Protocadherin 2 gamma c6 sCP1
|
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30000445 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Human
Match: PCDH17 (protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]) HSP 1 Score: 219.55 bits (558), Expect = 1.474e-58 Identity = 193/642 (30.06%), Postives = 294/642 (45.79%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILV----TDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESR-------FRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNA-----PQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE 2111
L +D+DS L +KQ IDRE LC + N C L ++ N++E+ I+V + D NDN P F Q I EN G R PL A D D + +Y L + F L K DG P L+I LDRE+ + +T L A+DG E R + +I +K+ D NDN+P FE P Y+ + EN P+ +++ TD DE NG + + + + ++F++D +R NLDYE+ E + A+D G N + + + +++++ ND +P I FV Q ++ E ++A V+V+D DS N QLQC +L F+ N +++ T + +DRE + + VT+ D PLN+ S I I D NDNPP+FT+ +Y Q+ EN E ++ A D DL NG V+Y I + S Y ++ NG IY +SF+FE+ + F V+A D G P L S++T+ V + D NDNA P V N +G+L+ + A D D + IV + + L +DP +G+IRT +P + T + V+
Sbjct: 74 LLDVDADSGLLYTKQRIDRESLC------RHNAKCQ--------LSLEVFANDKEI--CMIKVEIQDINDNAPSFSSDQI-EMDISENAAPGTRFPLTSAHDPDAGENGLRTYLL----TRDDHGLFGLDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPR-SATVQINVKVIDSNDNSPVFEAPSYLVELPENA---PLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSID-------PKTGLIRVKGNLDYEE-NGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG-----ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEY------NVTIVARD-GGSPPLNSTKSFAIKILDENDNPPRFTKGLYVLQVHENNIPGEYL--GSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDH----LFEIDPSSGEIRTLHPFWEDVTPVVELVVK 664 HSP 2 Score: 91.6633 bits (226), Expect = 4.842e-18 Identity = 126/501 (25.15%), Postives = 204/501 (40.72%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVT-DEDEDENG-RIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQ---LQCSLLTPRNILMIEESRFRHPVNIYKQFSL-RTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFT-QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI---------QDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRAS--KLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
I ++I+DINDNAP F I EN F + D D ENG R L + + +F LD+ + G ++ LD EQ H + A DGG S+T + +++++ ND SP + + + E ++ + +DAD N S P R R +I + L R N+D E N ID VQ D N IP + ++ +I D NDN P +V G + E V A + D+D NG++ + ++ F+++ Y + D E + Y+ +VA D G P L+S+ + ++I D+NDN P+F++ + V EN G +G + A D D L ++ + + + S ++++P G I + E+T F V +K+ S L A + +TV D+ND+ P L
Sbjct: 118 IKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDD-----HGLFGLDVKSRGDGTKFPELVIQKALDREQQNH-HTLVLTALDGGEPPRSATVQINVKVIDSNDNSPVF------EAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVP--------DRVRELFSIDPKTGLIRVKGNLDYEENGMLEID------VQARDLGPNPIPAHCKVTVKLI--DRNDNAPSIGFVSVRQGALSEAAPPGTVI--ALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSP-PLNSTKSFAIKILDENDNPPRFTKGLYVLQVHENNIPGEYLGSVLAQDPD-LGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKD-SGAPAHLESNATVRVTVLDVNDNAPVIVL 585 HSP 3 Score: 87.0409 bits (214), Expect = 1.141e-16 Identity = 80/314 (25.48%), Postives = 145/314 (46.18%), Query Frame = 3
Query: 1371 LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQ---------DFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIP 2285
L T Q IDRE+ ++K ++++ D EI + I + I D+NDN P F+ + I EN F + H D D NG TY + D K+ + F ++ ++ D E+++ ++ ++ A D G P R S++ I V++ D NDN+P F + + EN +G ++ +NATD D P + ++ + S +R +L ++DP TG IR + +D E+ + V++++ N + + + + D ND+ P+ I +++QG + E+ P
Sbjct: 84 LYTKQRIDRESL--CRHNAKCQLSLEVFANDKEICM-----IKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAH--DPDAGENGLRTYLLTRDDHGLFGLDVKSRGDGTKFP------ELVIQKALDREQQNHHTLVLTALDGGEPPR-SATVQINVKVIDSNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGP-NGEVLYSFSSYVPDRVRELFSIDPKTGLIRVKGNLDYEENGMLEIDVQARDLGP--NPIPAHCKVTVKLIDRNDNAPS------------IGFVSVRQGALSEAAP 366 HSP 4 Score: 77.411 bits (189), Expect = 1.112e-13 Identity = 124/506 (24.51%), Postives = 207/506 (40.91%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIE--ENKPLGYRIPLPKAQDLDNAT-----FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP------IFQILVTDEDEDENGRIDLKMHNSG-------------------QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP--LNTNASIFIIINDVNDNPPKFTQNVY---YGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVR 1838
I V V D NDN+PVF + P +E EN PLG + A D D +S SSY + +L F + K G+ + + LD E+ M + A D + N ++T+K+ D NDNAP I ++++ + + I + VTD D +NG++ ++ G +E + +T+ + D+ + + + + IVA+DGG L+ST + I+IL+ ND P RF + G + + E + + L V D D N + P +I V+IY S+ T N A F + + D+ P L +NA++ + + DVNDN P +++ N ++ + + A D D +G++TY I D ++ F ID +G+I F + + +V TD G P LS+ + +I+R
Sbjct: 229 INVKVIDSNDNSPVF---EAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVREL-----FSIDP--KTGL--IRVKGNLDYEENGMLEIDVQARD-LGPNPIPAHCKVTVKLIDRNDNAPS----IGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDNFYTV-VTDRPLDR--------------ETQDEYNVTIVARDGGSPPLNSTKSFAIKILDENDNPP--RFTK-GLYV---LQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHI---------GDVSIYTYVSVNPT-NGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVD---GNDDHLFEIDPSSGEIRTLHPFWEDVTPVVELVVKVTDHGKPT-LSAVAKLIIR 682
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Human
Match: PCDH17 (protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]) HSP 1 Score: 219.55 bits (558), Expect = 9.291e-58 Identity = 196/647 (30.29%), Postives = 296/647 (45.75%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILV----TDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRF--VRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESR-------FRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTY-----HIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNA-----PQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE 2111
L +D+DS L +KQ IDRE LC + N C L ++ N++E+ I+V + D NDN P F Q I EN G R PL A D D + +Y L + F L K DG P L+I LDRE+ + +T L A+DG E R + +I +K+ D NDN+P FE P Y+ + EN P+ +++ TD DE NG + + + + ++F++D +R NLDYE+ E + A+D G N + + + +++++ ND +P I F VR G ++ E ++A V+V+D DS N QLQC +L F+ N +++ T + +DRE + + VT+ D PLN+ S I I D NDNPP+FT+ +Y Q+ EN E ++ A D DL NG V+Y HI D S Y ++ NG IY +SF+FE+ + F V+A D G P L S++T+ V + D NDNA P V N +G+L+ + A D D + IV + + L +DP +G+IRT +P + T + V+
Sbjct: 74 LLDVDADSGLLYTKQRIDRESLC------RHNAKCQ--------LSLEVFANDKEI--CMIKVEIQDINDNAPSFSSDQIEM-DISENAAPGTRFPLTSAHDPDAGENGLRTYLL----TRDDHGLFGLDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPR-SATVQINVKVIDSNDNSPVFEAPSYLVELPENA---PLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSID-------PKTGLIRVKGNLDYEE-NGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG-------ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEY------NVTIVARD-GGSPPLNSTKSFAIKILDENDNPPRFTKGLYVLQVHENNIPGEYL--GSVLAQDPDLGQNGTVSYSILPSHIGDV---SIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDH----LFEIDPSSGEIRTLHPFWEDVTPVVELVVK 664 HSP 2 Score: 92.0485 bits (227), Expect = 4.107e-18 Identity = 126/501 (25.15%), Postives = 204/501 (40.72%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVT-DEDEDENG-RIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQ---LQCSLLTPRNILMIEESRFRHPVNIYKQFSL-RTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFT-QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI---------QDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRAS--KLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
I ++I+DINDNAP F I EN F + D D ENG R L + + +F LD+ + G ++ LD EQ H + A DGG S+T + +++++ ND SP + + + E ++ + +DAD N S P R R +I + L R N+D E N ID VQ D N IP + ++ +I D NDN P +V G + E V A + D+D NG++ + ++ F+++ Y + D E + Y+ +VA D G P L+S+ + ++I D+NDN P+F++ + V EN G +G + A D D L ++ + + + S ++++P G I + E+T F V +K+ S L A + +TV D+ND+ P L
Sbjct: 118 IKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDD-----HGLFGLDVKSRGDGTKFPELVIQKALDREQQNH-HTLVLTALDGGEPPRSATVQINVKVIDSNDNSPVF------EAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVP--------DRVRELFSIDPKTGLIRVKGNLDYEENGMLEID------VQARDLGPNPIPAHCKVTVKLI--DRNDNAPSIGFVSVRQGALSEAAPPGTVI--ALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPP-LNSTKSFAIKILDENDNPPRFTKGLYVLQVHENNIPGEYLGSVLAQDPD-LGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKD-SGAPAHLESNATVRVTVLDVNDNAPVIVL 585 HSP 3 Score: 87.4261 bits (215), Expect = 1.021e-16 Identity = 80/314 (25.48%), Postives = 145/314 (46.18%), Query Frame = 3
Query: 1371 LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQ---------DFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIP 2285
L T Q IDRE+ ++K ++++ D EI + I + I D+NDN P F+ + I EN F + H D D NG TY + D K+ + F ++ ++ D E+++ ++ ++ A D G P R S++ I V++ D NDN+P F + + EN +G ++ +NATD D P + ++ + S +R +L ++DP TG IR + +D E+ + V++++ N + + + + D ND+ P+ I +++QG + E+ P
Sbjct: 84 LYTKQRIDRESL--CRHNAKCQLSLEVFANDKEICM-----IKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAH--DPDAGENGLRTYLLTRDDHGLFGLDVKSRGDGTKFP------ELVIQKALDREQQNHHTLVLTALDGGEPPR-SATVQINVKVIDSNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGP-NGEVLYSFSSYVPDRVRELFSIDPKTGLIRVKGNLDYEENGMLEIDVQARDLGP--NPIPAHCKVTVKLIDRNDNAPS------------IGFVSVRQGALSEAAP 366 HSP 4 Score: 77.411 bits (189), Expect = 1.218e-13 Identity = 124/506 (24.51%), Postives = 207/506 (40.91%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIE--ENKPLGYRIPLPKAQDLDNAT-----FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP------IFQILVTDEDEDENGRIDLKMHNSG-------------------QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP--LNTNASIFIIINDVNDNPPKF---TQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVR 1838
I V V D NDN+PVF + P +E EN PLG + A D D +S SSY + +L + K G+ + + LD E+ M + A D + N ++T+K+ D NDNAP I ++++ + + I + VTD D +NG++ ++ G +E + +T+ + D+ + + + + IVA+DGG L+ST + I+IL+ ND P RF + G + + E + + L V D D N + P +I V+IY S+ T N A F + + D+ P L +NA++ + + DVNDN P T +++ N ++ + + A D D +G++TY I D ++ F ID +G+I F + + +V TD G P LS+ + +I+R
Sbjct: 229 INVKVIDSNDNSPVF---EAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVREL-------FSIDPKTGL--IRVKGNLDYEENGMLEIDVQARD-LGPNPIPAHCKVTVKLIDRNDNAPS----IGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDNFYTV-VTDRPLDR--------------ETQDEYNVTIVARDGGSPPLNSTKSFAIKILDENDNPP--RFTK-GLYV---LQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHI---------GDVSIYTYVSVNPT-NGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVD---GNDDHLFEIDPSSGEIRTLHPFWEDVTPVVELVVKVTDHGKPT-LSAVAKLIIR 682
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Human
Match: PCDHGC4 (protocadherin gamma subfamily C, 4 [Source:HGNC Symbol;Acc:HGNC:8717]) HSP 1 Score: 213.001 bits (541), Expect = 2.202e-56 Identity = 183/585 (31.28%), Postives = 283/585 (48.38%), Query Frame = 3
Query: 243 INNGLFILDSDSN-LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDG--VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIF-QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNS--SNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF------SQSHFAFFVDENVEIGHLIGQINATDRDS 1958
+N F +D DS L + IDRE LC G +C L+F ++ EM + + D ND+ P FP Q I E P G R PL KAQD D + S+SSY+L ++ F L K DG VP L++ LDREK S Y L A+DG R +G E+ + + D+NDNAP F++ Y ++ E+ + Q+ +D D +G + + + +F+L + GK+ + LD+E + +EF + A+DGG ++ +LR+ +L+VND +P I ++ E ++A + V D DS N SL P ++ +S FR+ QFSL T +DREA + I+VT D N PL+T+ +IF+ I+DVNDNPP F Q + + E NN + ++ A+D D LN ++Y + + +N S + + ++ Q G ++ ++SFD+E+ F V A D+G+P LSS+ T+ + + D NDNAP S + +V GHLI ++ A D DS
Sbjct: 70 VNQRHFRVDLDSGALLIKNPIDREALC------------GLSASCIVPLEF-VTEGPLEMYRAEVEIV--DVNDHAPRFPRQQLDL-EIGEAAPPGQRFPLEKAQDADVGSNSISSYRLS------SNEHFALDVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPR-SGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLH---PTTGKLTL----LGPLDFESENY-YEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPYITVTSELG------TLPESAEPGTVVALISVQDPDSGSNG-DVSLRIPDHLPFALKSAFRN------QFSLVTAGPLDREAKSSY----DIMVTAS--DAGNP-PLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPE--NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPP-LSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLITKVTAVDLDS 600 HSP 2 Score: 123.25 bits (308), Expect = 7.857e-28 Identity = 158/591 (26.73%), Postives = 246/591 (41.62%), Query Frame = 3
Query: 522 LGY-----RIPLPK-----------AQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFK----DGVPYLIITSTLDREK-TSMYTFTLIAIDGV-EGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQI-LVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQN-------IDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS-LPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPT 2201
LGY R P+P+ AQD T S+S+ +L++ ++ +HF+ G L+I + +DRE + ++ ++ V EG + E+ +I D+ND+AP+F R I E F + D D N ++ + N+ F LD+ +S G + ++ LD E+ + + A DGG S TA LR+ +L+VND +P QQ + S+ E + +L + SD D L P + S P + FSL T +D E+ + D V+ D + + + S+ + + DVNDN P T G + E+ V A I D D NG V+ I D + FR + + D E +S Y +V A+D G+P LS+ TI + I D NDN P F Q FV EN G L+ + A+D DS L + + AS I+L+P TG + D E+T T+ F V++++ R L + + V DLND+ P
Sbjct: 24 LGYVCGQIRYPVPEESQEGTFVGNVAQDFLLDTDSLSARRLQVAGEVNQ-------RHFRVDLDSGA--LLIKNPIDREALCGLSASCIVPLEFVTEGPLEMYRAEV--EIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSS------NEHFALDVKKRSDGSLVPELLLEKPLDREK-QSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAF------QQSSYRISVLESAPAGMVLIQLNASDPD----------LGPSGNVTFYFSG-HTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFD------VRARDGGSPA-MEQHCSLRVDLLDVNDNAPYITVTSELGTLPESAEPGTVV--ALISVQDPDSGSNGDVSLRIPDHLPFALKSAFR---NQFSLVTAGPLDREAKSSYDIMVTASDAGNPP-LSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARD--RGNPPLSSTVTVRLFVLDLNDNAPA 564 HSP 3 Score: 92.8189 bits (229), Expect = 2.170e-18 Identity = 100/372 (26.88%), Postives = 165/372 (44.35%), Query Frame = 3
Query: 1125 IQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS---------LPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
++I++VND +P RF R QQ+ I E + + DAD N + L+ ++ + R ++ + L + +DRE D ++++T D N P + A + + + DVNDN P F Q+ Y + E+ V + ++A+D DL +G VT++ F + GK+ DFE E+ Y F V A D G P + ++ V + D NDNAP + + + E+ E G ++ I+ D DS +P+H + F +KS +N+ S L+T PL DRE S+ V ++ NP L I + + D+ND+PP+F
Sbjct: 121 VEIVDVNDHAP--RFPR--QQLD--LEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFALDVKK-RSDGSLVPELLLE--KPLDREKQS----DYRLVLTAV--DGGNP-PRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQ--LNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSPA-MEQHCSLRVDLLDVNDNAPYITVTSELGTLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDH--LPFALKSAFRNQFS-LVTAGPL----------DREAKSSYDIMVTASDAGNPP-----LSTHRTIFLNISDVNDNPPSF 455
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Human
Match: PCDHGC4 (protocadherin gamma subfamily C, 4 [Source:HGNC Symbol;Acc:HGNC:8717]) HSP 1 Score: 213.386 bits (542), Expect = 3.106e-56 Identity = 180/585 (30.77%), Postives = 279/585 (47.69%), Query Frame = 3
Query: 243 INNGLFILDSDSN-LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDG--VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIF-QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNS--SNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF------SQSHFAFFVDENVEIGHLIGQINATDRDS 1958
+N F +D DS L + IDRE LC G +C L+F ++ EM + + D ND+ P FP Q I E P G R PL KAQD D + S+SSY+L ++ F L K DG VP L++ LDREK S Y L A+DG R +G E+ + + D+NDNAP F++ Y ++ E+ + Q+ +D D +G + + + +F+L ++ + LD+E + +EF + A+DGG ++ +LR+ +L+VND +P I ++ E ++A + V D DS N SL P ++ +S FR+ QFSL T +DREA S + V D N PL+T+ +IF+ I+DVNDNPP F Q + + E NN + ++ A+D D LN ++Y + + +N S + + ++ Q G ++ ++SFD+E+ F V A D+G+P LSS+ T+ + + D NDNAP S + +V GHLI ++ A D DS
Sbjct: 70 VNQRHFRVDLDSGALLIKNPIDREALC------------GLSASCIVPLEF-VTEGPLEMYRAEVEIV--DVNDHAPRFPRQQL-DLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLS------SNEHFALDVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPR-SGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLH-------PTTGKLTLLGPLDFESENY-YEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPYITVTSELG------TLPESAEPGTVVALISVQDPDSGSNG-DVSLRIPDHLPFALKSAFRN------QFSLVTAGPLDREAK------SSYDIMVTASDAGNP-PLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPE--NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPP-LSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLITKVTAVDLDS 600 HSP 2 Score: 122.865 bits (307), Expect = 1.234e-27 Identity = 159/601 (26.46%), Postives = 248/601 (41.26%), Query Frame = 3
Query: 522 LGY-----RIPLPK-----------AQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFK----DGVPYLIITSTLDREK-TSMYTFTLIAIDGV-EGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQI-LVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQN-------IDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSL-----------PEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPT 2201
LGY R P+P+ AQD T S+S+ +L++ ++ +HF+ G L+I + +DRE + ++ ++ V EG + E+ +I D+ND+AP+F R I E F + D D N ++ + N+ F LD+ +S G + ++ LD E+ + + A DGG S TA LR+ +L+VND +P QQ + S+ E + +L + SD D L P + S P + FSL T +D E+ + D V+ D + + + S+ + + DVNDN P T G + E+ V A I D D NG V+ I D + FR + + D E +S Y +V A+D G+P LS+ TI + I D NDN P F Q FV EN G L+ + A+D DS P ++D+ AS I+L+P TG + D E+T T+ F V++++ R L + + V DLND+ P
Sbjct: 24 LGYVCGQIRYPVPEESQEGTFVGNVAQDFLLDTDSLSARRLQVAGEVNQ-------RHFRVDLDSGA--LLIKNPIDREALCGLSASCIVPLEFVTEGPLEMYRAEV--EIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSS------NEHFALDVKKRSDGSLVPELLLEKPLDREK-QSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAF------QQSSYRISVLESAPAGMVLIQLNASDPD----------LGPSGNVTFYFSG-HTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFD------VRARDGGSPA-MEQHCSLRVDLLDVNDNAPYITVTSELGTLPESAEPGTVV--ALISVQDPDSGSNGDVSLRIPDHLPFALKSAFR---NQFSLVTAGPLDREAKSSYDIMVTASDAGNPP-LSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDV----------SASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARD--RGNPPLSSTVTVRLFVLDLNDNAPA 564 HSP 3 Score: 93.2041 bits (230), Expect = 1.539e-18 Identity = 100/372 (26.88%), Postives = 165/372 (44.35%), Query Frame = 3
Query: 1125 IQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS---------LPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
++I++VND +P RF R QQ+ I E + + DAD N + L+ ++ + R ++ + L + +DRE D ++++T D N P + A + + + DVNDN P F Q+ Y + E+ V + ++A+D DL +G VT++ F + GK+ DFE E+ Y F V A D G P + ++ V + D NDNAP + + + E+ E G ++ I+ D DS +P+H + F +KS +N+ S L+T PL DRE S+ V ++ NP L I + + D+ND+PP+F
Sbjct: 121 VEIVDVNDHAP--RFPR--QQLD--LEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFALDVKK-RSDGSLVPELLLE--KPLDREKQS----DYRLVLTAV--DGGNP-PRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQ--LNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSPA-MEQHCSLRVDLLDVNDNAPYITVTSELGTLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDH--LPFALKSAFRNQFS-LVTAGPL----------DREAKSSYDIMVTASDAGNPP-----LSTHRTIFLNISDVNDNPPSF 455
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Human
