Cell wall integrity and stress response component 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30000647 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 10
Homology
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Match: A0A5P8I4L8 (Uncharacterized protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0 Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 1 Query: 79 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSLIIKHIYDKYF 846 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNE YPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSLIIKHIYDKYF Sbjct: 1 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNEPYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSLIIKHIYDKYF 256
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Match: A0A183LY04 (Uncharacterized protein OS=Schistosoma margrebowiei OX=48269 PE=4 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 7.819e-58 Identity = 100/231 (43.29%), Postives = 153/231 (66.23%), Query Frame = 1 Query: 94 NEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEIL-NHHKDHVKLWISVFDSGK----MNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKT---SFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLK 762 NE+L+IGAGQMRTGT SLKFAL+ L+N+PCYHM +++ + + H+K WI +F+ + + + IF++ VD+P+ YKDLM IYPNAKV+LT R++D W+ S ++TT + + T +F I++ P++ D+MY KA+ +D + TDDE LK + ++N+EV YVPK+RLL F+ +GW+PLC FLN+P+P E+ PF + K + ++R +LK Sbjct: 50 NELLIIGAGQMRTGTTSLKFALQLLFNQPCYHMYDVIYKYQESHIKKWIKIFNMHQKCVNIEKAIWNDIFNECKFAVDYPTCVFYKDLMNIYPNAKVILTIRDTDSWISSCRATTASDMVMTKHITFTENIIYRLRGLRSLPILHDRMYTKAFGSNYDQM-TDDE-LKNAFIKWNQEVINYVPKDRLLIFDPNDGWKPLCEFLNIPIP-ENVPFPHLNK--RIDLRNRLLK 275
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Match: A0A3P7ZFD7 (Uncharacterized protein OS=Schistosoma margrebowiei OX=48269 GN=SMRZ_LOCUS8679 PE=4 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 8.523e-58 Identity = 100/231 (43.29%), Postives = 153/231 (66.23%), Query Frame = 1 Query: 94 NEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEIL-NHHKDHVKLWISVFDSGK----MNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKT---SFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLK 762 NE+L+IGAGQMRTGT SLKFAL+ L+N+PCYHM +++ + + H+K WI +F+ + + + IF++ VD+P+ YKDLM IYPNAKV+LT R++D W+ S ++TT + + T +F I++ P++ D+MY KA+ +D + TDDE LK + ++N+EV YVPK+RLL F+ +GW+PLC FLN+P+P E+ PF + K + ++R +LK Sbjct: 50 NELLIIGAGQMRTGTTSLKFALQLLFNQPCYHMYDVIYKYQESHIKKWIKIFNMHQKCVNIEKAIWNDIFNECKFAVDYPTCVFYKDLMNIYPNAKVILTIRDTDSWISSCRATTASDMVMTKHITFTENIIYRLRGLRSLPILHDRMYTKAFGSNYDQM-TDDE-LKNAFIKWNQEVINYVPKDRLLIFDPNDGWKPLCEFLNIPIP-ENVPFPHLNK--RIDLRNRLLK 275
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Match: A0A183JZJ8 (Uncharacterized protein OS=Schistosoma curassoni OX=6186 GN=SCUD_LOCUS8156 PE=4 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.013e-56 Identity = 95/226 (42.04%), Postives = 151/226 (66.81%), Query Frame = 1 Query: 94 NEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEIL-NHHKDHVKLWISVFDSGK----MNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKT---SFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVP-NESYPFVNTTKDFQRNV 744 NE+L+IGAGQMRTGT SLKFAL+ L+N+PCYHM +++ + + H+K WI++F+ + +++ IF++ +D+P+ YK+LM IYPNAKV+LT R++D W+ S ++TT + + T +F I++ P++ DKMY KA+ +D + TDDE LK + ++N+E+ YVPK+RLL F+ +GW+PLC FLN+P+P N +P +N D + ++ Sbjct: 98 NELLIIGAGQMRTGTTSLKFALQLLFNQPCYHMYDVIYKYQESHIKKWINIFNMHQKCVNIDKANWNDIFNECKFAMDYPTCVFYKELMNIYPNAKVILTIRDADSWISSCRATTASDMVMTKHITFTENIIYRLRGLKSLPILHDKMYTKAFGSNYDQM-TDDE-LKNAFIKWNQEIINYVPKDRLLIFDPNDGWKPLCEFLNIPIPENVPFPHLNKRIDLRNSL 321
