V AVD+D G N+E+ Y I GN G F + + L + D H+LV++ D G P
Sbjct: 85 IFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFP--SPVINISIPENTLINSR-FPIPSATDPDTGFNGVQHYEL--LNGQSVFGL-DIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH-IPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAI-HKVTVLASDGSSTPARAT----VTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALIT-----------VSDKDTDVNGK--VICFIEREVPFHLKAVY--DNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRR-GLYLTTISATDEDSGKNADIVYQL-GPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPY---------------SGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYP 761
BLAST of Protocadherin 1b vs. UniProt/SwissProt
Match: sp|Q2PZL6|FAT4_MOUSE (Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.688e-60 Identity = 213/753 (28.29%), Postives = 350/753 (46.48%), Query Frame = 2
Query: 443 SYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYD-----SSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPD--FGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKD----------QAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQV---LDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSL-SLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHD--RGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPLWVTIKVV 2617
+YR+ + + L I+ T + IDRESL + +N ++ SP+Y ++ + V + D+NDNAP +P S VV+F E G+ R + +D A D D+ N + + +G N + + D S + L+ +DRE Y+L++ ED G PKR G L++ + + D NDN P+F + Y A + E+A +G L V+A DAD N I YR++D+ + + G I VR+ +D++A + + +V A D G P TG E I ++D ND P + + P T+ A ++ +V+A + V D D +I L N++ E ++ +A+ DRE + + D QA ++ + ++F + D ND+ P F + + L P +V V A D D+ N+ + + I+ GN +F I + T LDRE + + I A+D G PK + + V+D+ND KP FS YE S+ ENA GT + + A DRDL N +++ + + ++ R D G + T LDRE+Q+ Y L+++A D G P +ST V ++++D+NDN P F + IQ E G + TV A D D G N + Y I G+ F + ++ + L +++ ++L + A D G + N VT+ V+
Sbjct: 71 TYRLSESHALF---AINSSTGALYTTATIDRESLPSDVVNLVVLSS---SPTYPTE-VRVLVRDLNDNAPVFPDPSIVVTFKEDSGS---GRQVILDTATDSDIGSNGVDHHSYRIVSG---NEAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAG-VPEDAVVGSSVLQVAAADADEGTNADIRYRLQDE-GTPFQMDPETGLITVREPLDFEA-RRQYSLTVQATDRGVPS---LTGRAEAFIQLLDVNDNDPVVKF---RYFPATSRYASVDENAQVGTVVALLTVTDADSPAANGNISVQILGGNEQRHFEVQRSKVPNLSLIKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIF-VNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQ------------RLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLGSP-PQSSTAQVNVSLLDINDNSPVFYPV-QYFAHIQENEPGGSYVTTVSATDPDMGPNGTVKYSISAGD-RSRFQIHAKSGVISTKMALDREEKTAYQLQVVATDGGN-LQSPNQAIVTVTVL 784 HSP 2 Score: 213.001 bits (541), Expect = 2.833e-54 Identity = 202/736 (27.45%), Postives = 336/736 (45.65%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPS-----WPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKV---IDREQVDVYELILIAEDN-GSP------KRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFS---VLAIDGAPEE-YRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL--SNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKL-ILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKV 2614
+DPET ++TV+ +D E+ + R S + +++ +++LD+NDN P +P S+ S E + + A P N N + G + ++ S+ L IKV +DRE++ Y L + DN G+P R+ L+I + D ND+ P+F++ Y N LSE G VSA D D N + Y I +F+I + ++ AG + + VL I + + K ++V+ V+D NDEKP P E +++EN +L + D D G V SL + ND+ RL ++ P ++ DREE++ + IL D +++ + +LD NDNSP F V +F ++ +V V A D D N +++ I + FQI + SG + TK LDREE + + ++A DGG+ +VT+ V+D D P FS + Y F + EN +G VG+V+A DL AN + Y I + + F + G++ T ++DRE+QS Y L +VA + T T V I + D+NDN P F + +++ +++ ++ G+ I +AVD D G N ++Y +++ NP F+ N QN + +L ++ +++ I A D G P+ S+ + +T+ V
Sbjct: 296 FQMDPETGLITVREPLDFEARRQYSLTVQATDRGVPSLTGRAEAF-IQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDADSPAANGNISVQIL---------GGNEQRHFEVQRSKVPNLSLIKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQVYRVN-LSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTSA----AGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVF------SQPEGYEVSVVENAPTGTELLV-LGATDRDLGDNGTVRFSLQEAENDQ-RLFRLDPVSGRLS--TASSLDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSYVTTVSATDPDMGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSATTMDLNAN--ISYLITTG--DQRGMFAMNPV---------TGQLTTASVIDREEQSFYQLKIVA----SGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQA-GHSIFQAKAVDPDEGVNGRVLYSLKQ-NPKNLFTINEQNGNISLLGALDVHAGSYQVEIVASDMGV-PQLSSSILLTVYV 986 HSP 3 Score: 187.193 bits (474), Expect = 2.611e-46 Identity = 198/761 (26.02%), Postives = 330/761 (43.36%), Query Frame = 2
Query: 353 KIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRES---LCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPS-WPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSST-SRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREK------QSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVG--YEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPP 2578
++ + E GTE+ VL ++ + + + + + +DP + ++ + +DRE C + + D+ P + +NV +LDINDN+P +P Q F + N+ + A DPD+ N + Y + D ++I S S ++ L DRE+ Y+L ++A D G+ + + + +LD DN P+F +A Y + + EN +G+ +VSA D AN I+Y I F + G + ID + +Q ++A GA TG+ V I V D ND P + V + +EN +S+ + DPD G V SL N K + +++ I + D S + V+I+ D S SI+ + D NDN P F ++ + L + N +V A DKD+ N +I + I GN F I G++Y K LDRE +++ + ++A D P + T VT+ + D+ND +P F+ + Y F E G+ VG V+A+D+D N +++Y + + P + GEI + + DRE + + TV A+D G P TV + + D+NDN P F K + +E+ ++ V A D+D G N I Y I +GN F+ ++ + ++ L L + + L+I A D G P
Sbjct: 589 EVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLG----SPPQSSTAQVNVSLLDINDNSPVFYPVQY----FAHIQENEPGGSYVTTVSATDPDMGPNGTVKYSIS----AGDRSRFQIHAKSGVISTKMAL------DREEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAY-SFVVFENVALGYHVGSVSATTMDLNAN--ISYLITTGDQRGMFAMNPVTGQLTTASVIDREE-QSFYQLKIVASGGA-----VTGDTVVNITVKDLNDNAPHFLQAVESIN-------AVENWQAGHSIF-QAKAVDPDEGVNGRVLYSLKQNPKNLF---TINEQNGNISLLGALDVHAGSYQ-VEIVASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTITDGNNGDAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRY-------------AFEVTQPNFELHAVTGEITSTHKFDRESLMRRRGTAVFSFTVTAMDRGLPQPLKDQATVHVYMKDINDNAPKFL---KDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEERQFAIDSFSGQVTLVGKLDYEATSAYSLLIQAVDSGAIP 1294 HSP 4 Score: 187.193 bits (474), Expect = 2.796e-46 Identity = 197/674 (29.23%), Postives = 301/674 (44.66%), Query Frame = 2
Query: 626 ILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSP---KRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQV------SPSDKEFQILAIA-------NFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG-NEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPK 2581
ILD+NDN P + S S E N T+ + D D NSQ+ Y + + + + + D + L +K +DRE Y L++ D P + T + ++ I +LD NDN P+F K + EN I V A D D N I Y + + ++ F+IG +G + + +D + V + +V+A D G P T EVV+MV+D ND P + + +++K+ G DI+ S ++ND+ QV + +EF+I ++ + DRE + + D+ + T S ++ +LD ND P F + V EN + +V+A D D NS++ + ++G NE++ F + +SG++ Q LDRE + F + + A D G P TGTG + I V DIND P F+ ++Y SI+E+A GT V V A D D AN + Y II S F I G+I+T LLDRE + +Y L VVA D G P S +S+T+V + I DVNDN P F+ + V I + G + V D D G NSE+ Y + G F + ++ LS + + D G PK
Sbjct: 1934 ILDVNDNPPVFSMSSYSTSLME---NLPLGSTVLVFNVTDADDGVNSQLSYSIA-----SGDSLGQFAVD----KHGVLKTLKALDRESQSFYNLVIQVHDLPQPPTSRFTSTAQVSIILLDVNDNPPMFLSPKL--TYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPSGNK-FSIGTIDGEVHLTGELDREE-VSNYSLTVVATDKGQPPLSSST---EVVVMVLDINDNNP-----------------------VFAQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENLGTLPRAILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVTQSLDREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIAEDARTGTDVLLVNASDADAAANAVISYSII----GGNSQF---------TINPSTGQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVTITDVNDNPPRFQ-HHPYVTHIPSPTPPGSFVFAVTVTDADIGSNSELHYSL-SGRNSEKFHIDPLRGAIMAAGPLSGASEVTFSVHVKDGGSFPK 2550 HSP 5 Score: 185.652 bits (470), Expect = 6.977e-46 Identity = 192/710 (27.04%), Postives = 326/710 (45.92%), Query Frame = 2
Query: 353 KIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVS-KSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL-SNNDKMRLEQVSPSDKEFQILA---IANFDREEKSMEKVDILCKDQAYNT--ASKSIVFQILDRNDNSPKFTRVFHFR-VLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIE 2452
K Q F P+N ++T +++ + SY I GN L + IDP T V++ +D E + + I R P + S + L++ +LDINDNAP++ + V E L R I A D D N Q+DY + + N ++ + I + + E+ I+ +DRE++ YEL + + D GSP ++ S+++II ILD+NDN P F ++ ++ +SEN+ +G+ V+ D D N Y I D N N G+I++ + ++ + + ++ V A D T +V I V D ND P ++ + P + E S + + DPD G V + S ++ R+ + Q+L ++ F + + D+ + + ++ +D NDN P+F + +F V +N V + DKD NS++E+ + GN F++D+ +G + L + + F + + AKD G+PP + +V I V + N PEFS + +I E+ IG+ V TV+A DRD N + Y IIS ++E F +SS G + LD E S + +T+ A D G + T ++ +++IDVNDN P F ++ ++ G + + A D D G N+ I Y ++
Sbjct: 2572 KEQTFMFPENQPVGTLVTTITGSSLRGETLSYYIASGN-LGDTFQIDPLTGQVSISQPLDFEKI--QKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEILE----NLSPRKILTVSATDKDSGPNGQLDYEIVNGNQESS---FTINHATG-----EIRSIRPLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRF--SQIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSIVDTSLPFTIN-PNTGDIVISRPLNREDTDR-YRIRVSAHDSG-----WTVSTDVTIFVTDINDNTPRF----SRPSYYLDCPELPE----LGSRVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFLQNKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSLVSDLNQNFLIRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSVVRTVSARDRDTAMNGLISYNIISG--NEEGIFAINSS---------TGVVTLAKALDYEMSSKHEMTISATDGGW-VARTGYCSLTVSVIDVNDNSPVF-VPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAYTVQ 3236 HSP 6 Score: 182.956 bits (463), Expect = 5.062e-45 Identity = 187/668 (27.99%), Postives = 295/668 (44.16%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIE-DQKASEYFNIGNNGNIMVRKNIDYDA-----GVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY----NTASKSIVFQILDRNDNSPKFTRVFHF-RVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEH-FFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHP--NSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKG 2569
L V + D+NDN P + Q S V+ +E E + SR + +A D D N +I Y + D N G++ D + EL DRE D Y L+++A D + ++ + + + D NDN P+F+ Y E G VSA D D+ NG++ Y E Q E + G I D ++ G F F+V A+D G P+ + + V + + D ND P+ + + A + + + + + D D G ++ S+ ++ R Q + Q+ + D E S + I D +T + SI ILD NDN+P F + F VLEN + + V V A D D+ N+ + + I G+ H F I ++G ++ + LD E + + I AKD G PP++ T V I+V D ND P F SI EN +GTSV +VTA D D N ++ Y II + + ++F I +G I T +DRE + + LTV A D P + V I + D+NDN P F + N + + +G + T+ A D D G N E+ Y+I G+ + + ++++ Q + L++SA D G
Sbjct: 982 LTVYVHDVNDNPPVFDQISYEVTLSESE--PVNSRFFKV-QASDKDSGANGEIAYTITDGNNGDAFGIFP---DGQLYIKSEL------DRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNY-TFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYAFEVTQPNFELHAV--TGEITSTHKFDRESLMRRRGTAVFSFTVTAMDRGLPQPLKD--QATVHVYMKDINDNAPKFLKDFYQ--------ATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEER--QFAIDSFSGQVTLVGKLDYEATSAYSLLIQAVDSGAIPLNSTCTLSI--DILDENDNTPSFPKSTLFVDVLENMRIGEL-VSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIPLGTSVISVTAHDPDADINGQLSYAII-QQMPRGNHFS---------IDEVKGTIYTSAEIDREFANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMFISQN--ALAADPSAMIGSVLTTIMAADPDEGANGEVEYEILNGDTDTFTVDRYSGDLRVASALVPSQLIYNLIVSATDLG 1607 HSP 7 Score: 169.859 bits (429), Expect = 4.912e-41 Identity = 193/693 (27.85%), Postives = 311/693 (44.88%), Query Frame = 2
Query: 602 VSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYE--------LILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSA-KDADYLANGKITYRIEDQKASEYFNIGNN-GNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIV-HVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSS-GKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGH-PNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLD-FGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKC-SNPLWVTIK 2611
VS + + + DINDN P + + S + E +L SR + A DPD N Q+ YF+K ++ +Y + E+ +V+ + V + I+ A D G+P + I +D NDN P F + KY+ +++N +G + V+A D D+ N ++ Y + D F + N+ G I + ++ D + F V A D G P + + V I V +EN PE H++ P E+ I SV+ + +D D ++S ++ + ++ + ++ S LA A D E S ++ I D + T S+ ++D NDNSP F F V+ENA + + A D D+ N+ I + + ++ F ID + G + T+ LD E + +++T+ A + D K V I++ N++ P F LY F +SE A GT+VG V A DRD+ A+ ++ Y I + S++ FQ I G+I LLDREK+ L V+A + G+ + TV I ++D ND P F S + +Q +E V G + V A D D S Y I GN G FS N Q ++ + S L ++ + L + A D G P S L VT++
Sbjct: 2856 VSTDVTIFVTDINDNTPRFSRPSYYLDCPELP--ELGSRVTQV-SATDPDEGSNGQVFYFIKSQS----------EYFRINATTGEIFNKQVLKYQNVSGFSNVNINRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFLQNKYFT-PVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSLVSDLN-QNFLIRVTAKDKGNPP---LSSQAVVHITVTEENYHTPEFSQNHISATIP--------ESHSI-GSVVRTVSARDRDTAMNGLISYNIISGNEEGIFAIN-SSTGVVTLAKA-LDYEMSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVI-HLNATDADSGANAVIAYTVQSSDSDLFVIDPNMGVITTQGFLDFETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAVGEVFASDRDMGADGEVHYLIFGN--SRKKGFQ---------INKMTGQIYVSGLLDREKEERVSLKVLAKNFGNIRGADIDEVTVNITVLDANDP-PVFSLS---TYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSINPQTGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLE 3503 HSP 8 Score: 162.925 bits (411), Expect = 7.739e-39 Identity = 197/758 (25.99%), Postives = 317/758 (41.82%), Query Frame = 2
Query: 356 IQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDN-GVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSP---KRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRD------IVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKS-MEKVDILC--KDQAY-NTASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSV-LSKQDDHKLVISACDKGKPP 2578
+ + E + G + +T ++ V+ Y I N I P T + + ++D E+ ++N + P + S+ +++ D NDN PS+P S E L + I + A DPD + N Q+ Y + + + ++ + ++K TS I DRE +++EL + A D P +R + I + D NDN P+F A S A IG V T+ A D D ANG++ Y I + + +G++ V + + + V A D PE + T E V++ +D + TK + E I VIS IE P G + IVS RL + Q AI DRE+ + + VD+ K A+ T + + D NDN P F T V EN + + ++ A+D D N+ + + +I + F+ID SG + + LDRE K+++ + A DG ++ + I + D+ND P FS +Y F I E+ G+ V + A D D N ++ Y + D + + + F + R LD E Q +Y+LTV A D G ++T NI+DVNDN P F S+ + S+ +G + D D G NS++ Y I G+ G F+ + L ++ Q + LVI D +PP
Sbjct: 1322 VDVLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNH-GTFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGR-PPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVE--NIPLGTSVISV-TAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEI--------DREFANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMFISQNALAADPS--AMIGSVLTTIMAADPDEGANGEVEYEILNGDTDTFTVDRYSGDLRVASALVPSQLI--YNLIVSATDLGPERRKSTTELTVILQGLDGP------VFTQTKYITILKEGEPIGTNVIS------IEAASPR--GSEAPVEYYIVSVRCEEKTVGRLFTIGRQTGVIQTAAI--LDREQGACLYLVDVYAIEKSSAFPRTQRAEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIM-QLTAMDADEGANALVTYALISGADDSFRIDPESGDLIATKRLDREHRSKYSLLVRADDG---LQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEISYVVEEDDGDGVFFLNLVTGV-FNLTR----------ALDYETQQYYILTVRAEDGG---GQSTTIRAYFNILDVNDNPPVFSMSSYST-SLMENLPLGSTVLVFNVTDADDGVNSQLSYSIASGDSLGQFAVDKHGVLKTLKALDRESQSFYNLVIQVHDLPQPP 2027 HSP 9 Score: 162.54 bits (410), Expect = 9.410e-39 Identity = 196/730 (26.85%), Postives = 320/730 (43.84%), Query Frame = 2
Query: 446 YRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKA-SEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGA-PEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDI----LCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSK--IEFQIIG--NEE----HFFQID-SSGKMYTKQVLDREETE-KFNVTILAKDGGDP-PKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVL--SKQDDHKLVISACDKG 2569
Y I GN+ ID + VT+ ++D E+ + + I P + +L+++ILD NDN PS+P+ + V E N + A D D N+ + Y + G ++G + I ++ + + K +D E +Y+L + A+D G P R+ ++ ++IQ+ D NDN P F + + EN +G ++V+A D D NG+++Y I Q +F+I G I ID + F+ +V A D A P E R+ V I+V D ND P I ++ L +P+ + SVL I DPD G V + N D D+ L +A+ + + + + L ++ +T +++ Q LD P FT+ + +L+ V++++ + R S+ +E+ I+ EE F I +G + T +LDRE+ + V + A + P+T V I + DIND P F + ++ EN G G+ + +TA+D D AN + Y +IS + +S+ I + G+++ LDRE +S Y L V A D +S + I I DVND+ P F ++ V+S E G + + A D D G N EI Y +EE + G F N L L Q + L + A D G
Sbjct: 1247 YSILKGNEERQ-FAIDSFSGQVTLVGKLDYEATSAYSLLIQAVDSGAI-PLNSTCTLSIDILDENDNTPSFPKSTLFVDVLE---NMRIGELVSSVTATDSDSGVNADLHYTI---TGSNNHGTFSISPNTGS-----IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIF-KSIVENIPLGTSVISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREF-ANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMFI----SQNALAADPS-----AMIGSVLTTIMAADPDEGANGEVEYEILNGDTDTFT----VDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVILQGLD----GPVFTQTKYITILKEGEPIGT---NVISIEAASPRGSEAPVEYYIVSVRCEEKTVGRLFTIGRQTGVIQTAAILDREQGACLYLVDVYAIEKSSAFPRTQRAEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISG--ADDSF----------RIDPESGDLIATKRLDREHRSKYSLLVRADDGLQ----SSDMRINITISDVNDHTPRF---SRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEISYVVEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTVRAEDGG 1922 HSP 10 Score: 152.91 bits (385), Expect = 8.102e-36 Identity = 189/690 (27.39%), Postives = 296/690 (42.90%), Query Frame = 2
Query: 593 PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEII--VHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQA---YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSL--PFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVG-YEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCSNPLWVTIKVVKQH 2626
P S + V +LDINDN P + Q V E N L I A D D N Q+ Y + N + + DS T + K +DRE Y L + A D GS RT S + I +LD ND P+F+ + Y N + L V A+D D N +++Y + F + +G + V +++D +A F V A D G+P TG + I+V D ND P +++T +I E+ VL + D D ++S S+ + Q + + QI+ A DRE K + ++ D ++S S++ I D NDN P+F + + + + P FV V D D NS++ + + G F ID G + L F+V + KDGG PKT + VT+ + D+ P+ F EN +GT V T+T S R SY+ S +L FQ I G++ LD EK Y++ + A D G P ++S + I ++D+NDN PTF+ + F + E++ +I TV A D D G N ++ Y+I GN F+ N ++ L ++ ++L + + DKG P + S + V I ++ ++
Sbjct: 2133 PLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKE---NILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTH-----QEFRIDSVTG---AITVAKSLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENLGTLPRAILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVTQSLDREA-RDHFVLVVTAADAGSPA---LTGTGTINIIVDDINDNVPTFANNMYLT---------SIAEDARTGTDVLL-VNASDADAAANAVISYSIIGGNS----QFTINPSTGQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVTITDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGSNSELHYSLSGRNSEKFHIDPLRGAIMAAGPLSGASEVTFSVHV--KDGGSFPKTDSTTVTVRFANKADF-PKVRAKEQTFMFPENQPVGTLVTTITG---------------SSLRGETLSYYIASGNLGDTFQ-IDPLTGQVSISQPLDFEKIQKYVVWIEARDGGFP-PFSSYEKLDITVLDINDNAPTFE---EDPFVSEILENLSPRKILTVSATDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIRPLDREKISHYELTVKSSDKGSPSQ-STSVKVIISILDEN 2769 HSP 11 Score: 149.828 bits (377), Expect = 6.638e-35 Identity = 185/691 (26.77%), Postives = 312/691 (45.15%), Query Frame = 2
Query: 605 SKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRT---IHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNG-SPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTAS--KSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ----------DDHKLVISACDKGKPPKCSNPLWVTIKVV 2617
+ ++N+ + DINDN P++ + S E ++RT + + A D D N+ I Y + N + + ST +++ ++DRE D Y L+++A D G + S +++ I D NDN P F Y + S FV V+ DAD +N ++ Y + + SE F+I G IM + +G FSV DG + KT V + ++ D P++ N+P I+ S L + +S +++ + Q+ P + I +F++ +K + V I +D + S + + +LD NDN+P F F +LEN S + V A DKD+ N +++++I+ GN+E F I+ ++G++ + + LDRE+ + +T+ + D G P ++ + V I ++D ND P FS ++ +SEN+ +G +V VT D D+ N +Y I+ +SLPF I + G+IV L+RE Y + V A D+G +T +T V I + D+NDN P F + + + E +G + V A D D G N ++ Y I+ + YF N ++ VL Q + H +++A D+G P S VTI V
Sbjct: 2347 TGTINIIVDDINDNVPTFANNMYLTSIAE------DARTGTDVLLVNASDADAAANAVISYSIIGGNS-------QFTINPSTG---QIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVTITDVNDNPPRFQHHPYVTHIPSPTPPGSFV-FAVTVTDADIGSNSELHYSLSGRN-SEKFHIDPLRGAIMAAGPL---SGASEVTFSVHVKDGG--SFPKTDSTTVTVRFANKAD-FPKVRAKEQTFMFPENQPVGTLVTTITGSSLRG-----------ETLSYYIASGNLGDTFQIDPLTGQVSISQPLDFEKIQKYV--VWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEILENLSPRKILT--VSATDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIRPLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFS-QIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSIV------------DTSLPF-TINPNTGDIVISRPLNREDTDRYRIRVSAHDSG----WTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELPE-LGSRVTQVSATDPDEGSNGQVFYFIKSQSE--YFRINATTGEIFNKQVLKYQNVSGFSNVNINRHSFIVTASDRGNPSLLSE-TTVTINTV 2976 HSP 12 Score: 137.887 bits (346), Expect = 3.368e-31 Identity = 161/638 (25.24%), Postives = 283/638 (44.36%), Query Frame = 2
Query: 446 YRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFI----SPSYVSKSL-NVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKD----QAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVP-NMFVGEVMAVDKDAERN-SKIEFQI-IGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTK-MKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDN 2317
Y + DGN L +D +T +++ + + + +N + ++R +P S+++ ++ + + N + P + Q + E RT+ A D D N I Y + N + G++ I +S++ + L K +D E +E+ + A D G RTG L + ++D NDN P+F +++ + ENA G + ++A DAD AN I Y ++ + + N G I + +D++ + + +V A + EE K V I + N+ P + + + + + + + D D G V + N + + Q++ QI DRE++ + +L K+ + + ++ +LD ND P + +RV + VP V V A D D+ + S+ + I GNE F I+ +G++ LDRE +N+T+LA D G P TG+ + + + DIND P ++S E + EN GT V T+ + D DLP N Y ++S +YF S++ G + T +DRE+ + + L+VV D+G P +ST TV I ++D NDN
Sbjct: 3023 YFVSDGNHL-GKFKLDNDTGWISIASSLVSD------LNQNFLIRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSVVRTV---SARDRDTAMNGLISYNIISGN---EEGIFAI---NSSTGVVTLA--KALDYEMSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVM-ENAPSGTTVIHLNATDADSGANAVIAYTVQSSDSDLFVIDPNMGVITTQGFLDFETK-QSYHLTVKAFNVPDEE--KCSFATVDIQLKGTNEYVPRFVSKLYYFE--------VSEAASRGTAVGEVFASDRDMGADGEVHYLIFGNSRKKGFQIN--KMTGQIYVSGLLDREKEERVSLKVLAKNFGNIRGADIDEVTVNITVLDAND--PPVFSLSTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSINPQTGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVLTVS--EGEVLENKRPGTLVMTLQSTDPDLPPNQGPFNYYLLSTG-PATNYFSLSTA----------GVLSTTREIDREQIADFYLSVVTRDSGAPQ-MSSTGTVHITVLDQNDN 3612 HSP 13 Score: 87.0409 bits (214), Expect = 9.833e-16 Identity = 131/539 (24.30%), Postives = 226/539 (41.93%), Query Frame = 2