Match: PCDHGA5 (protocadherin gamma subfamily A, 5 [Source:HGNC Symbol;Acc:HGNC:8703]) HSP 1 Score: 197.208 bits (500), Expect = 1.731e-51 Identity = 190/624 (30.45%), Postives = 308/624 (49.36%), Query Frame = 3
Query: 255 LFILDSDSN-LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLE--LPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQD--FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF-------SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRT-RYPIDRE 2081
LF L+ S L + +IDREELC + +C +++F I N+ M+ + V + D NDN P F + + EN G R+ LP A+D D S+ SY+L L F L S + K+ P L++ LDREK +++ L A+DG + +G T I + + D NDNAP F Y ++ EN+ V + + TD DE NG++ N +E I++ F LD ++G ++ + +LDYE+ + ++VAQDGG +L ++A + + + +VND +PE+ +T SI E L ++A V D DS N ++ CS+ PRN+ F+ ++ + L TT+++DRE D I +TV D+ PL+T + I + + DVNDNPP F Q Y + E NN ++ A D D N +VTY + + F+ + + Y I+S G +Y +SFD+E+ V A+D G+P LSS+ ++ + + DQNDN P+ S + E G+L+ ++ A D+DS ++ + + + S+ L + TG++RT R +DR+
Sbjct: 74 LFALNPRSGSLVTAGRIDREELC------AQSPLC--------VVNFNILVENK-MKIYGVEVEIIDINDNFPRFRDEEL-KVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKY-----PELVLEQPLDREKETVHDLLLTALDGGDPVL-SGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNE-EEKISETFQ---LDSNLG----EISTLQSLDYEE-SRFYLMEVVAQDGG--ALVASAKVVVTVQDVNDNAPEVILT----SLTS--SISEDCLPGTVIALFSVHDGDSGENGEIACSI--PRNL------PFKLEKSVDNYYHLLTTRDLDREETS----DYNITLTVM--DHGTP-PLSTESHIPLKVADVNDNPPNFPQASYSTSVTE--NNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPP-LSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDS-GQNAWLSYRLLKASE---PGLFAVGLHTGEVRTARALLDRD 636 HSP 2 Score: 83.5741 bits (205), Expect = 1.470e-15 Identity = 93/354 (26.27%), Postives = 162/354 (45.76%), Query Frame = 3
Query: 1296 LTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDRE---ANEPF-LIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNG-------KIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKS-------QLIISL------ETLQQGQICESIP 2285
L R + ++ R + + SL T IDRE A P +++ I+V + Y E+ I D+NDN P+F ++ EN + A D D+ +N +Y + SSN ++F +D +G ++ Q D EKE+++ ++ A D G P LS ++ I V + D NDNAP F+ S ++ V EN+ +G + + ATD D K + + +++ + + S+ LD G+I T +D E++ V +++ L+ A +V+TV+D+ND+ P L + S +I+L ++ + G+I SIP
Sbjct: 59 LAERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVE----------IIDINDNFPRFRDEELKVKVNENAAAGTRLVLP--FARDADVGVNSLRSYQL-----SSN-LHFSLDVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDP-VLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGK-LTYSFRNE-EEKISETFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDGGA----LVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACSIP 387 HSP 3 Score: 80.4925 bits (197), Expect = 1.193e-14 Identity = 122/486 (25.10%), Postives = 209/486 (43.00%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE-QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFS-LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRA--SKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
+ ++I DINDN P+F + EN +L D D + + S Q N F+LD++ + G+ ++ LD E + H + + A DGG LS T +R+ +L+ ND +P F + ++ +I GT L + +D D IN +L S RN EE + + + T Q++D E + +L++ V Q + L +A + + + DVNDN P+ I E+ V ++H D D NG++ I +N + F+++ Y+ ++ D E+ S Y+ + D G P LS+ S I +++ D NDN P F Q+ ++ V EN G I + A D DS ++ + + + D+ A S ++++ TG + D E+ + +V +S NP L + + V D ND+ P
Sbjct: 119 VEVEIIDINDNFPRFRDEELKVKVNENAAAGTRL-VLPFARDAD----VGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPELVLEQPLDREKETVH--DLLLTALDGGDPVLSGTTHIRVTVLDANDNAP--LFTPSEYSVSVPENIPVGTR----LLMLTATDPDEGINGKLTYSF---RN----EEEKISETFQLDSNLGEISTLQSLDYEESRFYLME----VVAQ-----DGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH--DGDSGENGEIACSIP--RN----LPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPP-LSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDS-GDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPP-----LSSNVSLSLFVLDQNDNTP 560
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 140.969 bits (354), Expect = 2.318e-33 Identity = 165/594 (27.78%), Postives = 263/594 (44.28%), Query Frame = 3
Query: 444 VDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFT-LDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRH--PVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIR--TRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFR 2207
V D ND+ P I T+EEN +G + A D D+ + Y +E S DF + + + T LDRE T+ Y+ + A D + NT T I + ++DINDNAP F++ Y TI E + I + D DED+ +I ++ + +E +F+ LDI DQ G + + + D H +I A D G L + + I +VN +P N + I E + + ++ D D N R + I+ S+F P + + ++DRE F +IVT D+ + PLNT+ I +I++D+NDN P+FT + Y I E+I F+ + A D D+ NG V Y + + +S + FR+D +G + S D E+ ++ + A D+G P+ LS++S I + + D NDNAP F Q + ++ EN +G +G I A D D ++ DI F + + + + G +R TR D E + FF E + S L + I V D+ND+ P +
Sbjct: 110 VIDINDHAPTL-IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSME------GSEDFII----DEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTT-IAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQ--KITYRIEEADRE----VFSILDIGDQ--GAILSVSGELKRQD-----HKVRVEISATDQG--GLQGRCVVNVFIDDVNS-APYF----NDHPFS--VKIPEHSPIGYPVITLKAEDHDRGDNA--------RIVYSIDSSQFFRIDP----SSGDISVSSDLDREDRATF----SVIVTAS--DHASP-PLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQ--VSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPS-LSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADE-GDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKAN-KFFFELQASS---GQLSSTVPVRIHVSDVNDNKPALK 642 HSP 2 Score: 121.709 bits (304), Expect = 1.778e-27 Identity = 153/594 (25.76%), Postives = 261/594 (43.94%), Query Frame = 3
Query: 429 FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQV-SDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ + V D NDN PVF + TI EN + I KA D D T Y + +G L + G + + +D K S T + A DG + ++ +TI + DIND+AP + T++ENV I + + ++ DED NG I M S I+D+ G ++ LD E + K+ A+D G SL+++ T+ + + ++ND +P F + +T + G+ +I+ V +D D I IEE+ ++ + I + E D K+ V + D L + + I+DVN + P F + + +I E ++ + + A D D N ++ Y I ++ +FRID +G I S D E + +S IV A+D P L++S+ I V + D NDN+PQF+ S +A + E++ +G Q++A D D P + + + + S + + +L LD +G +R +DRE+ + I + +++ R L + I +T+ D+ND+ PTF
Sbjct: 1 MVEITVVDVNDNAPVFA-SDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGG-----LTIDYSTG--EVTLRERID-AKNSPITAVIRAKDGAQPALSS-TVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDF---------IIDEDSG----LIKTTKLLDRETTAR-YSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPT--FDKKEYNVTISEEMPRGS---QIITLKAVDNDEDQKIT------------YRIEEAD----REVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGG---LQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPE--HSPIGYPVITLKAEDHDRGDNARIVYSID------SSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPP-LNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGP-NGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARD--RGTPSLSAASEITLTLSDVNDNAPTF 533 HSP 3 Score: 92.4337 bits (228), Expect = 1.512e-18 Identity = 81/260 (31.15%), Postives = 124/260 (47.69%), Query Frame = 3
Query: 1500 IIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN---PSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQI 2270
I + DVNDN P F + Y I ENI V A + A D+D NGKV Y + +SS ID G++ + D K S + ++ A D P LSS+ + + + D ND+AP + ++ENV IG +G++ A D DS P I+K + S+ +D +G I+T +DRE T+ + V +++ PS L I + ++D+ND+ PTF D + + IS E + QI
Sbjct: 4 ITVVDVNDNAPVFASDSYNVTILENITIPAVI--ATVKATDEDFGTNGKVHYSM---ASSSGIGGLTIDYSTGEVTLRERID-AKNSPITAVIRAKDGAQP-ALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNG-----IIKYSME--GSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPS-----LNTSTTIAVVLKDINDNAPTF---DKKEYNVTISEEMPRGSQI 241 HSP 4 Score: 79.337 bits (194), Expect = 1.497e-14 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYC-TIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRN-TGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIR 1166
I V +DD NDN+P F + Y TI E+ P+G A D D + Y L + F L + G L ++S LDRE+ ++ + A D G + + +EIT+ + D+NDNAP FE+ Y I EN V + I+ D DE +N I ++ K+F ++ + G V+ RA DYE + F F++ A G LSST +RI + +VND P ++
Sbjct: 411 IEVILDDINDNSPQF--TSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDR--TSGT--LRVSSKLDREQFAVIVLPIFARD--RGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADA---KLFDIEEDAEQNGVVRILTRA--EFDYEAKANKFFFELQASSG---QLSSTVPVRIHVSDVNDNKPALK 642 HSP 5 Score: 74.7146 bits (182), Expect = 3.472e-13 Identity = 144/585 (24.62%), Postives = 242/585 (41.37%), Query Frame = 3
Query: 258 FILDSDSNL-KVSKQIDREELCPPQMMLQLNKV-CGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPY-CTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAK--HFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKF-ERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNIL--MIEESRFRHPVNIYK----QFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRID---SQNG--KIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVD--ENVEIGHLIGQINATDRD 1955
FI+D DS L K +K +DRE + + + S++T S I V + D NDN P F + Y TI E P G +I KA +DN +Y++E +D E+ D L ++ L R+ + + I + G+ + + I D+N +AP F + P ++ + + I P+ + D D +N RI + +S + F +D S G + ++LD E +F + A D L+++ + + + ++ND SP+ F + T I GT +++QVS D+ I P I+ + ES + +++ +LR + +DRE F + I++ + D L+ + I + ++DVNDN P F Q Y I EN I A D D N +++ I ++A F I+ QNG +I FD+E ++ F + G +LSS+ + + + D NDN P F ++ +NV++ IG I A D D
Sbjct: 165 FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNT-----------------STTIAVVLKDINDNAPTFD--KKEYNVTISEEMPRGSQIITLKA--VDNDEDQKITYRIE-------EADREVFSILDIGDQGAILSVSGELKRQDHKVR----VEISATDQGGLQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSS------QFFR---IDPSSGDISVS----SDLDRED-RATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQ--FTSSSYAATISEDIPVGT------SFLQVSAIDADIG--------PNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQ---FAV---IVLPIFARDRGTP-SLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTV--GTIVARDADEGDNADISFRI---FGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSG---QLSSTVPVRIHVSDVNDNKPALKD--FVILMNRFDNVQMARQIGFIPAFDPD 669
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 140.584 bits (353), Expect = 3.202e-33 Identity = 165/594 (27.78%), Postives = 263/594 (44.28%), Query Frame = 3
Query: 444 VDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFT-LDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRH--PVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIR--TRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFR 2207
V D ND+ P I T+EEN +G + A D D+ + Y +E S DF + + + T LDRE T+ Y+ + A D + NT T I + ++DINDNAP F++ Y TI E + I + D DED+ +I ++ + +E +F+ LDI DQ G + + + D H +I A D G L + + I +VN +P N + I E + + ++ D D N R + I+ S+F P + + ++DRE F +IVT D+ + PLNT+ I +I++D+NDN P+FT + Y I E+I F+ + A D D+ NG V Y + + +S + FR+D +G + S D E+ ++ + A D+G P+ LS++S I + + D NDNAP F Q + ++ EN +G +G I A D D ++ DI F + + + + G +R TR D E + FF E + S L + I V D+ND+ P +
Sbjct: 469 VIDINDHAPTL-IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSME------GSEDFII----DEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTT-IAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQ--KITYRIEEADRE----VFSILDIGDQ--GAILSVSGELKRQD-----HKVRVEISATDQG--GLQGRCVVNVFIDDVNS-APYF----NDHPFS--VKIPEHSPIGYPVITLKAEDHDRGDNA--------RIVYSIDSSQFFRIDP----SSGDISVSSDLDREDRATF----SVIVTAS--DHASP-PLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQ--VSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPS-LSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADE-GDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKAN-KFFFELQASS---GQLSSTVPVRIHVSDVNDNKPALK 1001 HSP 2 Score: 132.88 bits (333), Expect = 6.107e-31 Identity = 180/666 (27.03%), Postives = 299/666 (44.89%), Query Frame = 3
Query: 255 LFILDSDSN-LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAID-GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQ-ILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRN----------GQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFI-VVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV-ESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
LF LD+ S ++++K +DRE L + +L++ T +D IS S + V V D DN+P+F + + I E+ P+G + A+DLD+ + ++E GN + LA + K GV + + LDRE S+ +IA D G +T EIT+ D+NDNAP F Y TI EN+ + + + TDED NG++ M +S + I L I D S G+V + R +D + I A+DG + +LSST L I ++++ND +P + + G+++ ++IDE + N I+ Y D +I+ E+S ++TT+ +DRE + + VT + D P LNT+ +I +++ D+NDN P F + Y I E + + + A D D + K+TY I++ + ++ +D + S S + +++ + + ATDQG L + V I D N +AP F+ F+ + E+ IG+ + + A D D + R + DS S+ +DP +G I +DRE +T + V S + S N Q I + + D+ND+ P F
Sbjct: 212 LFTLDTMSGEIRLAKSMDREVL--DKHILKV--------TAYERVDPTIS------ASTTVVVHVLDVQDNSPIFE-KDSYFGEIREDAPIGTTVLSVFARDLDSG----ENGEIEYSLGEGNGKNL-LAINAKSGV--IQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVV--DVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASS-----SGIGGLTI-DYSTGEVTLRER----IDAKN--SPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIID---------------EDSGL-----------IKTTKLLDRETTARY----SLKVTAR----DMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIIT--LKAVDNDE--DQKITYRIEE---ADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGG---LQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHD---RGDNARIVYSIDS----SQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQ---IEVILDDINDNSPQF 784 HSP 3 Score: 98.2117 bits (243), Expect = 3.024e-20 Identity = 123/443 (27.77%), Postives = 195/443 (44.02%), Query Frame = 3
Query: 963 IFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLL--TPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN---PSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQI 2270
+FTLD + ++R ++D E L K+ A + ++S++ T+ + +L+V D SP +I I LS V D DS N +++ SL +N+L I K ++T +DRE LI +I + D P + A + I + DVNDN P F + Y I ENI V A + A D+D NGKV Y + +SS ID G++ + D K S + ++ A D P LSS+ + + + D ND+AP + ++ENV IG +G++ A D DS P I+K + S+ +D +G I+T +DRE T+ + V +++ PS L I + ++D+ND+ PTF D + + IS E + QI
Sbjct: 212 LFTLDTM-------SGEIRLAKSMDREVLDKHI-LKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLS------VFARDLDSGENGEIEYSLGEGNGKNLLAINA----------KSGVIQTAAPLDRETLS--LIRLDVIAS------DKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVI--ATVKATDEDFGTNGKVHYSM---ASSSGIGGLTIDYSTGEVTLRERID-AKNSPITAVIRAKDGAQP-ALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNG-----IIKYSME--GSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPS-----LNTSTTIAVVLKDINDNAPTF---DKKEYNVTISEEMPRGSQI 600 HSP 4 Score: 79.337 bits (194), Expect = 1.740e-14 Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYC-TIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRN-TGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIR 1166
I V +DD NDN+P F + Y TI E+ P+G A D D + Y L + F L + G L ++S LDRE+ ++ + A D G + + +EIT+ + D+NDNAP FE+ Y I EN V + I+ D DE +N I ++ K+F ++ + G V+ RA DYE + F F++ A G LSST +RI + +VND P ++
Sbjct: 770 IEVILDDINDNSPQF--TSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDR--TSGT--LRVSSKLDREQFAVIVLPIFARD--RGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADA---KLFDIEEDAEQNGVVRILTRA--EFDYEAKANKFFFELQASSG---QLSSTVPVRIHVSDVNDNKPALK 1001 HSP 5 Score: 75.0998 bits (183), Expect = 3.262e-13 Identity = 144/585 (24.62%), Postives = 242/585 (41.37%), Query Frame = 3
Query: 258 FILDSDSNL-KVSKQIDREELCPPQMMLQLNKV-CGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPY-CTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAK--HFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKF-ERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNIL--MIEESRFRHPVNIYK----QFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRID---SQNG--KIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVD--ENVEIGHLIGQINATDRD 1955
FI+D DS L K +K +DRE + + + S++T S I V + D NDN P F + Y TI E P G +I KA +DN +Y++E +D E+ D L ++ L R+ + + I + G+ + + I D+N +AP F + P ++ + + I P+ + D D +N RI + +S + F +D S G + ++LD E +F + A D L+++ + + + ++ND SP+ F + T I GT +++QVS D+ I P I+ + ES + +++ +LR + +DRE F + I++ + D L+ + I + ++DVNDN P F Q Y I EN I A D D N +++ I ++A F I+ QNG +I FD+E ++ F + G +LSS+ + + + D NDN P F ++ +NV++ IG I A D D
Sbjct: 524 FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNT-----------------STTIAVVLKDINDNAPTFD--KKEYNVTISEEMPRGSQIITLKA--VDNDEDQKITYRIE-------EADREVFSILDIGDQGAILSVSGELKRQDHKVR----VEISATDQGGLQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSS------QFFR---IDPSSGDISVS----SDLDRED-RATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQ--FTSSSYAATISEDIPVGT------SFLQVSAIDADIG--------PNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQ---FAV---IVLPIFARDRGTP-SLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTV--GTIVARDADEGDNADISFRI---FGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSG---QLSSTVPVRIHVSDVNDNKPALKD--FVILMNRFDNVQMARQIGFIPAFDPD 1028
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0]) HSP 1 Score: 128.257 bits (321), Expect = 1.951e-29 Identity = 138/519 (26.59%), Postives = 227/519 (43.74%), Query Frame = 3
Query: 669 LIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRF----VRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTS--TITFFVESKN-PSRIFNDLIQEAMIVITVRDLNDSPPT 2201
+ I T D EK Y T+IA + N T + I+I+++D+NDN P F Y T++E + P+ + +D D G + + + + SI V +V A L + F + A+DGG S ++A + I +++ + +P+ +R + I G +I +K+ + D D N + E++ IY T+ +D + ++ L++ I T+ + + + I I D NDNPP+F+ ++ I E++ HE F + A+DKD NG+V Y I +S ID G++ D+E Y V ATD G P R SS+ T+ + + D NDNAP+F +S + V EN ++G++ A D+DSL E+ I + + S+ +D G + T+ IDRE S I+ E K P R A I+V D+ND+PP+
Sbjct: 595 VCIQKTFDFEKQKSYQTTVIATNA---NSETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSSF------------SINPVTGEVFAQKPLARGR----FHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAMSKVKYSIYSGDQD-------------HNFSIDEDTG-----KIY------VTRYLDADVHDTVLLN--IQATLPSGE-------SNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFY--VVQASDKDKKKNGEVRYSI---ISSHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPR-SSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSL-ENGQIVYRI-----TNGSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPR-----SSTASARISVLDVNDNPPS 1044 HSP 2 Score: 110.153 bits (274), Expect = 5.798e-24 Identity = 166/675 (24.59%), Postives = 277/675 (41.04%), Query Frame = 3
Query: 333 MLQLNKVCGSIHTCCHILDFQ-------ISCNNEEMQSNF-IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDA--DSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDRE-ANE---PFLI--DSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKD----------PSKSQLIISLETLQQGQICE 2276
L++++ G I T H LD++ ++ EE I V VDDENDN P F Q I E LG LP D D F V + + L + N K + L++ LDRE Y + A DG + + G+ +I+I D NDNAP F R Y ++ N+ I + + TD D EN RI + + N F + +Q I + + +VA D G SLSS+A + I +L SP + + + + ++ TL + I+A V ++ D+ + + S L P+ + + L +DRE A+E FL+ D +II+ E P + I D+NDN P++ + QI ++N + + + A D DL NG + Y + D + ID + G+I+ + D S F V A D G P LS+ ++ + D PQF ++ + + E+ IG + ++ A + K IR+ +++ ++ +T+D ++G + + D EK + V + N N ++I I ++D+ND+ P F + P + L++S + G E