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Match: A0A267EKC2 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig019766g3 PE=4 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.513e-56 Identity = 95/256 (37.11%), Postives = 155/256 (60.55%), Query Frame = 1 Query: 46 RFSFCLNSFFTMNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHH--KDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRN-NMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIG 804 + FC M + + ++VIGAG RTGT S K ALE L +PCYHM E L H + H+ +WI +SG +++ A +I +YSA VD+P+A+ YK+LM+ YPNAKV+L+ R+++ WV+S++S+ L+ + F + + +G + M+D ++ + + + ++ D E + + +EE N+ +R+ VP ERLLEF +GW PLC+FLNLPVP++ +P +N K +R + M + + L + IG Sbjct: 1 QIQFCTKYQTKMPQKTHSLVVIGAGAPRTGTVSQKVALELLLGQPCYHMGEALGLHNSRRHIPMWIQAVESG-LSKSLADEILGNYSACVDYPTASFYKELMQHYPNAKVILSVRDTNSWVESMQSSILKAMHTMERFPRPLKWLLGIG-QADKMIDAVFRREFGDNYNL--ADSEFMARQFEERNDSIRRVVPSERLLEFRVSDGWAPLCQFLNLPVPDKPFPRLNDRKQVERALNIMTAITYVSDALATASCIG 252
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Match: EDO41210 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S4T7]) HSP 1 Score: 94.7449 bits (234), Expect = 8.920e-23 Identity = 75/238 (31.51%), Postives = 119/238 (50.00%), Query Frame = 1 Query: 106 VIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTR-NSDDWVKSVKSTTLRNN--MKTSFVHKILFYFNL---GTEFPVMLDKMYLKAYKE--PFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSL 795 VI AG +TGT SL AL ++ Y E H H++ WI F++ KM + +++ D A D P Y++L +P AKV+L+ R N+D W +S+ L N +K + +++ F L G + M+ M A+K P A+ L K+ Y E NE V+ +PK++LL F ++GW PLCRFL + P +P+ N + +V+ + S I + + L Sbjct: 25 VICAGMPKTGTKSLAKAL-RILGLKVYDADE---HCIYHMEEWIQAFETSKMPD--LYRMYKDVDAVTDVPPMFWYEELHYAFPEAKVILSVRDNTDVWYESL----LWNQKVLKEAMSLRVMLGFLLTPTGWKMSRMMSDMMNAAFKSTNPNAAI-----LNKKAYREHNERVKNVIPKDKLLVFKVEQGWPPLCRFLEIAEPEIFFPYENVNSE---DVKAFLHDSKIATKIYREL 244
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Match: EDO48575 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RIV5]) HSP 1 Score: 87.4261 bits (215), Expect = 2.450e-20 Identity = 68/249 (27.31%), Postives = 119/249 (47.79%), Query Frame = 1 Query: 106 VIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDD-WVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELL---KQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNT-TKDFQRNVRGM-----MLKSVIRSGLVLSLTIGCLSLII 822 +IGAG +TGT SL AL L Y++ + + H +I+ F+ N + +++++ AT D P+ YK++ +P AKV+L+ R+ ++ W +S+ T NN +SF P ++ M L + L + ++ + Y + N++V +P ++LL FN K+GWEPLC FL VP YP N + D R ++ + M + + V + +GC ++ Sbjct: 3 IIGAGLSKTGTKSLASALRHL----GYNVHDHQEQAQFHCDEYIAAFEGQMPNFE---EMYANVDATTDAPACFFYKEIFRAFPYAKVILSVRDDEESWRRSLMKT---NNFTSSFFKN-----------PFIILGMILTPSGRKYSRLGHNLKMYLNNELDYTKHNDDVLANIPAKQLLVFNPKDGWEPLCAFLGAEVPAIPYPRENVNSSDMPRIIKNIWHVRRMKRELAVMMAVFVVLLGCTCALL 230
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Match: EDO48573 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RIV3]) HSP 1 Score: 86.2705 bits (212), Expect = 6.331e-20 Identity = 67/215 (31.16%), Postives = 104/215 (48.37%), Query Frame = 1 Query: 106 VIGAGQMRTGTFSLKFALEKL----YNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTR-NSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQC-----YEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNT 720 +IGAG +TGT SL AL L ++RP E + H D +I+ F+ N + +++ + AT D P+ YKD+ +P+AKV+L+ R N + W +S T + +S ++ P+++ M L F R + L+K Y++ N+ V + ++LL FN K+GWEPLC FL VP YP VN Sbjct: 3 IIGAGLPKTGTKSLASALRHLGYNVHDRP-----EQVQFHCDE---YIAAFEGQMPNFE---EMYENVDATTDVPACLFYKDIFRAFPDAKVILSVRDNEESWRRSFLKTL---EVLSSMINN-----------PLIILGMLLTPSGRKFSRFRHN--LIKYVENELDYKKHNDAVMANIQAKQLLVFNPKDGWEPLCAFLGAEVPTIPYPRVNV 190