Query: 383 GTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSW-PQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCS-----LSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERN-SKIEFQII--GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDIND 1963
G+ + ++ ++ ++ SY I GN+ I+ T VVT+ +D E +++ +++ + SL V ++D+NDN+P + P + T E + IH++ A D D N+ I Y ++ +D+ ++ I + + +D E Y L + A + ++ + IQ+ N+ P F YY ++SE A+ G V A D D A+G++ Y I + F I G I V +D + + VLA + E V I V+D ND P + T R I V + + + D D I S S + + ++ ++P + QI + DRE + + +L D T S S+V + D NDN P T V VLEN P V + + D D N + ++ G ++F + ++G + T + +DRE+ F ++++ +D G P + TG V I V+D ND
Sbjct: 3107 GSVVRTVSARDRDTAMNGLISYNIISGNEE-GIFAINSSTGVVTLAKALDYEMSSKHEMTISATDGGWVARTGYC-SLTVSVIDVNDNSPVFVPDE---FFPTVMENAPSGTTVIHLN-ATDADSGANAVIAYTVQ----SSDSDLFVIDPNMGV-----ITTQGFLDFETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYF-EVSEAASRGTAVGEVFASDRDMGADGEVHYLIFGNSRKKGFQINKMTGQIYVSGLLDREKEER-VSLKVLAKNFGNIRGADIDEVTVNITVLDAND--PPVFSLSTYR-------VQISEGVPIGTHVTFVSAFDSD----SIPSWSRFSYFIGSGNENGAFSINP--QTGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVLT-VSEGEVLENKR-PGTLVMTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLSTAGVLSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQND 3611 HSP 14 Score: 70.4774 bits (171), Expect = 1.143e-10 Identity = 78/262 (29.77%), Postives = 121/262 (46.18%), Query Frame = 2
Query: 338 SITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVST-SYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYV-SKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNEN-SQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRA-----KYYANKLSENANIGFVALTVSAKDADYL 1099
S++ ++QI E GT + ++ + ++I S S SY I GN+ I+P+T +TV + +DRESL N ++ +PS S SL V + DINDN P VS E NK + ++ DPD+ N +Y+L T+ ST+R IDREQ+ + L ++ D+G+P+ + + + I +LD+NDN P R YY N L +G +V +D D L
Sbjct: 3407 SLSTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNEN-GAFSINPQTGQITVTSGLDRESL--PVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVL-----TVSEGEVLENKRPGTLVMTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLSTAGVLSTTRE--------IDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDN-PSQSRTVEIFVNYYGN-LFPGGTLG----SVKPQDPDVL 3646
BLAST of Protocadherin 1b vs. UniProt/SwissProt
Match: sp|Q5DRE1|PCDC2_PANTR (Protocadherin alpha-C2 OS=Pan troglodytes OX=9598 GN=PCDHAC2 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 6.601e-60 Identity = 174/630 (27.62%), Postives = 295/630 (46.83%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIE---DQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-------SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGI---------GTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIID 2305
L +D + + V RIDRE+LC + C + L ++ VEILDINDN+P +P+ + + +E + HI+ A DPDV NS Y L +++ +K S+ +EL+ K +DREQ ++ L+L A D G P R+G+ ++ +++LD NDN P FD++ Y +L E++ G + + ++A D D +NG++ Y + + + F+I + G + V +DY+ +Q V A D P G C+V++ ++D ND PE++ LT+ + + N+++A + V D D G VS L RL S + ++ DRE ++ + + D T+ +++ +I D NDN P F + ++ ++P + + V A D D + N+++ + ++ E + S SG +Y D E+ +F VT+ A+D G+PP + TG + VVD+ND P LY S + +A G V V A+D D N + Y + +S L + GEI T + E S + LTVV DNG P S +++ + + ++D
Sbjct: 90 LELDLTSGALFVNERIDREALCEQRPRCLLSLEVLAHNPVAVSAVEVEILDINDNSPRFPRPNYQLQVSE---SVAPGARFHIESAQDPDVGANSVQTYELS----PSEHFELDLKPLQENSKVLELVLRKGLDREQAALHHLVLTAVDGGIPARSGTAQISVRVLDTNDNSPAFDQSTYRV-QLREDSPPGTLVVKLNASDPDEGSNGELRYSLSSYTSDRERQLFSIDASTGEVRVIGGLDYEE-ASSYQIYVQATDRGP--VPMAGHCKVLVDIVDVNDNAPEVV--------LTDLYSPVPENATPNTIVAVLSVNDQDSGPNRKVSLGLEATLPFRLNGFGNS---YTLVVSGPLDRERVAVYNITVTATDGGIPQLTSLRTLKVEISDINDNPPSFLEDSYSIYIQENNLPGVLLCTVQATDPDEKENAEVTYSLLEREIQGLPVTSYVSINSASGSLYAVNSFDYEKFREFFVTVEAQDKGNPPLSSTGTANVYVVDMNDHAPHI---LYPSSTNSSAAFEMGPRTAPAGYLVTKVIAMDSDSGQNAWLFY-----------HLAQTSDLDLFKVELHTGEIRTTRKMGDESGSTFNLTVVVRDNGEP-SLSASVAITVAVVD 682 HSP 2 Score: 143.28 bits (360), Expect = 2.817e-33 Identity = 150/573 (26.18%), Postives = 244/573 (42.58%), Query Frame = 2
Query: 968 IQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-----NNGNIM---VRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEF-QILAIANFDREEKSMEKVDILCKDQAYNTASK--SIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHF-FQIDSSGKMYTKQV---LDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF----KTSNKTVFSIQT-TESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHK--LVISACDKGKPPKCSNPLWVTIKVV 2617
++ILD NDN P F R Y ++SE+ G SA+D D AN TY + SE+F + N ++ +RK +D + + A+DG ++G ++ + V+D ND P + + P +++ + DPD G + SLS+ R Q+ D ++ I D EE S ++ + D+ + ++ I+D NDN+P+ + V ENA+ PN V + D+D+ N K+ +G E F+++ G YT V LDRE +N+T+ A DGG P T + +E+ DIND P F Y I EN G + TV A D D N ++ Y ++ Y S I G + D EK + +TV A D G+P +ST T + ++D+ND+ P T++ F + T GY + V A+D D G+N+ + Y + + + F ++ + + L + D G+ P S + +T+ VV
Sbjct: 136 VEILDINDNSPRFPRPNYQL-QVSESVAPGARFHIESAQDPDVGANSVQTYEL---SPSEHFELDLKPLQENSKVLELVLRKGLDREQAAL-HHLVLTAVDGGIPA--RSGTAQISVRVLDTNDNSPAFDQSTYRVQLREDSPP--------GTLVVKLNASDPDEGSNGELRYSLSSYTSDRERQLFSIDASTGEVRVIGGLDYEEASSYQIYVQATDRGPVPMAGHCKVLVDIVDVNDNAPEVVLTDLYSPVPENAT-PNTIVAVLSVNDQDSGPNRKVS---LGLEATLPFRLNGFGNSYTLVVSGPLDRERVAVYNITVTATDGGIPQLTSLRTLKVEISDINDNPPSFLEDSYSIYIQENNLPGVLLCTVQATDPDEKENAEVTYSLLEREIQGLPVTSYVS------INSASGSLYAVNSFDYEKFREFFVTVEAQDKGNP-PLSSTGTANVYVVDMNDHAPHILYPSSTNSSAAFEMGPRTAPAGYLVTKVIAMDSDSGQNAWLFYHLAQTSDLDLFKVELHTGEIRTTRKMGDESGSTFNLTVVVRDNGE-PSLSASVAITVAVV 681 HSP 3 Score: 140.198 bits (352), Expect = 2.589e-32 Identity = 140/514 (27.24%), Postives = 233/514 (45.33%), Query Frame = 2
Query: 1166 NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIE-VKDPDFGGRDIVSCSLSNND--KMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQA--YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG----NEEHFFQIDSS-GKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRG-EIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEE----GNPY-GYFSFNTQNKKL-ILNSV-LSKQDDHKLVISACDKGKPPKCS----NPLWVTIKVVKQHILIPN 2641
+G + V + ID +A + +L+++ EV I+ I++N + R P N + +E ++ HIE +DPD G + + LS ++ ++ L+ + + K +++ DRE+ ++ + + D + + I ++LD NDNSP F + + L S P V ++ A D D N ++ + + E F ID+S G++ LD EE + + + A D G P G V +++VD+ND PE L+ + ENA T V ++ D+D N K+ + ++LPF++ +V LDRE+ + Y +TV A D G P TS T+K+ I D+NDN P+F + +++ IQ G + TV+A D D EN+E+ Y + E G P Y S N+ + L +NS K + + + A DKG PP S N V + HIL P+
Sbjct: 96 SGALFVNERIDREALCEQRPRCLLSLEVLAHNPVAVSAVEVEILDINDN----------SPRFPRPNYQLQV-SESVAPGARFHIESAQDPDVGANSVQTYELSPSEHFELDLKPLQENSKVLELVLRKGLDREQAALHHLVLTAVDGGIPARSGTAQISVRVLDTNDNSPAFDQSTYRVQLREDSPPGTLVVKLNASDPDEGSNGELRYSLSSYTSDRERQLFSIDASTGEVRVIGGLDYEEASSYQIYVQATDRGPVPMAGHCKVLVDIVDVNDNAPEVVLTDLYSPVPENATPNTIVAVLSVNDQDSGPNRKVSLGL-------------EATLPFRLNGFGNSYTLVVSGPLDRERVAVYNITVTATDGGIPQ-LTSLRTLKVEISDINDNPPSFLEDSYSIY-IQENNLPGVLLCTVQATDPDEKENAEVTYSLLEREIQGLPVTSYVSINSASGSLYAVNSFDYEKFREFFVTVEAQDKGNPPLSSTGTANVYVVDMNDHAPHILYPS 583 HSP 4 Score: 99.7525 bits (247), Expect = 8.724e-20 Identity = 108/401 (26.93%), Postives = 186/401 (46.38%), Query Frame = 2
Query: 1415 HIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIV-FQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHF------FQIDSSG-KMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDR--GEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAV-DLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKP 2575
H+ P + D+ S +L N+++ D+E A ++ + + +++L A+N + S V +ILD NDNSP+F R + +V E+ + F E A D D NS +++ EHF Q +S ++ ++ LDRE+ ++ + A DGG P ++GT +++ V+D ND P F S Y + E++ GT V + A D D +N +++Y + S Y+S Q+ D GE+ LD E+ S Y + V A D G P V ++I+DVNDN P ++ ++S + I V +V D D G N ++ +E P+ F + L+++ L ++ + + ++A D G P
Sbjct: 81 HLGAPSPRYLELDLTSGALFVNERI--------DRE------ALCEQRPRCLLSLEVL----AHNPVAVSAVEVEILDINDNSPRFPRPNYQLQVSESVAPGARFHIE-SAQDPDVGANSVQTYEL-SPSEHFELDLKPLQENSKVLELVLRKGLDREQAALHHLVLTAVDGGIPARSGTAQISVRVLDTNDNSPAFDQSTYRVQLREDSPPGTLVVKLNASDPDEGSNGELRYSLSS----------YTSDRERQLFSIDASTGEVRVIGGLDYEEASSYQIYVQATDRG-PVPMAGHCKVLVDIVDVNDNAPEVVLTD--LYSPVPENATPNTIVAVLSVNDQDSGPNRKVSLGLEATLPFRLNGFG-NSYTLVVSGPLDRERVAVYNITVTATDGGIP 447
BLAST of Protocadherin 1b vs. TrEMBL
Match: A0A0R3X5C4 (Uncharacterized protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS8640 PE=4 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 2.211e-84 Identity = 268/958 (27.97%), Postives = 409/958 (42.69%), Query Frame = 2
Query: 359 QIFEEPKNGTEIEVLTKYLKNNI-VSVSTSYRIFDGNKLLN-CLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNV---------------------EILDINDNAPSWPQQSKVVS-FTEFEGNKLESRT---IHIDKAFDPDVNENSQIDYFLKD-------RNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYY---ANKLSENANIGFVALTVSAKDADYLA-NGKITYRI---EDQKASEYFNIGNNGNIMVRKNIDYDAGVKG-------------------FQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLT--NEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVS--------------PSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPN-----------MFVGEVMAVDKDAERNSKIEFQIIGNEE--------------------------HFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPP----KTGTGLVTIEVVDINDWKPEF-----------------------SLSLYEFSISENAGIGTSVGTVTAIDRDLP-------------ANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINII--DVNDNFPTFKTSNKTVFSIQTTE--------------------------------SVGYEIGT----------------VEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLS---KQDDHKLVISACDKGKPPKCSNPLWVTI 2608
QI EE NGTEI +++YL N I VS +Y++ D +++L L I+P+T + V RIDRE+LC + I L + + K +N+ I D+NDN PSW K + E N LE + + + A+DPD N +I Y L++ + D G S ++L P + ID E+ VY+L+LIA D G P G L + ++D ND P+F + + +SE + G V L V+A D D N ++TY + ++ E F++ +G I++R +DY+ G F F V A D AP Y KTG VVI +IDENDE+P I L E +I LA+I+ +DPDF GRD V C++ +N+ + L +V+ P + +F + DRE + +V I C D+A NTA I ++LD ND +P F R VF+F V EN VP+ +G V+A DKD N+KI++ ++ E F+IDS +G+++ + D E+ + + ++A D P TGT V ++V D+NDW P F ++ Y+FSI EN T VG ++AID D+ A+ R ++ +F++ + ++ I G++ T LDRE S+Y VVA+D G + + T+T + ++ D NDN P F V + E +V +G+ +EA D D G N +I Y I GN F + L+L +VL + ++ L ACD+G PP+C+NP + I
Sbjct: 3 QIIEESSNGTEISGVSEYLHNAIGVSSKATYQLLDSHEMLTRLLKIEPQTGRLYVDGRIDREALCSQ--SSKIPLTYLDPEASCVKQINILATAQTENNQEVSVQTIPIKLVIQDVNDNKPSWNLAGKQLDDLPILEANILEQGSGNKVLVPAAYDPDSGRNGEISYRLENYISSSSSGANERDQGPAPFTISGPISGMLQLTPFQPIDYEKQSVYDLLLIASDAGEPTNVGRAHLRVNVIDVNDECPVFTQQVFTPPGGRGISERTHPGKVILNVTAIDGDASERNSRLTYSMVPSSNRLIGEIFSVHPDGRIILRHWLDYETLEPGLMASSTSALREAPPTEGKQFAFFVKATDSAPPPYEKTGTALVVIPIIDENDERPIITSRFLGSPELVKHGEAGVITENSSVPVRLAYIQARDPDFEGRDSVECTVPDNENLSLRRVTPFTHRSSSDDVNMPPKNNDFLLSLEEPVDRETTKVLQVRIHCVDEANNTADLLINIRVLDVNDETPTFLRPVFYFSVNENTKVPSDGNGANGTLQGYRIGRVIAYDKDEGDNAKIKYGLLPTIEIEEPKLRPSLFPLSDYGQEVAPTQAFDLFRIDSITGELFALRSFDAEKEKLIKLKVIAVDQPSDPTATSHTGTASVYVQVFDMNDWSPVFHQVVDNTKPNQQLYAPSILDEPTTVDSYQFSIKENLPAYTLVGRISAIDPDVSFWGVIGSVNNSNGADGSRALRSVTIQFAQGTAPYVENAF---TIHSASGQLRTTGPLDREAYSNYTFNVVAVDRGPVDGISRTSTAGVTVLVEDENDNDPVFVRPAAEVADTRGPEESFFEEEALSPLSQSIESPPTSTTDTDHIPVVAVSLPVGSGSVDVSSNQIPRPLIRIEAQDPDAGANGQIRYAITSGNTDEIFYLDPNTGSLVLKTVLPATKETSNYLLQFEACDQGSPPRCANPARLRI 955
BLAST of Protocadherin 1b vs. TrEMBL
Match: A0A0R3SI41 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS4604 PE=4 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 1.574e-83 Identity = 261/897 (29.10%), Postives = 391/897 (43.59%), Query Frame = 2
Query: 362 IFEEPKNGTEIEVLTKYLKN-NIVSV----STSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQI----------NCDIMLRFFI--------SPSYVSKSLNVEILDINDNAPSWPQQSKVV--------SFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKT--------DNGVWKIKYDSS-TSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIF-----------------DRAKYYANK--LSENANIGFVALTVSAKDADYLANGKITYRIEDQKAS---EYFNIGNNGNIM-VRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTN----------------------EPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSD-----------------------KEFQILAIA--------------NFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFT--RVFHFRVLEN-ASVPN--MFVGEVMAVDKDAERNSKIEF------------QIIGNEEHFFQIDS-SGKMYTKQVLDREETEK---FNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPAN-TKMKYR-------IISDRFSKESYFQYS-SSLPFQM------------IRHDR-----------GEIVTKYLLDREKQSHYLLTVVAIDNGHPNS-------------------------YTSTTTVKINIIDVNDNFPTFKTSNKTV-FSIQTTESVGYEIGTVEAVDLDFGENSEIVYQI 2449
+ EE GT I + +YLK +V+V ST+Y++ + I+P+T + RIDRES+C + +C L I + S + + + I+DINDN+P WP + + S T F ++ +++ +D+A DPD N + Y LK DNG +YD + + L P+ +DRE + Y L L A D G+P+R+ S+ L + + D ND+ P+F D + + L E A IG L ++A D D N +ITY I A+ YF++ + I+ VR+ +DYD G + F+F VLA+DGAPE R TG V I + D NDE P I + + + L + A IE + V+A+++V D D G D V C L D L+ SPS E++ILA DRE + + I+CKD+ N A + I +LD NDN PKF F+F + EN V N +++G V A D D N++I + Q + + F++ +G +Y + LDRE +++ ILA D G P TGT V I V+D+NDW PEF+ +Y F + E+ + VG V A+DRD A + YR I+ ES + S+P Q +R +R GEI LDRE S++ V+AID+ S +T+T TV + + DVNDN P F+ N ++ + E++G++I TV+AVD D+GEN+ I Y I
Sbjct: 29 VVEECPPGTLISGVAEYLKQIMLVTVEMPNSTTYQLMGTDPFTKSFVINPKTGELRTVGRIDRESICTPDVTSRNDLGIDSSCLKSLNVLINSRGIDGAARSGMRMQIMLRIVDINDNSPKWPGKRILTVRFVESFQSGTSFGKQEMTTQSQLLDRAVDPDAGPNGTVSYSLKGNGADMFRLEYPDLDNG----RYDQQDINSPLRLKPVVPLDREMFEYYNLTLYAFDAGNPQRSSSIPLDVYVTDFNDHAPVFHSYNSGHSGYSRDNKQGDSVRIIPERTHLMETARIGSEVLQLNATDEDSGENARITYSIFPGDAALVQPYFDLDPSSGILRVRQRLDYDLGPRKFKFKVLAVDGAPEPIRLTGTTSVEIELTDYNDEPPNIEILIPQNGNLNGGNTANINGGITPILSAGGKYQEQVAFIEESPSPDIVIAYVQVSDMDENGEDQVECHLGPRDNFTLQADSPSSGGKSDHFGFDSGASLSDRLSKRISEYRILAKVPSDHSSGSSSSLQNRLDRETTPTQLLTIICKDRNGNQAERRIRLHLLDINDNPPKFINDSYFNFSIAENREPVGNQQVWLGRVQAFDPDLGENARITYHLAPEQNGYHDGQFASSAQQLFRVQPDTGDIYAQVSLDRENAPDNGVYSMNILAVDHGKPQLTGTARVDITVLDVNDWPPEFTRDIYTFEVPEDLELREVVGVVEAVDRDATAGPNTITYRLNPPRSGIVQRSLGNESLERVKRDSMPLQQQPLFMPHLEPSKVRDERPLSYFSIDSRTGEIRVIRKLDRETNSYFTFEVLAIDSPLSGSSQVPMTQSSNQIQQGSRRGFKGGETFTATATVVVTLTDVNDNAPEFRYPNTSILLHMAPGETLGHKILTVQAVDADYGENARISYNI 921
BLAST of Protocadherin 1b vs. TrEMBL
Match: R7VJZ4 (Uncharacterized protein (Fragment) OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_32685 PE=4 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 1.921e-82 Identity = 217/693 (31.31%), Postives = 356/693 (51.37%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSL--NVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSST--SRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEY---FNIGNN-GNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH-VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDP-PKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQY---SSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF---KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKL 2503
L +DP + +++ R+DR+ +C C + L I + + + + +VEILD+NDN+P +P +SF E + + I +A DPD N+ Y L W++ + +R + L +DRE Y L ++A D GS R+GS+++ I++ D NDN P+FD A Y + EN + + A+DAD+ NGK+ Y + + AS Y F I N+ G + V+ +D+++ + +++A D + ++I V D ND P I ++ + RD TN + E+ I + V H+ VKDPD G +CSL N RLEQ P +E+ +L DRE+++ ++ + C D+ T++K I + D NDN+P F + L + +V V A D+D RN++I + + N+ FF ID+ +G + + LDRE ++N+ ++A+D G+P PKT T + ++V+D+ND KP F+ ++Y F + EN G VG ++A D D P +++ S F S S F+M D G + T LDRE+QS Y L VA D P + +ST TV I+++D+NDN P F +N+TV + +G+ + ++A D D N +I+YQ+ +GN G F+ + + L
Sbjct: 46 LSVDPRSGLISTSGRLDRDVICAGFFTCIVPLDIAIHANKIFQVVKASVEILDLNDNSPKFPDPR--ISFQVLESAHPGATSFLIPEARDPDSPSNAVQSYELVAEGSDA----WRLNVEEEVDGAREVMLALTDHLDRETNGHYHLQVVAYDGGSSPRSGSIDIFIEVEDANDNSPVFDSASYEVT-IDENTPRLTNIIQLRAQDADWGVNGKVQYSLSARSASTYGHLFGIHNSTGQVFVKGAVDFESS-PSYHLTIVARDSGSGSVPSS--ASLLISVRDLNDHAPHITMNTLLARD--TNRSFVPEDAPIGHFV-GHVIVKDPDSGTNGAFNCSLENR-AFRLEQTFP--EEYHVLTTKELDREQRNEYRLTMRCVDRGSPPMTSTKHISVVVTDVNDNAPVFREASYVAELFENNYHGAYVTRVNATDEDEGRNAEIVYGLGPNDLAFFDIDAVTGVISARDSLDRERRSEYNLRVVARDNGEPTPKTSTVSLLVKVLDVNDEKPLFTSAVYSFGVDENLPAGHEVGFLSAHDADSPP------------YNQHSMFLLPAGSLSDAFEM-DDDTGMVRTTRPLDREQQSVYELIAVARDINSP-TISSTATVSIHVMDLNDNPPFFIFPAPANRTV-QLSHKVPLGHVVTQIKARDRDRDSNGKIMYQLTQGNTEGVFTVDPNSGAL 707 HSP 2 Score: 100.908 bits (250), Expect = 7.769e-18 Identity = 94/344 (27.33%), Postives = 161/344 (46.80%), Query Frame = 2
Query: 1634 QILDRNDNSPKFT--RVFHFRVLENA--SVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFF------QIDSSGKMYTKQV--LDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-------VGYEIGTVEAVDLDFGENSEI-------VYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCS 2587
+ILD NDNSPKF R+ F+VLE+A + + E A D D+ N+ ++++ + ++D + ++ LDRE +++ ++A DGG P++G+ + IEV D ND P F + YE +I EN T++ + A D D N K++Y + S S Y I + G++ K +D E Y LT+VA D+G S S+ ++ I++ D+ND+ P + T+ + T S +G+ +G V D D G N +++E+ P Y T+ ++++++L + D+G PP S
Sbjct: 95 EILDLNDNSPKFPDPRI-SFQVLESAHPGATSFLIPE--ARDPDSPSNAVQSYELVAEGSDAWRLNVEEEVDGAREVMLALTDHLDRETNGHYHLQVVAYDGGSSPRSGSIDIFIEVEDANDNSPVFDSASYEVTIDENTPRLTNIIQLRAQDADWGVNGKVQYSL-----SARSASTYGHLF---GIHNSTGQVFVKGAVDFESSPSYHLTIVARDSGS-GSVPSSASLLISVRDLNDHAP--HITMNTLLARDTNRSFVPEDAPIGHFVGHVIVKDPDSGTNGAFNCSLENRAFRLEQTFPEEYHVLTTKELD------REQRNEYRLTMRCVDRGSPPMTS 418
BLAST of Protocadherin 1b vs. TrEMBL
Match: A0A2H5BFB8 (Pcd11x OS=Platynereis dumerilii OX=6359 PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 4.266e-80 Identity = 230/715 (32.17%), Postives = 352/715 (49.23%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFF-ISPSYVS----KSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITY----RIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDH--KLVISACDKGKPPK 2581
I+ T V+ RIDR++LCP Q C ++L +P + V I DINDN P +P +S E + + I A DPD + S DY L + K + V K K D ST R+ L +DRE VD Y++ ++A D G+P ++GS+++ I + D NDN P+F A Y ++ENA G V A D D G+I Y R +D + + G I V+ +DY+ + VLA D + E V++ V+D ND P I V+ T T ++EN + +AH+ V DPD G +CSL N+D RL+Q D E++I+ DRE + +LC+D A K + + D ND++P F++ + + EN + +F+ V A DKD+ N I++++ + F +D +G + + VLDRE+T++ ++A D G P K+GT V + V D+ND KP F+ S Y F + EN GTSVGTV A+D D + +Y I+ ++ S+ I G+I T +LDRE + Y L ++A D G P +ST TV I + D NDN P F+ + T +I + V GY + V+A+D D G N+ + Y I GN +F + + +++ L +DH + + D G+P K
Sbjct: 83 INKSTGVIRTDGRIDRDALCPRQDTCRVILDVVAFTPGQTQFLEIIKVKVNIEDINDNWPHFPDAR--ISHQILE-SAVPGYGFVIPTAIDPDSGQFSVRDYELVSSSDKFELSV-KTKLDGSTDVRLILK--DSLDREDVDFYQVRVVAYDGGNPPKSGSVDVNIIVQDANDNDPMFTNATYEVT-IAENAAPGTTLTKVHASDKDAGLYGQIRYSFSSRTQDTHGAVFGIKNTTGEIYVKGEVDYETS-PVYHLVVLADDRGSDTI--PAEATVIVRVLDVNDNAPLITVN-TLTQAGTEVAEVVEN-ADPETFVAHLTVTDPDNGKNGKFNCSL-NDDSFRLQQFF--DSEYKIVTRKKLDRETHDKYNLSVLCQDFGDEPLVAIKRLQIIVTDDNDHAPVFSQSTYEASLTENNHI-GVFITRVNATDKDSGENGLIDYKLHPDAGGDFHVDGLTGTVSARAVLDREQTQQIRFRVIASDRGQPRKSGTATVIVNVQDVNDEKPMFAQSAYSFGVYENEPEGTSVGTVHAVDPDTDPYNQFQYSILPGHSAENSF----------AIDPHTGKITTTTVLDREDKPVYYLLIMASDKGVP-PMSSTATVSIYVADKNDNPPVFEFPSDTNNTISISNQVPKGYLVTKVKAIDRDIGGNANLTYYISRGNHLNFFHMDPIFGVITVSTELKDIEDHVFHMQLKVSDSGQPEK 770 HSP 2 Score: 161.77 bits (408), Expect = 2.617e-36 Identity = 166/579 (28.67%), Postives = 261/579 (45.08%), Query Frame = 2
Query: 935 SPKRTGSLELI---IQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYR-IEDQKASEYFNIG--------NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQV-SPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNT--ASKSIVFQILDRNDNSPKFT-------RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE---EHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPY-GYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCS 2587
+P +T LE+I + I D NDN P F A+ ++++ E+A G+ + +A D D +G+ + R E +S+ F + + ++++ ++D + V +Q V+A DG K+G +V I+V D ND P T E I EN + L + D D G + S S+ + V + +I D E + + +L D+ +T A +++ ++LD NDN+P T V+ENA P FV + D D +N K + + + FF DS K+ T++ LDRE +K+N+++L +D GD P + I V D ND P FS S YE S++EN IG + V A D+D N + Y++ D F G + + +LDRE+ V+A D G P + T TV +N+ DVND P F S + F + E G +GTV AVD D ++ Y I G+ F+ + K+ +VL ++D + L+I A DKG PP S
Sbjct: 118 TPGQTQFLEIIKVKVNIEDINDNWPHFPDARI-SHQILESAVPGYGFVIPTAIDPD---SGQFSVRDYELVSSSDKFELSVKTKLDGSTDVRLILKDSLDRE-DVDFYQVRVVAYDGGNPP--KSGSVDVNIIVQDANDNDPMFT-------NATYEVTIAENAA-PGTTLTKVHASDKDAGLYGQIRYSFSSRTQDTHGAVFGIKNTTGEIYVKGEVDYETSPVYHLVVLADDRGSDTIPAEATVIVRVLDVNDNAPLITVNTLTQAGTEVAEVVENAD-PETFVAHLTVTDPDNGKNGKFNCSLNDDSFRLQQFF--DSEYKIVTRKKLDRETHDKYNLSVLCQDFGDEPLVAIKRLQIIVTDDNDHAPVFSQSTYEASLTENNHIGVFITRVNATDKDSGENGLIDYKLHPDAGGD---FHVDGLT---------GTVSARAVLDREQTQQIRFRVIASDRGQPRK-SGTATVIVNVQDVNDEKPMFAQSAYS-FGVYENEPEGTSVGTVHAVDPDTDPYNQFQYSILPGHSAENSFAIDPHTGKITTTTVLDREDKPVYYLLIMASDKGVPPMSS 664
BLAST of Protocadherin 1b vs. TrEMBL
Match: A0A210PLD8 (Protocadherin-11 X-linked OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT12667 PE=4 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 7.963e-80 Identity = 234/749 (31.24%), Postives = 388/749 (51.80%), Query Frame = 2
Query: 464 NKLLNCLHIDPETHVVTVKNRIDRESLCPNQINC----DIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASE---YFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTN--EPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHF-RVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQI-DSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF----KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLV--ISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPP 2650
N L++ HI+ + ++DRE+LC + C +++ R Y +++ +LDINDN+PS+ S +E L I I+ A D D N I Y++ + ++ D + S RI L +DRE Y++ +IA D G P +TG LE+II +LD NDN P F+ + Y ++E+ + TV A D D NG++TY++ +A + F I ++G++++ ++ Y+ G K + V A D A + + +V I V+D ++ PEI + DPL+N + I+EN ++ +V AHI + DPD G IV+CS+ N+DK L++ + E++++ +RE K +V + C D AS V ++D NDN+PKFT+ +F V EN S+ + V +V A D D +N+++ F + + +F+I ++SG + VLDRE + + ++ A D G P TG+ V + V D+ND KPEF +E+++ EN + ++G + A D+D N+++ Y I + Y + +PF ++ + G I+ ++DRE ++ Y TV+A D G+P S ++ V + ++DVNDN P F +N V S QT V + TVE D+D G NS + Y +++ N F N + +++L+ L+ D K I A DKG PP+ N + ++I V Q I PP
Sbjct: 80 NSLVSLFHINERQSSLYTAQQLDRENLCEYKDECVLELEVIARSTSGSLYKKIKVSITLLDINDNSPSFSVPSITRDISE---GSLTGFYIPIEAAKDADTG-NFSIQYYILEPPSSPFTVGYQEFVDGTYSVRIVLD--GQLDRETTSSYKVNVIARDGGEPPKTGVLEVIINVLDINDNRPRFN-TQMYNVTVNEDVAVNTTITTVFADDPDQGENGRVTYKLSPNQAEKIPTLFTIDESSGDVIIVGSLIYEPG-KSYTIIVEASDNALQPL--ISQSKVFIHVLDVHNNPPEISI-----DPLSNTEDSEILENAILDTAV-AHITIFDPDTGKNGIVNCSVVNSDKFTLQRFAV--HEYKVVLSQALNREIKDRYEVTVHCHDIGTPQLNASAMFVVHVMDINDNTPKFTQQQYFVSVQENKSLTSS-VMQVAANDFDNGKNAEVMFSLDSEGQKYFRISETSGVITVNSVLDRETVSQISFSVFAADKGSPSLTGSAQVRMIVTDVNDNKPEFMEDTFEYNLEENNHVNINIGVLVANDKDDGNNSQITYSI---------HPNYHAGIPFAIMPN--GSILATQVIDREAKARYDFTVIAEDMGNP-SLRNSAHVTVFVLDVNDNNPEFVFPNAHNNTVVISYQT--PVNTIVSTVETRDIDEGMNSRVTYFMKDKNFSHIFKLNNLSGRIVLDKALTVADAKKYTFGIIAQDKGTPPRI-NEIAMSIVVTTQKIGGDVTPP 794