Sbjct: 68 FLKVDERSGEISTIAH-LDYEKRSKFDIVAVKVEESGETIDILVEVDDENDNAPSF-ADQVVKLEISEFAQLGTSFALPTVTDGDGPKFDVHRFVI-LQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAK-IGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAP-SNSNFAI-----------SQSGVITTTASLLPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHL-MENSTLGS-IVARVSIAQQYRDTKLRLIGSSALCPQQ------------TDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQIII---------EHPQ------LLTIGDINDNAPQW----HSSQIHISLNRTQ-GGSRTLTAKDPDLGQNGWIRYSVLDTE------LVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSP-ALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANN-SQCGNSKRIRYSLQNQDEH-----LTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNA----NSETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGE 675 HSP 3 Score: 75.485 bits (184), Expect = 2.034e-13 Identity = 123/518 (23.75%), Postives = 216/518 (41.70%), Query Frame = 3
Query: 669 LIITSTLDREKTSMYTFT-LIAIDG---VEGNRNTGKTEITIKIRDINDNAPKFERP-IYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIR-TRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
L++ LDRE S + L+ DG +E + + I DINDNAP++ I+I N + D D +NG WI + LD SI K ++ N +D + +F++ A+DGG +LS+ + +L+ P+ F + Q+ GT K++A N QC + I +++ H ++ + D E + + TV + ++E + + I I + DVNDN P F N Y+ + E E + + A+D D G+V+YHI S + F I+ G+++ + + + +V A D G + +S+ I + + D++ PQFS+S + E++ G IG + A + +++ + S Q+ ++D TG+I TRY +D + T+ +++ PS N + +VI + D ND+PP F
Sbjct: 395 LLLCGILDRETASEHHLKFLLEKDGQIIIEHPQ-------LLTIGDINDNAPQWHSSQIHISL---NRTQGGSRTLTAKDPDLGQNG------------WI-RYSVLDTELVSIDKETGRIFVPNTIDC-NIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQ--FEKALWQVEIPEDTPIGTCLVKVVA-----------NNSQCG--NSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFEKQKSYQ------TTVIATNANSE---TSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLL--VVSASDMDSGTFGEVSYHIL-----SESSSFSINPVTGEVFAQKPLARGR---FHLVVSAKDGGGQSS-ENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAMSK--------VKYSIYSGDQDHN---FSIDEDTGKIYVTRY-LDADVHDTVLLNIQATLPSGESN----QTQVVIFIEDHNDNPPQF 837 HSP 4 Score: 72.7886 bits (177), Expect = 1.394e-12 Identity = 99/375 (26.40%), Postives = 167/375 (44.53%), Query Frame = 3
Query: 723 LIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRI 1841
L+ I + + +T++ I I D NDN P+F + +I+E++ + +P + + +D+D+ +NG + + +S + +++I DQ G Q+ + LDYE +++ ++ A D G SS TL I +L+VND +PE ++ + E + I+ V D DS+ N Q+ + I+E N+Y T ++IDRE + S + +++ +D P ++ AS I + DVNDNPP + I + I A D D LNG V Y Q + F + S NG +Y + + E V+ +DQG P R S + VRI
Sbjct: 806 LLNIQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISS-----HPGSSIEI-DQFTG----QLSTGSLLDYEAT-RNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEF------EKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEYFGIDEKLG----NVY------TKRSIDRE------VISHVDISIVAED-KGVPPRSSTASARISVLDVNDNPPSC---LSITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQ-----LQSSLFVVKS-NGDVYLRRQLNASDERHQRLSVIVSDQGVP-RKSVVCHVPVRI 1136 HSP 5 Score: 72.0182 bits (175), Expect = 2.907e-12 Identity = 75/263 (28.52%), Postives = 123/263 (46.77%), Query Frame = 3
Query: 381 ILDFQISCNNEEMQSNFIRVFVDDENDNNPVFP--IVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDF-ELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIF-QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSP 1157
+L+ Q + + E + +F++D NDN P F +V+ +I E+ L + +A D D Y + + G+S + + G S LD E T Y + A D R++ T + I + D+NDNAP+FE+ Y + EN I +++ D+D ENG+I ++ N G E+ +D+ +G V + ++D E + H + IVA+D G SSTA+ RI +L+VND P
Sbjct: 806 LLNIQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVE---ISIREDLKLHEPFYVVQASDKDKKKNGEVRYSI-ISSHPGSSIEIDQFTGQLSTG-------SLLDYEATRNYKLRVKATDLGIPPRSSNMT-LFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITN-GSEYFG-------IDEKLGNVYTK----RSIDREVISH-VDISIVAEDKGVPPRSSTASARISVLDVNDNPP 1043 HSP 6 Score: 68.9366 bits (167), Expect = 2.131e-11 Identity = 141/615 (22.93%), Postives = 244/615 (39.67%), Query Frame = 3
Query: 378 HILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLD---NATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAP-KFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNI-YKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIE-ENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
H+L ++ S +RV V D+NDN P I E+ +G + +A D+D N FS F+L S L + G L S+L K + + GV G EI+ + AP +F + Y+ TI E + P Q + + E + N I+ F++D + +R LD E L + K++ G+ + + +R+ N+ND P + + + E +A V D D+ L P ++ +S + P + QF T I A F + + +T++ D +T ++ I ++D+NDN P F++ +Y + + + F H DL G +TY + ++ FR+ ++G ++ + E Y V ATD G P+ +S ++ + + + P F ++ F F V EN +IG IG ++ E ++ + ++ ASK+ ++D G++ PIDRE+ +T F VE N + + +Q VI V D ND+ P F
Sbjct: 1695 HLLIIILTDGGSRNDSCTVRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFS---------FELLEDSSGSLDLVPETGDLVLRRLSSLQSWKIKLR----VVDHGVPGLYVEKNLEISNRNPQTEAKAPLEFLKQTYLSTIDEGL---PRGQFIAKLQPELAGLTYSIVEGN-----IDSAFSVD--------SEGVIRTNLELDREIL-ERYSLKVIGTGSGQQ-IGTRVDVRVN--NLNDNVPSFPMSKPRR-------VPENLRVGSYVATVGAKDVDN---------LAPLRYFLVSDSSGQTPTHFNIDQF----TGTIHLTAPLDFEVLPEHTLTIKATDGS----FDTFTNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAH----DLDARGALTYSL----GQGSSSIFRVAPESGALF-MKVLPPAGER-YLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLSGE------ESREFHYRIQDP---EASKIFSIDKF-GRLFVAGPIDREQRATHEFQVEIDN-EMMTSQKVQCKCHVI-VLDENDNLPVF 2230 HSP 7 Score: 51.6026 bits (122), Expect = 4.723e-6 Identity = 122/520 (23.46%), Postives = 213/520 (40.96%), Query Frame = 3
Query: 687 LDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKF--ERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQL-YHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLS-NKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVN-DNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIV-VATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTR----YPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
LDRE Y+ +I G + G T + +++ ++NDN P F +P R + EN+ V + + D D R L +SGQ + F +D + + LD+E L H+ K A DG S + L I + ++ND +P F + Q T + T S + A ++ D D+ L SL + S FR F + A E +L VTV D N +P +T+ + +II + + P F + + ++ EN N + + ++ H Y IQD + S F ID + G+++ + D E+ + + F V + + ++ +IV D+NDN P F+ + + +++ G IGQI A+D+DS + I+ + N ++TL+P TG I+ +D +T VE+++ + + + + + + S P F L
Sbjct: 1888 LDREILERYSLKVI---GTGSGQQIG-TRVDVRVNNLNDNVPSFPMSKP---RRVPENLRVGSYVATVGAKDVDNLAPLRYFLVSDSSGQTPTH--FNID-------QFTGTIHLTAPLDFEVLPEHTLTIK--ATDG---SFDTFTNLTIFVSDINDNAPT--FSKPLYQTT----VSPATFSPGQPFAKIEAHDLDAR-GALTYSLGQGSS------SIFRVAPESGALF-----MKVLPPAGERYL------VTVTATD--NGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLSGEES-REFH------YRIQDPEASK---IFSID-KFGRLFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVL--DENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLN----IVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVL 2343
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 126.716 bits (317), Expect = 4.978e-29 Identity = 153/609 (25.12%), Postives = 268/609 (44.01%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP--IFQILVTDEDEDE-NGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE--QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAY--VQVSDADSMINQ---LQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTN-ASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRID-----SQNGKIYNSQSFDFE----KESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
+++ ++D NDN P F Q ++E++ G+ + KA DLD + L + L + + + + + LD E + Y LIA DG R+ T + I I D+NDNAP+FE+ Y T+ E + P +F + TD D+DE + RI ++ G + + +I GK + + LD + S+ F + A D N L A +++ + ++ND SP +++ G + + + + + VQ D D + ++ ++ RN L+ ES FR N K F++R+ +DRE + + + I+ V+ +D +P A++ I + D+NDN P F + Y G +EE M+ + AD++ N TY + + S+ Y D S G + Q D+E ++ + I V+ R + + + V + D+ND+AP V E+V G IG+ ATDRD+ RF + S + I D G +R + +DRE + +E+ + S + I M+ + ++D+ND+ P
Sbjct: 1321 VQIVINDVNDNAPSFE-EQKYIGRVKESEGEGHDVITIKAHDLDKHS--------NLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDG----RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRI----------GKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFP-----ERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIV--RNKLINGESVFRIDQNTGKIFAMRS---LDREISS----EREFIIEVRAND--RGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDN-VFTYQLSE---ESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSD-----GRHDAEAAVHVALVDRNDHAPHI-HGATEHRVREDVPRGTSIGRYTATDRDA---GDTARFRINRQSDPKRQFTIDQD---GTLRVAHTLDREDIAVYNLIIEAYDNS----NNIGRQMVAVYLQDVNDNGP 1870 HSP 2 Score: 115.931 bits (289), Expect = 1.040e-25 Identity = 160/623 (25.68%), Postives = 276/623 (44.30%), Query Frame = 3
Query: 438 VFVDDENDNNPVF--PIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLG----NSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIR---TIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSG---QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSN--------KILAYVQV--SDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEI------PLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENIN-NHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFV-DENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTI---TFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
V V D NDN+P F P +T E +G + A D D A + +Y LE+ G N DF + + G LI + KT + F +IA D ++T+ + D APK++ + T+ ENV ++ I + + N + K+ SG + +K + + G +V + LDYEQ+ +++ + A D + ++ST T +++ +VND+ P+ TG +IDE N K + V+ +D+D N++ ++ N E FR + F + DRE + + I+TV+ D P N + I+INDVNDN P F + Y G+++E+ H+V I A D D H N + YH+ + F + + +G I+ + DFE Y +++A+D H ++++ + + I+D NDNAPQF Q +A V +E+V+I ++ ++ATD D + K R + + + Q A ++ + +G I +DR+ + + F V++ + N L+ A + + VRD+ND+ P F
Sbjct: 967 VEVVDINDNSPQFERPSYETSVSRFEA---VGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPM---KTQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFEN--GNEWVEVVIMEGLDYEQV-NNYTLTLTATDM-TSRVASTKTFVVEVRDVNDVVPQFTV----DLFTG--TIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEAN--GEETKHFRIDELTGEIFP---NEKFDREKIDMY------ILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVI---TIKAHDLDKHSN--LRYHL--IGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGRH----NATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ--DEKSSRIVYRLEGQG-ADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDG--NGLVGYADVQVNVRDINDNSPIF 1546 HSP 3 Score: 114.775 bits (286), Expect = 2.575e-25 Identity = 151/566 (26.68%), Postives = 239/566 (42.23%), Query Frame = 3
Query: 597 ELPFKLGNSSDFELAKHFK--DGVPYLIITSTLDREKTSMYTFTLIAID-------GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINN-------LDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEEN---INNHEV-FMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFI--VVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS----------LPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
E+ +++ ++ E KHF+ + + DREK MY T+ A D G G N ++ I I D+NDNAP FE YI +KE+ + ++T + D + +L+ H ++ G++ VR + LD+E + ++A DG N+ T + I I +VND +P+ QQ I+E K+L V +DAD + S + R + FR + Y ++ + +DR+ P + S V DD N L A + + + D+NDN P F + ++ G IEEN I++ V FM+ D N + Y I K + FRID GKI+ +S D E S FI V A D+G P+R + + +++ D NDNAP F ++ + V+E IG + +A D D L E D F V +D ++ S + G +R + P+D E + F S +D EA + + + D ND P
Sbjct: 1254 EVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGP-NKDNVKVQIVINDVNDNAPSFEEQKYIGRVKES---EGEGHDVITIKAHDLDKHSNLRYH--------------LIGAGGGRIPFGVRTDSGTIFVKEPLDFEA-SDQYHLVLIASDGRHNA---TTNVYIHIEDVNDNAPQFE-----QQKYATTVIEEDVDIPKVLFNVHATDAD---QDEKSSRIVYRLEGQGADEVFR--IGKYSG-TIELVKALDRDP--PAGVPSWNFVVQAIDDDGNG--LVGYADVQVNVRDINDNSPIFPERLF-GYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSR-EGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDY-FYVTTDKDSKQSSV-------GVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHD--AEAAVHVALVDRNDHAP 1770 HSP 4 Score: 97.0561 bits (240), Expect = 6.445e-20 Identity = 133/514 (25.88%), Postives = 218/514 (42.41%), Query Frame = 3
Query: 501 TIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFK----DGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQL---YHSFEFKIVAQDGGRN-SLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLL-------TPRNILMIEES----RFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTN---ASIFIIINDVNDNPPKFTQNVYY---GQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQS--FDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS 1958
T+ E+ + Y + KAQ +F K + + L + + K F+ G+ +L T LD + ++ + + E NR + ++TI+I D+NDN P F RP+Y ++E++ ++ I ++ D+D +N RI + N F+++ S G++ A+VR LD +QL + + F + A+D G SLSS+A + I+ N ND S F+ Q F ++ ++ +Q DAD +++ S + N+ I+E + RH V+ EA P + V VQ D P T+ A++ I I DVN+N P+F Y +I E + + A D D NG + Y + + S + F ID Q G + S FD E V ATD+G L V + D NDN+PQF + + V +G + + A D D+
Sbjct: 538 TVSEDNLVDYSVVDVKAQSF--RSFEDGRSKGPITYSLEGDTPEDETKWFRIDPSTGIIHL--TRLLDFDDPALPKLHKLKVTAREDNRES-HVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHN-------FSIN----SNGEISAKVR----LDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDES--AVFLPTSQYTA--FVAEDAQGGTPVIQ-IQARDADR--DEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADL----------AEAENPI----NLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLY-YTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGD-RPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDA 1008 HSP 5 Score: 62.003 bits (149), Expect = 2.983e-9 Identity = 148/638 (23.20%), Postives = 254/638 (39.81%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCT--IEENKPLGYRIPLPKAQDLDNA-----TFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKF-ERPIYIRTIKENVIVD-PIFQILVTDEDEDE--------NGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGG------RNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSN--KILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQN---IDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAI--HAADKDLHLNGKVTYHIQ-----DFKNSSNAMYFR-IDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQS---HFAFFVDENVEIGHLIGQINA-TDRDSLPEHKDIRFIVKSDSQNRA-SKLITLDPLTG-----QIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ + +DD NDN P F P T + E+ PL I A D D T+SV ++ + +S+ E++ + L E+ +Y F + A D E + I I+ + ND + F Y + E+ P+ QI D D DE NGR KM+ +F+ +D+ G V+ + ++ D + + ++ QD G + +S ATL I I +VN+ PE I I EGT + V+ +D DS N + SL +S R I +Q + T DRE + VTV+ D + PL + + D+NDN P+F + Y E +++ E + I A D D N ++TY ++ ++ ++ +F ++ ++G+I + + + + F V+A D G P L SS+ + + + D+ AP++ S VDENVE+ +I + A + DS + N+A SK + ++ +D E+ + T + + + + + + V+ VRD+ND P F
Sbjct: 628 LTIRIDDVNDNVPTF---TRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHNFSI------NSNGEISAKVRLDADQL-------NERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMN---------LFS---IDEHTGLVKLR-HGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIA---KIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLY-------YTQSESRKAFVIDRQTGVLTPSPHVVFDRETR------PREDVTVKATDRGDR-PLIGFCQFSVEVVDINDNSPQFERPSY----ETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQK-FIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATD---MTSRVASTKTFVVEVRDVNDVVPQF 1211
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 126.716 bits (317), Expect = 4.978e-29 Identity = 153/609 (25.12%), Postives = 268/609 (44.01%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP--IFQILVTDEDEDE-NGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE--QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAY--VQVSDADSMINQ---LQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTN-ASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRID-----SQNGKIYNSQSFDFE----KESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
+++ ++D NDN P F Q ++E++ G+ + KA DLD + L + L + + + + + LD E + Y LIA DG R+ T + I I D+NDNAP+FE+ Y T+ E + P +F + TD D+DE + RI ++ G + + +I GK + + LD + S+ F + A D N L A +++ + ++ND SP +++ G + + + + + VQ D D + ++ ++ RN L+ ES FR N K F++R+ +DRE + + + I+ V+ +D +P A++ I + D+NDN P F + Y G +EE M+ + AD++ N TY + + S+ Y D S G + Q D+E ++ + I V+ R + + + V + D+ND+AP V E+V G IG+ ATDRD+ RF + S + I D G +R + +DRE + +E+ + S + I M+ + ++D+ND+ P
Sbjct: 1321 VQIVINDVNDNAPSFE-EQKYIGRVKESEGEGHDVITIKAHDLDKHS--------NLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDG----RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRI----------GKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFP-----ERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIV--RNKLINGESVFRIDQNTGKIFAMRS---LDREISS----EREFIIEVRAND--RGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDN-VFTYQLSE---ESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSD-----GRHDAEAAVHVALVDRNDHAPHI-HGATEHRVREDVPRGTSIGRYTATDRDA---GDTARFRINRQSDPKRQFTIDQD---GTLRVAHTLDREDIAVYNLIIEAYDNS----NNIGRQMVAVYLQDVNDNGP 1870 HSP 2 Score: 115.931 bits (289), Expect = 1.040e-25 Identity = 160/623 (25.68%), Postives = 276/623 (44.30%), Query Frame = 3
Query: 438 VFVDDENDNNPVF--PIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLG----NSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIR---TIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSG---QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSN--------KILAYVQV--SDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEI------PLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENIN-NHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFV-DENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTI---TFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
V V D NDN+P F P +T E +G + A D D A + +Y LE+ G N DF + + G LI + KT + F +IA D ++T+ + D APK++ + T+ ENV ++ I + + N + K+ SG + +K + + G +V + LDYEQ+ +++ + A D + ++ST T +++ +VND+ P+ TG +IDE N K + V+ +D+D N++ ++ N E FR + F + DRE + + I+TV+ D P N + I+INDVNDN P F + Y G+++E+ H+V I A D D H N + YH+ + F + + +G I+ + DFE Y +++A+D H ++++ + + I+D NDNAPQF Q +A V +E+V+I ++ ++ATD D + K R + + + Q A ++ + +G I +DR+ + + F V++ + N L+ A + + VRD+ND+ P F
Sbjct: 967 VEVVDINDNSPQFERPSYETSVSRFEA---VGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPM---KTQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFEN--GNEWVEVVIMEGLDYEQV-NNYTLTLTATDM-TSRVASTKTFVVEVRDVNDVVPQFTV----DLFTG--TIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEAN--GEETKHFRIDELTGEIFP---NEKFDREKIDMY------ILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVI---TIKAHDLDKHSN--LRYHL--IGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGRH----NATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ--DEKSSRIVYRLEGQG-ADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDG--NGLVGYADVQVNVRDINDNSPIF 1546 HSP 3 Score: 114.775 bits (286), Expect = 2.575e-25 Identity = 151/566 (26.68%), Postives = 239/566 (42.23%), Query Frame = 3
Query: 597 ELPFKLGNSSDFELAKHFK--DGVPYLIITSTLDREKTSMYTFTLIAID-------GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINN-------LDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEEN---INNHEV-FMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFI--VVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS----------LPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