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Match: EDO38503 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCW7]) HSP 1 Score: 85.8853 bits (211), Expect = 7.209e-20 Identity = 69/233 (29.61%), Postives = 110/233 (47.21%), Query Frame = 1 Query: 109 IGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTR-NSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQC-YEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTI 801 I AG +TGT SL AL L Y + +I + + H+ WI F G + TA +++ +D P +D++ P KV+LT R N+++W+ TS + ++++ + + L ++ ++ +R LK Y EEV+ VP +RLL FN KEGWEPLC FL P+ +P N +F + M+ KS I + + + LTI Sbjct: 4 ICAGLSKTGTKSLVAALRYL----GYTVYDIEENWRYHMDEWIKAFQ-GTNPDFTA--MYASVDTAIDLPPYLFVRDILVALPELKVILTVRENAEEWL-------------TSLTRSLDIWWSVYNQRWLKLARVLTPTGRKWATLIRHQTAALKTLDYTRHIEEVKAIVPADRLLVFNVKEGWEPLCAFLGHEAPSIPFPHRNKKSEF---IPDMINKSSIVARMRMELTI 213
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Match: EDO38865 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBL0]) HSP 1 Score: 88.1965 bits (217), Expect = 1.050e-19 Identity = 66/229 (28.82%), Postives = 120/229 (52.40%), Query Frame = 1 Query: 94 NEIL-VIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSG-KMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTR-NSDDWVKSV-KSTTLRNNMKTSFVHKILFYFN-LGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLKS 765 NE++ VIGAG +TGT SL AL H+ ++ ++H + + +++ + N K++ D AT D P+ YK++ E +P++KV+L+ R N + W KS+ K+ + +++ S V K+ + G E+ ++ ++ + E D Y + N++V +P +LL FN +EGW PLC FL + VP+ +P +N + ++V ++L S Sbjct: 189 NEVMKVIGAGLPKTGTKSLAAALR--------HLGCTVHDVEEHWRYYSDKYNAAFEGNIPDFKKMYKDVDATTDSPACFFYKEIFEAFPDSKVILSVRENEETWQKSLLKTKEVIDSVLDSPVIKLCQHVTPTGREWSRLVQRVGIHLQNE------VD-------YRKHNDDVIASIPTNQLLVFNPREGWVPLCAFLEVEVPDIPFPQINVS---SKDVSTILLNS 393 HSP 2 Score: 79.7221 bits (195), Expect = 8.504e-17 Identity = 58/207 (28.02%), Postives = 101/207 (48.79%), Query Frame = 1 Query: 106 VIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSG-KMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTR-NSDDWVKS-VKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVN 717 VIGAG +TGT SL AL H+ ++ ++H + + +++ + N K++ D AT D P+ YK++ +P++KV+L+ R N + W KS +K+ + ++ S V K+ + + L + + D Y + N++V +P +LL FN +EGW PLC FL + VP+ +P +N Sbjct: 3 VIGAGLPKTGTKSLAAALR--------HLGCTVHDVEEHWRFYCDEYNAAFEGNIPDFKKMYKDVDATTDSPACYFYKEIFNAFPDSKVILSVRENEETWKKSLIKTDEIMWSVLESPVVKLGQHVTPTGRKCIRLVQRVGIHLQNEVD------------YRKHNDDVIASIPANQLLVFNPREGWGPLCAFLEVKVPDIPFPQIN 189
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Match: SMESG000035037.1 (SMESG000035037.1) HSP 1 Score: 522.316 bits (1344), Expect = 0.000e+0 Identity = 251/256 (98.05%), Postives = 253/256 (98.83%), Query Frame = 1 Query: 79 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSLIIKHIYDKYF 846 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYN PCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKM+LKAYKEPFDALRTDDELLKQCYE+FNEEVRKYVPKERLLEFNAKEGWEPLCRFLNL VPNE YPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSLIIKHIYDKYF Sbjct: 1 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNCPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMFLKAYKEPFDALRTDDELLKQCYEDFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLQVPNEPYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSLIIKHIYDKYF 256