BLAST of Protocadherin 1b vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 263.462 bits (672), Expect = 1.058e-72 Identity = 213/727 (29.30%), Postives = 351/727 (48.28%), Query Frame = 2
Query: 482 LHIDPET-HVVTVKNRIDRESLCPNQINCD-IMLRFFIS---------PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRI-ELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQK--ASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSD----KEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF-KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPK 2581
L +D +T + T + IDRE+L +I L F +S P + +E+ DINDN P +P +S E N T I +A D D N + Y L G + ++ ++ + ++ +L+ + +DRE D Y+L + A D G+P R S L + I D NDN P F+++ Y A ++SEN+ +G+ L V A D+D NG+I Y I + I + G I V+ +D + + F+F V+A D P K+ V I V D+ND P + + ++ A I ++ + +A ++V D D G +V+C ++ + +L S K++ + D E +V+I+ D +++ S+ Q+ D NDNSP F+ + P V +V+A+D D+ N+++ + II + F+ID SSG++ + LDRE E++ + A D G P GT V I+V+D ND P+F LS Y FS+ EN + VG VT +D D N +++ + D + ++++ G I++ DREK+S Y + A+D G P +S V IN++D NDN P K SN + + + + VEA D+D+G N+E+VY I GNP+ F + + ++ L L+++ H+LV+ D+GKP +
Sbjct: 64 LRVDGKTGEIFTTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEG--RIEVQDINDNTPQFPSPVLTLSVQE---NAHMGATFAIPQATDRDTERNGVLKYDLS--AGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEA-EVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREE-ISSFKFHVIARDKGPSP--KSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNF-------------VVQNGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSR 765 HSP 2 Score: 103.605 bits (257), Expect = 6.560e-22 Identity = 174/713 (24.40%), Postives = 288/713 (40.39%), Query Frame = 2
Query: 599 YVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIK-VIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFD--------RAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGN-------IMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFG-GRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSL-SLYEFS-ISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFG---ENSEIVY---------------------QIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLW 2599
Y S L V I D NDNAP + + S +E N ++ KA D D+ N +I+Y + + + V K+ R ++ +K +DRE++ ++ +IA D G ++ + + I++ D+NDN P + + AN +SE+ +G V D D N +T + + G++ + +DY+ ++ ++ ++A+D T V V D ND P P E E VL I + D D G ++V ++++ L ++ PS E + A + DRE K + + D+ + + ++V ++LDRNDN PKF + F VLEN P VG V +D D N++++ + + +F + +G + + DRE+ + + A DGG+PP++ VTI V+D ND P + S F +S A + V V A D D +N ++ Y I + Y S GEI L R+ + L V D G P+ + + + I VN+ SN ++ S+ + T A D D+G + S IVY +++ GY + + K L KQ + KGKPPK PL
Sbjct: 224 YSSALLRVVITDANDNAPQFEKSSYEAEVSE---NSPVGYSVLQVKANDSDLGPNGEIEYTIH----QASDPVPKML---QIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVAN-ISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYER-IRDYRVEIVAVDSGNPALSSTNSLRV--QVTDTNDNSPIF-------SPPLFEVEFAEENQPGEKVLDVIAL-DADSGTNAELVYSIIADSSTRGLFEIDPSSGE--VRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMP-PLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSD-----------GEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHA----IALVHIYVNETI-----SNVSLVEGLVGHSLYTPLDTDIAGDPDYGLAAQRSNIVYGSLAGVAGVVTVIIVVVFIRHRLQRETKSGYQAGKKETKDLYA----PKQGTKSIKGKKGRKGKPPKSPKPLG 887
BLAST of Protocadherin 1b vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 264.233 bits (674), Expect = 3.060e-72 Identity = 213/725 (29.38%), Postives = 350/725 (48.28%), Query Frame = 2
Query: 482 LHIDPET-HVVTVKNRIDRESLCPNQINCD-IMLRFFIS---------PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRI-ELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQK--ASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSD----KEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF-KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKP 2575
L +D +T + T + IDRE+L +I L F +S P + +E+ DINDN P +P +S E N T I +A D D N + Y L G + ++ ++ + ++ +L+ + +DRE D Y+L + A D G+P R S L + I D NDN P F+++ Y A ++SEN+ +G+ L V A D+D NG+I Y I + I + G I V+ +D + + F+F V+A D P K+ V I V D+ND P + + ++ A I ++ + +A ++V D D G +V+C ++ + +L S K++ + D E +V+I+ D +++ S+ Q+ D NDNSP F+ + P V +V+A+D D+ N+++ + II + F+ID SSG++ + LDRE E++ + A D G P GT V I+V+D ND P+F LS Y FS+ EN + VG VT +D D N +++ + D + ++++ G I++ DREK+S Y + A+D G P +S V IN++D NDN P K SN + + + + VEA D+D+G N+E+VY I GNP+ F + + ++ L L+++ H+LV+ D+GKP
Sbjct: 100 LRVDGKTGEIFTTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEG--RIEVQDINDNTPQFPSPVLTLSVQE---NAHMGATFAIPQATDRDTERNGVLKYDLS--AGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEA-EVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREE-ISSFKFHVIARDKGPSP--KSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNF-------------VVQNGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKP 799 HSP 2 Score: 104.76 bits (260), Expect = 3.235e-22 Identity = 172/707 (24.33%), Postives = 286/707 (40.45%), Query Frame = 2
Query: 599 YVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIK-VIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFD--------RAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGN-------IMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFG-GRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNT--ASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFS-LSLYEFS-ISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFG---ENSEIVY---------------------QIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPK 2581
Y S L V I D NDNAP + + S +E N ++ KA D D+ N +I+Y + + + V K+ R ++ +K +DRE++ ++ +IA D G ++ + + I++ D+NDN P + + AN +SE+ +G V D D N +T + + G++ + +DY+ ++ ++ ++A+D T V V D ND P P E E VL I + D D G ++V ++++ L ++ PS E + A + DRE K + + D+ + + ++V ++LDRNDN PKF + F VLEN P VG V +D D N++++ + + +F + +G + + DRE+ + + A DGG+PP++ VTI V+D ND P + S F +S A + V V A D D +N ++ Y I + Y S GEI L R+ + L V D G P+ + + + I VN+ SN ++ S+ + T A D D+G + S IVY +++ GY + + K L KQ + KGKPPK
Sbjct: 260 YSSALLRVVITDANDNAPQFEKSSYEAEVSE---NSPVGYSVLQVKANDSDLGPNGEIEYTIH----QASDPVPKML---QIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVAN-ISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYER-IRDYRVEIVAVDSGNPALSSTNSLRV--QVTDTNDNSPIF-------SPPLFEVEFAEENQPGEKVLDVIAL-DADSGTNAELVYSIIADSSTRGLFEIDPSSGE--VRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMP-PLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSD-----------GEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHA----IALVHIYVNETI-----SNVSLVEGLVGHSLYTPLDTDIAGDPDYGLAAQRSNIVYGSLAGVAGVVTVIIVVVFIRHRLQRETKSGYQAGKKETKDLYA----PKQGTKSIKGKKGRKGKPPK 917
BLAST of Protocadherin 1b vs. Ensembl Cavefish
Match: pcdh1b (protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]) HSP 1 Score: 258.84 bits (660), Expect = 5.249e-71 Identity = 230/797 (28.86%), Postives = 376/797 (47.18%), Query Frame = 2
Query: 317 WILLLI----SSITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN-------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRI-ELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKAS--EYFNIGNN-GNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSD----KEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP-TFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPL 2596
W +LL+ SS+ Q+ EE T + L + Y++ G L +D +T + T IDRE+L C N D L F +S + + K +EI D NDN P +P ++ E N I A D D N DY L +G ++ ++ +T ++ +L+ + +DREQ D Y+L + D G+P R S L I I D NDN P F+R+ +Y +++EN +G L V A D D ANG++TY + +I +N G I V+ ++D + V +FSV A D P+ K+ + V I V D ND P I + V D + N + ++ + +A +EV D D G +V+C ++ + +L S SD +++ + D E +++I+ D +++ S+ Q+ D NDN+P F+ + + P V +V+A D D+ N+++ + II + + F I+ ++G++ LDRE E++ + A D G P GT V + V+D ND P+F L+ Y FS+ EN + VG VT ID D N ++ + + +F +I++ G I++ DREK+S Y + A+D G P +S + IN++D NDN P K SN + +Q S + V+A D+D G N+E+VY I GNP+G F ++ + ++ L +++ + H+LV+ DKGKP + + L
Sbjct: 20 WTVLLLYSCGSSLASITYQLREEQPPNTLVGSLAA--DQGLPDTGHLYKLEVGGPYL---RVDGKTGDIYTTDVPIDRETLKDCRNLFEGDPCFLEFEVSITDLMKGSGPRLIEGRIEIQDENDNTPQFPSPILELAIPE---NTYVGAHYSIPVAMDKDAGSNGIADYKLN--SGSDAMNLFSLQVADNTDEKVPQLIVLGNLDREQRDTYDLSIKVIDGGTPPRYSSALLRITITDTNDNVPKFERS-HYEGEMAENTPVGQSVLQVKANDDDLGANGQVTYSFHQPSPNVQRLLHIDHNTGIIQVKGSVDREE-VPLLKFSVQARDNGPQA--KSSKAMVTITVKDRNDNAPSIRIRGFGLVAHEDGIAN----VSEDMPVGTPVALVEVSDKDEGENAVVTCVVAGDVPFQLRSASASDSTSKRKYFLQTTTPLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPSLYEVDFAEENQPGDKVLDVVATDADSGTNAELLYSIITDSATKGLFDINPNTGEVRVMNQLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLENMPPLSPVGMVTVIDADKGENAHVQLSVEPENGKF---------------VIQNGTGTILSSISFDREKESTYTFRLKAVDGGDP-PRSSYVGITINVLDENDNAPYVTKPSNSSYKFLQPLTSPDTRVEKVDAEDIDTGLNAELVYSITGGNPHGLFRISSTDGEITLAKEFTRKHNGLHRLVVKVSDKGKPSRHTTAL 782 HSP 2 Score: 140.969 bits (354), Expect = 2.064e-33 Identity = 168/592 (28.38%), Postives = 260/592 (43.92%), Query Frame = 2
Query: 956 LELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRI-EDQKASEYFNIGNNGN-------IMVRKNIDYDAGVKGFQFSVLAIDGA-PEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAI-ANFDREEKSMEKVDILCKDQAYNT-ASKSIV-FQILDRNDNSPK-----FTRVFHFRVLENASVPNMFVGEVMAV----DKDAERNSKIEFQIIGNEEHFFQI------DSSGK----MYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLS----KQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQH 2626
+E I+I D+NDN P F + + EN +G A D D +NG Y++ A F++ N ++V N+D + + S+ IDG P Y + I + D ND P+ +R E A EN + SVL ++ D D G V+ S + ++++ D I+ + + DREE + K + +D +SK++V + DRNDN+P F V H + N S +M VG +A+ DKD N+ + + G+ FQ+ DS+ K + T LD E +++ + I+A D G+P + T + ++V D+ND P FS SLYE +E G V V A D D N ++ Y II+D +K + I + GE+ LDRE + Y V A D G P S T TV + ++D NDN P F N FS+ +G V +D D GEN+ + +E N F QN + S +S K+ + + A D G PP+ S + +TI V+ ++
Sbjct: 127 IEGRIEIQDENDNTPQFP-SPILELAIPENTYVGAHYSIPVAMDKDAGSNGIADYKLNSGSDAMNLFSLQVADNTDEKVPQLIVLGNLDREQ-RDTYDLSIKVIDGGTPPRYSS---ALLRITITDTNDNVPKF-----ERSHYEGEMA--ENTPVGQSVL-QVKANDDDLGANGQVTYSF-HQPSPNVQRLLHIDHNTGIIQVKGSVDREEVPLLKFSVQARDNGPQAKSSKAMVTITVKDRNDNAPSIRIRGFGLVAHEDGIANVS-EDMPVGTPVALVEVSDKDEGENAVVTCVVAGDVP--FQLRSASASDSTSKRKYFLQTTTPLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPSLYEVDFAEENQPGDKVLDVVATDADSGTNAELLYSIITDSATKGLF----------DINPNTGEVRVMNQLDREYKERYEFHVEAADKGVP-SLKGTATVVVRVLDRNDNDPKFML-NGYSFSVLENMPPLSPVGMVTVIDADKGENAHVQLSVEPEN----GKFVIQNGTGTILSSISFDREKESTYTFRLKAVDGGDPPRSSY-VGITINVLDEN 684 HSP 3 Score: 119.783 bits (299), Expect = 7.365e-27 Identity = 161/659 (24.43%), Postives = 272/659 (41.27%), Query Frame = 2
Query: 593 PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLE----SRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYA--------NKLSENANIGFVALTVSAKDADYLAN--------GKITYRIEDQKASE------YFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFG-GRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNT--ASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKP---EFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES-VGYEIGTVEAVDLDFG--------ENSEIVY 2443
P Y S L + I D NDN P + + + +EG E +++ KA D D+ N Q+ Y + V ++ + + I++ +DRE+V + + + A DNG ++ + I + D+NDN P R + + +SE+ +G V D D N G + +++ AS+ YF + +DY+ +K ++ ++A+D T +V V D ND P P E E + VL + D D G +++ ++++ L ++P+ E +++ DRE K + + D+ + + ++V ++LDRNDN PKF + F VLEN P VG V +D D N+ ++ + F + +G + + DRE+ + + A DGGDPP++ +TI V+D ND P + S S Y+F + T V V A D D N ++ Y I + F+ SS+ GEI R+ + L V D G P+ +T T V I + N+T+ ++ ES VG+ + T ++D+D +NS IVY
Sbjct: 234 PRYSSALLRITITDTNDNVPKFER-------SHYEGEMAENTPVGQSVLQVKANDDDLGANGQVTYSFH----QPSPNVQRLLHIDHNTGIIQVK--GSVDREEVPLLKFSVQARDNGPQAKSSKAMVTITVKDRNDNAPSI-RIRGFGLVAHEDGIANVSEDMPVGTPVALVEVSDKDEGENAVVTCVVAGDVPFQLRSASASDSTSKRKYF-------LQTTTPLDYER-IKEYRIEIVAVDSGNPALSSTNSLKV--QVTDMNDNAPVF-------SPSLYEVDFAEENQPGDKVL-DVVATDADSGTNAELLYSIITDSATKGLFDINPNTGEVRVMN--QLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLENMP-PLSPVGMVTVIDADKGENAHVQLSVEPENGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPSNSSYKF-LQPLTSPDTRVEKVDAEDIDTGLNAELVYSITGG--NPHGLFRISST---------DGEITLAKEFTRKHNGLHRLVVKVSDKGKPSRHT-TALVHIFV-------------NETISNVTLVESLVGHSLYT--SLDMDIAGDPSYERVQNSNIVY 829
BLAST of Protocadherin 1b vs. Ensembl Cavefish
Match: ENSAMXT00000036470.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:10716691:10726912:1 gene:ENSAMXG00000037804.1 transcript:ENSAMXT00000036470.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 240.736 bits (613), Expect = 2.965e-65 Identity = 215/765 (28.10%), Postives = 355/765 (46.41%), Query Frame = 2
Query: 362 IFEEPKNGTEIEVLTKYLKNNIVSV-STSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKY-DSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQ---KASEYFNI----GNNGNI----MVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQV-SPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASK--SIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQV----LDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQT-----TESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKP 2575
+ EE K GT + + K L N+ + + +RI K + +T + V +RIDRE+LC C + + + V I+DINDNAP +P ++++ TE E T+ + A DPD N+ +Y L + N + + + S +EL+ K +DRE V LIL A D G P +G+ E+ I ILD NDN P+F ++ Y K+ ENA G L++SA D D N +ITY I Q A+EYF++ G NI +++K +D + Q + A+DG ++G ++ I VID ND P + K +++EN + V+ + D D G + SL ++ K + + + + +I DRE+ + ++ +D+ + + ++ ++LD ND+ P + + + VG + D D +N ++ ++ G F + +S K Y V LDRE+ +++VTILA D G PP + + ++ +++ D+ND P FS + F + EN+ G + TVTA D D+ N ++ Y +I+ + S+ P G+I +K + E+ + V A D+G P +S TV + I+D NDN P S+ T + GY +G V A+D D G N+ + Y I E F + + ++ +S D H LVI+ CD G+P
Sbjct: 34 VSEEVKAGTVVGNVAKDLNINVQDLEARMFRIVSSRK---SFDVSLKTGALFVTDRIDREALCSTIKKCSMHIEAMAQNPLKLFRIEVHIMDINDNAPLFPVSKQILNITELSAVG-EKFTLPL--AEDPDTGSNAVKNYKL------SPNEYFSLNVQNGEDSGSVELVLQKALDRETQSVIHLILTAIDGGKPPLSGTTEIAILILDVNDNSPVFSQSLYKV-KVKENAAFGTKVLSLSATDLDEGLNSEITYAIIRQGTLSANEYFSLNVQSGGEQNISPQLVLQKALDREKQAT-VQLILTALDGG--RPHRSGTLDLSINVIDVNDNTPAFSKEMYKV-------SVLENTLPGTPVI-KLNATDLDAGLNGEIVYSLISHGKEKWADIFAINSITGEITVKGPLDREDTAAFELHAQAQDKGSSPRASHCKVLIEVLDVNDSPPVISVTSLTSTVREDATTGTAVGLITIADNDIGKNGEVSAKVKGTGP--FALQASYKNYYSLVVNGPLDREDMPQYSVTILATDKGTPPLSSSIVLAVDIADVNDNAPRFSDIVTVFYVKENSPSGNIIATVTAQDPDVNENAQIVYSLINRKNMDSSWMSMVDINPVS------GDIYSKQSFNYEEVKSFQFKVQATDSGAP-PLSSNVTVNVFIVDENDNRPVILPPYSEAGSLNTENIPYSAEAGYFVGKVRAIDADSGYNALLSYHITEPKGNNLFRIGSSSGEIRTKRRMSDNDLKTHPLVITVCDHGEP 765 HSP 2 Score: 134.806 bits (338), Expect = 1.507e-31 Identity = 108/358 (30.17%), Postives = 179/358 (50.00%), Query Frame = 2
Query: 1625 IVFQILDRNDNSPKFTRVFH-FRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-------SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRII-SDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLDFGENSEIVYQIEEGNPYGY---FSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPP 2650
I I+D NDN+P F + E ++V F +A D D N+ +++ NE +F ++ S ++ ++ LDRE ++ + A DGG PP +GT + I ++D+ND P FS SLY+ + ENA GT V +++A D D N+++ Y II S YF + + ++ ++V + LDREKQ+ L + A+D G P+ + T + IN+IDVNDN P F +K ++ + E+ G + + A DLD G N EIVY + + F+ N+ ++ + L ++D +L A DKG P+ S+ KV+ + + + + PP
Sbjct: 116 IEVHIMDINDNAPLFPVSKQILNITELSAVGEKFTLP-LAEDPDTGSNAVKNYKLSPNE--YFSLNVQNGEDSGSVELVLQKALDRETQSVIHLILTAIDGGKPPLSGTTEIAILILDVNDNSPVFSQSLYKVKVKENAAFGTKVLSLSATDLDEGLNSEITYAIIRQGTLSANEYFSLNVQSGGE--QNISPQLVLQKALDREKQATVQLILTALDGGRPHR-SGTLDLSINVIDVNDNTPAF---SKEMYKVSVLENTLPGTPVIKLNATDLDAGLNGEIVYSLISHGKEKWADIFAINSITGEITVKGPLDREDTAAFELHAQAQDKGSSPRASH-----CKVLIEVLDVNDSPP 459 HSP 3 Score: 85.8853 bits (211), Expect = 1.678e-16 Identity = 113/466 (24.25%), Postives = 201/466 (43.13%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI----GNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSD---KEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQ--ILDRNDNSPKFTRVF-HFRVLENASVP-----NMFVGEVMAVDKDAERNSKIEFQII---GNEEHFFQI-DSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVV 1951
L++ ++D+NDN P++ ++ VS E N L + A D D N +I Y L + ++ I S E+ +DRE +EL A+D GS R +++I++LD ND+ P+ + + E+A G ++ D D NG+++ ++ K + F + N +++V +D + + + ++LA D G P + + + + D ND P VT N P S +++A + +DPD + SL N M +S D I + +F+ EE + + D S ++ I+D NDN P + L ++P FVG+V A+D D+ N+ + + I GN + F+I SSG++ TK+ + + + + I D G+P + T V+++VV
Sbjct: 339 LSINVIDVNDNTPAFSKEMYKVSVLE---NTLPGTPVIKLNATDLDAGLNGEIVYSLISHGKEKWADIFAIN-----SITGEITVKGPLDREDTAAFELHAQAQDKGSSPRASHCKVLIEVLDVNDSPPVI-SVTSLTSTVREDATTGTAVGLITIADNDIGKNGEVSAKV---KGTGPFALQASYKNYYSLVVNGPLDRE-DMPQYSVTILATDKGTPP---LSSSIVLAVDIADVNDNAPRFSDIVTVFYVKENSP--------SGNIIATVTAQDPDVNENAQIVYSLINRKNMDSSWMSMVDINPVSGDIYSKQSFNYEEVKSFQFKVQATDSGAPPLSSNVTVNVFIVDENDNRPVILPPYSEAGSLNTENIPYSAEAGYFVGKVRAIDADSGYNALLSYHITEPKGN--NLFRIGSSSGEIRTKRRMSDNDLKTHPLVITVCDHGEPSLSAT--VSVDVV 776
BLAST of Protocadherin 1b vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 238.424 bits (607), Expect = 3.018e-64 Identity = 210/710 (29.58%), Postives = 335/710 (47.18%), Query Frame = 2
Query: 506 VVTVKNRIDRESLCPN----QINCDIMLRFFISPSYVSKSLNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI----GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP--TFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKP 2575
+ T NRIDRE LCP C + I P+ + + ++I+ D NDNAP +P S V++ + E + SR I A DPD+ NS Y L NG++ G+ I + +L+ + +DREQ D Y + + ED GSP+++ + L + + D NDN P+F ++ + + E++ +G + + A DAD AN +I Y Q + + G I V++ +D + + SVLA DG+ R T V I V D ND P I + TN ++ + N+ +A I V D D V C + + L+ V D ++ + A D E I+ D + +++ + ++ D NDN P FT+ V V EN ++++ + A D+D+ RN++I +Q +G FF +D +G + +V DRE+ E+F T+ A+D G V + ++D ND P+F+ + ++F +SEN ++VG +T D D N + I++D F + Y G I + DRE+QS Y V A+D+GHP +S V IN+IDVNDN P + SN + + + G + V AVD D G N+E+ Y I GN G F + + L ++ D H+LV++ D G P
Sbjct: 85 IFTTSNRIDREKLCPGPSYEDSECSFEIEVVILPNDYFRLIKIKIVVKDTNDNAPMFP--SPVINISIPENTLINSR-FAIPSATDPDMGPNSVYKYELV--NGQSAFGL-DIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVH-IPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALNSTTGLITVQRPLDREE-TANHKLSVLASDGSSSSARAT----VTINVTDVNDNAPNIDLRYIISP--TNGTVLLSEKDPVNTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVY--DNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELTVSENNKR-DLYLTTITATDEDSGRNAEIVYQ-LGPNASFFDLDRKTGVLTASRVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVSLSILNDNENFILDPY---------------TGVIKSNVSFDREQQSSYTFDVRAVDSGHP-PCSSAAKVTINVIDVNDNPPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIVNGNNKGLFRIDPVTGNITLEEKPTEADSGLHRLVVNISDLGYP 760
BLAST of Protocadherin 1b vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 230.72 bits (587), Expect = 6.945e-63 Identity = 203/749 (27.10%), Postives = 340/749 (45.39%), Query Frame = 2
Query: 509 VTVKNRIDRESLCPNQINCDIMLRFF--ISPSYVSKS--------LNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNG-KTDNGVWKI--------------KYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-----GNNGNIMVR--KNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASK--SIVFQILDRNDNSPKF---------TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEF---QIIGNEE--HFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEF------SLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKT--SNKTVFSIQTTESVGYEIG-TVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKG 2569
++V R+DRE+LC + + F + + ++K L+V++L DIND+AP++ VS +E E R + + +A DPD NS Y + +G G + + D R L + +DRE V YEL+L ED G+PK +GS+ L I ++D NDN P+F +++E++ +G + + A D D NG I Y + S G G + VR + +D + + + V+A DG + ++ V + + D+ND P V + + L + I + S + + I V DPD G V L L SP+ +F + D EE V +L D+ SK +++ ++D NDN+P F V+ + EN + + ++A D D+ N I F ++ G E F ++ +G++ LDRE+ ++ +++ A DGG P + +V + V+D ND P F + +Y+F + E +GT VGTV+ D D N ++ ++ R + + + P ++R T +LDRE + Y L+V A+D+G P + +++ V I + D NDN P + +N T ++T G +G +V A D+D G+N +Y+I GNP G F N + L L +S D+ H+LV+ D+G
Sbjct: 83 LSVALRLDREALCMEEPDACRSTGFMHTVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEA---VGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRET-MPVHRLVVVARDGG--QLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLEFPTGAEL--ASPNKVQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVL-NLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLV--REAGPDWIGGAGDTPGGVVR-------TLVVLDREDRVQYELSVRAVDSGRP-ALSASCRVSITVSDTNDNAPVITSPNTNDTWKHVRTFSPAGMLVGVSVTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRG 812 HSP 2 Score: 104.76 bits (260), Expect = 5.177e-23 Identity = 127/509 (24.95%), Postives = 221/509 (43.42%), Query Frame = 2
Query: 479 CLHIDPETHVVTVKN--RIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNK----LESRT-IHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIF-------DRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIED----QKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL---SNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKS--IVFQILDRNDNSPKFTRV------FHFRVLENASVPNMFVG-EVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGG 1906
LH+D T +VTV+N ++DRE++ +++ +S S S ++ VE+ D NDNAP + + + G K L S T + + DPD+ + +D L+ G K+++ T+R ++D E+ Y + ++A D G+PK + L LII ++D NDN P+F Y L EN G V L + A DAD NG IT+ + + + +E F++ G + + +D + ++ ++ SV A DG + + V + V+DEND P + + + +E E + + + D D G V+ +L + D + +P + + DRE++ ++ + D S S + + D NDN+P T H R A M VG V A D DA N + ++II GN + F +++ SG + + + + + + +D G
Sbjct: 324 ALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLSRS-ASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLEFPTGAELASPNKVQFLLKTTR--------LLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMR-YELSVEACDGGSPQ--RKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQ--FFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGV---VRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVITSPNTNDTWKHVRTFSPA---GMLVGVSVTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRG 812
BLAST of Protocadherin 1b vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 216.853 bits (551), Expect = 3.656e-58 Identity = 203/729 (27.85%), Postives = 337/729 (46.23%), Query Frame = 2
Query: 479 CLHIDPET-HVVTVKNRIDRESLCPNQI---NCDIMLRFFISP-------SYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPI-KVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKAS--------EYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRD---PLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNND-KMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASK--SIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPT--FKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKG 2569