E+ +++ ++ E KHF+ + + DREK MY T+ A D G G N ++ I I D+NDNAP FE YI +KE+ + ++T + D + +L+ H ++ G++ VR + LD+E + ++A DG N+ T + I I +VND +P+ QQ I+E K+L V +DAD + S + R + FR + Y ++ + +DR+ P + S V DD N L A + + + D+NDN P F + ++ G IEEN I++ V FM+ D N + Y I K + FRID GKI+ +S D E S FI V A D+G P+R + + +++ D NDNAP F ++ + V+E IG + +A D D L E D F V +D ++ S + G +R + P+D E + F S +D EA + + + D ND P
Sbjct: 1254 EVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGP-NKDNVKVQIVINDVNDNAPSFEEQKYIGRVKES---EGEGHDVITIKAHDLDKHSNLRYH--------------LIGAGGGRIPFGVRTDSGTIFVKEPLDFEA-SDQYHLVLIASDGRHNA---TTNVYIHIEDVNDNAPQFE-----QQKYATTVIEEDVDIPKVLFNVHATDAD---QDEKSSRIVYRLEGQGADEVFR--IGKYSG-TIELVKALDRDP--PAGVPSWNFVVQAIDDDGNG--LVGYADVQVNVRDINDNSPIFPERLF-GYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSR-EGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDY-FYVTTDKDSKQSSV-------GVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHD--AEAAVHVALVDRNDHAP 1770 HSP 4 Score: 97.0561 bits (240), Expect = 6.445e-20 Identity = 133/514 (25.88%), Postives = 218/514 (42.41%), Query Frame = 3
Query: 501 TIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFK----DGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQL---YHSFEFKIVAQDGGRN-SLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLL-------TPRNILMIEES----RFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTN---ASIFIIINDVNDNPPKFTQNVYY---GQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQS--FDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS 1958
T+ E+ + Y + KAQ +F K + + L + + K F+ G+ +L T LD + ++ + + E NR + ++TI+I D+NDN P F RP+Y ++E++ ++ I ++ D+D +N RI + N F+++ S G++ A+VR LD +QL + + F + A+D G SLSS+A + I+ N ND S F+ Q F ++ ++ +Q DAD +++ S + N+ I+E + RH V+ EA P + V VQ D P T+ A++ I I DVN+N P+F Y +I E + + A D D NG + Y + + S + F ID Q G + S FD E V ATD+G L V + D NDN+PQF + + V +G + + A D D+
Sbjct: 538 TVSEDNLVDYSVVDVKAQSF--RSFEDGRSKGPITYSLEGDTPEDETKWFRIDPSTGIIHL--TRLLDFDDPALPKLHKLKVTAREDNRES-HVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHN-------FSIN----SNGEISAKVR----LDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDES--AVFLPTSQYTA--FVAEDAQGGTPVIQ-IQARDADR--DEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADL----------AEAENPI----NLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLY-YTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGD-RPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDA 1008 HSP 5 Score: 62.003 bits (149), Expect = 2.983e-9 Identity = 148/638 (23.20%), Postives = 254/638 (39.81%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCT--IEENKPLGYRIPLPKAQDLDNA-----TFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKF-ERPIYIRTIKENVIVD-PIFQILVTDEDEDE--------NGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGG------RNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSN--KILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQN---IDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAI--HAADKDLHLNGKVTYHIQ-----DFKNSSNAMYFR-IDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQS---HFAFFVDENVEIGHLIGQINA-TDRDSLPEHKDIRFIVKSDSQNRA-SKLITLDPLTG-----QIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ + +DD NDN P F P T + E+ PL I A D D T+SV ++ + +S+ E++ + L E+ +Y F + A D E + I I+ + ND + F Y + E+ P+ QI D D DE NGR KM+ +F+ +D+ G V+ + ++ D + + ++ QD G + +S ATL I I +VN+ PE I I EGT + V+ +D DS N + SL +S R I +Q + T DRE + VTV+ D + PL + + D+NDN P+F + Y E +++ E + I A D D N ++TY ++ ++ ++ +F ++ ++G+I + + + + F V+A D G P L SS+ + + + D+ AP++ S VDENVE+ +I + A + DS + N+A SK + ++ +D E+ + T + + + + + + V+ VRD+ND P F
Sbjct: 628 LTIRIDDVNDNVPTF---TRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHNFSI------NSNGEISAKVRLDADQL-------NERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMN---------LFS---IDEHTGLVKLR-HGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIA---KIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLY-------YTQSESRKAFVIDRQTGVLTPSPHVVFDRETR------PREDVTVKATDRGDR-PLIGFCQFSVEVVDINDNSPQFERPSY----ETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQK-FIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATD---MTSRVASTKTFVVEVRDVNDVVPQF 1211
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0078045) HSP 1 Score: 186.037 bits (471), Expect = 4.054e-47 Identity = 181/600 (30.17%), Postives = 277/600 (46.17%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSD-FELAKHF-KDGVPYL--IITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE--QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLD--PLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ V V DENDN P FP + EN P + L A+DLD ++ Y + GN +D F L+ H +DGV YL I+ LDRE T Y+ + A+DG G + I I+D+NDN P F + Y T+ EN V + Q+ +D D DENG ++ + N Q ++F +D +I +A LD+E +L+ E +VA+D G L +TA + I++ +VND P I + + I E + +A + V D DS ++ L + F + + +DRE I S ++V D PL+ + SIF+ I DVNDNPP+F Q++Y+ + E + + H D+D LN +TY + + + +A +F+ID Q G I D E E + VVA D G P LSS++T++V I D NDN P F QS + V EN +G I +++A+D D + +V L + +G+I +D E+ S+ F V + + L AMI + + D+ND+ P F
Sbjct: 160 VLVTVKDENDNAPTFPQTSM-HIEFPENTPREVKRTLLPARDLDLEPYNTQRYNI----VSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLR-GFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAI-NRRQSDKEQMFRIDPRTGAIYINKA-------LDFETKELH---ELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASP--KISESAQPGEFVARISVHDPDSKTEYANVNV-----TLNGGDGHFALTTRDNSIYLVIVHLPLDRE------IVSNYTLSVVATDKGTP-PLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAH--DRDEGLNSALTYSLAETPET-HAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPP-LSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDC-----GVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATD----RGGLSTTAMIKMQLTDVNDNRPVF 715 HSP 2 Score: 141.739 bits (356), Expect = 1.685e-33 Identity = 167/673 (24.81%), Postives = 289/673 (42.94%), Query Frame = 3
Query: 249 NGLFILDSDS-NLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKV--QAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFR-HPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFT--QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATD------RDSLPEH-KDIR--FIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDP 2219
+G F ++++S N++++K +D E Q++L + G H + + V+D NDN P F ++ E+ LG + A D D+ + +Y L + S A + G +LI++ LD E + +T + A DG + +T T I + ++D+NDN P FE+ Y + E+ ++ I Q+ +D D N RI ++ ++G + + + + Q G + LD E ++ ++A D G + + + +++L+ ND P+ Q+ F I+E ++ V SD D N L P N S F+ HPV + T + +DRE E L D + V+ D + + + I ++DVNDN P+ Q EE EV + A D+D N +TY I ++S F ID +G I D E+ SIY V A+D G+P R + + V + D NDN P F+ S F V E+ +GH++G I+ + R+S+ E +D+R + + +++ +D +G + +DRE S + + + + N + I V D+ND+ P + +DP
Sbjct: 872 DGYFSIETNSGNIRIAKPLDHE--AKSQVLLNIQATLGEPPVYGHTQ---------------VNIEVEDVNDNAPEFEASMV-RISVPESAELGAPLYAAHAHDKDSGSSGQVTYSL-----VKESGKGLFAIDARSG--HLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLT-ILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRET-RDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKF------QKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPIN------SSFQVHPVT----GEISTREPLDRELRE--LYD----LVVEARDQGTPV-RSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVR---VRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPR-ETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWP-QDP 1489 HSP 3 Score: 132.109 bits (331), Expect = 1.449e-30 Identity = 161/644 (25.00%), Postives = 276/644 (42.86%), Query Frame = 3
Query: 429 FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRI----PLPKAQDLDNATFSVSSYKLELPFKLGN------SSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIR--DINDNAPKFER-PIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKM------HNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNS-----LSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNA---AIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSS----------------------TIIVRIKDQNDNAPQF-SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
+RV V D NDN P F + + E+ LG+ + P+ + D+ + S L + + L + F++ +H + L++ LDRE S + + A+D N N + IT+KI D+NDNAP++ + PI ++ + + I TD D NG + ++ N QE +F +D L ++ +QA LD+E + E+ ++ Q ++S L ++ T+R++IL+ ND +P + T I + T +++A++ D DS N +T N E RFR I Q + A E + + + D+ P ++ ++ +I+ ++NPP+F Q VY I EN+ + + ++H A+ N ++Y I +N + F +D Q G I FD E ++ Y V D + LSSS+ TI + + D NDN+P+F S + V EN E G +I + A+D D P I I + N+ ++D +G++ R P+DRE+ S T +++ + + I I V D ND+ P F+L
Sbjct: 1350 MLRVEVLDLNDNRPTF-TSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGN----LVVARLLDREVQSEFRLEIRALDTTASN-NPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGAL-SLQAP------LDFEAVQ---EYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGN----GEGRFR----INSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAE-----NANLSYEIP--AGVANDL-FHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPG-VIHTVVASDLDEGPNADLIYSITGGNLGNK----FSIDSSSGELSAR-PLDREQHSRYTLQIQASDRGQP-KSRQGHCNITIFVEDQNDNAPRFKL 1954 HSP 4 Score: 116.701 bits (291), Expect = 7.570e-26 Identity = 161/626 (25.72%), Postives = 267/626 (42.65%), Query Frame = 3
Query: 429 FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLP----KAQDLDNATFSVSSYKLELPFKLGNSSD-FELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGN-RNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQ-SIGKVQAQVRAINNLDYE---QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIR--FVRNGQQITGGFSIDEGTLSNKILAYVQVSDADS-MINQLQCSLL--TPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEEN--INNHEVFMNAAIHAADKDLHLNGKVTYHIQD---------FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSK 2225
I++ + D NDN PVF + E K P A D D F SY++ GN + F + + G +++ L M+ + A DG GN R+ + + I D P FE+ Y +KE++ + ++ +G + H S + I++ D SI +R LD+E Q+ + + + G + + I++ +VND +PE VR S+ E L D DS Q+ SL+ + + + I+ +R H L +Q++D E+++ +IVT D +P L+TN +I + + DVNDNPP F ++ Y + E+ IN + +NA+ D D N ++TY I D +S + +F I +G IY D E Y V+ATD G P + + +IVR+ D NDN P+F +S + F ++EN+ G ++G + A+D D L E+ IR+ + + + + P+TG+I TR P+DRE VE+++ + I V D+ND+ P + DP +
Sbjct: 700 MIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRI----VAGNEAGIFRIDR--STGEIFVVRPDMLSVRTQPMHMLNISATDG--GNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIA-----ASGDV---AHRSPVRY--SIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATL-----GEPPVYGHTQVNIEVEDVNDNAPEFEASMVR--------ISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAID-ARSGH---------LILSQHLDYESSQ----RHTLIVTAT----DGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNAS----DLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTP-AAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLLPINSS-----FQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRS--ARVPVRIHVSDVNDNAP--EIADPQE 1261 HSP 5 Score: 115.931 bits (289), Expect = 1.528e-25 Identity = 168/693 (24.24%), Postives = 291/693 (41.99%), Query Frame = 3
Query: 267 DSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQ---------ISCNNEEM---QSNFIRVFVDDENDNNPVFPIV-----QTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITS-TLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP---IFQILVTDEDEDENGRIDLKMHNSGQ---EWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANE-PFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNA---AIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIY--NSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVES--KNPSRIFNDLIQEAMIVITVRDLNDSPPTF-----RLKDPSKSQL 2234
D+D N V I+R + + M +++ G+I+ LDF+ ++ ++ E + F+ + V D NDN P ++ +P I E+ G + D D+ T ++ + L N D A +D YL+I LDRE S YT +++A D + K+ I ++I D+NDN P+FE+ +Y + E + DP + Q+L D DE N + + + + +W +D G + R+ + + E + + +VA+DGG LSSTAT+ + I +VND P Q S+ E + + V SD D +N + N + E F+H +F +R+ A E F S V D L+T A I + + DVNDN P F Y + E+ + A+ A D D G+V+Y I + A FRID G+I+ + ++ + ATD G+ R ++ + + + I D P F ++ + ++V E++ G ++G + A D + +R+ + S + +++ +G IR P+D E S + +++ P + + I V D+ND+ P F R+ P ++L
Sbjct: 314 DADENGLVEYAINRRQ-SDKEQMFRIDPRTGAIY-INKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASP--KISESAQPGEFVARISVHDPDSKT-EYANVNVTL-----NGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKS-IFLRITDVNDNPPEFEQDLYHANVME--VADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQ-------IDPQTGLIT--TRSHIDCETEPVP---QLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIF------DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMV-------NYTIGEG--FKH----LTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGG---LSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRI---VAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGN-LRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGD-VAHRSPVRYSIYSGDPD---GYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPP-----VYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAEL 946 HSP 6 Score: 108.997 bits (271), Expect = 1.807e-23 Identity = 173/696 (24.86%), Postives = 288/696 (41.38%), Query Frame = 3
Query: 306 REELCPPQMMLQLNKVCGSIHT-------CCHILDFQISCNNEEMQSNF----IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLD---NATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-----------IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQD--GGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP--LNTNASIFIIINDVNDNPPKF-TQNVYYGQ-----IEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSF-----DFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSR---IFNDLIQE------------------AMIVITVRDLNDSPPTFR 2207
R L P Q++ V G I T + D + ++ +R+ V D NDN P Q ++ E +P G + +A D D NA+ + S K G SD + LD E+ S+Y + A DG R T + + +++ D+NDN P F + ++E+ I P + + E+ E+ R+ ++ ++ I F DI S V A++ LD E + F +I A D N SS T++I++ +VND +PE Q + E T I+ +DAD+ N LQ L+ R + ES+ +++++ SL T + +A F + ++ VQ D + + L T+ ++ + I D ND+ P F + N G+ I + EV A I A D+D NG++TY I + FRI+SQ G I +S D EK ++ I+ A D G P SS + + ++ ++N P+F Q+ + + ENV G + Q+ A E+ ++ + + + N L +D G I TR DRE ++ V ++ +R + + +++ A I ITV D+ND+ P FR
Sbjct: 1189 RYSLLPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVK-------GRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRM-LRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAF--DIDRHSGNLVVARL-----LDRE-VQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEW------PQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLI--RYFPQLNESQ-EQAMSLFRMDSL--TGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVV--AHIVAVDEDSGDNGQLTYEI---TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGA-ENANLSYEIPAGVAN---DLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFR 1848 HSP 7 Score: 98.9821 bits (245), Expect = 2.234e-20 Identity = 139/566 (24.56%), Postives = 245/566 (43.29%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKL--ELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKF---ERPIY------IRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVND-MSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYY-GQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKES-IYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREK 2084
IRV + D NDN P FP T+ E LG I A D+D T+ +Y+L E + N S F L ++ L++ LD E Y +IA D + +T +T+++ D NDNAP F + P Y I I E++ VD + + TD D + N + + QE + + ++ ++ ++Q V + + + +I+A+D G+ +L S+ LR+Q ND S +F++N Q S + L + +L Q D++ L I EES F + + ++ + +DRE N+ + + ++ + + ++ S+ I I D NDN P F ++ Y +I E AD++ N +V Y D + ++ F ID G ++ + D++ + Y I+ A D H L S + + D+NDN P+F + + F+ EN +G + + +A+D D P + I + S + K+ +D +G + + + D E+
Sbjct: 2414 IRVQIVDVNDNQPTFP--PNNLVTVSEATELGAVITSISANDVD--TYPALTYRLGAESTVDIENMSIFALDRYSGK----LVLKRRLDYELQQEYELDVIASDAA----HEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGD---------YFVRIIAKDAGKPALKSSTLLRVQ---ANDNGSGRSQFLQN--QYRAQIS-EAAPLGSVVLQLGQ----DALDQSLAI-------IAGNEESAFE----LLQSKAIVLVKPLDRERNDLYKL-RLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVY---DITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQ 2933 HSP 8 Score: 93.9745 bits (232), Expect = 6.904e-19 Identity = 82/251 (32.67%), Postives = 122/251 (48.61%), Query Frame = 3
Query: 1476 LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQ-NGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVR--DLNDSPPTFRLKDP 2219
L + A + I + D NDN PKF+Q + + E NN F+ A +HA D D N ++ YHI D N NA F I+ +G + + D E IY ++ATD+G P +++ ++TI V+I D NDN P F ++ V E E+G +I I+A D D+ P R +S + LD +G++ + +D E V I +D EA V+TVR D ND+ P F + P
Sbjct: 2302 LASYAELVIELEDENDNSPKFSQKQFVATVSEG-NNKGTFV-AQVHAFDSDAGSNARLRYHIVD-GNHDNA--FVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVP-QMTGTATIRVQIVDVNDNQPTFPPNNL-VTVSEATELGAVITSISANDVDTYPALT-YRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDV-------IASDAAHEARTVLTVRVNDENDNAPVFLAQQP 2537 HSP 9 Score: 92.4337 bits (228), Expect = 2.088e-18 Identity = 149/572 (26.05%), Postives = 230/572 (40.21%), Query Frame = 3
Query: 606 FKLGNSSDFELAKHFKDGVPYLIITST--------------------LDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEW------INKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFR-----HPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPK----FTQNVYYGQIEENINNHEVFMNAAIHAAD-KDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIY---NSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+++G DF G PY+I+ LDRE + Y+ I + G RN + + ++D NDNAP F + EN + + + L+ D +DL+ +N+ Q + +N F L + G + ++ LD E + I A DGG L T+ I I +VND P R + + T+ +L V SD D+ N L + R +E FR + I K T +E +E +V V D E PL T A + I + DVNDN P F + +I E+ E ++H D K + N VT + D +F + +++ IY D E S Y+ VVATD+G P L +S +I +RI D NDN P+F Q + V E + G + Q+ A DRD + + + + + A + +DP TG I TR ID E V +++ L A +++T+ D+ND+ P F
Sbjct: 94 YQIGYIGDF---GGIDSGPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRETRASYSLVAIPLSG----RNI---RVLVTVKDENDNAPTFPQTSMHIEFPENTPRE-VKRTLLPARD------LDLEPYNT-QRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETT-PGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP-----ENATVGTSVLQ-VYASDTDADENGLVEYAINRRQ--SDKEQMFRIDPRTGAIYINKALDFET-----KELHE--------LVVVAKDH--GEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGD-------GHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPP-LHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDE-GLNSALTYSLAETPETHA-QWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGG--VPPLSSTATVLVTIHDVNDNEPIF 611 HSP 10 Score: 92.0485 bits (227), Expect = 2.878e-18 Identity = 139/552 (25.18%), Postives = 241/552 (43.66%), Query Frame = 3
Query: 510 ENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGK----TEITIKIRDINDNAPKFERP--IYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGR-NSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTT-QNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIIN--DVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP--QFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYP--IDREKTSTITFFVESKN 2120
EN L Y IP A DL + + F + + + L + +D ++S+ R++ S + G+ + G+ I I + D+NDN+P+F RP Y ++ EN I ++ +D DE N DL +G NK +D S G++ A+ LD EQ + + +I A D G+ S + I + + ND +P + + TG S+ E + + DAD +N +L SL E++++ ++ Q L TT +DRE L S + + D E+ +A++ + IN D+NDN P F + Y GQ+ I + + + A D DL N ++ Y + + +NS+ + FRI+ G + SQS E + VVA D+G+P + SS I + I + P +F + + EN G + Q+ A D + ++F + +++ +++LD L+G+IR P +D ++ ST + S+