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Match: SMESG000035036.1 (SMESG000035036.1) HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0 Identity = 247/256 (96.48%), Postives = 252/256 (98.44%), Query Frame = 1 Query: 79 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSLIIKHIYDKYF 846 MNHRKNE+LVIGAGQMRTGTFSLKFALEKLYN PCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYE+FNEEVRKYVP+ERLLEFNAKEGWEPLCRFLNLPVPNE YPFVNTTKDFQ +RGMMLKSVIRSGLVLSLTIGCLS+IIKHIYDKYF Sbjct: 1 MNHRKNELLVIGAGQMRTGTFSLKFALEKLYNCPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEDFNEEVRKYVPRERLLEFNAKEGWEPLCRFLNLPVPNEPYPFVNTTKDFQLTIRGMMLKSVIRSGLVLSLTIGCLSIIIKHIYDKYF 256
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Match: SMESG000035096.1 (SMESG000035096.1) HSP 1 Score: 490.73 bits (1262), Expect = 2.514e-177 Identity = 230/256 (89.84%), Postives = 245/256 (95.70%), Query Frame = 1 Query: 79 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSLIIKHIYDKYF 846 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSV+STTL++ M+TS K L +F++GTEFPVM DKM+LKAYK+PFDA+R DDELLKQCYE+FNEEVR YVPKERLLEFNAKEGWEPLCRFLNLPVPNE YPFVNTT+DFQRNVRG+MLKS+IRSGL +SLTIGCLSLIIKHIYDKYF Sbjct: 1 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVRSTTLKDEMRTSLFDKFLLFFSIGTEFPVMCDKMFLKAYKKPFDAVRADDELLKQCYEDFNEEVRIYVPKERLLEFNAKEGWEPLCRFLNLPVPNEPYPFVNTTQDFQRNVRGIMLKSLIRSGLAISLTIGCLSLIIKHIYDKYF 256
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Match: SMESG000035040.1 (SMESG000035040.1) HSP 1 Score: 311.612 bits (797), Expect = 1.094e-106 Identity = 143/249 (57.43%), Postives = 188/249 (75.50%), Query Frame = 1 Query: 79 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSLIIK 825 M + +E+ VIGAGQMRTGT SLK ALEKLYN CYHMAEI +H++H+ LWISVFD +++ TA + SDY ATVDFPS AVYKDLM++YPNAKV+LTTRNSDDW+KSV++TTL+ +F+ KI F F+ FP +K+ AYK ++ L DD +LKQCYE+FN+EVR+ VPKERLLEFN+K+GWEPLC FLNLP+P+E YPFVN+T++F + + L ++ G+ +++ G +SLIIK Sbjct: 1 MRKKNHELSVIGAGQMRTGTKSLKMALEKLYNGKCYHMAEIFENHRNHISLWISVFDKNGLDKSTAESLLSDYCATVDFPSTAVYKDLMKLYPNAKVILTTRNSDDWLKSVRNTTLKKGSDVTFLSKIFFMFSGLGRFPEFSEKLINHAYKNSYETLINDDAILKQCYEDFNQEVRETVPKERLLEFNSKQGWEPLCTFLNLPIPDEPYPFVNSTEEFNKYINKTYLADFVKYGIFVTIFAGAISLIIK 249
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Match: SMESG000035067.1 (SMESG000035067.1) HSP 1 Score: 249.98 bits (637), Expect = 2.022e-82 Identity = 121/247 (48.99%), Postives = 170/247 (68.83%), Query Frame = 1 Query: 79 MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNESYPFVNTTKDFQRNVRGMMLKSVIRSG-LVLSLTIGCLSL 816 M N++ VIGAGQMRTGT SLK ALEKLY YHM EIL + DH+ LWI D G + ++ + +IF+ Y A VD P+A Y+DL+EIYP+AKV+LTTRNSDDWVKSV+ST +R + + KI + F + K+ ++ P++ L+ DDE+LK+ +E++NE VR+ VPKERLLEFNAK+GW PLC FL+LP+PNE +PFVN +++F ++ + K++++ G + + LT G L L Sbjct: 1 MTADSNKLFVIGAGQMRTGTTSLKSALEKLYGGKVYHMDEILFNGVDHIGLWIKALDQGHLCKELSEEIFTGYCAAVDNPTATFYQDLIEIYPDAKVILTTRNSDDWVKSVRSTIIRKGPIMNILEKISLWNQRIFRFEELCVKLRWHSFHVPYEILQYDDEVLKESFEKYNERVRQTVPKERLLEFNAKDGWTPLCEFLDLPIPNEPFPFVNNSEEFMDKIKSDITKTLVKFGSITVLLTFGILHL 247 The following BLAST results are available for this feature:
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000647 ID=SMED30000647|Name=Cell wall integrity and stress response component 1|organism=Schmidtea mediterranea sexual|type=transcript|length=943bpback to top protein sequence of SMED30000647-orf-1 >SMED30000647-orf-1 ID=SMED30000647-orf-1|Name=SMED30000647-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=257bp MNHRKNEILVIGAGQMRTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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