+ ++P T + ++DRE+LC Q C + ++ + P + +NVE DINDNAP++ VS E N + I A DPD N Y L + T + +++ ++ + + K +DRE+ +YE+ L A D GSP +GS L I + D NDN P+FD+A+ ++ EN+ +G + + A D D +N ++ YR+ F + N ++ + ++ +LA D PE T V + +++N EI RD P+ I E + N +A I V DPD G V+C + N + +L++++ ++ + D E K+ V I D + S+ S+ ++LD NDN+P FT + V EN + + V A D+D ++N+++ + + + F +D +G + + LDRE+ ++ TILAKD G P G V + V+D+ND +P FSL+ ++F ++EN ++VG VT D D N +++ I+ ++ +S MIR + G DRE++ +Y+L V A D G P +ST V I+++D+NDN P SN T + G + V AVD D N+E+ Y I GNP+ F + + L L++ H+LV+ D G
Sbjct: 85 LVRVNPRTGELFAAGRKMDREALCGGQDPGDECHVDVQVGVLPVQPGPFFKLIEVRINVE--DINDNAPAFAAPVLTVSVPE---NAPAGKRFPIQPANDPDSEANGVRRYELLPSDPATVSAFELSVTETANGEKVPYLVVRKSLDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNV-EIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEI------RDIVAPVNGVIYISEASHV-NLPVALITVSDPDIGANGAVTCYIYNPEVPFQLKKLT-YPNQYLLETRETLDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVFTEPTYKVSVPENNVIGKHLI-TVSATDRDMDKNAEMVYFLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDEGENGRVRLSIL----GTDNRQLFSIDPESGMIRSNVG-------FDREQRHYYVLEVQATDGGEP-VRSSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTLPGTIVTEVSAVDNDAEINAELRYHIVGGNPHNLFHIDPVIGNITLMEPLTETHHGLHRLVVRVSDIG 786
BLAST of Protocadherin 1b vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 218.779 bits (556), Expect = 6.728e-58 Identity = 214/783 (27.33%), Postives = 353/783 (45.08%), Query Frame = 2
Query: 368 EEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDY-FLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESY-FQYSSSLPFQMIRHDRGEIVTKYLLDREK------QSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVG--YEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPPNPDTFSDS 2674
E G+ ++ +T ++ ++ Y I GN L +D T +VT ++DRE +N + P SL V +LD+ND P + Q V + E N L + A D D+ EN + Y F D + + DS T + + +K +DRE+++ Y L++ A+D GSP + ++ + + D NDN P+F +Y+A+ L EN G TV+A D D ANG + Y++ A+ + G + R ++D + +Q V A+DG R V I V D D P RD + + EN V +++ + D ++ +S + + + F AI DREE++ ++ ++ S+ + D N+++P F R + + E+ V + F V A DKD+ +N +++++I GN F I G++Y + LDRE E++++T+ A D G P + + V + V+D+ND KP F+ S Y F E +G+ VG V A D D +N + Y F K F+ S + G I + + DRE + + +VVA D G P TV++ + DVNDN P F K+V+ +ES ++ V A D+D G N + Y I EGN G F+ + ++ L L +++ + LV+SA D G ++PL + V Q + +E NP F++S
Sbjct: 352 EGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDL-GWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQG-AQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVE---NSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYRE---MFRLDSLTGK---VTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASIL-ENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAVSTRVSLDREERAV-YQLQVTALDGG--HLRARSPAIVTITVADAQDTPPTF-----ARDDYSF--VVFEN-VAPGTLVGSVSASTLDLNA-NVTYLIVSGDQRGSFSIEWSGGRIFTANAI---DREEQAFYQLRVVANSGGV-AGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFF-SVRATDKDSGKNGEVKYEIGEGNGGEKFGIFPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTY-----SFEKPQVNFELDS---------ETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFA---KSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLGSLDREETASYTLVVSATDSG-----TSPLAASCTVAVQVL---DENDNPPRFTES 1080 HSP 2 Score: 200.675 bits (509), Expect = 2.871e-52 Identity = 194/691 (28.08%), Postives = 322/691 (46.60%), Query Frame = 2
Query: 593 PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRR--IELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI-IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKD---PDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQA---YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDR--GEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPLWVTIKVV 2617
P+Y ++ + V + D+NDNAPS+P+ V F+ + R + +D A D DV N + K +G + ++ ++R + L +DRE Y L + AED GSP+R G L++ + + D NDN P F++ Y A+ ++E++ +G + +D + G + + + G + R+ +D++A + + S+ A DG +G VI ++D ND P I V++ P A ++ +V A + V D P G VS + N++ +P ++L +A+ DRE M + IL D +A+ S+V + D ND++P+F + L + +V +V A+D D+ N+K+ + I+ GN+ +F +D S+G + T +DRE + I A+D G PKT +T+ ++D+ND P F+ + Y + EN+ G V +V+A D DL N ++Y F + QY +M R D G++ T LDRE+ Y L V A D G P ST V + + D+NDN P F + SI E G + TV A D D G N + YQ+ G+ F N + L +++ ++L ++A D G + +P VTI V
Sbjct: 3 PTYPTE-VRVVVGDVNDNAPSFPEPG--VMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEG---RLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRAS-VAEDSPVG-----AALRDLLHRGRGPLAVPFDPK----------TGMVSTRQPLDFEA-RRQYTLSLRAADGGNPPL--SGRATAVIQLLDVNDNDPAIRFVYL----PPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSI-VGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRY-----NFDPDMPAQYR-----EMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSP-PLGSTAKVTVVVGDLNDNHPVFYPV-QYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGD-AARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGH-LRARSPAIVTITVA 649 HSP 3 Score: 197.593 bits (501), Expect = 2.714e-51 Identity = 200/744 (26.88%), Postives = 330/744 (44.35%), Query Frame = 2
Query: 362 IFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDA-----GVKGFQFSVLAIDGA---PEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDRE-KQSHYLLTVVAIDNGHP--NSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDH 2539
+FE GT + ++ + ++ + +Y I G++ I+ + N IDRE Q LR + V+ +V +L D+N++AP + + S VS E E + SR + +A D D +N ++ Y + + NG G++ D R EL DRE + Y L + A D G + S+ + + +LD NDN P+F+ + Y + E +G + V A DAD +NG +TY E + + + G I + D +A G F FSV+A DG P + R T V + V D ND P+ V + A + + + L + D D G + +++ ++ V S QI + + DREE + + + D + AS ++ Q+LD NDN P+FT + LE+ V + + + A D+D + + + I+ GN F ID S+G ++ + LD E + + + A+DGG PP++ ++ + V D ND P F SI EN IGT V TVTA D D N ++ Y I+ +F ++F I + GEI T +DRE + +TV A D P ++ V + + D NDN P F T + + G +GT++A D D EN+ + Y + G+ F + + + ++ L ++ H
Sbjct: 667 VFENVAPGTLVGSVSASTLD--LNANVTYLIVSGDQR-GSFSIEWSGGRIFTANAIDREEQAFYQ------LRVVANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDE--PVNSRFFSV-RATDKDSGKNGEVKYEIGEGNGGEKFGIFP---DGQLYVRYEL------DRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFH-FCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVNFELD-SETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRAT----VQVFVQDVNDNPPQFAKSVYQ--------ASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTG--QITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLI-TLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYS-IARQFPPGAHF---------TIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPTAILVD-GLRAAAGSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTGIIETSTELDRESGH 1361 HSP 4 Score: 170.244 bits (430), Expect = 6.922e-43 Identity = 183/666 (27.48%), Postives = 287/666 (43.09%), Query Frame = 2
Query: 599 YVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKD--RNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGP----IFDRAKYYANKLSENANIGFVALTVSAKDADY-LANGKITYRIEDQKASEYFNIGNNGN-----IMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL-SNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQ----IIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD 2533
Y +NV + D NDN P++ + A+ V E+S + L+D G+ G + +D T P+ R Q Y L L A D G+P +G +IQ+LD NDN P ++ + + E+A G VA V+ DAD ANG+++ I +F + G + V +D + + + ++LA D G P ++ +V+ V D ND P + PA S + + D D G + S+ S ND L S + + DRE S ++I +DQ TA S+ +LD ND P FT+ + S+P +FV V A D D N + + + F++DS +GK+ T + LDREE E++ + + A+D G PP T VT+ V D+ND P F Y SI EN GT+V TVTA D D AN ++Y++ + ++ FQ ++ G + T+ LDRE+++ Y L V A+D GH + S V I + D D PTF + + F + + G +G+V A LD N+ + Y I G+ G FS ++ + + +++
Sbjct: 117 YGRLQVNVTVQDANDNPPAFEK-----------------------PAYRASVAEDSPVGAALRDLLHRGR---GPLAVPFDPKTGMVSTRQPLDFEARRQ---YTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRER-IPMYNLTILASDNGKP--VARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPA--------GSYVKDVTAMDADSGLNAKLRYSIVSGND---LGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAAR---FQVNAVT---------GAVSTRVSLDREERAVYQLQVTALDGGHLRAR-SPAIVTITVADAQDTPPTFARDDYS-FVVFENVAPGTLVGSVSASTLDL--NANVTYLIVSGDQRGSFSIEWSGGRIFTANAIDREE 723 HSP 5 Score: 165.236 bits (417), Expect = 2.267e-41 Identity = 184/689 (26.71%), Postives = 292/689 (42.38%), Query Frame = 2
Query: 584 FISPSYVS-KSLNVEILDINDNAPSW--PQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIG----FVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNN-----GNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASK-----SIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHF----------FQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSV-LSKQDDHKLVISACD 2563
FI P S + + + D+NDN P + P+ E E N E I A D D +N+ + Y + G + + S L + +DRE+ Y L + A D L + + D NDN P F R Y + + A G V TV A DAD G++TY + + S++ + G + V + +D ++ + A DG + + V+D ND P + + D L E + + + L I D D G + S+S+ D V + Q+ DRE +S + + D+A + ++ + + D NDN+P FT E++ V V V AVD D+ RNS +E+ + + E F +++ +G++ + LDRE + + +T+LA D G PP T T + + V D ND P F YE +I+E+ GT V ++A D D AN +++Y I S + + F+ L G + LDRE+ + Y L V A D G P + + T +V++ + DVND P F+ S TV + + T+ I V A D D G + ++ Y GN G FS + +L S+ Q H L+I+A D
Sbjct: 1491 FIRPPMSSFNQVEISVEDVNDNPPVFAVPEME-----LEVEENTGEGEVIFTLSATDADQGQNALVTYSVL----SGSEGAFVVDAASGV-----LRASRRLDREERASYLLTVRASDG---THATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRAC-YVLRARATDGG----GLAATARLYVNVLDANDNAPSV-----QNDSLAAE---VPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVG---NDGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPV-GAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGD--FRLDPVL---------GTLAVARPLDRERTASYELAVRARDGGGP-ARSDTASVRVTLSDVNDCSPAFQLSPYTVHARENTQGPPVLILQVVARDDDLGSSGQVTYAAAGGNDGGAFSVSPDGHVHLLRSLDREAQPQHVLIITATD 2133 HSP 6 Score: 114.775 bits (286), Expect = 7.218e-26 Identity = 106/379 (27.97%), Postives = 171/379 (45.12%), Query Frame = 2
Query: 1547 FDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTR-VFHFRVLENAS----VPNMFVGEVMAVDKDAERNSKIEFQIIGNEEH------FFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGH--PNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIE---------EGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCSNP-LWVTI 2608
DREE++ + + D + T ++ + + D NDNSP+F+R + F V E+A+ +G V+A D D+ ++ + + +E+ F +G + + LDRE + + A DGG T + + V+D ND P + E+A GTS+ ++A D D N ++++ I S E F + G++ LDRE+QS Y L V D P +S V + + DVNDN P F TS ++ + + + VG + TV+AVD D G NS + Y + G G F+ NT ++ L L ++ + L + A DKG+PP S L VT+
Sbjct: 1578 LDREERASYLLTVRASDGTHATDAR-LSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGG--LAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSG--DPEGRFAVGND----------GQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAF-TSPRSALAPEDSP-VGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTV 1939
BLAST of Protocadherin 1b vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004042.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004042.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 187.578 bits (475), Expect = 3.854e-48 Identity = 187/712 (26.26%), Postives = 316/712 (44.38%), Query Frame = 2
Query: 368 EEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKP---EIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL-SNNDKMRLEQVSPSDKEFQIL---------AIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEG 2458
E+ GT I V+ +++ + SY + G L + +DP++ V+V +D E ++ + F P L V++LDINDNAP + E RTI + A D D N Q+DY + D N V+++ +S E+ + +DRE V YEL + A D GSP + +++++I + D+NDN P F + ++ + E+A +GF L VS DAD N IT+ + D S F+I + G I V + ++ + G+ V A D A T +V I+V D ND P + ++ +P E +++A + D D G V + S + R+ + S + L + AN ++ + +D + + ++ ++ I+ N N+P+F R + + + ++ AVD D + N +I + ++ GN F +D+ G ++ + L + F+VT+ A+D G PP + I V + N + P F+ E S+ EN G+S+ VTA D D N + Y I S S F S + G+++ LD E + Y L+V A D G + T + V I++ DVNDN P S+ + S G + ++AVD D N+ +Y +++G
Sbjct: 243 EDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGF-PPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPE----NTPPRTIVVLTAVDKDSGINGQVDYSIIDGN---IGNVFRVNPNSG-----EIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRF--TQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDP--SLPFSIHPSTGEITVSRRLNRE-DRSGYAVKVRASDPA-----WTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGE-----------ALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMD---RGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGS--GLFDISRA---------SGDVLLVGELDYETEKLYNLSVCAADGGW-QAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPS-GTTVLVMDAVDADSPSNAVTMYSLDDG 902 HSP 2 Score: 186.037 bits (471), Expect = 1.114e-47 Identity = 187/714 (26.19%), Postives = 310/714 (43.42%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTE-FEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELM----PIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGA--PEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVL-ENASVPNMFVGEVM-AVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSY-TSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGEN-SEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPK 2581
I P T +TV R++RE ++ + +R VS + + + D+NDNAP + Q + + F E EG L +R A D D N Q+ +F++ +T+N +++ DS + + P ++ Y ++ A D G P + + I I+ N N P F R +Y + ++ G L +SA D D NG+I Y + AS F++ G + +R ++ DAG F +V A D P R T +I V +EN P PL E ++ EN +S LA + D D G + S+++ D L +S + + +L + D E + + + + D + T + + D NDN P ++ V+ ENA P+ VM AVD D+ N+ + + E F ++ +G + T+ LD E + + +T+ A + D T V +++ +N++ P F Y F +SE+A +G VG+V A DRD + + Y + + SK F + H GEI+ LDRE+++ L V+A + G + V + I D ND P +S + SVG + V A D D + I+ GN FS N +++ S L ++ + L + A D G+PP
Sbjct: 487 IHPSTGEITVSRRLNRE----DRSGYAVKVRASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARV----SASDADDGANGQVFFFMRS---QTEN--FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERY-STPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSI-FSVTVEARDRGRPPLSSRAT----AIISVTEENQYAPRF-----AHPPL--ELSLPENHPAGSS-LARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGD--VLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENA--PSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKG----------FSVNEHT-GEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND--PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPA 1156 HSP 3 Score: 147.517 bits (371), Expect = 6.794e-36 Identity = 148/579 (25.56%), Postives = 247/579 (42.66%), Query Frame = 2
Query: 872 KVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETE---------KFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKG 2569
+ +D E YEL++ A D+G P + L+L + +LD NDN P F ++++A K+ EN + + ++A D D NG++ Y I D F + N+G I +D + V ++ +V A D G+P ++ +V+I V DEND P + + E+ + VL + D D G ++ SL D + PS E I +RE++S V + D A+ T S + + D NDN+P+F + ++ S V V A D D N ++ F + E+F SG++++ + L + K++ + A D G PP + VTI +V N P F Y ++ GT + ++A+D D N ++ Y ++ S+ F + G + + L + S + +TV A D G P +S T I++ + N P F S+ G + V A D D G N IVY I G+ G F + + ++L L + + + L + A D G
Sbjct: 292 RALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWA-KVPENTPPRTI-VVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRE-NVASYELTVKATDRGSPTQHCTV---KVLISVTDENDNSPRFTQIFSAH--------VREDAAVGFPVL-RVSTLDADEGPNAAITFSLL--DPSLPFSIHPSTGE--ITVSRRLNREDRSGYAVKVRASDPAW-TVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRR--FDVDAG----------GFLHLRASLAGDAGSIFSVTVEARDRGRP-PLSSRATAIISVTEENQYAPRFAHP-PLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGG 836 HSP 4 Score: 142.895 bits (359), Expect = 1.941e-34 Identity = 146/567 (25.75%), Postives = 247/567 (43.56%), Query Frame = 2
Query: 932 GSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEP--AIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFT---RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII--GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTE--SVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLW 2599
G P+ TG+ + + + D+NDN P F A+ A + E+A IG V+A DAD N I+YR+ + +F++ + G I+ ++D + G + + V A+DG P + +V+ V D ND P + N P A + + + + + +D D G + SLS + V P R++ ++ V + +A ++ + D + P+F R F FR P + V A + + R + + + GN F +D SG++ + LD E + + + A+D G PP + + ++V+DIND PEFS S + + EN T V +TA+D+D N ++ Y II F+ + + GEI + LDRE + Y LTV A D G P + T V I++ D NDN P F +FS E +VG+ + V +D D G N+ I + + + P FS + ++ ++ L+++D + + S+P W
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRA-AVPEDAPIGSDVALVNATDADAGLNAIISYRL--RGGDGHFSVNPSTGQIITTASLDRE-GRESYVLEVTALDGGPTPGLSS-SATLVVAVTDVNDHTPRFL----------NAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGF-SVDPRRGVIHAARALQGPRDDLTL-TVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFR---EDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIV-VLTAVDKDSGINGQVDYSIIDGNIGN--VFR---------VNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHC-TVKVLISVTDENDNSPRF----TQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLD--PSLPFSIHPSTGEITVSRRLNREDRSGYAVKV-------RASDPAW 519 HSP 5 Score: 136.346 bits (342), Expect = 2.043e-32 Identity = 162/639 (25.35%), Postives = 281/639 (43.97%), Query Frame = 2
Query: 620 VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKD----QAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII--GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPAN-TKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGE--NSEIVYQIEEGNPYGYFSFNTQNKKLI 2506
+ + + N AP + +S E N ++ A D D N I Y + +G +G++ I S +++ + +D E +Y L + A D G +T + I + D NDN P+ + + YY + ENA G L + A DAD +N Y ++D +A + G + + +DY+ + ++ +V A + P+ + + +V + + N+ P + + + + +E A + V SV A D D G V L + R + S ++ +I+ + DRE ++ + ++ K+ + ++ + I D ND + ++H RV E ASV VG V A D D+ + +I GN F I++ +G + LDRE +N+T++A D G+PP TGT +V + + D+ND P S + ++EN G +V + A D DLP N ++++ + YF SSS G + T +DRE++ + L V D G P TST T+ ++++D NDN P+ + + + G IG V D D + N ++ P+ FSF +LI
Sbjct: 743 ISVTEENQYAPRFAHPPLELSLPE---NHPAGSSLARVTATDTDAGVNGAIVYSIASGDG---SGLFDISRASG-----DVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYP-VIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYET-KQTYELTVRAFN-YPDTFHYS-TAQVHVQITGVNEYFPRFVQR--EYNFVVSESAPVGAPV--GSVFA----TDRDAGIDGTVFYMLFG--ESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDPPVFSSALYHGRVSEAASVGTHVVG-VSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSAK--VTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSS----------GLLKTARPIDREQKPEFHLPVAIADAGSP-PLTSTVTLHLSVLDQNDN-PSEARDVRVHVNYFGSPFPGGFIGDVRPRDPDISDRFNCDLTS-----GPFNVFSFQPNTCRLI 1336 HSP 6 Score: 121.324 bits (303), Expect = 7.322e-28 Identity = 174/723 (24.07%), Postives = 291/723 (40.25%), Query Frame = 2
Query: 605 SKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAF----DPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNG-SPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGV-----KGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKR----------DPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMR-LEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQI--LDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYE--IGTVEAVDLDFGENSEIVY----------------QIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPN 2641
+ ++ V + D NDN P + E E I D A D D N+ I Y L+ +G + ST +++ +DRE + Y L + A D G +P + S L++ + D ND+ P F N +VA S+ A G + + + A + G NG++ + AG +G + A+ G ++ T + V D + VT R P + E++ ++ + + G VS L++ + + V P E + D E + ++ + +D + S + ++ LD NDN+P+F+ F +V EN P + + AVDKD+ N ++++ II GN + F+++ +SG++ + LDRE + +T+ A D G P + T V I V D ND P F+ ++ + E+A +G V V+ +D D N + + ++ SLPF I GEI L+RE +S Y + V A D ++T +T V I + DVNDN P F +T + I+ E E + V A D D G N ++ + +I P Y LN + V++A D+G+PP S+ V +I++PN
Sbjct: 9 TGTVTVLVEDENDNLPRF-------GAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGH-------FSVNPSTG---QIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRF-------------LNAPYVAYAPSSAPA-----GTAVFAVTARDA----DAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPRDDLTLT------VRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITV-VAARSSRRAG--PVSYHLASGGNLGDVFAVDPQSGEVSVHRA--LDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPEN--TPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFT-QIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLD------------PSLPFS-IHPSTGEITVSRRLNREDRSGYAVKVRASDP----AWTVSTDVTIVVDDVNDNAPRF---GQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNK-------YSFVVTAMDRGRPPLSSD------ATVTINIVVPN 645 HSP 7 Score: 102.834 bits (255), Expect = 3.158e-22 Identity = 74/258 (28.68%), Postives = 121/258 (46.90%), Query Frame = 2
Query: 1904 GDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ---DDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPPNPDTFS 2668
G+P TGTG VT+ V D ND P F + ++ E+A IG+ V V A D D N + YR+ + +F + S G+I+T LDRE + Y+L V A+D G +S+ T+ + + DVND+ P F + ++ ++ G + V A D D G N ++ + + G F+ ++ ++++ + Q DD L + D G PP+ S VT++ + P P P +FS
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL----RGGDGHFSVNPST---------GQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYA-PSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAG---FSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPPR-SAVTTVTVR-FRDAGEFPRFAPGPRSFS 240
BLAST of Protocadherin 1b vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 187.193 bits (474), Expect = 4.598e-48 Identity = 187/712 (26.26%), Postives = 316/712 (44.38%), Query Frame = 2
Query: 368 EEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKP---EIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL-SNNDKMRLEQVSPSDKEFQIL---------AIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEG 2458
E+ GT I V+ +++ + SY + G L + +DP++ V+V +D E ++ + F P L V++LDINDNAP + E RTI + A D D N Q+DY + D N V+++ +S E+ + +DRE V YEL + A D GSP + +++++I + D+NDN P F + ++ + E+A +GF L VS DAD N IT+ + D S F+I + G I V + ++ + G+ V A D A T +V I+V D ND P + ++ +P E +++A + D D G V + S + R+ + S + L + AN ++ + +D + + ++ ++ I+ N N+P+F R + + + ++ AVD D + N +I + ++ GN F +D+ G ++ + L + F+VT+ A+D G PP + I V + N + P F+ E S+ EN G+S+ VTA D D N + Y I S S F S + G+++ LD E + Y L+V A D G + T + V I++ DVNDN P S+ + S G + ++AVD D N+ +Y +++G