Sbjct: 1750 ENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSI---------GDTSNGQHFDVATIYITVGDVNDNSPEF-RPGSCYGLSVPENSEPGVIHTVVASDLDEGPNA--DLIYSITGGNLGNKFS----IDSSSGELSAR-----PLDREQ-HSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKL----SKYTG--SVQEDAPLGTSVVQISAVDADLGVNARLVYSLAN--------ETQWQFAID--GQSGLITTVGKLDRE-----LQASYNFMVLATDGGRYEV---RSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLK--VQALDADLGANAEIVYSL-NAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQ-SSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSDG--RRQKVQFSFGAGNED---GILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRG 2246 HSP 11 Score: 88.9669 bits (219), Expect = 2.261e-17 Identity = 73/240 (30.42%), Postives = 121/240 (50.42%), Query Frame = 3
Query: 1488 ASIFIIINDVNDNPPKFTQNVYYG-QIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
A+I+I + DVNDN P+F YG + EN E + + A+D D N + Y I N N F IDS +G++ +++ D E+ S Y+ + A+D+G P I + ++DQNDNAP+F S + V E+ +G + QI+A D D L + + + + +++Q + +D +G I T +DRE ++ F V + + R + + I V D+ND+ P F
Sbjct: 1831 ATIYITVGDVNDNSPEFRPGSCYGLSVPEN---SEPGVIHTVVASDLDEGPNADLIYSITG-GNLGNK--FSIDSSSGEL-SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDAD-LGVNARLVYSLANETQWQ----FAIDGQSGLITTVGKLDRELQASYNFMVLATDGGR-YEVRSATVPVQINVLDINDNRPIF 2057 HSP 12 Score: 78.1814 bits (191), Expect = 5.161e-14 Identity = 74/260 (28.46%), Postives = 116/260 (44.62%), Query Frame = 3
Query: 399 SCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNAT-----FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSL-SSTATLRIQILNVNDMSP 1157
+ N + I + V D NDN+P F ++ EN G I A DLD +S++ L F + +SS EL+ LDRE+ S YT + A D + G ITI + D NDNAP+F+ Y +++E+ + + QI D D N R+ + N Q W I L ++GK+ +++A S+ F ++A DGGR + S+T ++I +L++ND P
Sbjct: 1822 TSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGNKFSI-DSSSGELSAR------------PLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQ-WQFAIDGQSGLITTVGKLDRELQA-----------SYNFMVLATDGGRYEVRSATVPVQINVLDINDNRP 2055 HSP 13 Score: 74.3294 bits (181), Expect = 5.914e-13 Identity = 52/178 (29.21%), Postives = 93/178 (52.25%), Query Frame = 3
Query: 1449 CDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDF-KNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEI--GHLIGQINATDRDSLPEHK 1973
CD + ++ PL + + ++D NDN PKF Y + EN A HA+D D G++ Y I + S+ FR+DS++G + ++ FD+E+ Y ++A+D G +S + V I+ +++ PQF++ + F + V + G+++GQ+ ATD DS P+ +
Sbjct: 2834 CDSH-HQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRA--HASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKK---ASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGR 3005 HSP 14 Score: 73.1738 bits (178), Expect = 1.375e-12 Identity = 77/308 (25.00%), Postives = 129/308 (41.88%), Query Frame = 3
Query: 258 FILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIIT-STLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP---IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRF 1169
F +DS S ++ +DRE+ + +Q + H CN I +FV+D+NDN P F + + +++E+ PLG + A D D V++ L + L N + ++ A DG LI T LDRE + Y F ++A DG + + I + DINDN P FER YI + ++ P + ++ D D N I + N+ ++ F ++ ++ Q+ L ++VA+D G SS + + I +P +RF
Sbjct: 1895 FSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGH-------CN--------ITIFVEDQNDNAPRFKLSKY-TGSVQEDAPLGTSVVQISAVDAD---LGVNA---RLVYSLANETQWQFAI---DGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVP--ALIQPGQTLLKVQALDADLGANAEIVYSL-NAENSAVSAKFRINPSTGALSASQSLASESGKL--------LHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRF 2166 HSP 15 Score: 60.8474 bits (146), Expect = 8.219e-9 Identity = 115/510 (22.55%), Postives = 202/510 (39.61%), Query Frame = 3
Query: 768 TEITIKIRDINDNAPKFERPIYIRTIKE-NVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLID---SKIIVTVQCD-DYDNEIPLNTNAS---------IFIIINDVNDNPPKFTQN---VYYG------QIEENINNHEVFMNAAIHAADKDLHL-NGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSF---DFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTS----TITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
E+ I++ D NDN+PKF + ++ T+ E N + Q+ D D N R+ + + + F ++ I VR LD E + ++ KI+A D G ++ TAT+R+QI++VND P F N ++ E T ++ + +D D+ +P Y+ L +D E F +D K+++ + D + E L+ AS + + +ND NDN P F Y+ +I E+++ F ++A D D N KV Y I+ + F + NG + + S Y ++A D G P L SS+ + V+ D QF Q+ + + E +G ++ Q+ +D+L D + + ++ A +L+ + I P+DRE+ + P + ++IT+ D ND+ P F
Sbjct: 2306 AELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHD---NAFVIEPAFSGI------VRTNIVLDRE-IRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPT--FPPNNL-----VTVSEATELGAVITSISANDVDT------------------------YPALTYR---LGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVD--FDLLTVNATDADSEGNNSKVIYIIEPAQEG-----FSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKP-ALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLG---QDAL----DQSLAIIAGNEESAFELLQ----SKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIF 2752 HSP 16 Score: 58.9214 bits (141), Expect = 2.911e-8 Identity = 134/532 (25.19%), Postives = 212/532 (39.85%), Query Frame = 3
Query: 444 VDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSD-FELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEG-NRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDI--LDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFS-------IDEGTLSNKILAYVQVSDADSMIN-----------QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSF-IVVATDQGHP----NRLSSSSTIIVRIKDQNDNAPQFSQS-HFAFFVDENVEIGHLIGQINATDRD 1955
++DENDN+P F Q T+ E G + A D D S+ +L GN + F + F V I+ LDRE +Y +IA D EG + TG I ++I D+NDN P F P + T+ E + + ++ D D + ++ G E I + I LD+ GK+ + R LDYE L +E ++A D + + L +++ + ND +P V QQ F+ I E + L V +DADS N Q S+ ++ + SR + V+ + +R I ++A +P L S ++ VQ ND +F QN Y QI E V + A D+ L + I + S+ + Q+ I + D E+ +Y +V++ G P SS ++I+ I D NDN P F +S + + E + + I Q+ A D D
Sbjct: 2312 LEDENDNSPKFSQKQF-VATVSEGNNKGTFVAQVHAFDSDAG----SNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIV---LDREIRDIYKLKIIATD--EGVPQMTGTATIRVQIVDVNDNQPTFP-PNNLVTVSEATELGAVI-TSISANDVDTYPALTYRL---GAESTVDIENMSIFALDRYSGKLVLKRR----LDYE-LQQEYELDVIASDAAHEART---VLTVRVNDENDNAP----VFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRI---IAKDAGKPAL-KSSTLLRVQA-------------------NDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAI-------IAGNEESAFELL-----QSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDAD 2781 HSP 17 Score: 52.373 bits (124), Expect = 3.407e-6 Identity = 40/158 (25.32%), Postives = 72/158 (45.57%), Query Frame = 3
Query: 1809 LSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESI 2282
L+S + +++ ++D+NDN+P+FSQ F V E G + Q++A D D+ + IV + N + +G +RT +DRE + + + + A I + + D+ND+ PTF + L+ E + G + SI
Sbjct: 2302 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDN---AFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEG--VPQMTGTATIRVQIVDVNDNQPTF-----PPNNLVTVSEATELGAVITSI 2449
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0343249) HSP 1 Score: 186.037 bits (471), Expect = 4.054e-47 Identity = 181/600 (30.17%), Postives = 277/600 (46.17%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSD-FELAKHF-KDGVPYL--IITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE--QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLD--PLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ V V DENDN P FP + EN P + L A+DLD ++ Y + GN +D F L+ H +DGV YL I+ LDRE T Y+ + A+DG G + I I+D+NDN P F + Y T+ EN V + Q+ +D D DENG ++ + N Q ++F +D +I +A LD+E +L+ E +VA+D G L +TA + I++ +VND P I + + I E + +A + V D DS ++ L + F + + +DRE I S ++V D PL+ + SIF+ I DVNDNPP+F Q++Y+ + E + + H D+D LN +TY + + + +A +F+ID Q G I D E E + VVA D G P LSS++T++V I D NDN P F QS + V EN +G I +++A+D D + +V L + +G+I +D E+ S+ F V + + L AMI + + D+ND+ P F
Sbjct: 160 VLVTVKDENDNAPTFPQTSM-HIEFPENTPREVKRTLLPARDLDLEPYNTQRYNI----VSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLR-GFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAI-NRRQSDKEQMFRIDPRTGAIYINKA-------LDFETKELH---ELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASP--KISESAQPGEFVARISVHDPDSKTEYANVNV-----TLNGGDGHFALTTRDNSIYLVIVHLPLDRE------IVSNYTLSVVATDKGTP-PLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAH--DRDEGLNSALTYSLAETPET-HAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPP-LSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDC-----GVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATD----RGGLSTTAMIKMQLTDVNDNRPVF 715 HSP 2 Score: 141.739 bits (356), Expect = 1.685e-33 Identity = 167/673 (24.81%), Postives = 289/673 (42.94%), Query Frame = 3
Query: 249 NGLFILDSDS-NLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKV--QAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFR-HPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFT--QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATD------RDSLPEH-KDIR--FIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDP 2219
+G F ++++S N++++K +D E Q++L + G H + + V+D NDN P F ++ E+ LG + A D D+ + +Y L + S A + G +LI++ LD E + +T + A DG + +T T I + ++D+NDN P FE+ Y + E+ ++ I Q+ +D D N RI ++ ++G + + + + Q G + LD E ++ ++A D G + + + +++L+ ND P+ Q+ F I+E ++ V SD D N L P N S F+ HPV + T + +DRE E L D + V+ D + + + I ++DVNDN P+ Q EE EV + A D+D N +TY I ++S F ID +G I D E+ SIY V A+D G+P R + + V + D NDN P F+ S F V E+ +GH++G I+ + R+S+ E +D+R + + +++ +D +G + +DRE S + + + + N + I V D+ND+ P + +DP
Sbjct: 872 DGYFSIETNSGNIRIAKPLDHE--AKSQVLLNIQATLGEPPVYGHTQ---------------VNIEVEDVNDNAPEFEASMV-RISVPESAELGAPLYAAHAHDKDSGSSGQVTYSL-----VKESGKGLFAIDARSG--HLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLT-ILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRET-RDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKF------QKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPIN------SSFQVHPVT----GEISTREPLDRELRE--LYD----LVVEARDQGTPV-RSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVR---VRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPR-ETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWP-QDP 1489 HSP 3 Score: 132.109 bits (331), Expect = 1.449e-30 Identity = 161/644 (25.00%), Postives = 276/644 (42.86%), Query Frame = 3
Query: 429 FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRI----PLPKAQDLDNATFSVSSYKLELPFKLGN------SSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIR--DINDNAPKFER-PIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKM------HNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNS-----LSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNA---AIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSS----------------------TIIVRIKDQNDNAPQF-SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
+RV V D NDN P F + + E+ LG+ + P+ + D+ + S L + + L + F++ +H + L++ LDRE S + + A+D N N + IT+KI D+NDNAP++ + PI ++ + + I TD D NG + ++ N QE +F +D L ++ +QA LD+E + E+ ++ Q ++S L ++ T+R++IL+ ND +P + T I + T +++A++ D DS N +T N E RFR I Q + A E + + + D+ P ++ ++ +I+ ++NPP+F Q VY I EN+ + + ++H A+ N ++Y I +N + F +D Q G I FD E ++ Y V D + LSSS+ TI + + D NDN+P+F S + V EN E G +I + A+D D P I I + N+ ++D +G++ R P+DRE+ S T +++ + + I I V D ND+ P F+L
Sbjct: 1350 MLRVEVLDLNDNRPTF-TSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGN----LVVARLLDREVQSEFRLEIRALDTTASN-NPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGAL-SLQAP------LDFEAVQ---EYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGN----GEGRFR----INSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAE-----NANLSYEIP--AGVANDL-FHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPG-VIHTVVASDLDEGPNADLIYSITGGNLGNK----FSIDSSSGELSAR-PLDREQHSRYTLQIQASDRGQP-KSRQGHCNITIFVEDQNDNAPRFKL 1954 HSP 4 Score: 116.701 bits (291), Expect = 7.570e-26 Identity = 161/626 (25.72%), Postives = 267/626 (42.65%), Query Frame = 3
Query: 429 FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLP----KAQDLDNATFSVSSYKLELPFKLGNSSD-FELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGN-RNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQ-SIGKVQAQVRAINNLDYE---QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIR--FVRNGQQITGGFSIDEGTLSNKILAYVQVSDADS-MINQLQCSLL--TPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEEN--INNHEVFMNAAIHAADKDLHLNGKVTYHIQD---------FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSK 2225
I++ + D NDN PVF + E K P A D D F SY++ GN + F + + G +++ L M+ + A DG GN R+ + + I D P FE+ Y +KE++ + ++ +G + H S + I++ D SI +R LD+E Q+ + + + G + + I++ +VND +PE VR S+ E L D DS Q+ SL+ + + + I+ +R H L +Q++D E+++ +IVT D +P L+TN +I + + DVNDNPP F ++ Y + E+ IN + +NA+ D D N ++TY I D +S + +F I +G IY D E Y V+ATD G P + + +IVR+ D NDN P+F +S + F ++EN+ G ++G + A+D D L E+ IR+ + + + + P+TG+I TR P+DRE VE+++ + I V D+ND+ P + DP +
Sbjct: 700 MIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRI----VAGNEAGIFRIDR--STGEIFVVRPDMLSVRTQPMHMLNISATDG--GNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIA-----ASGDV---AHRSPVRY--SIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATL-----GEPPVYGHTQVNIEVEDVNDNAPEFEASMVR--------ISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAID-ARSGH---------LILSQHLDYESSQ----RHTLIVTAT----DGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNAS----DLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTP-AAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLLPINSS-----FQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRS--ARVPVRIHVSDVNDNAP--EIADPQE 1261 HSP 5 Score: 115.931 bits (289), Expect = 1.528e-25 Identity = 168/693 (24.24%), Postives = 291/693 (41.99%), Query Frame = 3
Query: 267 DSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQ---------ISCNNEEM---QSNFIRVFVDDENDNNPVFPIV-----QTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITS-TLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP---IFQILVTDEDEDENGRIDLKMHNSGQ---EWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANE-PFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNA---AIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIY--NSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVES--KNPSRIFNDLIQEAMIVITVRDLNDSPPTF-----RLKDPSKSQL 2234
D+D N V I+R + + M +++ G+I+ LDF+ ++ ++ E + F+ + V D NDN P ++ +P I E+ G + D D+ T ++ + L N D A +D YL+I LDRE S YT +++A D + K+ I ++I D+NDN P+FE+ +Y + E + DP + Q+L D DE N + + + + +W +D G + R+ + + E + + +VA+DGG LSSTAT+ + I +VND P Q S+ E + + V SD D +N + N + E F+H +F +R+ A E F S V D L+T A I + + DVNDN P F Y + E+ + A+ A D D G+V+Y I + A FRID G+I+ + ++ + ATD G+ R ++ + + + I D P F ++ + ++V E++ G ++G + A D + +R+ + S + +++ +G IR P+D E S + +++ P + + I V D+ND+ P F R+ P ++L
Sbjct: 314 DADENGLVEYAINRRQ-SDKEQMFRIDPRTGAIY-INKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASP--KISESAQPGEFVARISVHDPDSKT-EYANVNVTL-----NGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKS-IFLRITDVNDNPPEFEQDLYHANVME--VADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQ-------IDPQTGLIT--TRSHIDCETEPVP---QLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIF------DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMV-------NYTIGEG--FKH----LTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGG---LSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRI---VAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGN-LRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGD-VAHRSPVRYSIYSGDPD---GYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPP-----VYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAEL 946 HSP 6 Score: 108.997 bits (271), Expect = 1.807e-23 Identity = 173/696 (24.86%), Postives = 288/696 (41.38%), Query Frame = 3
Query: 306 REELCPPQMMLQLNKVCGSIHT-------CCHILDFQISCNNEEMQSNF----IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLD---NATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-----------IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQD--GGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP--LNTNASIFIIINDVNDNPPKF-TQNVYYGQ-----IEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSF-----DFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSR---IFNDLIQE------------------AMIVITVRDLNDSPPTFR 2207
R L P Q++ V G I T + D + ++ +R+ V D NDN P Q ++ E +P G + +A D D NA+ + S K G SD + LD E+ S+Y + A DG R T + + +++ D+NDN P F + ++E+ I P + + E+ E+ R+ ++ ++ I F DI S V A++ LD E + F +I A D N SS T++I++ +VND +PE Q + E T I+ +DAD+ N LQ L+ R + ES+ +++++ SL T + +A F + ++ VQ D + + L T+ ++ + I D ND+ P F + N G+ I + EV A I A D+D NG++TY I + FRI+SQ G I +S D EK ++ I+ A D G P SS + + ++ ++N P+F Q+ + + ENV G + Q+ A E+ ++ + + + N L +D G I TR DRE ++ V ++ +R + + +++ A I ITV D+ND+ P FR
Sbjct: 1189 RYSLLPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVK-------GRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRM-LRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAF--DIDRHSGNLVVARL-----LDRE-VQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEW------PQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLI--RYFPQLNESQ-EQAMSLFRMDSL--TGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVV--AHIVAVDEDSGDNGQLTYEI---TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGA-ENANLSYEIPAGVAN---DLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFR 1848 HSP 7 Score: 98.9821 bits (245), Expect = 2.234e-20 Identity = 139/566 (24.56%), Postives = 245/566 (43.29%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKL--ELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKF---ERPIY------IRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVND-MSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYY-GQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKES-IYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREK 2084
IRV + D NDN P FP T+ E LG I A D+D T+ +Y+L E + N S F L ++ L++ LD E Y +IA D + +T +T+++ D NDNAP F + P Y I I E++ VD + + TD D + N + + QE + + ++ ++ ++Q V + + + +I+A+D G+ +L S+ LR+Q ND S +F++N Q S + L + +L Q D++ L I EES F + + ++ + +DRE N+ + + ++ + + ++ S+ I I D NDN P F ++ Y +I E AD++ N +V Y D + ++ F ID G ++ + D++ + Y I+ A D H L S + + D+NDN P+F + + F+ EN +G + + +A+D D P + I + S + K+ +D +G + + + D E+
Sbjct: 2414 IRVQIVDVNDNQPTFP--PNNLVTVSEATELGAVITSISANDVD--TYPALTYRLGAESTVDIENMSIFALDRYSGK----LVLKRRLDYELQQEYELDVIASDAA----HEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGD---------YFVRIIAKDAGKPALKSSTLLRVQ---ANDNGSGRSQFLQN--QYRAQIS-EAAPLGSVVLQLGQ----DALDQSLAI-------IAGNEESAFE----LLQSKAIVLVKPLDRERNDLYKL-RLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVY---DITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQ 2933 HSP 8 Score: 93.9745 bits (232), Expect = 6.904e-19 Identity = 82/251 (32.67%), Postives = 122/251 (48.61%), Query Frame = 3
Query: 1476 LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQ-NGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVR--DLNDSPPTFRLKDP 2219
L + A + I + D NDN PKF+Q + + E NN F+ A +HA D D N ++ YHI D N NA F I+ +G + + D E IY ++ATD+G P +++ ++TI V+I D NDN P F ++ V E E+G +I I+A D D+ P R +S + LD +G++ + +D E V I +D EA V+TVR D ND+ P F + P