Sbjct: 243 EDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGF-PPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPE----NTPPRTIVVLTAVDKDSGINGQVDYSIIDGN---IGNVFRVNPNSG-----EIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRF--TQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDP--SLPFSIHPSTGEITVSRRLNRE-DRSGYAVKVRASDPA-----WTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGE-----------ALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMD---RGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGS--GLFDISRA---------SGDVLLVGELDYETEKLYNLSVCAADGGW-QAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPS-GTTVLVMDAVDADSPSNAVTMYSLDDG 902 HSP 2 Score: 185.652 bits (470), Expect = 1.364e-47 Identity = 187/714 (26.19%), Postives = 310/714 (43.42%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTE-FEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELM----PIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGA--PEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVL-ENASVPNMFVGEVM-AVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSY-TSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGEN-SEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPK 2581
I P T +TV R++RE ++ + +R VS + + + D+NDNAP + Q + + F E EG L +R A D D N Q+ +F++ +T+N +++ DS + + P ++ Y ++ A D G P + + I I+ N N P F R +Y + ++ G L +SA D D NG+I Y + AS F++ G + +R ++ DAG F +V A D P R T +I V +EN P PL E ++ EN +S LA + D D G + S+++ D L +S + + +L + D E + + + + D + T + + D NDN P ++ V+ ENA P+ VM AVD D+ N+ + + E F ++ +G + T+ LD E + + +T+ A + D T V +++ +N++ P F Y F +SE+A +G VG+V A DRD + + Y + + SK F + H GEI+ LDRE+++ L V+A + G + V + I D ND P +S + SVG + V A D D + I+ GN FS N +++ S L ++ + L + A D G+PP
Sbjct: 487 IHPSTGEITVSRRLNRE----DRSGYAVKVRASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARV----SASDADDGANGQVFFFMRS---QTEN--FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERY-STPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSI-FSVTVEARDRGRPPLSSRAT----AIISVTEENQYAPRF-----AHPPL--ELSLPENHPAGSS-LARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGD--VLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENA--PSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKG----------FSVNEHT-GEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND--PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPA 1156 HSP 3 Score: 147.517 bits (371), Expect = 7.441e-36 Identity = 148/579 (25.56%), Postives = 247/579 (42.66%), Query Frame = 2
Query: 872 KVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETE---------KFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKG 2569
+ +D E YEL++ A D+G P + L+L + +LD NDN P F ++++A K+ EN + + ++A D D NG++ Y I D F + N+G I +D + V ++ +V A D G+P ++ +V+I V DEND P + + E+ + VL + D D G ++ SL D + PS E I +RE++S V + D A+ T S + + D NDN+P+F + ++ S V V A D D N ++ F + E+F SG++++ + L + K++ + A D G PP + VTI +V N P F Y ++ GT + ++A+D D N ++ Y ++ S+ F + G + + L + S + +TV A D G P +S T I++ + N P F S+ G + V A D D G N IVY I G+ G F + + ++L L + + + L + A D G
Sbjct: 292 RALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWA-KVPENTPPRTI-VVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRE-NVASYELTVKATDRGSPTQHCTV---KVLISVTDENDNSPRFTQIFSAH--------VREDAAVGFPVL-RVSTLDADEGPNAAITFSLL--DPSLPFSIHPSTGE--ITVSRRLNREDRSGYAVKVRASDPAW-TVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRR--FDVDAG----------GFLHLRASLAGDAGSIFSVTVEARDRGRP-PLSSRATAIISVTEENQYAPRF-AHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGG 836 HSP 4 Score: 142.895 bits (359), Expect = 2.073e-34 Identity = 146/567 (25.75%), Postives = 247/567 (43.56%), Query Frame = 2
Query: 932 GSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEP--AIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFT---RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII--GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTE--SVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLW 2599
G P+ TG+ + + + D+NDN P F A+ A + E+A IG V+A DAD N I+YR+ + +F++ + G I+ ++D + G + + V A+DG P + +V+ V D ND P + N P A + + + + + +D D G + SLS + V P R++ ++ V + +A ++ + D + P+F R F FR P + V A + + R + + + GN F +D SG++ + LD E + + + A+D G PP + + ++V+DIND PEFS S + + EN T V +TA+D+D N ++ Y II F+ + + GEI + LDRE + Y LTV A D G P + T V I++ D NDN P F +FS E +VG+ + V +D D G N+ I + + + P FS + ++ ++ L+++D + + S+P W
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRA-AVPEDAPIGSDVALVNATDADAGLNAIISYRL--RGGDGHFSVNPSTGQIITTASLDRE-GRESYVLEVTALDGGPTPGLSS-SATLVVAVTDVNDHTPRFL----------NAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGF-SVDPRRGVIHAARALQGPRDDLTL-TVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFR---EDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIV-VLTAVDKDSGINGQVDYSIIDGNIGN--VFR---------VNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHC-TVKVLISVTDENDNSPRF----TQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLD--PSLPFSIHPSTGEITVSRRLNREDRSGYAVKV-------RASDPAW 519 HSP 5 Score: 135.961 bits (341), Expect = 2.498e-32 Identity = 162/639 (25.35%), Postives = 281/639 (43.97%), Query Frame = 2
Query: 620 VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKD----QAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII--GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPAN-TKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGE--NSEIVYQIEEGNPYGYFSFNTQNKKLI 2506
+ + + N AP + +S E N ++ A D D N I Y + +G +G++ I S +++ + +D E +Y L + A D G +T + I + D NDN P+ + + YY + ENA G L + A DAD +N Y ++D +A + G + + +DY+ + ++ +V A + P+ + + +V + + N+ P + + + + +E A + V SV A D D G V L + R + S ++ +I+ + DRE ++ + ++ K+ + ++ + I D ND + ++H RV E ASV VG V A D D+ + +I GN F I++ +G + LDRE +N+T++A D G+PP TGT +V + + D+ND P S + ++EN G +V + A D DLP N ++++ + YF SSS G + T +DRE++ + L V D G P TST T+ ++++D NDN P+ + + + G IG V D D + N ++ P+ FSF +LI
Sbjct: 743 ISVTEENQYAPRFAHPPLELSLPE---NHPAGSSLARVTATDTDAGVNGAIVYSIASGDG---SGLFDISRASG-----DVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYP-VIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYET-KQTYELTVRAFN-YPDTFHYS-TAQVHVQITGVNEYFPRFVQR--EYNFVVSESAPVGAPV--GSVFA----TDRDAGIDGTVFYMLFG--ESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDPPVFSSALYHGRVSEAASVGTHVVG-VSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSAK--VTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSS----------GLLKTARPIDREQKPEFHLPVAIADAGSP-PLTSTVTLHLSVLDQNDN-PSEARDVRVHVNYFGSPFPGGFIGDVRPRDPDISDRFNCDLTS-----GPFNVFSFQPNTCRLI 1336 HSP 6 Score: 121.324 bits (303), Expect = 8.439e-28 Identity = 174/723 (24.07%), Postives = 291/723 (40.25%), Query Frame = 2
Query: 605 SKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAF----DPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNG-SPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGV-----KGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKR----------DPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMR-LEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQI--LDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYE--IGTVEAVDLDFGENSEIVY----------------QIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPN 2641
+ ++ V + D NDN P + E E I D A D D N+ I Y L+ +G + ST +++ +DRE + Y L + A D G +P + S L++ + D ND+ P F N +VA S+ A G + + + A + G NG++ + AG +G + A+ G ++ T + V D + VT R P + E++ ++ + + G VS L++ + + V P E + D E + ++ + +D + S + ++ LD NDN+P+F+ F +V EN P + + AVDKD+ N ++++ II GN + F+++ +SG++ + LDRE + +T+ A D G P + T V I V D ND P F+ ++ + E+A +G V V+ +D D N + + ++ SLPF I GEI L+RE +S Y + V A D ++T +T V I + DVNDN P F +T + I+ E E + V A D D G N ++ + +I P Y LN + V++A D+G+PP S+ V +I++PN
Sbjct: 9 TGTVTVLVEDENDNLPRF-------GAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGH-------FSVNPSTG---QIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRF-------------LNAPYVAYAPSSAPA-----GTAVFAVTARDA----DAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPRDDLTLT------VRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITV-VAARSSRRAG--PVSYHLASGGNLGDVFAVDPQSGEVSVHRA--LDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPEN--TPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFT-QIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLD------------PSLPFS-IHPSTGEITVSRRLNREDRSGYAVKVRASDP----AWTVSTDVTIVVDDVNDNAPRF---GQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNK-------YSFVVTAMDRGRPPLSSD------ATVTINIVVPN 645 HSP 7 Score: 102.834 bits (255), Expect = 3.153e-22 Identity = 74/258 (28.68%), Postives = 121/258 (46.90%), Query Frame = 2
Query: 1904 GDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ---DDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPPNPDTFS 2668
G+P TGTG VT+ V D ND P F + ++ E+A IG+ V V A D D N + YR+ + +F + S G+I+T LDRE + Y+L V A+D G +S+ T+ + + DVND+ P F + ++ ++ G + V A D D G N ++ + + G F+ ++ ++++ + Q DD L + D G PP+ S VT++ + P P P +FS
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL----RGGDGHFSVNPST---------GQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYA-PSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAG---FSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPPR-SAVTTVTVR-FRDAGEFPRFAPGPRSFS 240
BLAST of Protocadherin 1b vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9]) HSP 1 Score: 241.506 bits (615), Expect = 6.094e-65 Identity = 218/703 (31.01%), Postives = 333/703 (47.37%), Query Frame = 2
Query: 500 THVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIH-IDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIE--DQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKS--IVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG-NEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDH-----KLVISACDKG 2569
T V++ RIDRE+ QI+ + LR ++PS S+ V++ DINDN P +P + E ++ T + I+ A DPD N +DY + + + T + ++ K +DRE D Y+L + A D G+P G + I ILD+ND+ P+F + Y + ++EN G L VSA D D +NG I Y I+ +++ F++ + G I ++N+D++ + F+V+A DG K V I V+D ND P++ +T P + AI + N+ +A+I V D D ++N D +V F I DRE + + D+ + S ++ + D NDNSP FT + + + +V ++ A D D N + + I G N+ +FQ+D SG + T + LDRE+ +TI A+D G PKTG+ VT+ ++D ND KP F S Y+ +ISE A IG +V V+A D D N ++ Y I S F+ + G + TK LDRE +S Y TV+A D+G P S+ V++ I D+NDN P F + SI E G ++ V A D D G N+ I Y I GN G FS ++ + S L+ D L+ISA D G
Sbjct: 48 TGVISTTARIDRETTT--QIS--LQLRT-LNPSNQPISVQVQVDDINDNEPRFPTLYYTLRIRE----SMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTA--CPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGS-IAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVK-NSYTFNVIASDGGVPS--KNDLATVTINVLDTNDNSPQL--KITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVEFLGFYF-IQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFE---------LNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQ-LMSSVKVELTISDINDNAPVFYPV-EYFASIMENEPPG-KLLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVI---STLASLDHEVEEFFSLIISAKDGG 717 HSP 2 Score: 211.46 bits (537), Expect = 1.860e-55 Identity = 222/738 (30.08%), Postives = 331/738 (44.85%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVS-KSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKL---ESRTIHIDKAF----DPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID--GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQA--YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG-NEEHFFQIDSS-GKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVIS--ACDKGKPPKCSNPLWVTIKVVKQHILIPNEPP 2650
+D T V+ K +D E N +++ PS ++ + +LD NDN+P Q K+ G+K E+ I+ + A+ D D N NSQ + LK NG D G +K+++ +++ K +DRE V Y L L D G P R+ ++I + D NDN P F Y AN +SE A G L ++A D D NG ++Y I +F + +G + K +D + V ++ A D AP KTG V + +ID ND KP + K I E I +VL + D D G ++ +S++D + + + + DRE KS+ +L KD +S + I D NDN+P F V +F + P + +V A D D N+ I + IIG N F IDSS G + T LD E E F++ I AKDGG+ T +V + V++ D P F +Y F++ EN GT VG V A +D N + Y I+S + F S+ I D +DRE+++ YLL V+A G ++ TV I ++D NDN P F TS+ + I T VG + AVDLD G+N + YQ+ N G N+ + + L L+ D+ + + A D G PP+ S +TI + L N PP
Sbjct: 258 LDSSTGVIRTKQNLDFE--VKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSP----QLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTE--LKITNGD-DEGCFKVEFLGFYFIQLQ----KPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTAN-ISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQ-VSSVTITITAQDHGSAP----KTGSTTVTVTIIDGNDNKPRFMKSSYKG-------TISEGASIGATVL-QVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGKLL-QVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKD--KNGSISYAIVSG--DPTNLFLVDSTGGIIKINGD---------MDREEKAQYLLAVIA-RVGTVKPLSAQATVNIEVLDRNDNAPQFSTSS-VIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTS-NAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHST---MTIHIT----LSINHPP 944 HSP 3 Score: 198.749 bits (504), Expect = 1.832e-51 Identity = 198/749 (26.44%), Postives = 340/749 (45.39%), Query Frame = 2
Query: 437 STSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRF-FISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLT--NEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREE---KSMEKVDILCKDQAYNTAS----KSIVF-QILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLI------LNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQH 2626
S SY I G+ N +D ++ + +DRE Q ++ R + P ++N+E+LD NDNAP + S +V + +G L + ++ A D D +N + Y L + +W +STS I+L K+ D ++ Y + ++A D+GSP + ++ I I ++ P F + Y + L+ + + V A D D NG++ Y I F I G + +RK++ A + V A DG + + V I + D ND + + V+ T R + + P + +++++ L H KD IV +S+ ++ + QI DREE + V I+ + YN + K+IV + D NDN+P F+R + + S+P V + A+D D N+K + ++ + FF S+G+++ + LDRE T +N+ + A D + T + I V D ND +P F S Y +I+E+A IG+ V + A D+D+ N +KY I + + + F S+ G ++ LD E Y LT+ A D+G +ST V +N++DVNDN P F T T +++ + G+ +G A D D G N+ I + + P FS N+ ++ L ++ + +D +LV+ A D+G PK S +T++V ++
Sbjct: 773 SISYAIVSGDPT-NLFLVDSTGGIIKINGDMDREEKA--QYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIV---DIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTS---NAEGLLWI----NSTSGVIKLAR-KLTDGDETQ-YTVQVLASDSGSPPQHSTMT--IHITLSINHPPKFTLSSYVTHVLASQP-LSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIFPGGKLYIRKSL-LQALKGSYDLIVRATDGGVPSF--SASVPVTIYIQDSNDHR-SLFVNNTFRFAVAENSSPGTLVGTLVAHA-LDHSRTKD-------IVYSLISSESHFAVDV-----RSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLA--AMFDVESA---------TGRLIVAKSLDFETTQLYELTITAQDHGLI-PLSSTVNVTVNVLDVNDNAPLFPTQPVT-LTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGS-PKLSTRKSITVQVTDEN 1472 HSP 4 Score: 147.902 bits (372), Expect = 8.314e-36 Identity = 163/621 (26.25%), Postives = 279/621 (44.93%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQ-INCDIM-LRFFISPSYVSKS---LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSME--KVDILCKDQAYNTAS--KSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDSSGKM-YTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQ-SHYLLTVVAIDNGHPNSYTSTTTVKINIIDVN 2311
+D + +T + R+DRE L N N IM + + + + + V + D+NDNAP + + ++ +E L + KA D D +N++ Y L + G+ K +SST EL K +DRE Y L++ A D + + ++ I + D ND P+F + Y N ++E+A IG + + ++A D D NG I Y I + + F++ G ++V K++D++ + ++ ++ A D T V + V+D ND P + P+T + V + + D D G ++ S+ + + V+ + E +A + + + ++ ++ DQ S KSI Q+ D NDNSP F A+ ++ V + A D D N K+ + II GN +F S+G++ Q+ D + +TI A DGG P + +V++ P FS + Y+ S++EN GTSV TV A N ++Y + SD SS F++++ G + T +DRE + + L V A+D P++ TS+ TV I + DVN
Sbjct: 1098 VDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSEL---SLPGSPVFRIKAMDADEGDNAKFFYSLV-----SGTGMDKFFINSSTG---ELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVN-ITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFET-TQLYELTITAQDHGLIPLSST--VNVTVNVLDVNDNAP-----LFPTQPVT---LTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGF-----VSPPAAAAGSSLNVMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQIPDNPTI--YQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSD----------SSKGGFEVVKS-TGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677 HSP 5 Score: 73.9442 bits (180), Expect = 3.284e-13 Identity = 85/336 (25.30%), Postives = 143/336 (42.56%), Query Frame = 2
Query: 446 YRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQV----DVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEP---------AIIENEVISNSVL 1411
Y I +GN L ++ T + V +D E+ ++ I P + ++ V +LD+NDNAP +P Q ++ E N + A D D N+ I + + + K S S E+ I ID E + D ++L+++A D GSPK + + +Q+ D+NDN P F A S N +T++A+D D +NGK+TY I + YFN+ + G + + I + + +Q ++ A DG + R+T + +V V K P+ P ++ EN+V SV+
Sbjct: 1301 YSISNGN-LAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLI-PLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRE---NVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPS--------KTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAAGSSLN------VMTITAEDPDRNSNGKVTYSIISGN-NGYFNLHPSTGQLQMIHQIPDNPTI--YQLTIQASDGG-QPSRQT-----------------QTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVV 1596
BLAST of Protocadherin 1b vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0]) HSP 1 Score: 230.335 bits (586), Expect = 2.414e-61 Identity = 218/753 (28.95%), Postives = 345/753 (45.82%), Query Frame = 2
Query: 338 SITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKS-LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKS--IVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKP 2575
+++ K ++E+ G+ + LT + ++ SY + G+ + +D + V+ K DRE+ Q+ + + SPS ++ + +EILD+NDN P + S E T+ A D D N+ + Y +G T++ D+ T + + +D EQ Y L L D GSP T + L+I + D NDN P+F + Y + ++ EN G VSA D D NG + + I F I G+ G I + K+ DY+ + + +V A D G P +Y +V I + D ND P P I E+ VI ++V+ + D D G R + L + + + + ++ + DRE + + +D + S S + + D NDNSP F + FRV E++S P +G+V A D D N + + + N + F S+G + K LD E+ ++ VT+ AKDGG P ++ +V + V D+ND P+F+ SLY ++ EN G +V VTA D D AN K+ Y I+S + ++ F M R GEI T+ LDRE + Y LT+ A D+G + + TTV I+I D NDN PTF ++ F+I G +G + A D D G N + Y I GN F + ++ L + S L ++ + LV+ A D G P
Sbjct: 169 ALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDT--SYFTVDSQ-GVIRTKGAFDRETKASYQVA--LRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTV---TASDKDNGNNADLRYSFT--SGNTNHA---FTLDAVTG---VVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQS-RVKENTPAG---TQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTR-YDLTVQARDRGVPVKYDT---AQVTIFIEDVNDHSPVF-------SPSNYSKQIPESTVIGSTVVT-VTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSS--ELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYVFRVSESSS-PGHQIGQVAATDADDSSNGDVRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSG----------NENMAFAMDRF-TGEITTRVPLDRETIASYSLTINA-DDGSLVRFMAATTVNISIADENDNQPTFTGPSR--FNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSP 872 HSP 2 Score: 228.409 bits (581), Expect = 9.925e-61 Identity = 199/735 (27.07%), Postives = 348/735 (47.35%), Query Frame = 2
Query: 443 SYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQ--INCD--IMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIK-VIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEII--VHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGR--DIVSCSLSNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQA------YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-IGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSN 2590
SY I GN+ + +D T +T + +DRE++ IN D ++RF + ++N+ I D NDN P++ S+ F E + +R + A D D+ N + Y + N + D R ++ ++ +DRE + Y L++ A D GSP+++ + + + +LD NDN P F+++ ++ ++ E+A++ L V +D D +NG IT + + S+ F I + G ++ + +DY+ +Q +V A DG K+ +V I +I+ ND P + VT I +V N+ + + D D DIV + ++ K+ D+ ++++A DRE + + + + YN A+ ++LD NDN+P F + + L V +V A D+D N+K+ +++ +G+ F ++G + TK+ LDRE+ +++ + A D G P ++ +T+ + D+ND P+FS S Y +++EN G+++ V A D D AN ++ Y IIS F+ S+ G I ++DRE + Y LT+ A D+G P + ST V I + D NDN P F SN+T + I S+G + V A D D G N+++ Y I G+ F+ N N L + ++++ + L I A D+G P S+
Sbjct: 721 SYSILSGNENM-AFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVRFM-----AATTVNISIADENDNQPTFTGPSR---FNISEDSPTGTRVGQL-TATDRDIGPNGAVTYAIISGNQGN-----SFQLDP----RSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKS-LFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGE-GSDNFTIDSTGFVLSKTPLDYET-TAAYQLTVTARDGGSPS--KSATAQVKITIINVNDNVPSFVSPAQVTS----------IPEDVAINTHVVKLNATDSDGTPLTFDIVEGNAGSSFKI--------DQSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNAT----IRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNA--FRIDSTT---------GRITVVGVVDREALASYNLTISAKDSGVP-PWVSTAFVAITVADENDNSPIFA-SNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSA-FAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSD 1395 HSP 3 Score: 199.134 bits (505), Expect = 1.387e-51 Identity = 203/674 (30.12%), Postives = 312/674 (46.29%), Query Frame = 2
Query: 443 SYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKS-LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTD-------NGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPD-FGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQAYNTASKS--IVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLD 2416
+Y I GN N ID T +TV +DRE+L N I + P +VS + + + + D NDN+P + S S+ EG + SR + + A D D N+Q+ Y + G T NGV +K K I+RE V Y L + A D GSP T EL + + D NDN P+F+ ++ Y + EN+ LTV+A D+D AN + Y I + F I +G IM +D++ + + V A D + T + V I VI+ ND P ++ EN S SV+ + D D FG ++DK ++Q S I++ A+ DRE S+ + + D S + +ILD NDNSPKF + + +LEN S P+ F ++ A D D N++I + + N+ F SSG + Q LDRE +++ I A+D G PP+ + + + V+DIND +P + S S+ EN T V + A D D N ++ + ++S+ +S F + + G+I TK LDRE+Q+ Y L + D G+P S +S V I++ID +DN P F+ T +++ +ES+ G I V A D+D
Sbjct: 1239 TYSIISGNHG-NAFRIDSTTGRITVVGVVDREALA--SYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIF--ASNETSYGIDEGVSIGSR-VAVVTATDRDEGSNAQVFYSIV--RGDTSAFAINAMNGVLTVK--------------KEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFN-SQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQ-YGLEVTATDS-----KYTAKTNVTIRVINLNDITPAFTQQ-------NYTASVRENSPTSTSVV-KVSASDRDSFGSLSYSIVGGKDSDKFSIDQRS------GIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILEN-SAPSSFSFKLAATDADEGTNARITYNLSRNDA-FMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNE--HKSVF---------TLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNP-SLSSVADVIIDVIDEDDNCPRFQ---PTEYNVTISESLPRGASIVQVTARDID 1852 HSP 4 Score: 187.578 bits (475), Expect = 5.423e-48 Identity = 194/728 (26.65%), Postives = 320/728 (43.96%), Query Frame = 2
Query: 446 YRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKV-IDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEII----VHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAI-ANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNS--YTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCS 2587
YR+ GN + +ID + + V + +DRE+ + + + S + + + DINDN+P + Q V +E + I A D D + N + Y L D TD V+ I + L+ +K +D E+ Y + + A+D G+P R+ + + + D NDN P F ++ Y + EN G V+A DAD ANGKI+Y I + F + G I R +D + + + ++ A DG+ R V I + DEND +P ++++ P + + + + D D G V+ ++ + ++ Q+ P IL++ + DRE + + D + + SI +LD NDN+P+F + +F + E+ASV + + +V DKD N I + G F IDS+G + +K LD E T + +T+ A+DGG P K+ T V I ++++ND P F SI E+ I T V + A D D T + + I+ + S F+ I G I LDRE ++Y L V A + G Y + T I ++DVNDN P F + S+ +G + V A D D GEN+++ Y++ G+ F N + L ++D + L ++A D GKP + +
Sbjct: 515 YRLISGN-VKGAFNIDANSGSIRVSSELDRETTPSYSLQVEAR-DGGSTSRSSSTRVTIALQDINDNSPIF-QGPYVFRVSE---SSSPGHQIGQVAATDADDSSNGDVRYALSD---NTD--VFSINTSTG------LITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKS-LYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRET-IASYSLTINADDGS--LVRFMAATTVNISIADENDNQPTFTGPSRFNISEDSP-------------TGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDP---RSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVL-QVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSD---GTPLTFDIV--EGNAGSSFK---------IDQSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNAT---IRVLDVNDNAPVFNPGSY-AKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDT-SKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSA 1185 HSP 5 Score: 182.185 bits (461), Expect = 2.166e-46 Identity = 194/719 (26.98%), Postives = 329/719 (45.76%), Query Frame = 2
Query: 500 THVVTVKNRIDRESLCPNQINCDIMLRFFISPS-YVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPI-KVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLD-FGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ--DDHKLVISACDKGKPPKCSNPLWVTIKVVKQH 2626
T V K +D E+ Q+ + R SPS + + + I+++NDN PS+ ++V S E + + + ++ A D D + + + + + N + K D S+ L+ + K +DRE Y L++ A + GS + I++LD NDN P+F+ Y A L EN IG V+A D D N K+TY + S++ G + ++ +D + + V A+D G P + + + + + D ND P+ + LT + EN +++L + DPD G V+ S+ + + ++ + ++ + DRE + + I KD ++ + + D NDNSP F + + + E S+ + V V A D+D N+++ + I+ + F I++ +G + K+ ++RE + +TI A D G P T +T+ V D+ND P F+ Y S+ EN+ TSV TV A D D+ AN ++Y IIS + E F+ +S+ G I+T LD E++S Y L V A D + YT+ T V I +I++ND P F N T S++ + V A D D FG + Y I G FS + ++ + VL ++ + + + D G PP SN WVTIK++ ++
Sbjct: 946 TGFVLSKTPLDYETTAAYQLT--VTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPE--DVAINTHVVKLN-ATDSD---GTPLTFDIVEGNAGS-----SFKIDQSSG----LISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSY-AKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLVTTKRPLDREDQAS-YSLRVTAMDHGKPSQ---SAVAAITLTINDLNDNSPQF---SQSKYTLT----VTENTANGSNIL-RVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGV--VDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSR-VAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISG--NDEKRFKINST---------SGVIMTTTPLDFEEKSQYGLEVTATD----SKYTAKTNVTIRVINLNDITPAFTQQNYTA-SVRENSPTSTSVVKVSASDRDSFG---SLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPP-LSNLTWVTIKILDEN 1611 HSP 6 Score: 158.688 bits (400), Expect = 4.241e-39 Identity = 174/592 (29.39%), Postives = 258/592 (43.58%), Query Frame = 2
Query: 776 YFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTAS--KSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES--VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQ 2530
Y + D N D G++ I DSST + DRE Y L ++A+D + G ++I + D+NDN P F Y N + EN VA+ V+A D D N ITY + + N G I +D++ + + A DG + +I V D ND P + V K + +V S++ + D D G +S SL + D D + I FDRE K+ +V + +D + S ++ +ILD NDN P F+ + V E+ ++ V V A DKD N+ + + GN H F +D+ +G + + LD E+ + + + D G PP T T + I V DIND P FS S Y+ + EN GT V+A DRD N + + II + + + F S G I D E ++ Y LTV A D G P Y T V I I DVND+ P F SN +S Q ES +G + TV A DLD G + Y++ GN G F+ + + + ++S L ++
Sbjct: 1 YSIMDGN---DQGMFTI--DSSTGSITTTG--RKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFN-IRENTPAAQVAI-VTATDRDSGTNAAITYSLFSGENKFMMN-SKTGEIRTVTPLDHETK-DSYTMRISAFDGKHTTFVP------LITVDDVNDNAPFFALSVYKTG--------VYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTV----DSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMV-TVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQ---VSATDRDSSTNGALVFGII--KGNDDGVFTIDGST---------GIISIAKSPDYENKTRYDLTVQARDRGVPVKY-DTAQVTIFIEDVNDHSPVFSPSN---YSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRE 544 HSP 7 Score: 154.066 bits (388), Expect = 1.292e-37 Identity = 135/463 (29.16%), Postives = 216/463 (46.65%), Query Frame = 2
Query: 1220 FQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSL-SNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGT-VEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHK------LVISACDKGKPPK 2581
++ +VLA D A ++ G VVI V DEND PE ++ + N PA + +A + D D G ++ SL S +K + K +I + D E K + I D + T I D NDN+P F V+ V E+ +V ++ V ++ AVD D N+++ + ++ + +F +DS G + TK DRE + V + A+DGG P ++G V IE++D+ND +P FS + Y S+ E+ IG ++ TVTA D+D N ++Y S+ +++ F + G + LD E++S Y L + D G P T T+ + IN+ D+NDN P F S + Q+ GT V A D D N +V+ I +GN G F+ + + ++K D++ L + A D+G P K
Sbjct: 36 YRLTVLAQDAANRCHK--GRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPA---------AQVAIVTATDRDSGTNAAITYSLFSGENKFMMNS-----KTGEIRTVTPLDHETKDSYTMRISAFDGKHTTFVPLITVD--DVNDNAPFFALSVYKTGVYEDVAVGSI-VRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRY----------SFTSGNTNHAFTL-DAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSP-PLTDTSHLLINVNDINDNPPVFSPS-----AYQSRVKENTPAGTQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGII----SIAKSPDYENKTRYDLTVQARDRGVPVK 458
BLAST of Protocadherin 1b vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751]) HSP 1 Score: 207.223 bits (526), Expect = 5.953e-54 Identity = 218/733 (29.74%), Postives = 333/733 (45.43%), Query Frame = 2
Query: 506 VVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNK-LESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKI--KYDSSTSRRIELMPIKV---IDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASE-YFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQA--YNTASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEE-----HFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSK--QDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPP 2650
V+T K +DRE + + ++ F P S ++ V + D+NDN+PS+ + + FE +K + I A D D NS Y + +G N V+K+ K D+ +L+ +DRE++D Y L + A D G+P G L L I + D NDN P F Y+ + EN ++G L VSA D D N +I Y IE + F I ++V N+ D K V+ + ++ + V I V+D ND P ++HV+ L + EN I V A + V D D G V+ +L D + + E I + DRE + +C D+ T KS + D ND +PKF R + RV ENA+V N V V AVD+D NS++ + I E H+F ID SSG + T LDRE+ + +T+L D G PP + V + + D ND P F+ S Y S+ EN+ G+ V + A D D+ N+ + Y I+ + + PF + +G + LD E QS Y V A D G + TV +++ D+NDN P F S+ +V + T +G I ++A+D D + + + IE+GN FS + + + L +L + QD++ L + A D G N V I V+ + +EPP
Sbjct: 13 VITTKTVLDREKVSAYNLT---IVEFSTPPK--SYTVLVYVQDLNDNSPSFVRGTSA-KLVVFENDKDFRQKLI----AVDSDFGSNSTQSYTIV--SGNVGN-VFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVS-YSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVIV-NNVRLDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNP--VIHVSYT--LGGSYQVTENATIGTQV-ARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATV-NTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSIL------------TPNTPF-FLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGG---GRSCNATVHVSLTDLNDNQPVFDPSSYSVEYFENTR-IGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVD-GSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSV-NKAIVNITVLD----VNDEPP 701 HSP 2 Score: 194.897 bits (494), Expect = 3.661e-50 Identity = 188/687 (27.37%), Postives = 307/687 (44.69%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISN-SVLAHI-EVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIAN---------FDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPA-NTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVF-SIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLV--ISACDKGKPPKCSNPLWVTIKV 2614
+N+ +LD+ND P + + +FT E ++ S H+ A D N+++ Y + G TDN V +S+ + ++ +D E++ L + A+D G+P G + I ++D NDN P F+ + +L E+ IG TVS DAD G++++ + + + N G + + K IDY + + V A DG T E + V+D ND P V N S AH+ E PD ++V+ + + + R+ S + + N DRE+ + ++ D S S +++ D NDN+P F + + F V EN V ++G V A D D N + ++ F +GK+ T QVLDRE + +I+A DGG P+ VT+ V D+ND P+FS + Y +++E+ +G+S+ T+ A D D N+ + Y I++ FS + G + LDRE ++L VVA D G S + T ++IN++DVNDN+P F N+T F ++ +G + V AVD D G+N ++ Y+I GN G F N + L + ++ V +SA D GK + ++ VTI V
Sbjct: 689 VNITVLDVNDEPPIFSKAE--YNFTIQEHSQALSVIGHV-HAISRDKGTNAEVVYSIS--KGNTDNIVL---INSTGTLYLQ----SEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILV-RLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLE--LKVVDVNDYSP----------------------VFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVA-TYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFS---------------LNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFI--NETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYV 1320 HSP 3 Score: 176.407 bits (446), Expect = 1.595e-44 Identity = 205/713 (28.75%), Postives = 320/713 (44.88%), Query Frame = 2
Query: 488 IDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELI-IQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQA-------YNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIIS----DRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTE-SVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKP 2575
+D +T +T +DRE+ + + + SP + V + D+ND +P + + S T E + S + + D NS I Y + V K S L + +DRE + L ++A D G + ++ I I +LD NDN P+F + + E IG V V A D+D NGK+ Y+I + F I G I + +D++ + + V A D ++ +KT V I V D ND +P ++P+ I EN I N+ + I+ D D G + ++ + +++ Q DREE S + + DQA YNTA+ I+ Q D NDN+PKF V+E+ N V + A+D D + +E++I+ + F +D +G + LD E+ ++ + I A D G PP T L + VVD+ND PEF+ L+ ++SEN GTSV VTA DRD +N ++ Y I S D+FS I G IVT +LDREK+ Y LTV A +P S+T+V+IN++D NDN P F + V +++ E S I T+ DLD+G N++++Y I GN G F+ +L + L ++ ++L + A D P
Sbjct: 1064 VDKQTGKITTSQVLDREAKA-SYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNK--YSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMI----------VAGPKAFSLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTF-KTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNR-YVLRVSATDMGKKQ-QKTSYQLVTIYVEDANDNRPTF-----DKNPIIT--WIYENVPI-NTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQ--TTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQ--DLNDNAPKFVSRNLTYVMEDEPF-NFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFS---------------IDKHSGLIVTNSILDREKKDTYFLTVHATGVSYP-FRVSSTSVRINVMDRNDNPPKFISP---VVTLKVPENSPARLIYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPP 1728 HSP 4 Score: 175.252 bits (443), Expect = 3.744e-44 Identity = 189/723 (26.14%), Postives = 310/723 (42.88%), Query Frame = 2
Query: 473 LNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSK-SLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDY---------FLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFG--GRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNT--ASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEK-FNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVIS--ACDKGKPPKC 2584
L+ IDP + ++T +DRE + Q+ +++ SP S+ V + D NDN P + Q S S FE + S + + A DPD+ ENS I Y FL R G N + +D E Y + A D G R+ + + + + D NDN P+FD + Y EN IG + A D D + IE A E F++ +G I + K +D + + +V A+DG ++ + V I V+D NDE P + T I+ + SV+ H+ D G + S S N D + L + + + + D E+ + + KD+ ++ ++D NDNSP+F + R+ E+ + + F V D D+ ++ F ++ N F +DS +G + +++D + + + + + A+DGG PP++ T ++ ++VVD+ND+ P F Y + E +++ V A D D N ++ Y D S F + G+I K LDRE Y L V+AID+G P +S+ VK+ + DVNDN P F+ ++ F ++ E V +G V A D D G N + Y+ + F + Q K+ + VL ++ V S A D G P+
Sbjct: 438 LHWFAIDPSSGMITTATDLDREQIP--QVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASL--FENSPSGSPVVQL-LAQDPDIGENSLILYSILTPNTPFFLDPRKGLVTNS-------------------RTLDHEVQSSYTFQVAATDGGG--RSCNATVHVSLTDLNDNQPVFDPSSYSVEYF-ENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQ-DNYLLTVKAVDGGGQD--SVNKAIVNITVLDVNDEPP---IFSKAEYNFT-----IQEHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGT-----LYLQSEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFY-TVSVFDADSGVLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAF--DSKVDTSKFGL----------RNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRR-SSSADVKVIVDDVNDNNPHFQQASYAFF-VKENEPVATYLGAVSASDSDEGSNGHVTYRFD--TQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRV 1100 HSP 5 Score: 169.859 bits (429), Expect = 2.152e-42 Identity = 174/683 (25.48%), Postives = 298/683 (43.63%), Query Frame = 2
Query: 605 SKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKAS----EYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCS-LSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-IGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVL---SKQDDHKLVISACDKGKPPKCSNPLWVTIKVV 2617
S + +E+LD+NDN P + + N + D D +N +++ L+ +G + +K+D I + + +DRE D + L + D G P RT I + D ND P FDR Y ++ ENA + + V+A D D+ +N ++ Y I + S +F I ++G I ++D + + +VL D G+P + C V++ + D ND P N P S S + + +DPD G ++ S L+ N L+ ++ + D E +S + D + + ++ + D NDN P F + EN + + ++ A+D+D+ + + F I GN + F +D SG + ++LDRE + + +T+ A DGG +V I V+D+ND P FS + Y F+I E++ + +G V AI RD N ++ Y I + + ++ +S+ G + + +D EK LTV A D G P + V I +ID+NDN P F +S+ V + T +G+ TV D D G + + + NP F+ ++ L L ++ + + L + A D G PP+ S + + +KVV
Sbjct: 262 SAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEG-----GDGYFSMKFDVLNDESI-IAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDR-HTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQ-IPQVVLTVLVHDRGSPP---LSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSP--------SGSPVVQLLAQDPDIGENSLILYSILTPNTPFFLDP-----RKGLVTNSRTLDHEVQSSYTFQVAATDGGGRSCNATVHVSLTDLNDNQPVFDPSSYSVEYFENTRI-GQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRDKGTNAEVVYSI--SKGNTDNIVLINST----------GTLYLQSEVDHEKIPSLYLTVQAKDKGTPPLF-GYANVTIAVIDINDNSPQFNSSSILVRLPEDTP-IGHTFYTVSVFDADSGVLGRVSFSLLS-NPGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAM-LELKVV 903 HSP 6 Score: 162.155 bits (409), Expect = 3.916e-40 Identity = 173/670 (25.82%), Postives = 291/670 (43.43%), Query Frame = 2
Query: 593 PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVID-REQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSE---NANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKD-GGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKG 2569
P + ++ + ++DINDN+P + S +V E + T + FD D ++ + L G N DS+T L K+ID Y L + A+D GSP R+ + L ++++D ND P+F Y A+ L ++NI + V A D D NG+I+Y + + + F + N G I ++ +D + ++ + V+AID G P R++ +V ++V D ND P + + ENE ++ + L + D D G V+ ++ Q + +I DRE K+ I+ D + + + D ND SPKF++ + V E+ V + + + D NS I + I+ + F +G + LDRE T + + ++A D GG+ + I V+D+ND P F ++ E IG+ V V A+D D N K++Y+I++ + + F+ I G I T LD E + Y+L V A D G TS V I + D NDN PTF N + I + + T++A D D G NS I Y I+ +P +F N++ + + +++ ++ L + A D+
Sbjct: 786 PLFGYANVTIAVIDINDNSPQFNSSSILVRLPE---DTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGTLFN------LDSNTG---ALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNI----IEVVATDVDSGENGRISYAFDSKVDTSKFGLRNGGKIFIKSKLDRE-DIEEYNLKVIAIDHGTP---RRSSSADVKVIVDDVNDNNPHF-------QQASYAFFVKENEPVA-TYLGAVSASDSDEGSNGHVTYRF----DTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFSLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNG--NTDGTFK---------INETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFD-KNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQA 1411 HSP 7 Score: 147.132 bits (370), Expect = 1.926e-35 Identity = 122/385 (31.69%), Postives = 186/385 (48.31%), Query Frame = 2
Query: 1508 PSDKEFQILAIAN---FDREEKSMEKVDILCKDQAYNTASKS--IVFQILDRNDNSPKFTRVFHFR--VLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQI----DSSGKMYTKQVL-------DREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTE--SVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLIL---NSVLSKQDDHKLVISAC-DKGKPPKCS 2587
P+D E+ I DRE+ S + I+ ++T KS ++ + D NDNSP F R + V EN F +++AVD D NS + I+ GN + F++ D+ G +Y V+ DRE + + + I A DGG+P G ++I V D ND KPEFS Y +I EN +GTS+ V+A D+D+ N +++Y I + +S I G IV LD E + YL+ V A D G + +S+ V+I ++DVNDN P S S Q TE ++G ++ V D D G+N E+ +E G+ Y F+ N + I+ S+ + DH + + C DKG PP+ +
Sbjct: 4 PADLEYNAGVITTKTVLDREKVSAYNLTIV----EFSTPPKSYTVLVYVQDLNDNSPSFVRGTSAKLVVFEND---KDFRQKLIAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIET----------HSDPQAIFGIHPTTGVIVNNVRLDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTT 371 HSP 8 Score: 144.821 bits (364), Expect = 8.083e-35 Identity = 154/588 (26.19%), Postives = 253/588 (43.03%), Query Frame = 2
Query: 875 VIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAER--NSKIEFQI--IGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEF-SLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGY----EIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSN 2590
++DRE+ D Y L + A P R S + I ++D+NDN P F + K+ EN+ + T++ +D DY N K+ Y I F IG + G + +D + +Q SV A D P Y T + I + D+ND P + + I + + ++ D D G + +LSN+ S + + + A F+ K + KDQ + A + +I D+N+++P+FT+ + + N S + V V A D D ++ N K+ +++ N F ++S +G + T + + I+A+D G PP G G+V I + +I D P F + + SI EN+ +G+ + TV A ++ ++ Y IIS + Y PF + + + LD E ++ L +VA G S + IN+ID NDN P F SN Q E G + V A D+D G N ++ Y I GN G F+ ++ ++ +L ++ LVI D G PPK +N
Sbjct: 1603 ILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKF-ISPVVTLKVPENSPARLI-YTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRETKAS-YQLSVQAKDITPPYY--TAFANITIFIEDQNDNPPVFQQSLYS--------STISELTPPGTSILNLTASDKDSGSNGNIVYTLSND---TYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSA-SALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPARVSIPENSKVGSYITTVRA---RASSDAQVTYSIISGNKGRAFYVD-----PFTGVI----SVASADALDYESTKNFRLHLVATPQGWV-SLNGYMILDINVIDRNDNSPAFHPSNMLA---QLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTN 2157 HSP 9 Score: 127.872 bits (320), Expect = 1.452e-29 Identity = 160/580 (27.59%), Postives = 252/580 (43.45%), Query Frame = 2
Query: 443 SYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFF---ISPSYVSKSLNVEILDINDNAPSWPQQSKV------------VSFTEFEGNKLESRTIHIDKAFDP------------DVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKD-ADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIAN-FDREEKSMEKVDILCKDQAYNTASK--SIVFQILDRNDNSPKFTRV---FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE-EHFFQIDS-SGKMYTKQVLDREETE--KFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRD 2062
+Y I+ GN+ ID T +T +DRE+ + D+++R I P + + V + D+NDN P + S+V S + +K T ++ A P D N+QI Y N +D +KI D+ + +++ D ++ + A D G P + + + I I + P F+ Y+ K+ ENA +G LTV D A L G+I+Y IE+ S YF IG +G I V K +DY+ + F V AID AP K V I V D NDEKP + A + +++ ++ D D G V ++ + D + D++ ++ D E V + D+ S+ ++LD NDN P F RV +VLEN + N + E+ A D+D+ N+++ F +IG + F ID SG + T D E T ++++TI A D G+PP + + + V D +++ P F+ Y+F + NA IG VG VTA DRD
Sbjct: 2105 TYSIWTGNEA-GVFTIDSTTGEITTAKLLDRETTA----SFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITN--SDQIDYKIDADTGVISARRTIDVRIRDS----FIQIPVQAMDQGVPPQRALVYVRIIITRE----PKFELPSYFG-KVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIEN---SNYFRIGQRSGVISVNKPLDYETK-RRFLLVVSAIDDTAPS---KPVRVPVYINVSDVNDEKPVF--------GQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAI---DRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVF-RVPGPNDVQVLENLPL-NSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRD 2648 HSP 10 Score: 124.405 bits (311), Expect = 1.609e-28 Identity = 160/619 (25.85%), Postives = 258/619 (41.68%), Query Frame = 2
Query: 854 IELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANI---GFVALTVSAKDADYLANGKITYRIEDQKASEYFNI-GNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKE----FQI---LAIANFDREEKSMEK----------VDILCKD-------QAYNTA---SKSIVFQ--ILDRNDNSPKFTRVFHF-RVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD----DHKLVISACDKGKPPKCSN 2590
I + +D E + L L+A G G + L I ++D+NDN P F + A +L+E+ FV + V+A D D NGK+TY I + F I G I K +D + F + D G P K+ C+V ++V D ND P DPL+ I + + +V+ + D D R + ++ + + +VS +D++ QI I N D+ + ++ +D+ +D QA + +++V+ I+ R PKF +F +V ENA + + + + +I + I ++F+I SG + + LD E +F + + A D P K V I V D+ND KP F S Y SE +GT V V+A D+D AN ++ + I S K S+ I G I T+ LD E + ++V A D G P +T +V I ++D+NDN P F+ + + + + A D D G N+ + + + G G F + + L N ++ + L I A D G PP SN
Sbjct: 2017 ISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLA-QLAEDTGAFKPRFV-VKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLDRET-TASFDLVIRGTDSGIPP---KSTNCQVKVVVTDLNDNPPLF-------DPLSE--VNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITR---EPKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNI--ENSNYFRIGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGD-DKGSF----------AIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTD-VSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSN 2603 HSP 11 Score: 122.865 bits (307), Expect = 4.520e-28 Identity = 177/671 (26.38%), Postives = 297/671 (44.26%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKR-----TGSLELIIQILDKNDNGPIF-DRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKF-TRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF-KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEG-NPYGYFSFNTQNKKLILNSVLSK--QDDHKLVISACDKGKPP 2578
+ + + D NDN P++ ++ ++++ +E + + I KA D D NS+I Y + ++ + K +S T PI DRE++ Y L + A D ++ T +L++IIQ D NDN P F R Y + E+ F +++A D D G + YRI ++ G + + ++DY+ V + + A D G+P T ++V+D ND PE RD + EN+ SV+ + D D G ++ S+ + + +++ S I+ + DRE+K + + +Y +S S+ ++DRNDN PKF + V +V EN+ P + + D D N+K+ + I+ GN + F I S+G++ T LDRE + +++ AKD P T +TI + D ND P F SLY +ISE GTS+ +TA D+D +N + Y + S ++Y YS I G + + + + Y +A D G + + V+I I D N++ P F KT + T+ S + T D D N ++ Y++++ N F + + ++ S Q H L I A D G PP
Sbjct: 1316 VTIYVEDANDNRPTF-DKNPIITWI-YENVPINTNVTTI-KAHDDDSGLNSRIWYTIDSQSPRA-----HFKINSETGLIQTTHPI---DREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQ--DLNDNAPKFVSRNLTY---VMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVLKLIGSLDYE-DVPQYTLHISATDLGSPP---LTSYQLFNVVVVDVNDNPPEF-----TRDLFIG--TVSENKPTGTSVV-KVTAYDRDSGSNAELTYSIPSG--VEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPENS--PARLIYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTL-----SNDTYGVYS-------IDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQ-DPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPP 1941 HSP 12 Score: 82.8037 bits (203), Expect = 8.385e-16 Identity = 85/312 (27.24%), Postives = 146/312 (46.79%), Query Frame = 2