Sbjct: 2302 LASYAELVIELEDENDNSPKFSQKQFVATVSEG-NNKGTFV-AQVHAFDSDAGSNARLRYHIVD-GNHDNA--FVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVP-QMTGTATIRVQIVDVNDNQPTFPPNNL-VTVSEATELGAVITSISANDVDTYPALT-YRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDV-------IASDAAHEARTVLTVRVNDENDNAPVFLAQQP 2537 HSP 9 Score: 92.4337 bits (228), Expect = 2.088e-18 Identity = 149/572 (26.05%), Postives = 230/572 (40.21%), Query Frame = 3
Query: 606 FKLGNSSDFELAKHFKDGVPYLIITST--------------------LDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEW------INKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFR-----HPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPK----FTQNVYYGQIEENINNHEVFMNAAIHAAD-KDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIY---NSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+++G DF G PY+I+ LDRE + Y+ I + G RN + + ++D NDNAP F + EN + + + L+ D +DL+ +N+ Q + +N F L + G + ++ LD E + I A DGG L T+ I I +VND P R + + T+ +L V SD D+ N L + R +E FR + I K T +E +E +V V D E PL T A + I + DVNDN P F + +I E+ E ++H D K + N VT + D +F + +++ IY D E S Y+ VVATD+G P L +S +I +RI D NDN P+F Q + V E + G + Q+ A DRD + + + + + A + +DP TG I TR ID E V +++ L A +++T+ D+ND+ P F
Sbjct: 94 YQIGYIGDF---GGIDSGPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRETRASYSLVAIPLSG----RNI---RVLVTVKDENDNAPTFPQTSMHIEFPENTPRE-VKRTLLPARD------LDLEPYNT-QRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETT-PGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP-----ENATVGTSVLQ-VYASDTDADENGLVEYAINRRQ--SDKEQMFRIDPRTGAIYINKALDFET-----KELHE--------LVVVAKDH--GEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGD-------GHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPP-LHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDE-GLNSALTYSLAETPETHA-QWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGG--VPPLSSTATVLVTIHDVNDNEPIF 611 HSP 10 Score: 92.0485 bits (227), Expect = 2.878e-18 Identity = 139/552 (25.18%), Postives = 241/552 (43.66%), Query Frame = 3
Query: 510 ENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGK----TEITIKIRDINDNAPKFERP--IYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGR-NSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTT-QNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIIN--DVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP--QFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYP--IDREKTSTITFFVESKN 2120
EN L Y IP A DL + + F + + + L + +D ++S+ R++ S + G+ + G+ I I + D+NDN+P+F RP Y ++ EN I ++ +D DE N DL +G NK +D S G++ A+ LD EQ + + +I A D G+ S + I + + ND +P + + TG S+ E + + DAD +N +L SL E++++ ++ Q L TT +DRE L S + + D E+ +A++ + IN D+NDN P F + Y GQ+ I + + + A D DL N ++ Y + + +NS+ + FRI+ G + SQS E + VVA D+G+P + SS I + I + P +F + + EN G + Q+ A D + ++F + +++ +++LD L+G+IR P +D ++ ST + S+
Sbjct: 1750 ENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSI---------GDTSNGQHFDVATIYITVGDVNDNSPEF-RPGSCYGLSVPENSEPGVIHTVVASDLDEGPNA--DLIYSITGGNLGNKFS----IDSSSGELSAR-----PLDREQ-HSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKL----SKYTG--SVQEDAPLGTSVVQISAVDADLGVNARLVYSLAN--------ETQWQFAID--GQSGLITTVGKLDRE-----LQASYNFMVLATDGGRYEV---RSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLK--VQALDADLGANAEIVYSL-NAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQ-SSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSDG--RRQKVQFSFGAGNED---GILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRG 2246 HSP 11 Score: 88.9669 bits (219), Expect = 2.261e-17 Identity = 73/240 (30.42%), Postives = 121/240 (50.42%), Query Frame = 3
Query: 1488 ASIFIIINDVNDNPPKFTQNVYYG-QIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
A+I+I + DVNDN P+F YG + EN E + + A+D D N + Y I N N F IDS +G++ +++ D E+ S Y+ + A+D+G P I + ++DQNDNAP+F S + V E+ +G + QI+A D D L + + + + +++Q + +D +G I T +DRE ++ F V + + R + + I V D+ND+ P F
Sbjct: 1831 ATIYITVGDVNDNSPEFRPGSCYGLSVPEN---SEPGVIHTVVASDLDEGPNADLIYSITG-GNLGNK--FSIDSSSGEL-SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDAD-LGVNARLVYSLANETQWQ----FAIDGQSGLITTVGKLDRELQASYNFMVLATDGGR-YEVRSATVPVQINVLDINDNRPIF 2057 HSP 12 Score: 78.1814 bits (191), Expect = 5.161e-14 Identity = 74/260 (28.46%), Postives = 116/260 (44.62%), Query Frame = 3
Query: 399 SCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNAT-----FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSL-SSTATLRIQILNVNDMSP 1157
+ N + I + V D NDN+P F ++ EN G I A DLD +S++ L F + +SS EL+ LDRE+ S YT + A D + G ITI + D NDNAP+F+ Y +++E+ + + QI D D N R+ + N Q W I L ++GK+ +++A S+ F ++A DGGR + S+T ++I +L++ND P
Sbjct: 1822 TSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGNKFSI-DSSSGELSAR------------PLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQ-WQFAIDGQSGLITTVGKLDRELQA-----------SYNFMVLATDGGRYEVRSATVPVQINVLDINDNRP 2055 HSP 13 Score: 74.3294 bits (181), Expect = 5.914e-13 Identity = 52/178 (29.21%), Postives = 93/178 (52.25%), Query Frame = 3
Query: 1449 CDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDF-KNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEI--GHLIGQINATDRDSLPEHK 1973
CD + ++ PL + + ++D NDN PKF Y + EN A HA+D D G++ Y I + S+ FR+DS++G + ++ FD+E+ Y ++A+D G +S + V I+ +++ PQF++ + F + V + G+++GQ+ ATD DS P+ +
Sbjct: 2834 CDSH-HQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRA--HASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKK---ASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGR 3005 HSP 14 Score: 73.1738 bits (178), Expect = 1.375e-12 Identity = 77/308 (25.00%), Postives = 129/308 (41.88%), Query Frame = 3
Query: 258 FILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIIT-STLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP---IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRF 1169
F +DS S ++ +DRE+ + +Q + H CN I +FV+D+NDN P F + + +++E+ PLG + A D D V++ L + L N + ++ A DG LI T LDRE + Y F ++A DG + + I + DINDN P FER YI + ++ P + ++ D D N I + N+ ++ F ++ ++ Q+ L ++VA+D G SS + + I +P +RF
Sbjct: 1895 FSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGH-------CN--------ITIFVEDQNDNAPRFKLSKY-TGSVQEDAPLGTSVVQISAVDAD---LGVNA---RLVYSLANETQWQFAI---DGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVP--ALIQPGQTLLKVQALDADLGANAEIVYSL-NAENSAVSAKFRINPSTGALSASQSLASESGKL--------LHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRF 2166 HSP 15 Score: 60.8474 bits (146), Expect = 8.219e-9 Identity = 115/510 (22.55%), Postives = 202/510 (39.61%), Query Frame = 3
Query: 768 TEITIKIRDINDNAPKFERPIYIRTIKE-NVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLID---SKIIVTVQCD-DYDNEIPLNTNAS---------IFIIINDVNDNPPKFTQN---VYYG------QIEENINNHEVFMNAAIHAADKDLHL-NGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSF---DFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTS----TITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
E+ I++ D NDN+PKF + ++ T+ E N + Q+ D D N R+ + + + F ++ I VR LD E + ++ KI+A D G ++ TAT+R+QI++VND P F N ++ E T ++ + +D D+ +P Y+ L +D E F +D K+++ + D + E L+ AS + + +ND NDN P F Y+ +I E+++ F ++A D D N KV Y I+ + F + NG + + S Y ++A D G P L SS+ + V+ D QF Q+ + + E +G ++ Q+ +D+L D + + ++ A +L+ + I P+DRE+ + P + ++IT+ D ND+ P F
Sbjct: 2306 AELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHD---NAFVIEPAFSGI------VRTNIVLDRE-IRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPT--FPPNNL-----VTVSEATELGAVITSISANDVDT------------------------YPALTYR---LGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVD--FDLLTVNATDADSEGNNSKVIYIIEPAQEG-----FSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKP-ALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLG---QDAL----DQSLAIIAGNEESAFELLQ----SKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIF 2752 HSP 16 Score: 58.9214 bits (141), Expect = 2.911e-8 Identity = 134/532 (25.19%), Postives = 212/532 (39.85%), Query Frame = 3
Query: 444 VDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSD-FELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEG-NRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDI--LDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFS-------IDEGTLSNKILAYVQVSDADSMIN-----------QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSF-IVVATDQGHP----NRLSSSSTIIVRIKDQNDNAPQFSQS-HFAFFVDENVEIGHLIGQINATDRD 1955
++DENDN+P F Q T+ E G + A D D S+ +L GN + F + F V I+ LDRE +Y +IA D EG + TG I ++I D+NDN P F P + T+ E + + ++ D D + ++ G E I + I LD+ GK+ + R LDYE L +E ++A D + + L +++ + ND +P V QQ F+ I E + L V +DADS N Q S+ ++ + SR + V+ + +R I ++A +P L S ++ VQ ND +F QN Y QI E V + A D+ L + I + S+ + Q+ I + D E+ +Y +V++ G P SS ++I+ I D NDN P F +S + + E + + I Q+ A D D
Sbjct: 2312 LEDENDNSPKFSQKQF-VATVSEGNNKGTFVAQVHAFDSDAG----SNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIV---LDREIRDIYKLKIIATD--EGVPQMTGTATIRVQIVDVNDNQPTFP-PNNLVTVSEATELGAVI-TSISANDVDTYPALTYRL---GAESTVDIENMSIFALDRYSGKLVLKRR----LDYE-LQQEYELDVIASDAAHEART---VLTVRVNDENDNAP----VFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRI---IAKDAGKPAL-KSSTLLRVQA-------------------NDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAI-------IAGNEESAFELL-----QSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDAD 2781 HSP 17 Score: 52.373 bits (124), Expect = 3.407e-6 Identity = 40/158 (25.32%), Postives = 72/158 (45.57%), Query Frame = 3
Query: 1809 LSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESI 2282
L+S + +++ ++D+NDN+P+FSQ F V E G + Q++A D D+ + IV + N + +G +RT +DRE + + + + A I + + D+ND+ PTF + L+ E + G + SI
Sbjct: 2302 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDN---AFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEG--VPQMTGTATIRVQIVDVNDNQPTF-----PPNNLVTVSEATELGAVITSI 2449
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Fly
Match: ft (gene:FBgn0001075 transcript:FBtr0077478) HSP 1 Score: 154.451 bits (389), Expect = 2.581e-37 Identity = 160/600 (26.67%), Postives = 273/600 (45.50%), Query Frame = 3
Query: 423 SNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKI--IVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQ-DFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTST-ITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ +RV V D NDN+PVF + Q+ + T+ EN P G + P+A D D +L F L H + +TLDRE+TS+Y TL+A D +TI + D+NDN PKF+ Y + E + +F D D+ EN + + Q + + ++ + +++ + ++ ++L Y I A D G SLSS A L + IL ++ P ++ N F++ E K++ V S +P+ L + + R+ I SLR N + +D ++ + + + D + P L + I + + D NDN P Q +Y ++ E + ++ A + A+D+D NG V Y +Q DF + F I +++G+IY D E+ Y+F+V A DQG P+ ++ ++++++ + D+NDN P+F++ F+ V EN EIG + ++ ++D D L + + + S S+N K ++P +G I +DRE+ I V S R E I IT++D ND+ P F
Sbjct: 2474 TGIVRVEVQDINDNDPVFEL-QSYHATVRENLPSGTHVLTPRATDKDEG------LNAKLRFNLLGEHMHRF--HIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKL-ELKTKTKSHDDLTY-------TIVISAMDQGEQSLSSKAELTV-ILRPPELFPTFAYMANSH-----FAMSEDVRPGKMITKV--------------SATSPKKGL-VGKIRYAIAGGIMGD-SLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLI--AVVKASDRDSGDNGNVIYRLQNDFDGT-----FEI-TESGEIYTRMRLDREEIGDYAFVVEAVDQGVPH-MTGTASVLLHLLDKNDNPPKFTR-LFSLNVTENAEIGSFVIRVTSSDLD-LGANANASY---SFSENPGEKF-RIEPQSGNITVAGHLDREQQDEYILKVVASDGAWR------AETPITITIQDQNDNAPEF 3013 HSP 2 Score: 148.673 bits (374), Expect = 1.454e-35 Identity = 162/629 (25.76%), Postives = 283/629 (44.99%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYC-TIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDD--------------------------------YDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNS----SNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+RV V D+ND+ P F + TP+ + E+ +G+ I +A D D + F L + D + G LI+ TLDRE S Y + DGV+ + TI++ D NDN P FE +Y I EN + QI+ D D +N ++ + + +W N +F+L+ G + R LDYE++ H + + AQD G+ SLS+T T+ +L++ND +P + ++ + ++ +++ V D DS N L +T ++ +S F I ++RT +N+DRE + + + C D + + L++ + I+I DVND P F + I EN+ + V + A+ A D D NG + Y +++ ++ S+ + F ++ +G++ + D E S Y + A D+G P + S+ S +++RI D+NDN+P F ++ V EN IG ++ Q++ATD D + IR+ + QN ++ TG +R ++ E+ S + V +++ + N A + I + D+ND+ PTF
Sbjct: 1809 VRVTVLDKNDSPPQF--LDTPFVYNVSEDLQIGHTISTLRAHDPDTLG--------SVTFLLMDGHDGKFLLEPSTG--KLILNDTLDRETKSKYELRIRVSDGVQYT----EAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVS---DWANDVFSLN---PQTGMLTLTAR----LDYEEVQH-YILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEV-----FENVPIATEVVT-VSAKDIDSGNNGLIEYSITAGDV----DSEF----GIDSNGTIRTRRNLDREHRSTYTL---TVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFI-SANETAIMENVAINTVVI--AVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQ-STESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGR-IRYSIVLGDQNHD---FSISEDTGVVRVAKNLNYERLSRYSLTVRAED-CALENPAGDTAELTINILDINDNRPTF 2384 HSP 3 Score: 141.739 bits (356), Expect = 2.145e-33 Identity = 178/683 (26.06%), Postives = 288/683 (42.17%), Query Frame = 3
Query: 315 LCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVD--DENDNNPVF-PIVQTPYCTIEENKPLGYRIPLPKAQDLDNAT-----FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVE-----------------------------------GNRNTGKTEITIKIRDINDNAPKFERPIYIR----TIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQ---FSLRTTQNIDREA-NEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDL-HLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
L P ML L +IL Q N + S I V+ + D NDN P+F P+ + + EN P+ + A+D+D+ +S+++ ++ F + ++ ++ LDRE S YT T+ A D + R + ++TI I+D+ND E P++I I ENV ++ + + D DE NG ID M + E + + D L S+ Q+R ++ LD E L S+ I A+D G S+ + L I+IL+ ND SP V + +Q + S+ E ++ V +D D N R R+ + + Q FS+ + R A N + S+ +TV+ +D E P A + I I D+NDN P F + Y ++ EN ++A D D LN +V Y F ++ FRI++ +G I + D E++S Y+ +VA D G P L+ + + V ++D NDN P F + V EN+ G + ATD+D K +RF + + +R +D TG+I T +DRE+TS + +++ S I + I+V D+ND+ P F
Sbjct: 1972 LNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYS--SEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEFGIDSNGTIRTRRN-------------LDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVND-----EVPVFISANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQS---DPLPFSLNPTDGQLRVVDALDRE-LRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSP----VFDPKQYSA--SVAENASIGAMVLQVSATDVDEGAN-----------------GRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRY----FLKEGDSDLFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPP-LTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAK-LRFNLLGEHMHR----FHIDSETGEISTATTLDREETSVYHLTLMAQD-SSITEPRASSVNLTISVSDVNDNIPKF 2596 HSP 4 Score: 139.428 bits (350), Expect = 1.058e-32 Identity = 159/606 (26.24%), Postives = 255/606 (42.08%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIE--ENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITST--LDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRA----INNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEI--RFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNIL---MIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFII-INDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+R+ V D NDN+P FP P I E+ G R+ L A D D V+ + + N + YL + +T LDRE Y + A DG R G ++ + I D+NDN P F+ Y ++ E + P+ ++ +D D +N +I + + ++ ++ G + R N+ S F + A+D G + + +L+ ND P I RF +G ++ ++DE ++ ++A V V D+DS +N + N L +EE+ H V R +DRE K +TV D P T + II +NDVND+ P F ++ Y + E + F+ A+I A D+D +N +V Y D + + +F +D G I + D E + A D G PN + + + V I D+ND APQFSQ + E+ ++ + ATD D + + F + + LD LTGQ+ TR P+DREK S V +++ A + + V D+ND+ P F
Sbjct: 142 VRIKVLDVNDNSPEFP---EPSIAISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPR-FGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYYLAETEHQFT--------VNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVA---TVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIV--------RVNGVLDREEI------GKYNLTVVA--MDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSE-LAPTGSFV-ASITATDEDTGVNAQVHY---DILSGNELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGG-PNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQ-GTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAP-TPQSATATVWLNVADVNDNDPQF 708 HSP 5 Score: 133.265 bits (334), Expect = 8.412e-31 Identity = 164/601 (27.29%), Postives = 255/601 (42.43%), Query Frame = 3
Query: 444 VDDENDNNPVFPIVQTPYCT-IEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWI-----NKIFTLDILD-QSIGKVQAQVRAIN---NLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ D ND+ PVF T Y T + E + R A D+D SY++ GN+ + F DG YL + + LDRE+ Y T+ D + +R++ + I + D NDNAP+F + +I EN D + ++ D D N + + + Q++ I TL D +++ KV A +L + + D G L +++ + +VND +PE F+R +T I EG + +V DAD +N L N E +F + Q SL + +DRE+ E I I+V D + PL++NASI I++ D NDN P+FTQ+ + E M A+D D +N +V + I F IDS G +Y + D+E + Y+ + A+D G P+ LS++ V + D NDN P F + + E + + I + A D DS K I K + Q + ++ TG I T IDRE T V + PS L E ++ + V D+ND+ P F
Sbjct: 1039 IADVNDHTPVFD--HTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEI----IEGNTE--RMFGVFPDG--YLFVRAPLDREERDYYALTVSCRDAGQPSRSS-VVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPE--FLRAPYHVT----ISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGN----EAGQFNLD-SATGQLSL--GRRLDRESQE---IHHLIVV---AKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMR--FRASDADQGVNSQVVFSISAGNRRDT---FHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPS-LSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDRESIDTFRLTVVATDRAQPSE--RQLSTEKLVTVIVEDINDNAPVF 1601 HSP 6 Score: 128.642 bits (322), Expect = 1.824e-29 Identity = 156/613 (25.45%), Postives = 264/613 (43.07%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQT--PYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLE----LPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDAD---------SMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKI--IVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN---PSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ + + D NDN PVF + + P ++ EN +G I L + +D D S SY L F++G + GV YL + E S+ L+A D ++ K +++ I D+ND+ P F+ Y ++ E V+ F + TD D +NGRI ++ E + +F L VRA LD E+ + + + +D G+ S SS + I +++ ND +P+ T FSI E ++ + + D D ++ +Q Q + RN + F ++ ++ ++N + + L S + ++ DN IP L + +I+ DVNDN P+F + Y+ I E + + + D D LNG V Y + + A F +DS G++ + D E + I+ IVVA D + LSS+++I + + D+NDNAP+F+QS V E G + + A+D D + +V S S +D +TG + P+D E ++ T + + + PS L + + V D ND+PP F
Sbjct: 928 VNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNPNQQFRIGPVT----------GVLYL--QRPIRAEPGSLIHVELMATDAGSPPLSS-KLSLSVLIADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFPDGYL---------FVRA--PLDREERDY-YALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQF------TNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFD------REALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITH--VFTQDADEGLNGDVYYSL---AKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQ----VVFSISAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPS-----LSTTVLYNVLVVDDNDNPPIF 1489 HSP 7 Score: 115.931 bits (289), Expect = 1.553e-25 Identity = 160/603 (26.53%), Postives = 262/603 (43.45%), Query Frame = 3