Query: 872 KVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIAN--FDREEKSMEKVDILCK-DQAYN---TASKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEF 1780
K +D E + L++ A D+ +P + + + I + D ND P+F ++ Y A + SE +G + + VSA D D ANG++ + I+ F I G I ++ +D++ +K SV A D G+P + + V I V+D ND P R P N+ ++EN + NS L I D D G +S ++ L + +F N FD E ++ + + K A N +++ +I+ + D ++ P F R+ + F V NA + + FVG+V A D+D+ ++ F
Sbjct: 2363 KPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMA-QWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQRALDHET-IKTHHVSVRATDEGSPPMHT---DVSVTIRVLDLNDNPPVF------RVPGPNDVQVLENLPL-NSRLYEINATDRDSGANARLSFTVIGGTGQGLFLI----DKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGD-FVGQVTATDRDSGDQGRVFF 2657
BLAST of Protocadherin 1b vs. Ensembl Nematostella
Match: EDO48237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF4]) HSP 1 Score: 196.438 bits (498), Expect = 1.110e-50 Identity = 206/745 (27.65%), Postives = 331/745 (44.43%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFI--------SPSYVS-KSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEII-VHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQA--YNTASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEH--FFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLDFGENSEIVYQIEE-GNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPP 2650
ID T V+T K +DRE + R F PS L + +LD+NDN P + + E +K + +A D D N ++ Y + + +G DN + I S + +M K +DRE+V Y L + A+D G+P R+ ++ + I +LD ND P F + K Y+ + E+ + + TV A D D +NG++ + I +F+I NG + V++ +DY+ + F V A D G P Y +T V I +ID ND P+ + H P EN + ++ D D G ++ S ND S ++ I DRE+ I +D+ + + I +LD NDN PKF++ +H + EN S V +V A+D D+ + + + I+ + H F+I+ G + L+ + ++ A DG + T LV + V D N PEF Y + E+A +GTSV TV A DRD +N K+ Y I ++ +P + G I T LDREK Y V A D+G P + + V I+I DVNDN P F K + + E + G + V A D D G+N++I+Y G+ G F+ ++ + L ++ +++L + A D+G PP ++ V +KV+ + + + PP
Sbjct: 71 FSIDQITGVITTKRGLDRE----------FLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPE---DKSIGDFVLAVRASDADSGSNGEVKYCILNSDG--DNSAFSI---GEVSGAVTVM--KKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSK-KVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYEM-IGVFNLLVTAQDKGQPFLYNQT---TVDIALIDVNDNAPQFVSSHFQTMIP--------ENYAVGQE-FYRVQAYDKDHGTNGEITFSFMQNDL----PFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAEN-SRWGTSVLQVKAIDPDSG-PTNVVYSIVSSSGHDRCFRINPQGLITLSCTLNYNTKHVYVFSVSASDG---MLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSI-------------ATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQ-LKAKSFVYIHIADVNDNDPVFL---KPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQAS---VKVKVILED--VKDSPP 750 HSP 2 Score: 191.815 bits (486), Expect = 2.776e-49 Identity = 193/645 (29.92%), Postives = 291/645 (45.12%), Query Frame = 2
Query: 737 AFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSS--TSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKA-SEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVD----------ILCKDQA----YNTASKSIVFQILDRNDNSPKFTRVFHFRVL--ENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDR-------GEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLS----KQDDHKLVISACDKGKP 2575
A DPD N I Y + + I + T++R +DRE +D + + AED G P G ++L I +LD NDNGPIF+R YA + E+ +IG L V A DAD +NG++ Y I + + F+IG +G + V K +D + V + V A D G P ++ V I ++D ND P+ V A I +V N ++ + D D G +N ++ E VS +D F +I + E + +K+D + +D+ YN + I ++D NDN+P+F HF+ + EN +V F V A DKD N +I F + N+ F +++G + K+ LDRE+ KF I A+D G P K GT +TI ++DIND P+FS Y SI+EN+ GTSV V AID D T + Y I+S HDR G I L+ + Y+ +V A D +ST V +N+ D N + P FK + + ++ S+G + TV A D D G N++I Y I P F+ ++ + S K D ++ ++A D G P
Sbjct: 44 ASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGVITTKR-------GLDREFLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFER-NIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSGAVTVMKKLDREK-VPTYTLQVQAQDQGNPP---RSATVTVKITLLDVNDCTPQFSKKVYS--------ATIREDVPVNQLVTTVRATDCDQG----------SNGEVFFEIVSGNDMNF--FSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIA--LIDVNDNAPQFVSS-HFQTMIPENYAVGQEFY-RVQAYDKDHGTNGEITFSFMQNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPD-SGPTNVVYSIVSSS------------------GHDRCFRINPQGLITLSCTLNYNTKHVYVFSVSASD----GMLSSTALVYVNVTDSNTHAPEFKRRSYSA-EVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVP----EFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIP 624 HSP 3 Score: 154.836 bits (390), Expect = 6.840e-38 Identity = 170/662 (25.68%), Postives = 291/662 (43.96%), Query Frame = 2
Query: 593 PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVF-QILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESV--GYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSF--NTQNKKLILNSVLSKQDDHKLVISA 2557
P + ++ + +LD+ND P Q SK V + ++ + +A D D N ++ + + N + +I + +++ D E + V+ L++ A+D G P + I ++D NDN P F + ++ + EN +G V A D D+ NG+IT+ N N G I +++ +D + V F F + A D G P K G ++ I ++D ND P+ ++ + T +I EN SVL ++ DPD G ++V +S++ R +++P + I + K + + D +S ++V+ + D N ++P+F R + V E+AS+ V V+A D+D N+KI + I F +++G + T LDRE+ + + + A D G P V I + D+ND P F YE + E+ G V V+A D D+ N ++ Y S+ + ++ I +G I T LDRE Y LTVVA D G P S VK+ + DV D+ P F+ K ++ + E + TV+A D + ++Y I GN F NT + ++ Q +++L + A
Sbjct: 213 PRSATVTVKITLLDVNDCTP---QFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKL--------DYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQF-VSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSIN-ENTGGISIKEELDREK-VPKFTFGIKARDKGVP---FKEGTAQITITLLDINDNPPKF----SQEEYHT---SIAENSRWGTSVL-QVKAIDPDSGPTNVVYSIVSSSGHDRCFRINP---QGLITLSCTLNYNTKHVYVFSVSASDGML--SSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASL-GTSVLTVLATDRDTGSNAKISYSIATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTF----------TIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQAS-VKVKVILEDVKDSPPLFE---KPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMKLDYETQSEYRLTVRA 829 HSP 4 Score: 151.754 bits (382), Expect = 6.788e-37 Identity = 175/665 (26.32%), Postives = 295/665 (44.36%), Query Frame = 2
Query: 599 YVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDY-FLKDR---NGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY-NTASKSIVF-QILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKI--EFQIIGNEEHFFQIDSS-GKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVL---SKQDDHKLVIS 2554
Y ++++ ++D+NDNAP + E N + + +A+D D N +I + F+++ + + G IK + +DRE+V + + A D G P + G+ ++ I +LD NDN P F + +Y+ + ++EN+ G L V A D D + + F I G I + ++Y+ + FSV A DG + V + V D N PE KR + E + E+ + SVL + D D G +S S++ + + S + I + DRE+ + ++ D +KS V+ I D NDN P F + + +V E+ P V EV A D D +N++I F G+ + F IDS+ G + T + LDRE ++ +T++A D G PP + V + + D+ D P F LYE ++ E+ + V TV A +DL T M Y I+ R + F I + G I T LD E QS Y LTV A + + + TTV + + D+NDN P + + + ++Q + + A D D + ++ +++ EGN + + N + +L +N L SK + K+ ++
Sbjct: 320 YNQTTVDIALIDVNDNAPQFVSSHFQTMIPE---NYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSINENTGGISIKEE--------------LDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTS-IAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQGLITLSCTLNYNTK-HVYVFSVSASDGM-----LSSTALVYVNVTDSNTHAPEF-----KRRSYSAE--VKEDASLGTSVLT-VLATDRDTGSNAKISYSIAT----LVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIR-PGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIV--RGNSPQVFD---------INPNTGAIQTLMKLDYETQSEYRLTVRAT----LSPFFTETTVMVYLKDINDNTPVLEAFHMNI-NVQEGKVPPEARYKIPAYDPDVSD--KLTFKVMEGNAKEWVTLNATSGELSVNKKLIQASKPANIKIAVT 929 HSP 5 Score: 151.369 bits (381), Expect = 7.978e-37 Identity = 158/536 (29.48%), Postives = 251/536 (46.83%), Query Frame = 2
Query: 989 DNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRI---EDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNND----KMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYG-YFSFNTQNKKLILNSVLSKQDDHKLVIS 2554
+N P F R + A+ +SE+A +G V TVSA D D +NG I Y + ++ ++ YF+I G I ++ +D + + F F V A DG E G ++ I V+D ND P ++ D I E++ I + VLA + D D G V + N+D + +VS + + + DRE+ + + +DQ +A+ ++ +LD ND +P+F+ +V+ + E+ V N V V A D D N ++ F+I+ GN+ +FF I+ +G++ KQ LD E FN+ + A+D G P V I ++D+ND P+F S ++ I EN +G V A D+D N ++ + S+ Q + LPF I + G I K LDREK + + A D G P T + I ++D+NDN P F SI G + V+A+D D G + +VY I + + F N Q + L+ L+ H V S
Sbjct: 15 NNPPQFSRLQEDAS-VSEDAEVGTVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGVITTKRGLDREFLDRHF-FRVKAEDGG--EPSLEGYMDLTINVLDVNDNGPIFERNIYAAD-------IPEDKSIGDFVLA-VRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSGA-----VTVMKKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPV-NQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITF----------SFMQ--NDLPFS-INENTGGISIKEELDREKVPKFTFGIKARDKGVPFK-EGTAQITITLLDINDNPPKFSQEEYHT-SIAENSRWGTSVLQVKAIDPDSGP-TNVVYSIVSSSGHDRCFRINPQG-LITLSCTLNYNTKHVYVFS 515 HSP 6 Score: 77.0258 bits (188), Expect = 4.612e-14 Identity = 70/220 (31.82%), Postives = 104/220 (47.27%), Query Frame = 2
Query: 1970 PEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRII-SDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQI--EEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWVTIKV 2614
P+FS + S+SE+A +GT V TV+A D D +N ++Y + S +YF I G I TK LDRE + V A D G P S + IN++DVNDN P F+ N I +S+G + V A D D G N E+ Y I +G+ FS + + + L ++ + L + A D+G PP+ + VT+K+
Sbjct: 18 PQFSRLQEDASVSEDAEVGTVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYFS---------IDQITGVITTKRGLDREFLDRHFFRVKAEDGGEP-SLEGYMDLTINVLDVNDNGPIFE-RNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSA-FSIGEVSGAVTVMKKLDREKVPTYTLQVQAQDQGNPPRSAT---VTVKI 222
BLAST of Protocadherin 1b vs. Ensembl Nematostella
Match: EDO35413 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLL0]) HSP 1 Score: 196.052 bits (497), Expect = 1.135e-50 Identity = 189/693 (27.27%), Postives = 315/693 (45.45%), Query Frame = 2
Query: 614 LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSP-SDKEFQILAIA-------NFDREEKSMEKVDILCKDQAY--NTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQI-DSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVD-LDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD----HKLVISACDKGKPPKCSNPLWVTIKVVKQHILIP 2638
+ + + D+NDNAP + VS E N + T+ A DPD +N+++ Y G N K D+S+ R + DRE D Y + + A D+G+P ++ + +++ + D NDN P F A +Y ++E+A +G TVSA DAD N ++TY I + + + G I V + +D + + V A D G P + E+ ++V D ND +P + H+ +E A E+I+ ++ D D G N ++R V+ S+ F I +I N DRE +++L D + ++ + D NDN P FT + + V + V V+A D+D + + + I G E F I +++G + LDRE K+ + + A DGG P + V + V+D ND P F+ + + E+ G GT+V V+A+D D+ +N + Y ++ F+ S+LP I Y LTV A N +P Y + ++I ++D ND+ P F S +F++Q S G IG VEAVD D+G N+ + Y+ GN G F + ++++ S L +DD + + + A D G+ PK S+ V ++V ++++ P
Sbjct: 1 VTITVQDVNDNAPVFTSDEFTVSIAE---NVDDGTTVITVTATDPDAGDNAKVSY--ATYGGSHGN---KFAIDASSGR---IYTTGTFDRETKDDYSINVTASDHGNPSKSSTCVVLVTVADNNDNSPKFP-ALHYVFDIAEDAAVGASIGTVSASDADIGENARLTYSIVSPEKATFSMNPVTGEITVGQRLDREG--ANYSIRVTATDLGTPP---LSASMEITVIVDDYNDHRPVFLSHIGTV--FIDENASPGTEIIT------LQAVDGDSG----------VNAEIRYAFVTGNSNNSFTINSITGRLRTARNLDRETTPRFTLEVLAYDLGVPRKDSVTNVTVVLRDVNDNQPVFTMSEYAAEVSEGVVESNIV-TVVAEDRDIGSDGSVTYCITQGREGGLFVINENTGTIGITAKLDRETKSKYTLRVQATDGGSPALSSEADVIVNVLDQNDHAPVFTPATLTVKVQEDTGSGTTVIKVSAVDGDVGSNADVTYSTGMITLNRAIAFKPFSALPNPNI--------------------YNLTVRA-RNIYPPHYKADAAIQIEVLDTNDHAPVFIKSVYLLFAVQDAGS-GVSIGRVEAVDKFDYGPNALVRYEAISGNGTGRFRVAPETGEVLIASSL--RDDVNKTYYIRVRASDMGQ-PKMSDTAGVYVEVTERNLHPP 632 HSP 2 Score: 162.925 bits (411), Expect = 2.164e-40 Identity = 197/771 (25.55%), Postives = 330/771 (42.80%), Query Frame = 2
Query: 356 IQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLN-VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKS--IVFQILDRNDNSPKFT-RVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDR-DLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTE----SVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVL--SKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHI 2629
+ I E +GT + +T + + SY + G+ N ID + + DRE+ IN + +PS S + V + D NDN+P +P V E + +I A D D+ EN+++ Y + T + T E+ + +DRE + Y + + A D G+P + S+E+ + + D ND+ P+F + + ENA+ G +T+ A D D N +I Y ++ F I + G + +N+D + + F VLA D G P RK V +++ D ND +P + +E A +E + S + + +D D G V+ ++ + L ++ + I A DRE KS + + D S ++ +LD+ND++P FT +V E+ + +V AVD D N+ + + I + + K +N+T+ A++ P + IEV+D ND P F S+Y ++AG G S+G V A+D+ D N ++Y IS + F+ + + GE++ L + Y + V A D G P + T V + + + N + P F +K V+ QT+E +VG + TV A D DFG N EI Y I GN YF N L ++ L Q+++ L +SA D GK PK S + T+++ + +
Sbjct: 22 VSIAENVDDGTTVITVTATDPDAGDNAKVSYATYGGSHG-NKFAIDASSGRIYTTGTFDRETKDDYSIN--VTASDHGNPSKSSTCVVLVTVADNNDNSPKFPALHYVFDIAE---DAAVGASIGTVSASDADIGENARLTYSIVSPEKAT------FSMNPVTG---EITVGQRLDREGAN-YSIRVTATDLGTPPLSASMEITVIVDDYNDHRPVF-LSHIGTVFIDENASPGTEIITLQAVDGDSGVNAEIRYAFVTGNSNNSFTINSITGRLRTARNLDRETTPR-FTLEVLAYDLGVP---RKDSVTNVTVVLRDVNDNQPVFTM---------SEYAAEVSEGVVESNIVTVVAEDRDIGSDGSVTYCITQGREGGLFVINENTGTIGI--TAKLDRETKSKYTLRVQATDGGSPALSSEADVIVNVLDQNDHAPVFTPATLTVKVQEDTGSGTTVI-KVSAVDGDVGSNADVTYST-------GMITLNRAIAFKPFSALPNPNIYNLTVRARNIYPPHYKADAAIQIEVLDTNDHAPVFIKSVYLLFAVQDAGSGVSIGRVEAVDKFDYGPNALVRYEAISGNGTGR----------FR-VAPETGEVLIASSLRDDVNKTYYIRVRASDMGQPK-MSDTAGVYVEVTERNLHPPVF---SKAVY--QTSENEDIAVGSALLTVTATDRDFGRNGEISYDIIAGNSQEYFGIGLTNGSLYVSKPLDYEHQENYSLNVSATDGGKEPKTS---YATVRITLRDV 732 HSP 3 Score: 149.443 bits (376), Expect = 2.552e-36 Identity = 177/670 (26.42%), Postives = 289/670 (43.13%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLR---FFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSEN---ANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDK-DAERNSKIEFQII-GNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGN 2461
++P T +TV R+DRE N I + P S + V + D ND+ P + V E E T+ +A D D N++I Y G ++N +S T R L + +DRE + L ++A D G P++ + + + D NDN P+F ++Y A ++SE +NI +TV A+D D ++G +TY I + F I N G I + +D + K + V A DG + E +V++ V+D+ND P V LT + ++ + S + + + D D G V+ S R P A+ N + ++ +I + A +I ++LD ND++P F + + + + +G V AVDK D N+ + ++ I GN F++ +G++ L + + + + + A D G P + T V +EV + N P FS ++Y+ S +E+ +G+++ TVTA DRD N ++ Y II+ + + YF I G + LD E Q +Y L V A D G TS TV+I + DVNDN P F + T + +V A D D + Y I G+
Sbjct: 167 FSMNPVTGEITVGQRLDREGA-----NYSIRVTATDLGTPPLSASMEITVIVDDYNDHRPVFLSHIGTVFIDENASPGTEIITL---QAVDGDSGVNAEIRYAFV--TGNSNN---SFTINSITGR---LRTARNLDRETTPRFTLEVLAYDLGVPRKDSVTNVTVVLRDVNDNQPVFTMSEYAA-EVSEGVVESNI----VTVVAEDRDIGSDGSVTYCITQGREGGLFVINENTGTIGITAKLDRETKSK-YTLRVQATDGGSPAL--SSEADVIVNVLDQNDHAP-----VFTPATLTVK---VQEDTGSGTTVIKVSAVDGDVGSNADVTYSTGMITLNRAIAFKP------FSALPNPNIYNLTVRARNIY---PPHYKADAAIQIEVLDTNDHAPVFIKSVYLLFAVQDAGSGVSIGRVEAVDKFDYGPNALVRYEAISGNGTGRFRVAPETGEVLIASSLRDDVNKTYYIRVRASDMGQPKMSDTAGVYVEVTERNLHPPVFSKAVYQTSENEDIAVGSALLTVTATDRDFGRNGEISYDIIAG--NSQEYFG---------IGLTNGSLYVSKPLDYEHQENYSLNVSATDGGK-EPKTSYATVRITLRDVNDNNPVFSPIEYRCELAENTTPRSVVVCSVRATDRDERGQQSVRYSILGGS 783 HSP 4 Score: 120.553 bits (301), Expect = 2.386e-27 Identity = 178/769 (23.15%), Postives = 314/769 (40.83%), Query Frame = 2
Query: 395 EVLTKYLKNNIVSV-----------STSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKS-LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDA-DYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVIS-NSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRV-FHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN--EEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGG-------DPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVA---IDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTES--VGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQD--DHKLVISACDKGKPPKCSNPLWV 2602
EV +++NIV+V S +Y I G + I+ T + + ++DRE+ ++ + SP+ S++ + V +LD ND+AP + + V E G+ T+ A D DV N+ + Y G+ + +R I P + ++Y L + A + P + I++LD ND+ P+F ++ Y + ++A G V A D DY N + Y + F + G +++ ++ D K + V A D G P+ G V + V + N P V + ENE I+ S L + D DFG +S + + + ++ + +++ +E V + T+ ++ + D NDN+P F+ + + + EN + ++ V V A D+D + + I+G ++ F + +G++ D E T + I AKD G DPP + V I + +N++ P F S++ +++ENA IG SV V+A D+D + + Y ++ + F S+ + D LD E+ L V+A N S + T+ + + D ND P F K+V+S TE +G+ + V AVD D + I Y I GN F + + + L ++ +++L ++A D G PP N V
Sbjct: 336 EVSEGVVESNIVTVVAEDRDIGSDGSVTYCITQGREG-GLFVINENTGTIGITAKLDRET--KSKYTLRVQATDGGSPALSSEADVIVNVLDQNDHAPVFTPATLTVKVQEDTGS---GTTVIKVSAVDGDVGSNADVTY---------STGMITL------NRAIAFKPFSALPNP--NIYNLTVRARNIYPPHYKADAAIQIEVLDTNDHAPVFIKSVYLLFAV-QDAGSGVSIGRVEAVDKFDYGPNALVRYEAISGNGTGRFRVAPETGEVLIASSLRDDVN-KTYYIRVRASDMGQPKMSDTAG---VYVEVTERNLHPPVFSKAVYQTS---------ENEDIAVGSALLTVTATDRDFGRNGEISYDIIAGNSQEYFGIGLTNGSLYVSKPLDYEHQENYSLNVSATDGGKEPKTSYATVRITLRDVNDNNPVFSPIEYRCELAENTTPRSVVVCSVRATDRDERGQQSVRYSILGGSGKDKFVIDERTGEIRATVEFDFEVTMSSFLMIAAKDEGLSPQRTADPPAS----VHILITGVNEFLPVFVQSVFTATVAENAPIGHSVLRVSATDKDKGPDGVVLYHLLGS--DNQQGFDLDSNTGTLSVSGD---------LDNERAGIVTLRVIAKNLFQNSVTPSSVAHATIVVTVTDANDP-PRFL---KSVYSAHVTEGSRIGHVVTNVTAVD-DDSDIRSIRYGISAGNTGNAFVMDAVTGFVRTAAELDREAIAEYRLTVTATDNGTPPMTGNATLV 1047 HSP 5 Score: 110.923 bits (276), Expect = 1.704e-24 Identity = 135/507 (26.63%), Postives = 216/507 (42.60%), Query Frame = 2
Query: 872 KVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANI-GFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIA-NFDREEKSMEKVDILCKDQAYNT------ASKSIVFQILDRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQI-IGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDL-PANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVF 2353
K +D E + Y L + A D G +T + I + D NDN P+F +Y +L+EN V +V A D D + Y I + F I G I D++ + F +G + V I++ N+ P + V + EN I +SVL + D D G +V L +D +Q D L+++ + D E + + ++ K+ N+ A +IV + D ND P+F + V+ V E + + ++ V V AVD D++ S I + I GN + F +D+ +G + T LDRE ++ +T+ A D G PP TG + + + DIND P + ++EN GT V T+ A D DL P KY I + F+ + S G + T LDREKQ Y +++ D ++ I++ D NDN P K +++ V+
Sbjct: 695 KPLDYEHQENYSLNVSATDGGKEPKTSYATVRITLRDVNDNNPVFSPIEYRC-ELAENTTPRSVVVCSVRATDRDERGQQSVRYSILGGSGKDKFVIDERTGEIRATVEFDFEVTMSSFLMIAAKDEGLSPQRTADPPASVHILITGVNEFLPVFVQSVFT-------ATVAENAPIGHSVL-RVSATDKDKGPDGVVLYHLLGSDN---QQGFDLDSNTGTLSVSGDLDNERAGIVTLRVIAKNLFQNSVTPSSVAHATIVVTVTDAND-PPRFLKSVYSAHVTEGSRIGHV-VTNVTAVDDDSDIRS-IRYGISAGNTGNAFVMDAVTGFVRTAAELDREAIAEYRLTVTATDNGTPPMTGNATLVVTLDDINDNPPHLTPLPCIGRVTENKPQGTQVMTLNAEDPDLNPNRGPFKYSISGSDYGS---FRLNVS---------SGVVSTVKSLDREKQDAYNISIKVTD---ARGLSAVNFCMIHVEDQNDNRP--KATSRDVY 1169
BLAST of Protocadherin 1b vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 256.529 bits (654), Expect = 1.978e-70 Identity = 214/738 (29.00%), Postives = 349/738 (47.29%), Query Frame = 2
Query: 482 LHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFIS-------PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKY-DSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQ--KASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI----IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPS----DKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF-KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRE+L C + + L F +S PS +E+ DINDN P +P +S E N + I A D D N DY L G ++ ++ D + +L+ + +DRE D Y+L + A D G+P+R L + + D NDN P F+ Y A ++SEN+ +G L V A D+D NG+I Y + + I G I V+ +D + + F V+A D P+ K+ + V I V D+ND P + I VT + + N I ++ + +A ++V D D G +V+C ++ + +L S S +++ + D E +V+I+ D +++ S+ Q+ D NDNSP F+ + P + +V A D D+ N+++ + I+G+ + F+ID ++G++ + LDRE E++ + A D G P GT V I+V+D ND P+F LS Y FS+ EN + VG VT +D D N + + D +F ++++ G I++ DREK+S Y + A+D G P +S V IN++D NDN P K SN + + S + VEA DLD G N+++V+ I GNPY F + + ++ L ++++ H+LV+ D+GKPP+ + L
Sbjct: 63 LRVDGKTGDIFTTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPE---NTIMGALFSIPLATDRDSERNGVADYALT--AGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEA-EVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLRIDRTTGIIYVKGPLDREE-INSLSFYVVARDKGPQP--KSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIAN----ISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKF---------------VVQNGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATAL 771 HSP 2 Score: 115.931 bits (289), Expect = 9.386e-26 Identity = 138/509 (27.11%), Postives = 225/509 (44.20%), Query Frame = 2
Query: 479 CLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKS-LNVEILDINDNAPSWPQQS-KVVSFTEFEGNKLESRTIHIDKAF----DPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTS----RRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRI-EDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASK--SIVFQILDRNDNSPKFTRVFH--FRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG-NEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEV 1948
L ID T ++ VK +DRE + N ++ ++ R SK+ + +E+ D NDNAP+ + +V+ +E N E + A D D EN+ + + + ++++ S ++ R+ L +D E+V Y + ++A D+G+P + + L +Q+ D NDN P+F + + EN G L V+A DAD N ++ Y I D F I N G + R +D + + ++F V A D G+P G VVI V+D ND P+ ++ L N P + S + + V D D G V S+ + + Q + IL+ +FDRE++S + D S + +LD NDN P T+ + FR L + P+ V V A D D+ N+ + F I G N F+I SSG++ + + R+ + + D G PP+ T LV I V
Sbjct: 293 LLRIDRTTGIIYVKGPLDREEI--NSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVV------AGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEEN-QPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKER-YEFRVTAADKGSPVH---KGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPL--------SPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQ----NGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYV 776 HSP 3 Score: 54.299 bits (129), Expect = 8.836e-7 Identity = 73/296 (24.66%), Postives = 120/296 (40.54%), Query Frame = 2
Query: 338 SITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSY-VSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGK--TDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYA-NKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAG 1210
S T ++ EE + G I +T ++ + Y I + + IDP T V + +DRE + + SP + + ++ +++LD NDN P + SF+ E N + + D D EN+ + ++ GK NG I SS S DRE+ Y L A D G P R+ + + I +LD+NDN P+ + + +LS A+ V A+D D N + + I + F I ++G I + K + G
Sbjct: 471 SPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKG--SPVHKGTATVVIKVLDCNDNDPKF--MLSGYSFSVLE-NMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQNGTGTIL--SSIS----------FDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHG 749
BLAST of Protocadherin 1b vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 256.914 bits (655), Expect = 1.005e-69 Identity = 214/738 (29.00%), Postives = 349/738 (47.29%), Query Frame = 2
Query: 482 LHIDPETH-VVTVKNRIDRESL--CPNQINCD-IMLRFFIS-------PSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKY-DSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQ--KASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI----IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPS----DKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNE--EHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTF-KTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRE+L C + + L F +S PS +E+ DINDN P +P +S E N + I A D D N DY L G ++ ++ D + +L+ + +DRE D Y+L + A D G+P+R L + + D NDN P F+ Y A ++SEN+ +G L V A D+D NG+I Y + + I G I V+ +D + + F V+A D P+ K+ + V I V D+ND P + I VT + + N I ++ + +A ++V D D G +V+C ++ + +L S S +++ + D E +V+I+ D +++ S+ Q+ D NDNSP F+ + P + +V A D D+ N+++ + I+G+ + F+ID ++G++ + LDRE E++ + A D G P GT V I+V+D ND P+F LS Y FS+ EN + VG VT +D D N + + D +F ++++ G I++ DREK+S Y + A+D G P +S V IN++D NDN P K SN + + S + VEA DLD G N+++V+ I GNPY F + + ++ L ++++ H+LV+ D+GKPP+ + L
Sbjct: 140 LRVDGKTGDIFTTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPE---NTIMGALFSIPLATDRDSERNGVADYALT--AGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEA-EVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLRIDRTTGIIYVKGPLDREE-INSLSFYVVARDKGPQP--KSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIAN----ISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKF---------------VVQNGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATAL 848 HSP 2 Score: 117.087 bits (292), Expect = 5.998e-26 Identity = 138/508 (27.17%), Postives = 225/508 (44.29%), Query Frame = 2
Query: 482 LHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKS-LNVEILDINDNAPSWPQQS-KVVSFTEFEGNKLESRTIHIDKAF----DPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTS----RRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRI-EDQKASEYFNIG-NNGNIMVRKNIDYDAGVKGFQFSVLAID-GAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASK--SIVFQILDRNDNSPKFTRVFH--FRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG-NEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEV 1948
L ID T ++ VK +DRE + N ++ ++ R SK+ + +E+ D NDNAP+ + +V+ +E N E + A D D EN+ + + + ++++ S ++ R+ L +D E+V Y + ++A D+G+P + + L +Q+ D NDN P+F + + EN G L V+A DAD N ++ Y I D F I N G + R +D + + ++F V A D G+P G VVI V+D ND P+ ++ L N P + S + + V D D G V S+ + + Q + IL+ +FDRE++S + D S + +LD NDN P T+ + FR L + P+ V V A D D+ N+ + F I G N F+I SSG++ + + R+ + + D G PP+ T LV I V
Sbjct: 371 LRIDRTTGIIYVKGPLDREEI--NSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVV------AGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEEN-QPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKER-YEFRVTAADKGSPVH---KGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPL--------SPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQ----NGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYV 853 HSP 3 Score: 55.0694 bits (131), Expect = 5.676e-7 Identity = 73/296 (24.66%), Postives = 120/296 (40.54%), Query Frame = 2
Query: 338 SITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSY-VSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGK--TDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYA-NKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIG-NNGNIMVRKNIDYDAG 1210
S T ++ EE + G I +T ++ + Y I + + IDP T V + +DRE + + SP + + ++ +++LD NDN P + SF+ E N + + D D EN+ + ++ GK NG I SS S DRE+ Y L A D G P R+ + + I +LD+NDN P+ + + +LS A+ V A+D D N + + I + F I ++G I + K + G
Sbjct: 548 SPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHK--ERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKF--MLSGYSFSVLE-NMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQNGTGTIL--SSIS----------FDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHG 826
BLAST of Protocadherin 1b vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755]) HSP 1 Score: 248.825 bits (634), Expect = 8.925e-68 Identity = 217/734 (29.56%), Postives = 345/734 (47.00%), Query Frame = 2
Query: 482 LHIDPET-HVVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN---------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRI-ELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQK--ASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPS----DKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP-TFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYF--SFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRE+L C N D L F +S + + K + +E+LDINDN P + +S E N I A D D N +Y L G N ++ ++ +I +++ I +DRE+ D Y+L + D G P R S L I + D+NDN P F++ +Y A +L EN+ G L V A DAD ANG I Y + I + I+ K + +F V+A D P K+ + +V I + D+ND P I + N A I ++ + +A ++V D D G +V+C ++ + +L S S +++ + D E +++I+ D +++ S+ Q+ D NDN+P F+ + P V +V+A D D+ N+++ + II + F+I+S +G++ + LDRE+ E++ + A D G P KTGT +V I V D ND P+F LS Y FS++EN VG VT D D N+++ + D +F +I++ G I++ DREK+S Y + A+D G P +S V IN++D NDN P K +N + ++ + + V+A D+D G N+E+ Y I GNP+G F S N+ KL + H+LV+ DKGKPP+ + L
Sbjct: 80 LRVDSKTGEIYTTEIPIDRETLSDCRNLFEDDKCFLEFEVSITDMVKGIGLGPRLIEGIIEVLDINDNTPQFSSPILTLSIPE---NTHTGTLFSIPVAVDRDSGSNGVAEYALS--AGPDANQLFGLQVAEDVDEKIPQVIVIGNLDREKKDSYDLNIRVVDGGKPPRASSALLRITVTDQNDNAPKFEKNQYEA-ELPENSPPGHSVLQVRANDADTGANGDIDYSLHQASDTVQRLLRIDRSTGIIYVKGLVDREEDNLLKFYVVARDRGPNS--KSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFVEPDNGKF---------------IIQNGTGTILSSISFDREKESTYTFRLKAVDAGDP-PRSSYVGVTINVLDENDNAPYVTKPANSSYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTAL 789
BLAST of Protocadherin 1b vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755]) HSP 1 Score: 249.595 bits (636), Expect = 1.879e-67 Identity = 217/734 (29.56%), Postives = 345/734 (47.00%), Query Frame = 2
Query: 482 LHIDPET-HVVTVKNRIDRESL--CPNQINCD-IMLRFFISPSYVSKSLN---------VEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRI-ELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQK--ASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPS----DKEFQILAIANFDREEKSMEKVDILCKDQAYN--TASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQII-GNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISD--RFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP-TFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYF--SFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPL 2596
L +D +T + T + IDRE+L C N D L F +S + + K + +E+LDINDN P + +S E N I A D D N +Y L G N ++ ++ +I +++ I +DRE+ D Y+L + D G P R S L I + D+NDN P F++ +Y A +L EN+ G L V A DAD ANG I Y + I + I+ K + +F V+A D P K+ + +V I + D+ND P I + N A I ++ + +A ++V D D G +V+C ++ + +L S S +++ + D E +++I+ D +++ S+ Q+ D NDN+P F+ + P V +V+A D D+ N+++ + II + F+I+S +G++ + LDRE+ E++ + A D G P KTGT +V I V D ND P+F LS Y FS++EN VG VT D D N+++ + D +F +I++ G I++ DREK+S Y + A+D G P +S V IN++D NDN P K +N + ++ + + V+A D+D G N+E+ Y I GNP+G F S N+ KL + H+LV+ DKGKPP+ + L
Sbjct: 80 LRVDSKTGEIYTTEIPIDRETLSDCRNLFEDDKCFLEFEVSITDMVKGIGLGPRLIEGIIEVLDINDNTPQFSSPILTLSIPE---NTHTGTLFSIPVAVDRDSGSNGVAEYALS--AGPDANQLFGLQVAEDVDEKIPQVIVIGNLDREKKDSYDLNIRVVDGGKPPRASSALLRITVTDQNDNAPKFEKNQYEA-ELPENSPPGHSVLQVRANDADTGANGDIDYSLHQASDTVQRLLRIDRSTGIIYVKGLVDREEDNLLKFYVVARDRGPNS--KSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFVEPDNGKF---------------IIQNGTGTILSSISFDREKESTYTFRLKAVDAGDP-PRSSYVGVTINVLDENDNAPYVTKPANSSYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTAL 789
BLAST of Protocadherin 1b vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238]) HSP 1 Score: 244.588 bits (623), Expect = 2.553e-66 Identity = 216/719 (30.04%), Postives = 341/719 (47.43%), Query Frame = 2
Query: 506 VVTVKNRIDRESLCPNQ----INCDIMLRFFISPSYVSKSLNVEIL--DINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQ---KASEYFNIGN-NGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEI-----------IVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFP--TFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDD--HKLVISACDKGKP 2575
+ T NRIDRE LCP C + + P+ + + ++I+ D NDNAP +P S V++ + E + SR I A DPD NS Y L NG++ G+ I + +L+ + +DREQ D Y + + ED GSP+++ + L + + D NDN P+F R + EN+ IG + + A DAD N +I Y Q F + + +G I V++ +D + + SVLA DG+ R T V+I V D ND P I V ++++DP+ + A+I + KD D G+ V C + + L+ V D ++ + A D E I+ D + +++ + ++ D NDN P FT+ V V+EN ++F+ + A D+D+ +N++I +Q+ G FF +D +G + +V DRE+ ++F T+ A+D G PP V + V+D ND P+F+ + ++F +SEN ++VG +T D D N + I++D E++ PF G I + DRE+QS Y V AID+G P +S V IN+IDVNDN P + SN + + + G + V AVD D G N+E+ Y I GN G F + + L + D H+LV++ D G P
Sbjct: 85 IFTTSNRIDREKLCPGSSFEDAECSFEIEVVVLPNDYFRLIKIKIIVKDTNDNAPMFP--SPVINISIPENTLINSR-FAIPSATDPDTGPNSVHKYELI--NGQSAFGL-DIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVF-RENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALNSTSGLITVQRPLDREETAI-HKLSVLASDGSSSPARAT----VIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALIT-----------VSDKDTDINGK--VICFIEKDVPFHLKAVY--DNQYLLETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKR-DLFLTTLSATDEDSGKNAEIVYQL-GPNASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSILND---NENFILD----PFS------GVIKSNVSFDREQQSSYTFDVRAIDSGRP-PCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDSDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDIGLHRLVVNISDLGYP 760
BLAST of Protocadherin 1b vs. Planmine SMEST
Match: SMESG000043679.1 (SMESG000043679.1) HSP 1 Score: 2076.21 bits (5378), Expect = 0.000e+0 Identity = 1025/1028 (99.71%), Postives = 1027/1028 (99.90%), Query Frame = 2
Query: 299 MITFAAWILLLISSITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPPNPDTFSDSKTYVFXXXXXXXXXXXXXXXXXCAIVFKNRICTQLNQNGNHVLTDSNTLEITNRKINIPNDIQRNPTMHSLSYVDPVMMSQQRNANNQQQIYVHSRERQISSDYQSIEERSPSYKQSTQFAWDSASLLQVPLNDQTDQIMYGQNRSTCGKEYYYPEHSQYRSPPIAYGFHGNPPTSYVIRNNQAPKDPQFQQDTFPRNAPHKLYSSLLNVQTINSQPEPTYMYKSLRKGKNNASFV 3382
MITFAAWILLLISSITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPK+TGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPPNPDTFSDSKTYVFIISVLVILLLIIIILIICAIVFKNRICTQLNQN NHVLTDSNTLEITNRKINIPNDIQRNPTMHSLSYVDPVMMSQQRNANNQQQIYVHSRERQISSDYQSIEERSPSYKQSTQFAWDSASLLQVPLNDQTDQIMYGQNRSTCGKEYYYPEHSQYRSPPIAYGFHGNPPTSYVIRN+QAPKDPQFQQDTFPRNAPHKLYSSLLNVQTINSQPEPTYMYKSLRKGKNNASFV
Sbjct: 1 MITFAAWILLLISSITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQINCDIMLRFFISPSYVSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKKTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQIDSSGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTSNKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVKQHILIPNEPPNPDTFSDSKTYVFIISVLVILLLIIIILIICAIVFKNRICTQLNQNSNHVLTDSNTLEITNRKINIPNDIQRNPTMHSLSYVDPVMMSQQRNANNQQQIYVHSRERQISSDYQSIEERSPSYKQSTQFAWDSASLLQVPLNDQTDQIMYGQNRSTCGKEYYYPEHSQYRSPPIAYGFHGNPPTSYVIRNSQAPKDPQFQQDTFPRNAPHKLYSSLLNVQTINSQPEPTYMYKSLRKGKNNASFV 1028
BLAST of Protocadherin 1b vs. Planmine SMEST
Match: SMESG000034072.1 (SMESG000034072.1) HSP 1 Score: 394.43 bits (1012), Expect = 1.123e-118 Identity = 266/792 (33.59%), Postives = 410/792 (51.77%), Query Frame = 2
Query: 302 ITFAAWILLLISSITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQIN--CDIMLRFFISPSYVSKS--LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANK-LSENANIGFVALTVSAKDADYLANGKITYRIEDQKAS----EYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH-----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG---NEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTS-NKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVK 2620
I +IL+ S +I EE GT++ ++K+L++ I S I D N C+ I +T + +K RIDRE+LC + + C +R +Y + L EILDINDN P WP + + E E ++I + A+D D+ EN+ I Y+L+ DN + ++ ++ R+ L P +D E + + ++AED G P + +L + + ++D NDN P F + ++ N+ + E ++ + L V+A D D NG+I Y I+ ++F + G + ++K +DYD G K ++F V+A D AP Y + V I V D NDE P+I ++ V+ R T I EN S LAHI+++D D + + CSL N + RL K F + A +FDRE + E V I C+D N SK+I+ + D+NDN PKF F+F V EN S N +G+V A+DKD +N+++ + II + F+IDS +GKMY LDREE + +N+T++A D G+P TGTG + I V DIND P F Y F I E+A + + VG V A DRD+ N ++ Y +SD F S + ++ FQ I+ D GEI+ LDRE + Y + + AI+ +P +++T + I ++D NDN P F N ++ SI T +S+G EI A D D +N+E+ Y I F+ + + L L + +L + CD G P KCS L + + K
Sbjct: 4 IGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPN-FSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPE----STEKQSIKLAIAYDKDIGENAMIKYYLQP--IYHDNLNFNLE---NSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINMYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDTDEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPY-SLHRTNAFEKFQ-IKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTK 783
BLAST of Protocadherin 1b vs. Planmine SMEST
Match: SMESG000034072.1 (SMESG000034072.1) HSP 1 Score: 394.43 bits (1012), Expect = 2.239e-118 Identity = 265/792 (33.46%), Postives = 412/792 (52.02%), Query Frame = 2
Query: 302 ITFAAWILLLISSITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQIN--CDIMLRFFISPSYVSKSLNVE--ILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANK-LSENANIGFVALTVSAKDADYLANGKITYRIEDQKAS----EYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH-----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG---NEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTS-NKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVK 2620
I +IL+ S +I EE GT++ ++K+L++ I S I D N C+ I +T + +K RIDRE+LC + + C +R +Y + +++E ILDINDN P WP + + E E ++I + A+D D+ EN+ I Y+L+ DN + ++ ++ R+ L P +D E + + ++AED G P + +L + + ++D NDN P F + ++ N+ + E ++ + L V+A D D NG+I Y I+ ++F + G + ++K +DYD G K ++F V+A D AP Y + V I V D NDE P+I ++ V+ R T I EN S LAHI+++D D + + CSL N + RL K F + A +FDRE + E V I C+D N SK+I+ + D+NDN PKF F+F V EN S N +G+V A+DKD +N+++ + II + F+IDS +GKMY LDREE + +N+T++A D G+P TGTG + I V DIND P F Y F I E+A + + VG V A DRD+ N ++ Y +SD F S + ++ FQ I+ D GEI+ LDRE + Y + + AI+ +P +++T + I ++D NDN P F N ++ SI T +S+G EI A D D +N+E+ Y I F+ + + L L + +L + CD G P KCS L + + K
Sbjct: 43 IGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPN-FSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPE----STEKQSIKLAIAYDKDIGENAMIKYYLQPI--YHDNLNFNLE---NSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINMYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDTDEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPY-SLHRTNAFEKFQ-IKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTK 822
BLAST of Protocadherin 1b vs. Planmine SMEST
Match: SMESG000034072.1 (SMESG000034072.1) HSP 1 Score: 392.119 bits (1006), Expect = 4.744e-118 Identity = 262/773 (33.89%), Postives = 404/773 (52.26%), Query Frame = 2
Query: 359 QIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQIN--CDIMLRFFISPSYVSKS--LNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANK-LSENANIGFVALTVSAKDADYLANGKITYRIEDQKAS----EYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH-----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG---NEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTS-NKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVK 2620
+I EE GT++ ++K+L++ I S I D N C+ I +T + +K RIDRE+LC + + C +R +Y + L EILDINDN P WP + + E E ++I + A+D D+ EN+ I Y+L+ DN + ++ ++ R+ L P +D E + + ++AED G P + +L + + ++D NDN P F + ++ N+ + E ++ + L V+A D D NG+I Y I+ ++F + G + ++K +DYD G K ++F V+A D AP Y + V I V D NDE P+I ++ V+ R T I EN S LAHI+++D D + + CSL N + RL K F + A +FDRE + E V I C+D N SK+I+ + D+NDN PKF F+F V EN S N +G+V A+DKD +N+++ + II + F+IDS +GKMY LDREE + +N+T++A D G+P TGTG + I V DIND P F Y F I E+A + + VG V A DRD+ N ++ Y +SD F S + ++ FQ I+ D GEI+ LDRE + Y + + AI+ +P +++T + I ++D NDN P F N ++ SI T +S+G EI A D D +N+E+ Y I F+ + + L L + +L + CD G P KCS L + + K
Sbjct: 6 RITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPN-FSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPE----STEKQSIKLAIAYDKDIGENAMIKYYLQP--IYHDNLNFNLE---NSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINMYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDTDEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPY-SLHRTNAFEKFQ-IKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTK 766
BLAST of Protocadherin 1b vs. Planmine SMEST
Match: SMESG000027424.1 (SMESG000027424.1) HSP 1 Score: 311.997 bits (798), Expect = 2.155e-89 Identity = 242/738 (32.79%), Postives = 372/738 (50.41%), Query Frame = 2
Query: 464 NKLLNCLHIDPETHVVTVKNRIDRESLCP-----------NQINCDIMLRFFI---SPSY-VSKSLNVEILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKRTGSLELIIQILDKNDNGPIFDRAKYYANKLSENANIGFVALTVSAKDADYLANGKITYRIED---QKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFH-FRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGNEEHFFQID-SSGKMYTKQVLDREETEKFNVTILAKDG-GDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRD-LPANTKMKYRIISDRFSKESYFQYSS-SLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAID-NGHP---NSYTSTTTVKINIIDVNDNFPTFKTSN--KTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSK-----QDDHKLVISACDKGKP 2575
++ + C I+ +V V RIDR+ +C ++I + + FI SPS + + + I DINDN PSW Q V F +G K E + + AFD D+ +N+QI+Y K+R+ + + T L ++ +DREQ + Y LIA D G+P +TG +E+ + I D NDN PIF + Y +SE++ +G + + A DAD NGK ++ + + YF I ++G ++V +D D G +F V+ D A Y K+ + V + + D NDEKPE+ + D TN+P ++E+ I +++ +EV D D+ +D VSC++ N+ + + P +++I +FDRE+ + + I C+D N AS + I D NDN P FT+ F+ ++ EN V M +++A D D+E S I++ I F ID +G + T DRE + + ++AKD +P TGT V + ++D ND KP F+ Y F I EN T+VG V A D D + + + YR+ +YSS + PF+ I G I LDREK++ Y V D N +P N+ TS+ TV I+ DVNDN P F N K+ F I ++VG++I V A D D +NS I Y I GN FS ++ L+L+ L Q + L ++ACD GKP
Sbjct: 51 DRFVKCFKINMNGQLV-VARRIDRDQMCEKSTSQPIYTKNSRITPEEECKIFINVASPSLNIMTKVVITIEDINDNIPSWNLQRIEVKF--IDGCK-ERTKVSLPPAFDKDIGQNAQIEYSFKERD---------LPFRLDTEDGFYLQTLQTLDREQKESYTFTLIASDKGNPVQTGEIEVHVVIEDLNDNSPIFSKPIYRFKAVSEDSAVGTIIGKLEASDADSGVNGKFNFKFAEAVPEIVKHYFQIQSDGTVIVAAPLDSDRGNNELKFKVVVEDEALRPYSKSSDATVYVYINDVNDEKPELKLIFMNHDSRTNKPFVVEHTKIG-TLIGILEVTDRDYNNKDTVSCNVDNSQFALISEDRPV--KYKITTNMDFDREKMTTADLRIFCRDSVGNLASSNHSINIKDINDNPPNFTKSFYVMKIKENQPVHTMLPSKLVATDPDSE--STIQYFISPEYSSNFSIDRETGIISTLVSFDREICASYTIKVIAKDSIKEPINTGTCTVQVIILDENDNKPVFTHEFYTFHIPENNFPNTAVGIVKATDLDEQDSQSSLSYRL-----------EYSSKTRPFK-INSRSGAITAIITLDREKETFYSFIVYVEDGNDYPMKRNTVTSSVTVVID--DVNDNSPKFIIPNATKSSFDISIKDTVGHKIINVYAEDADVSDNSRIYYNITAGNDENIFSIDSATGLLLLSDSLQSNQQKPQPHYTLSVTACDYGKP 756 HSP 2 Score: 82.8037 bits (203), Expect = 1.128e-15 Identity = 79/269 (29.37%), Postives = 132/269 (49.07%), Query Frame = 2
Query: 1514 DKEFQILA-IANFDREEKSMEKVDILCKD---QAYNTASKSIVFQILDRNDNSPKFTRVFH-FRVLENASVPNMFVGEVMAVDKDAE-RNSKIEFQI-IGNEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPP---KTGTGLVTIEVVDINDWKPEF---SLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTST 2278
D+E I++ + +FDRE + + ++ KD + NT + ++ ILD NDN P FT F+ F + EN + PN VG V A D D + S + +++ ++ F+I+S SG + LDRE+ ++ + +DG D P T T VT+ + D+ND P+F + + F IS +G + V A D D+ N+++ Y I + + E+ F S+ + + ++ Q HY L+V A D G P +T
Sbjct: 503 DRETGIISTLVSFDREICASYTIKVIAKDSIKEPINTGTCTVQVIILDENDNKPVFTHEFYTFHIPEN-NFPNTAVGIVKATDLDEQDSQSSLSYRLEYSSKTRPFKINSRSGAITAIITLDREKETFYSFIVYVEDGNDYPMKRNTVTSSVTVVIDDVNDNSPKFIIPNATKSSFDISIKDTVGHKIINVYAEDADVSDNSRIYYNITAG--NDENIFSIDSATGLLL------LSDSLQSNQQKPQPHYTLSVTACDYGKPKQLCTT 762 HSP 3 Score: 77.411 bits (189), Expect = 5.716e-14 Identity = 109/457 (23.85%), Postives = 181/457 (39.61%), Query Frame = 2
Query: 1100 ANGKITYRIEDQKASEYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGA---PEEYRKTGECEVVIMVIDENDEKPEIIVHVTKRDPLTNEPAIIE--NEVISNSVLAHIEVK-----------------DPDFGGRDIVSCSLSNND-KMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQIL--DRNDNSPKFTR-VFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIGN----EEHFFQIDSSGKMYTKQVLDREETE---KFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFS-------ISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRG---EIVTKYLLDREKQSHYLLTVVAIDN-GHPNSYTSTTTVKINIIDVNDNFPTFKTS 2338
+ GK+ + + + + F I NG ++V + ID D + + + PEE EC++ I V P + + +T IE N+ I + L IEVK D D G + S D RL+ ++ F + + DRE+K ++ D+ + I ++ D NDNSP F++ ++ F+ + S +G++ A D D+ N K F+ +H+FQI S G + LD + KF V + + K+ V + + D+ND KPE L + E+ IGT +G + DRD + + + +F+ +I DR +I T DREK + L + D+ G+ +++ INI D+NDN P F S
Sbjct: 40 SKGKLEIKNLNDRFVKCFKINMNGQLVVARRIDRDQMCEKSTSQPIYTKNSRITPEE-----ECKIFINV-----ASPSLNI-------MTKVVITIEDINDNIPSWNLQRIEVKFIDGCKERTKVSLPPAFDKDIGQNAQIEYSFKERDLPFRLD----TEDGFYLQTLQTLDREQKESYTFTLIASDKGNPVQTGEIEVHVVIEDLNDNSPIFSKPIYRFKAVSEDSAVGTIIGKLEASDADSGVNGKFNFKFAEAVPEIVKHYFQIQSDGTVIVAAPLDSDRGNNELKFKVVVEDEALRPYSKSSDATVYVYINDVNDEKPELKLIFMNHDSRTNKPFVVEHTKIGTLIGILEVTDRDYNNKDTVSCNVDNSQFA--------------LISEDRPVKYKITTNMDFDREKMTTADLRIFCRDSVGN----LASSNHSINIKDINDNPPNFTKS 457 The following BLAST results are available for this feature:
BLAST of Protocadherin 1b vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protocadherin 1b vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Protocadherin 1b vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protocadherin 1b vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Protocadherin 1b vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Protocadherin 1b vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Protocadherin 1b vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protocadherin 1b vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protocadherin 1b vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Protocadherin 1b vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Protocadherin 1b vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protocadherin 1b vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Protocadherin 1b vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Protocadherin 1b vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000690 ID=SMED30000690|Name=Protocadherin 1b|organism=Schmidtea mediterranea sexual|type=transcript|length=3515bpback to top protein sequence of SMED30000690-orf-1 >SMED30000690-orf-1 ID=SMED30000690-orf-1|Name=SMED30000690-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1029bp MITFAAWILLLISSITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|