Query: 420 QSNFIRVF--VDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNS-SDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLY-HSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTN-ASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHL-NGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFR 2207
QS+ RV V EN + P F V + + EN+P+G I A D D + Y + GN DF + + ++I LD + Y I + + + + +TI + D+NDN P F Y I EN V +FQ D+D +N I SG + F I++QS G + + V + DYE+ ++ + K D +S+ S A L + +L VN+ P+ Q F + E + + VQ +D DS + LL + + FR N + R ++DRE +++++TV +Y + +T+ A + I I D ND PP+F ++ Y I E + A DKD+ N + +Y I N + F+ID Q G+I + D E+ S Y+ ++ A D G P + + S+T+ + ++D NDN P F+ ++ EN G I + A+D D LP + F + S L ++D +G +R+ DRE T + +E ++ + + ++ ITV D ND+P T R
Sbjct: 3209 QSDETRVVIVVTGENMDTPRFS-VNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSI----SGGNERQDFSVDERTGG----IVIQQQLDYDLIQEYHLN-ITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPD--RHFF---IMNQSNGTISSAV----SFDYEERRIYTLQIKAKNPD---SSMESYANLYVHVLGVNEFYPQFL------QPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSS----NDKGFRIDTNTGLIYVAR---HLDRETQ------NRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND-PPEFIKHYYTSTISEAAPVGTKV--TTVKAIDKDVRTQNNQFSYSI---INGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQ-TGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPD-LPRNGG-PFTYQLIGGKHKSWL-SVDRNSGVVRSTTSFDREMTPILEAIIEVEDSGKPKQK--SQHLLTITVLDQNDNPSTTR 3758 HSP 8 Score: 111.309 bits (277), Expect = 3.862e-24 Identity = 105/405 (25.93%), Postives = 182/405 (44.94%), Query Frame = 3
Query: 1026 NNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDRE--ANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQI---------RTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ LDYE L H +E I A DG SL S + + + + ND +P + +Q+ + E +++A V+ SD DS N N++ ++ F I + + T +DRE + F++++ D +P + AS+ + + D NDNPPKFT+ ++ + EN + + ++D DL N +Y + FRI+ Q+G I + D E++ Y VVA+D + + I + I+DQNDNAP+F S ++F E + L+GQI ATDRD + I + S + S + ++DP TG++ ++Y E +T +++ E ++ I + D +++PP F
Sbjct: 2766 DGLDYE-LTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVM------EQLIYNAEVLEEESPPQLIAVVKASDRDSGDNG---------NVIYRLQNDFDGTFEITESGEIYTRMRLDREEIGDYAFVVEA----------VDQGVPHMTGTASVLLHLLDKNDNPPKFTR-LFSLNVTENAEIGSFVIR--VTSSDLDLGANANASYSFSENPGEK----FRIEPQSGNITVAGHLDREQQDEYILKVVASD----GAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISY-----SLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYS----ECLVNINIVDAHNNPPKF 3124 HSP 9 Score: 105.531 bits (262), Expect = 2.369e-22 Identity = 151/624 (24.20%), Postives = 265/624 (42.47%), Query Frame = 3
Query: 429 FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSS-DFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFS-LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKES----IYSFIVVATDQGHPNRLSSSS--TIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRT-RYPIDREKTSTITFFVESKN---PSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQ 2261
IR+ DENDN+PVF Q ++ EN +G + A D+D ++ ++ LG+ + DF +++ GV + + L+ E+ S Y+ T+ A D N E+TI I DINDN P F Y+ + EN + +L + + + ++ ++ +E + +F I + + LD EQ + +VA D G L+ T +R+++ ++ND P Q ++ E S + + +D D +N +L+ +LL H +I + + T +DRE + + T+ D P ++ ++ I ++DVNDN PKF Y + E I+ E A A D D N V Y I + + YF I+++ G + + +S Y+ ++ A DQG LSS + T+I+R + + SHFA + E+V G +I +++AT P+ + I + + + +DP +G + + +D E T ++E+ + PS L +I + V D ND+ P QLI + E L++
Sbjct: 2265 LIRIL--DENDNSPVFDPKQYS-ASVAENASIGAMVLQVSATDVDEG----ANGRIRYSIVLGDQNHDFSISE--DTGV--VRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLF-------RINASSGDIALLKPLDREQ-QSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFEL----QSYHA--TVRENLPSGTHVLTPRATDKDEGLNAKLRFNLL----------GEHMHRFHIDSETGEISTATTLDREETSVYHL------TLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFGA--RALDLDDGENAVVHYTI----SGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGE-QSLSSKAELTVILRPPELFPTFAYMANSHFA--MSEDVRPGKMITKVSATS----PKKGLVGKIRYAIAGGIMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPS-----LRSVTLITLNVTDANDNAPVME-------QLIYNAEVLEE 2822 HSP 10 Score: 105.145 bits (261), Expect = 3.158e-22 Identity = 154/634 (24.29%), Postives = 265/634 (41.80%), Query Frame = 3
Query: 378 HILDFQISCNNEEMQS----NFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAID-GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKM---HNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMI--NQLQCSLLTPRNILMIEES----------RFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADK-DLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKD 2216
H+ + I + + S I + V D NDN PV + +EE P I + KA D D+ Y+L+ F FE+ + + + LDRE+ Y F + A+D GV TG + + + D NDN PKF R ++ + EN + F I VT D D + N G+++ I + +LD EQ + K+VA DG + + + I I + ND +PE + FS E S ++ + +D D + + SL P + I+ + RF+H Q+ +R+ +N+ +TV D + + PL + + I I D ++NPPKF Q Y + ++ + + +HA DK DL N ++ Y + F SS F + +G I + + Y +V ATD+G P + S + +++ + +N + P+FS + + V EN +G I + ATD D+ P +R+ + ++ + ++D TG I + +D + + ++ ++ L AM+ I + D+ND+PP F K+
Sbjct: 2774 HLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEESPPQL-IAVVKASDRDSGDNGNVIYRLQNDFD----GTFEITESGE-----IYTRMRLDREEIGDYAFVVEAVDQGVP--HMTGTASVLLHLLDKNDNPPKFTR-LFSLNVTENAEIGS-FVIRVTSSDLDLGANANASYSFSENPGEKF------------RIEPQSGNITVAGHLDREQ-QDEYILKVVASDG---AWRAETPITITIQDQNDNAPEF------EHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQQPSPMFSIDPATGEVFSKKAVRFKH-----SQY-VRSPENM-------------YALTVLATD-NGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVR--VHANDKQDLGTN-EMDYSLMTFNLSS---IFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQ-SDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGM-LRYSISGGNERQD---FSVDERTGGIVIQQQLDYDLIQEYHLNITVQDLG--YHPLSSVAMLTIILTDVNDNPPVFNHKE 3338 HSP 11 Score: 100.138 bits (248), Expect = 9.269e-21 Identity = 166/696 (23.85%), Postives = 288/696 (41.38%), Query Frame = 3
Query: 318 CPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTP----YCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKL----ELP-FKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSL-------RTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVY-YG--------QIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKI--YNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTII---VRIKDQNDNAPQFSQSHFAFFVDE----------NVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTS----TITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISL-ETLQQGQ 2267
CP Q + K S +C + + + + ++ V + D ND++P+ P T++EN G + +D D+ +S ++ EL F+L ++D + + + LDRE+ Y T++A+D R T + I + D+ND+ P FE+ Y + E + I TDED N ++ + SG E K F++D L + LD E + + E I A+DGG N + L++ IL+ ND +P+ F + Q +T G E I+A + +D D N L P +E +P+ QF+L T + +DRE S+ ++V D P + A++++ + DVNDN P+F Y Y ++++ + + ++ + A+DKD N + Y ++ S F++D+++G I + Y +V A D G R S I+ ++ K + Q + F + E N E+G I Q+ +T+ + H + I +QN +D +G+I T P+DRE+ + TI S + + + + ++ I + DLND+ P F L +S+ ISL E GQ
Sbjct: 333 CPQQTNV---KSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIVR----------VNGVLDREEIGKYNLTVVAMDQGTPARTT-TAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDIL-SGNEL--KWFSMDPL-------TGLIVTTGPLDRE-IRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQ--FSQREQNVTLG----EDAPPQTIVALMTATDHDQGTNGSVTFALAPS----VER---LYPL----QFALDALTGQLTTRRPLDREKM------SQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLH--VTASDKDDGDNALIEYRLE----SGGEGLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAGQ--RRSQQDAIVEIVLKSKLEMLECGQAQAGGYEFQMVEDHEQQRNSQPNREVG--IVQVKSTNGKA-NSHIEYDIIQGDRAQN-----FRIDTRSGRITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALD--RESEPTISLPENAAVGQ 962 HSP 12 Score: 98.9821 bits (245), Expect = 2.157e-20 Identity = 159/669 (23.77%), Postives = 264/669 (39.46%), Query Frame = 3
Query: 258 FILDSDSN-LKVSKQIDREELCP----PQMMLQLNKVCGSIHTCCHILDFQISCNN-EEMQSNF-IRVFVDDENDNNPVFPIVQTPY-CTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKF-ERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVND---MSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQ---NVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNA----PQFSQ-SHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
F +D+ + +K + DRE L + + + GS+ +L+ +S N +Q ++V V D NDN P F ++ PY TI E G I QD D Y L K + F L L + LDRE ++ ++A D + + ITI + D NDNAP+F + + ++ + + + +D D+ N ++ + + F +D + + LDYE + S+ I A D G SLS+T + +++ ND + P VR I EG + V D DS +N ++ + + + F +N + + T + IDRE+ + F ++ V +E L+T + +I+ D+NDN P F + + + + M +HA D D NG VTY I S F++ G I + F++E Y + +TD+ + SS I I + + PQF Q S + V EN IG I + A + E+ + + + S+ + +L +D G + T +DRE + VE + + +TV D NDSPP F
Sbjct: 1199 FTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEF--LRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLA---KGNEAGQFNL----DSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRR---DTFHID-------SITGSLYLHKPLDYEDIT-SYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQ---------IKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFG--INT-ETGVIHTLREIDRESIDTF----RLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQ--VHAKDADSSSNGLVTYEIV----SGPQELFKLQRNTGIITFTPGPQFKQEVRYQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTAHLASAEIEYF-VTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPE-EYEVEVYAIALGGQPRTSRTKVRVTVLDKNDSPPQF 1823 HSP 13 Score: 98.5969 bits (244), Expect = 2.664e-20 Identity = 130/515 (25.24%), Postives = 218/515 (42.33%), Query Frame = 3
Query: 771 EITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQI-LVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQ--NIDREANEPFLIDSK-IIVTVQCDDYDNEIPLNTNASIFIIIN--DVNDNPPK-----FTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAM-YFRIDSQNGK--IYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFR-------LKDPSKSQLIISLET 2252
E+ IK+ D+NDN+P+F P + E+ + TD D ENG D +G NK + + S + NLD E S++ I A+DGG + + IL+VND P F + + S++E L + V SD D N + + E+ + VN + + TT+ N ++ N K + TV D+ + + ++ +N D ND+ P F ++EN N V AA+ D D LNG+ + I S N + +FR++ + + D E+ Y+ VVA DQG P R ++++ +I+ + D ND+ P F +S ++ + E G + I ATD D+ + + + + S ++ K ++DPLTG I T P+DRE T+ + +++ N + + + D ND P F L + + Q I++L T
Sbjct: 141 EVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGN-VDNKFRLVTTANPSGDTSYLHLETTGNLDRES-RGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPP--IFDHSDYNV----SLNETALPGTPVVTVMASDNDLGDNS--------KITYYLAETEHQFTVNP-ETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSP---RQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVV--AAVAVKDSDSGLNGRTSVRIV----SGNELGHFRLEEAADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPAR-TTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDT-GVNAQVHYDILSGNE---LKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGGP--NPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMT 622 HSP 14 Score: 97.8265 bits (242), Expect = 5.416e-20 Identity = 128/570 (22.46%), Postives = 233/570 (40.88%), Query Frame = 3
Query: 450 DENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKE-NVIVDPIFQILVTDED-EDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKV--QAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDA-DSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREAN-----EPFLIDSKIIVTVQCDDYDNEIPLNTNAS-IFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQG-HPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNP 2123
D+NDN P F + + + EN +G + + DLD + +SY F F + + + + LDRE+ Y ++A DG +T ITI I+D NDNAP+FE Y + E + + QI+ TD D + N I + + +F++D + G+V + VR ++ + + ++A D G+ L S + I I++ ++ P+ +Q + + + + + V +D D N++ SL+T F+L + ++ R +P + + D +P ++ + + I++ N + P+F+ N Y + EN + + A D D NG + Y I + F +D + G I Q D++ Y + D G HP LSS + + + + D NDN P F+ + ++ EN +G + Q +A D+DS P++ I + +R ++ G I + D E+ T +++KNP
Sbjct: 2905 DKNDNPPKFTRLFS--LNVTENAEIGSFVIRVTSSDLDLGANANASYS----FSENPGEKFRIEPQSGN----ITVAGHLDREQQDEYILKVVASDGAW----RAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQQP-----SPMFSID---PATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKF------EQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMT---------------------FNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILT--VGATDDDTGPNGMLRYSISGGNERQD---FSVDERTGGIVIQQQLDYDLIQEYHLNITVQDLGYHP--LSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDS-PKNAIIHYAFLPSGPDR--HFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNP 3415 HSP 15 Score: 86.2705 bits (212), Expect = 1.619e-16 Identity = 158/680 (23.24%), Postives = 267/680 (39.26%), Query Frame = 3
Query: 252 GLFILDSDSN-LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEI-TIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWI-NKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNS---LSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLT--PRNILMIEES----------RFRHPVNIYKQFSLRTTQNI---DREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNA----MYFRIDSQNGKIYNSQSFDFEK-ESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQ--EAMIVITVRDLNDSPPTF 2204
G F LDS + L + +++DRE Q + L V L +S N I + V DENDN P F + ++ E P G + +A D D S ++ GN D H L + LD E + YT + A D G + T + + + D NDN P F +R IKE + + PI + D D NG++ + + + F I + + +D E + +F +VA D + S LS+ + + + ++ND +P + N + FS +G S+ + V DADS N L + P+ + ++ + +F+ V Q +L++T +R ++E ++ I+T ++ +P S K + +VY EN + H A + ++ Y + + + + F ID++ G + + D E Y V A G R +S + + V + D+ND+ PQF + F + V E+++IGH I + A D D+L + F++ + L+P TG++ +DRE S + +D +Q EA I V D ND+PP F
Sbjct: 1324 GQFNLDSATGQLSLGRRLDRES----QEIHHLIVVAKDA-----ALKHPLSSNAS------ITIVVLDENDNAPEF-TQSSSEVSVLETSPTGTELMRFRASDADQGVNS----QVVFSISAGNRRD---TFHIDSITGSLYLHKPLDYEDITSYTLNITASDC--GTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHF-------GINTETGVIHTLREIDRESI-DTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAP-VFVSMNAAILPPKFSTSKG--SSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFKQEVRY--QLTLKSTDEAVQSERRSSEVYIT----IITPGSGGSESSVPQFEQRS-------------KLSGSVY-----ENEPIGTSILTVTAHLA------SAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQPR-TSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTL---GSVTFLLMDGHDGK----FLLEPSTGKLILNDTLDRETKSKYELRIR-------VSDGVQYTEAYATIQVSDTNDNPPLF 1922 HSP 16 Score: 73.9442 bits (180), Expect = 8.973e-13 Identity = 132/537 (24.58%), Postives = 214/537 (39.85%), Query Frame = 3
Query: 687 LDREKTSMYTFTLIAIDGVEGNRNT-----GKTEITIKIRDINDNAPKF----ERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEK---------------------ESIYSFI-VVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
LDRE+ + Y T++A + G+ + I I D+NDNAP F E I + + I+ V D D N RI + N+ N+ F + + + +Q +RA + L H +++A D G LSS +L + I +VND +P + S+ E T N + +D D N R I E ++ L +DRE + + + TV C D + ++ + I + D NDN P+FT + + I EN + F+ + A D+D+ N ++++ + SS F ID++NG I + FD E Y + +D G P RL + V + D NDNAP+F ++ + + E G I + D D + D+ + S ++ + LD TGQ+ +DRE V +K+ + + + L A I I V D ND+ P F
Sbjct: 894 LDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNN----PNQQFRIGPV-TGVLYLQRPIRA----EPGSLIH---VELMATDAGSPPLSSKLSLSVLIADVNDHTPVF------DHTSYETSLPETTKVNTRFFALAATDIDLGDNG--------RISYEIIEGNTERMFGVFPDGYLFVRAPLDREERDYYAL------TVSCRDA-GQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENA-PADTFV-GKLTAVDRDIGRNAELSFTL-----SSQTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIP-RLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADE-GLNGDVYY---SLAKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKD-AALKHPLSSNASITIVVLDENDNAPEF 1384 HSP 17 Score: 73.1738 bits (178), Expect = 1.689e-12 Identity = 123/499 (24.65%), Postives = 203/499 (40.68%), Query Frame = 3
Query: 429 FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAID---GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGG--RNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDAD--SMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFS-LRTTQNIDREANEPF-LIDSKIIVTVQCDDYDNEIPLNTN-ASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGK-VTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFA 1889
+ + + D NDN PVF + +C I ENKP+G + A D D+ ++ Y LP G F + + + + D E+ +YT + A + +E N + + + +N+ P+F +P++ + E V + + TD+D E+GR+ + S + K F +D + +LD E + ++A++ G R + + A + I I + ND PE F+++ T I E + V+ D D + NQ S++ + I Q + T +DRE + L+ I D +P T A++ I + DVNDN P FT G I EN M + A+D DL NG TY + K+ S + +D +G + ++ SFD E I I+ D G P + S + + + DQNDN H A
Sbjct: 3319 MLTIILTDVNDNPPVFNHKEY-HCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAF-LPS--GPDRHFFIMNQSNGTISSAV---SFDYEERRIYTLQIKAKNPDSSMESYAN-----LYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSND---KGFRIDT-------NTGLIYVARHLDRET-QNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND-PPE--FIKHYYTST----ISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIIN---------GNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAI---------DTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMT--LIASDPDLPRNGGPFTYQLIGGKHKS---WLSVDRNSGVVRSTTSFDREMTPILEAIIEVEDSGKPKQ-KSQHLLTITVLDQNDNPSTTRSLHIA 3763 HSP 18 Score: 72.7886 bits (177), Expect = 1.807e-12 Identity = 68/280 (24.29%), Postives = 125/280 (44.64%), Query Frame = 3
Query: 1371 LRTTQNIDREAN-EPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENIN-NHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
L T +DREA E + ++ I P + + + + D ND+PP+F + + E++ H + + + A D D G VT+ + D + F ++ GK+ + + D E +S Y + +D + + +++ D NDN P F + ++F + EN + G+ +GQI A D D L ++ + + V SD N + +L+P TG + +D E+ V++++ + L + V DLND+ P F
Sbjct: 1774 LSTAAELDREAGPEEYEVEVYAIAL-------GGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTI---STLRAHDPDTL--GSVTFLLMDGHDGK----FLLEPSTGKLILNDTLDRETKSKYELRIRVSD----GVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDAD-LGQNAQLSYGVVSDWAN---DVFSLNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQ--PSLSTTITVYCNVLDLNDNAPIF 2027 HSP 19 Score: 67.3958 bits (163), Expect = 9.905e-11 Identity = 134/574 (23.34%), Postives = 221/574 (38.50%), Query Frame = 3
Query: 669 LIITSTLDREKT-SMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIR----------FVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQL--QCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENIN-NHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATD-----------------------------------QGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKS---DSQNRASKL-ITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKS 2228
L + LDRE Y + AI + G T +T++ + + D ND+ P+F ++ + E++ + L D D G + + + +L+ S GK+ +N+ + +E +I DG + + A IQ+ + ND P + G Q+ + D N L+Y VSD + + L Q +LT T +D E + +++ IV Q DN P L+T +++ + D+NDN P F Y ++ EN+ EV + A D D NG + Y I S F IDS NG I ++ D E S Y+ V A D RLSS+ + + IKD ND P F ++ + ENV I ++ + A D D + I +++K + ++ L +L+P GQ+R +DRE S+ + +++ R E+ ++I + D ND+ P F K S S
Sbjct: 1774 LSTAAELDREAGPEEYEVEVYAI-ALGGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRA-HDPDTLGSVTFLLMDGHDGKF-------LLEPSTGKL-----ILNDTLDRETKSKYELRIRVSDGVQ---YTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLT-------------------------LTARLDYEEVQHYIL----IVQAQ----DNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVV---TVSAKDIDSGNNGLIEYSITAGDVDSE---FGIDS-NGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANETAIM-ENVAINTVVIAVKAVDNDE-GRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARD--RGEPPQSTESQLLIRILDENDNSPVFDPKQYSAS 2286 HSP 20 Score: 50.8322 bits (120), Expect = 8.476e-6 Identity = 78/298 (26.17%), Postives = 122/298 (40.94%), Query Frame = 3
Query: 435 RVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNAT------FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAID-GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQE--WINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTL-SNKILAYVQVSDADSMINQLQCSL 1295
+V + ++ N+P I TI E P+G ++ KA D D T +S+ + L+ FK+ D + + + S LDRE+TS Y + AID G+ TG + I++ D+NDN P F I EN I ++ +D D NG G+ W+ S+ + VR+ + D E + E I +D G+ S L I +L+ ND R + S+ G L SN LA V+ +D D ++ +C L
Sbjct: 3531 QVIISIQDGNDPPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKI----DVQTGE--------ISTASRLDREETSTYNLVIGAIDTGLP--PQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWL-----------SVDRNSGVVRSTTSFDRE-MTPILEAIIEVEDSGKPKQKSQHLLTITVLDQNDNPSTTR------SLHIAVSLFNGDLPSNVKLADVRPNDID-IVGDYRCRL 3795
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304899) HSP 1 Score: 145.976 bits (367), Expect = 8.767e-35 Identity = 164/604 (27.15%), Postives = 263/604 (43.54%), Query Frame = 3
Query: 420 QSNFIRVFVD--DENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSD-FELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQD-GGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQF-SLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKT-STITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFR 2207
+SN ++ V+ D NDN P F Q ++ EN P+GY I +A D D E+ + + D F LA + G ++ LDRE+ + F ++A DG + + + + I ++D+NDN P F Y + E+ P+ + TD DED ++ N+ + I Q+ + + +LDY+Q F + A D GGR S TAT+ I I + N+ +P N F ++ + +L V +D+D +N Q+ SL N I P +I Q ++ T +DRE +L+ TV D N L+ + I + DVNDN P F +Y I E+ + A A+D D+ LNG++ Y + D + F ID +G I ++ D E +++ +A D+G P LSS+ + +R++D ND+ P F+ +V EN +G ++G+I+A D D I+ D N S + Q+ T +D E T V + +P L +A I I V D+ND+ P R
Sbjct: 669 RSNTTQLLVNVIDANDNAPRFYTSQFQE-SVLENVPVGYNIIRVQAYDSDEGA------NAEITYSISERDDNFPLAVDPRTG--WVQTIKPLDREEQGRFAFQVVAKDGGVPPK-SASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFA-------ITSQN---GRGLITIAQSLDYKQ-EKRFLLTVAATDSGGR---SDTATVHINITDANNFAP---IFENAPYSASVF--EDAPVGTTVLV-VSATDSDVGVNAQITYSL----NEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLL------TVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVA--ASDPDVGLNGRIKYLLSDRDIEDGS--FVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP-LSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRAASPP-----LRNDAHIEILVTDVNDNAPVLR 1221 HSP 2 Score: 139.428 bits (350), Expect = 8.544e-33 Identity = 164/613 (26.75%), Postives = 262/613 (42.74%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLE-LPFKLGNSSDFELAKHFKDGVPYLIIT-STLDREKTSMYTFTLIAID--GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIV----DPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAY----VQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNI-YKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNT-NASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGK--IYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQN--RASKLITLDPLTGQIRTRYPIDREKTSTITFFVESK---NPSRIFNDLIQEAMIVITVRDLNDSPPTFR 2207
++V V D ND++P F Q +I E +G + +A D D + Y +E + G + D E+ D +I T S+LDRE + Y + A D + R T + +K+ D NDN P+F Y + E+ + + I TD D+ N I + + F++D + V + LDYE + S+ I AQDGG S S+T L + +++ ND +P RF + Q E L N + Y VQ D+D N I E P+ + + ++T + +DRE F Q D +P + ++S+ I + DVNDN P F Y + E+ D+D L+ ++T + F I SQNG+ I +QS D+++E + V ATD G S ++T+ + I D N+ AP F + ++ V E+ +G + ++ATD D + + I + + +S N + +++P TG I T P+DRE TS V +K NPS L + I V D+ND+ P F+
Sbjct: 450 LQVNVLDCNDHSPTFEAEQFE-ASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQ---SQFSID-------SMSGDVSLVKPLDYESV-RSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAP--RFYTSQFQ--------ESVLENVPVGYNIIRVQAYDSDEGANA--------EITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRF--------AFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEIT-------TGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG---RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPS-----LSDTTDVEIGVTDVNDNAPAFK 1008 HSP 3 Score: 125.561 bits (314), Expect = 1.775e-28 Identity = 130/492 (26.42%), Postives = 225/492 (45.73%), Query Frame = 3
Query: 768 TEITIKIR-DINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDED-ENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAIN---NLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNI-YKQFSLRTTQNIDREANEPF--LIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQI-EENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLK 2213
T+I ++R ++ + +P FE+ +Y+ ++ E P + T D E+ + M + LD QS+ KV ++ + +LD E L F++VA D S T TL++ +L+ ND SP +Q SI EG + ++ +D D N +++ + + + + + I + + T ++DRE ++ + L+ + + + Q + AS+ + + D NDN P+F++ Y Q+ E+ E A I A D D N + Y I S F IDS +G + + D+E Y ++ A D G P+R S+++ ++V + D NDNAP+F S F V ENV +G+ I ++ A D D + I S S+ + + +DP TG ++T P+DRE+ F V +K+ + +VITV+D+ND+ P F K
Sbjct: 342 TDIARRVRRELRNQSPYFEQALYVASVLEE---QPAGAAVTTVRARDPEDSPVVYSM----------VSLLDSRSQSLFKVDSRTGVVTTSASLDRE-LMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTF----EAEQFEA--SIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERR------TATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQ---FSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR-SNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAE----ITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGG--VPPKSASSSVVITVQDVNDNDPAFNPK 797 HSP 4 Score: 99.3673 bits (246), Expect = 1.706e-20 Identity = 118/517 (22.82%), Postives = 225/517 (43.52%), Query Frame = 3
Query: 486 QTPY-------CTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMH------NSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQD---GGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPV---NIYKQFSLRTTQNIDREANEPFLIDS----KIIVTVQCDDYDNEIPLNTNASIFII-INDVNDNPPKFTQNVYYGQIEENI-NNHEVFMN-AAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRD 1955
Q+PY ++ E +P G + +A+D +++ S L L + S + GV + +++LDRE ++ F ++A D R +G T + + + D ND++P FE + +I+E V + + TD+D +N I+ + Q+ IF +D I + R ++ S+ + A D ++TA++++++L+ ND P+ Q+ G + +A+++ +DAD N + R+ + N QFS+ + D +P +S ++++ Q D P +N + ++ + D NDN P+F Y Q +E++ N V N + A D D N ++TY I + ++ +D + G + + D E++ ++F VVA D G P + S+SS++++ ++D NDN P F+ ++ V E+ G + + ATD D
Sbjct: 355 QSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSL-----LDSRSQSLFKVDSRTGV--VTTSASLDRELMDVHYFRVVATDDSFPPR-SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSD--------SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVP---EDQWGGTEDNTVAHIRATDADQGNN-----------------AAIRYAIIGGNTQSQFSIDSMSG-DVSLVKPLDYESVRSYRLVIRAQ----DGGSPSRSNTTQLLVNVIDANDNAPRF----YTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPK-SASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD 822
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0300578) HSP 1 Score: 145.976 bits (367), Expect = 8.767e-35 Identity = 164/604 (27.15%), Postives = 263/604 (43.54%), Query Frame = 3
Query: 420 QSNFIRVFVD--DENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSD-FELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQD-GGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQF-SLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKT-STITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFR 2207
+SN ++ V+ D NDN P F Q ++ EN P+GY I +A D D E+ + + D F LA + G ++ LDRE+ + F ++A DG + + + + I ++D+NDN P F Y + E+ P+ + TD DED ++ N+ + I Q+ + + +LDY+Q F + A D GGR S TAT+ I I + N+ +P N F ++ + +L V +D+D +N Q+ SL N I P +I Q ++ T +DRE +L+ TV D N L+ + I + DVNDN P F +Y I E+ + A A+D D+ LNG++ Y + D + F ID +G I ++ D E +++ +A D+G P LSS+ + +R++D ND+ P F+ +V EN +G ++G+I+A D D I+ D N S + Q+ T +D E T V + +P L +A I I V D+ND+ P R
Sbjct: 669 RSNTTQLLVNVIDANDNAPRFYTSQFQE-SVLENVPVGYNIIRVQAYDSDEGA------NAEITYSISERDDNFPLAVDPRTG--WVQTIKPLDREEQGRFAFQVVAKDGGVPPK-SASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFA-------ITSQN---GRGLITIAQSLDYKQ-EKRFLLTVAATDSGGR---SDTATVHINITDANNFAP---IFENAPYSASVF--EDAPVGTTVLV-VSATDSDVGVNAQITYSL----NEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLL------TVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVA--ASDPDVGLNGRIKYLLSDRDIEDGS--FVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP-LSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRAASPP-----LRNDAHIEILVTDVNDNAPVLR 1221 HSP 2 Score: 139.428 bits (350), Expect = 8.544e-33 Identity = 164/613 (26.75%), Postives = 262/613 (42.74%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLE-LPFKLGNSSDFELAKHFKDGVPYLIIT-STLDREKTSMYTFTLIAID--GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIV----DPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAY----VQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNI-YKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNT-NASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGK--IYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQN--RASKLITLDPLTGQIRTRYPIDREKTSTITFFVESK---NPSRIFNDLIQEAMIVITVRDLNDSPPTFR 2207
++V V D ND++P F Q +I E +G + +A D D + Y +E + G + D E+ D +I T S+LDRE + Y + A D + R T + +K+ D NDN P+F Y + E+ + + I TD D+ N I + + F++D + V + LDYE + S+ I AQDGG S S+T L + +++ ND +P RF + Q E L N + Y VQ D+D N I E P+ + + ++T + +DRE F Q D +P + ++S+ I + DVNDN P F Y + E+ D+D L+ ++T + F I SQNG+ I +QS D+++E + V ATD G S ++T+ + I D N+ AP F + ++ V E+ +G + ++ATD D + + I + + +S N + +++P TG I T P+DRE TS V +K NPS L + I V D+ND+ P F+
Sbjct: 450 LQVNVLDCNDHSPTFEAEQFE-ASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQ---SQFSID-------SMSGDVSLVKPLDYESV-RSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAP--RFYTSQFQ--------ESVLENVPVGYNIIRVQAYDSDEGANA--------EITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRF--------AFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEIT-------TGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG---RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPS-----LSDTTDVEIGVTDVNDNAPAFK 1008 HSP 3 Score: 125.561 bits (314), Expect = 1.775e-28 Identity = 130/492 (26.42%), Postives = 225/492 (45.73%), Query Frame = 3
Query: 768 TEITIKIR-DINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDED-ENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAIN---NLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNI-YKQFSLRTTQNIDREANEPF--LIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQI-EENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLK 2213
T+I ++R ++ + +P FE+ +Y+ ++ E P + T D E+ + M + LD QS+ KV ++ + +LD E L F++VA D S T TL++ +L+ ND SP +Q SI EG + ++ +D D N +++ + + + + + I + + T ++DRE ++ + L+ + + + Q + AS+ + + D NDN P+F++ Y Q+ E+ E A I A D D N + Y I S F IDS +G + + D+E Y ++ A D G P+R S+++ ++V + D NDNAP+F S F V ENV +G+ I ++ A D D + I S S+ + + +DP TG ++T P+DRE+ F V +K+ + +VITV+D+ND+ P F K
Sbjct: 342 TDIARRVRRELRNQSPYFEQALYVASVLEE---QPAGAAVTTVRARDPEDSPVVYSM----------VSLLDSRSQSLFKVDSRTGVVTTSASLDRE-LMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTF----EAEQFEA--SIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERR------TATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQ---FSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR-SNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAE----ITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGG--VPPKSASSSVVITVQDVNDNDPAFNPK 797 HSP 4 Score: 99.3673 bits (246), Expect = 1.706e-20 Identity = 118/517 (22.82%), Postives = 225/517 (43.52%), Query Frame = 3
Query: 486 QTPY-------CTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMH------NSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQD---GGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPV---NIYKQFSLRTTQNIDREANEPFLIDS----KIIVTVQCDDYDNEIPLNTNASIFII-INDVNDNPPKFTQNVYYGQIEENI-NNHEVFMN-AAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRD 1955
Q+PY ++ E +P G + +A+D +++ S L L + S + GV + +++LDRE ++ F ++A D R +G T + + + D ND++P FE + +I+E V + + TD+D +N I+ + Q+ IF +D I + R ++ S+ + A D ++TA++++++L+ ND P+ Q+ G + +A+++ +DAD N + R+ + N QFS+ + D +P +S ++++ Q D P +N + ++ + D NDN P+F Y Q +E++ N V N + A D D N ++TY I + ++ +D + G + + D E++ ++F VVA D G P + S+SS++++ ++D NDN P F+ ++ V E+ G + + ATD D
Sbjct: 355 QSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSL-----LDSRSQSLFKVDSRTGV--VTTSASLDRELMDVHYFRVVATDDSFPPR-SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSD--------SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVP---EDQWGGTEDNTVAHIRATDADQGNN-----------------AAIRYAIIGGNTQSQFSIDSMSG-DVSLVKPLDYESVRSYRLVIRAQ----DGGSPSRSNTTQLLVNVIDANDNAPRF----YTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPK-SASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD 822
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Zebrafish
Match: pcdh1gc6 (protocadherin 1 gamma c 6 [Source:ZFIN;Acc:ZDB-GENE-041118-17]) HSP 1 Score: 224.942 bits (572), Expect = 1.332e-60 Identity = 199/633 (31.44%), Postives = 310/633 (48.97%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIE--ENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDG--VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE--QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEEN-INNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSS--NAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF--------SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN 2120
L V+ +IDRE LCP + ++ Q+ N +Q + + + + D NDN P+F QT +E E+ LG R PL A+DLD S+ SY L N F L K DG VP L+I LDREK S + L A+DG + + TG T I I + D NDNAPKF+ P+Y +++E V + I TD DE +NG + + E + K+F L ++ + N+DYE +LY F + A+D G L ++++I I++ ND PEI + + S+ GT ++A + V D DS +N ++P ++ S H +SL T ++DRE + I ++V D+ +P L T +I + + DVNDNPP F+Q Y ++EN + +F ++ A D D N +TY I D ++ + YF I+S+NG IY+ SFD+EK + S +V A DQG P+ LSS++T+ V I D+NDNAP S SH + + + GHL+ ++ A D DS H F +++ + + L +++ TG++RT+ + S+ +E K+
Sbjct: 90 LVVNSRIDRESLCP--------------QSASCVVPLQVIIENP-LQLHRVEIEIQDINDNAPIF---QTSEGVLEIAESITLGDRFPLESAEDLDVGKNSLKSYVLS------NDECFRLNVKTLADGRKVPELVIDKPLDREKKSAHKLILTAVDGGDPAK-TGTTVIQINVLDSNDNAPKFDLPMYKSSLREAAPVGSTVITIKATDLDEGDNGELQYFLGVHTPEPVRKMFALK-------PDTGEIIVLGNIDYESNKLYR---FDVSAKDKGNPELVGHSSVQIDIIDENDNPPEIILTSSPSPVPENASV--GT----VVALINVKDLDSGVNGRVSINISPGFPFTLKPSFENH-------YSLVTDSSLDREIYAEYNI---LLVAT-----DSGVPSLKTEKTINVKVLDVNDNPPSFSQTSYNVYVQENNLAGVSLF---SVSATDNDQDKNALLTYSILDLGSNQVPASSYFYINSENGTIYSMSSFDYEKMKLISIVVQAKDQGSPS-LSSNATVHVFILDRNDNAPAVIYPSTSMGSVSHQR--MPRSAKAGHLVTKVTAVDADS--GHNAWLFYRLAEATD--ASLFSVNLHTGEVRTKRAVSEHDDSSQRLVLEIKD 656 HSP 2 Score: 73.1738 bits (178), Expect = 1.598e-12 Identity = 78/280 (27.86%), Postives = 117/280 (41.79%), Query Frame = 3
Query: 1389 IDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFII-INDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHK-------DIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+DRE K+I+T D P T ++ I + D NDN PKF +Y + E + I A D D NG++ Y + F + G+I + D+E +Y F V A D+G+P L S++ + I D+NDN P+ + V EN +G ++ IN D DS + F +K +N S L+T L +I Y I + +S PS L E I + V D+ND+PP+F
Sbjct: 206 LDREKKSAH----KLILTA----VDGGDPAKTGTTVIQINVLDSNDNAPKFDLPMYKSSLREAAPVGSTVI--TIKATDLDEGDNGELQYFLGVHTPEPVRKMFALKPDTGEIIVLGNIDYESNKLYRFDVSAKDKGNP-ELVGHSSVQIDIIDENDNPPEIILTSSPSPVPENASVGTVVALINVKDLDSGVNGRVSINISPGFPFTLKPSFENHYS-LVTDSSLDREIYAEYNI-------LLVATDSGVPS-----LKTEKTINVKVLDVNDNPPSF 461
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Zebrafish
Match: pcdh1g26 (protocadherin 1 gamma 26 [Source:ZFIN;Acc:ZDB-GENE-050609-21]) HSP 1 Score: 224.172 bits (570), Expect = 5.147e-60 Identity = 199/633 (31.44%), Postives = 310/633 (48.97%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIE--ENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDG--VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE--QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEEN-INNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSS--NAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF--------SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN 2120
L V+ +IDRE LCP + ++ Q+ N +Q + + + + D NDN P+F QT +E E+ LG R PL A+DLD S+ SY L N F L K DG VP L+I LDREK S + L A+DG + + TG T I I + D NDNAPKF+ P+Y +++E V + I TD DE +NG + + E + K+F L ++ + N+DYE +LY F + A+D G L ++++I I++ ND PEI + + S+ GT ++A + V D DS +N ++P ++ S H +SL T ++DRE + I ++V D+ +P L T +I + + DVNDNPP F+Q Y ++EN + +F ++ A D D N +TY I D ++ + YF I+S+NG IY+ SFD+EK + S +V A DQG P+ LSS++T+ V I D+NDNAP S SH + + + GHL+ ++ A D DS H F +++ + + L +++ TG++RT+ + S+ +E K+
Sbjct: 90 LVVNSRIDRESLCP--------------QSASCVVPLQVIIENP-LQLHRVEIEIQDINDNAPIF---QTSEGVLEIAESITLGDRFPLESAEDLDVGKNSLKSYVLS------NDECFRLNVKTLADGRKVPELVIDKPLDREKKSAHKLILTAVDGGDPAK-TGTTVIQINVLDSNDNAPKFDLPMYKSSLREAAPVGSTVITIKATDLDEGDNGELQYFLGVHTPEPVRKMFALK-------PDTGEIIVLGNIDYESNKLYR---FDVSAKDKGNPELVGHSSVQIDIIDENDNPPEIILTSSPSPVPENASV--GT----VVALINVKDLDSGVNGRVSINISPGFPFTLKPSFENH-------YSLVTDSSLDREIYAEYNI---LLVAT-----DSGVPSLKTEKTINVKVLDVNDNPPSFSQTSYNVYVQENNLAGVSLF---SVSATDNDQDKNALLTYSILDLGSNQVPASSYFYINSENGTIYSMSSFDYEKMKLISIVVQAKDQGSPS-LSSNATVHVFILDRNDNAPAVIYPSTSMGSVSHQR--MPRSAKAGHLVTKVTAVDADS--GHNAWLFYRLAEATD--ASLFSVNLHTGEVRTKRAVSEHDDSSQRLVLEIKD 656 HSP 2 Score: 72.7886 bits (177), Expect = 1.730e-12 Identity = 75/267 (28.09%), Postives = 113/267 (42.32%), Query Frame = 3
Query: 1428 KIIVTVQCDDYDNEIPLNTNASIFII-INDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHK-------DIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
K+I+T D P T ++ I + D NDN PKF +Y + E + I A D D NG++ Y + F + G+I + D+E +Y F V A D+G+P L S++ + I D+NDN P+ + V EN +G ++ IN D DS + F +K +N S L+T L +I Y I + +S PS L E I + V D+ND+PP+F
Sbjct: 215 KLILTA----VDGGDPAKTGTTVIQINVLDSNDNAPKFDLPMYKSSLREAAPVGSTVI--TIKATDLDEGDNGELQYFLGVHTPEPVRKMFALKPDTGEIIVLGNIDYESNKLYRFDVSAKDKGNP-ELVGHSSVQIDIIDENDNPPEIILTSSPSPVPENASVGTVVALINVKDLDSGVNGRVSINISPGFPFTLKPSFENHYS-LVTDSSLDREIYAEYNI-------LLVATDSGVPS-----LKTEKTINVKVLDVNDNPPSF 461
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Zebrafish
Match: pcdh2ab9 (protocadherin 2 alpha b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-8]) HSP 1 Score: 211.075 bits (536), Expect = 1.021e-55 Identity = 184/606 (30.36%), Postives = 296/606 (48.84%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFR-HPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQN-VYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAM--YFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP----QFSQSHFAFFVDE---NVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRT 2060
L+V ++IDREELC I C +++ +I N ++ ++I V + D ND++P F + I EN +G R L A+D D+ SV SYKL D E+ +D +P+L++ LDRE + + L AIDG R +G IT+ + D+NDN P F +Y T+ ENV + + +++ +D D NG + + I IF+LD ++ ++R +D+E+ + ++ I A D G+ L++ + I+IL++ND P I ++ E + +++ + V+D D+ IN ++ CSL E F P FSL T +DRE F I T+ D + PL++ ++ + ++DVNDNPP+F+ N V IE N + + A DKDL+ N ++Y I S + + + ++S+ G +Y +SFDFE + F ++ATD G P+ LSS+ T+ V I DQNDN P S + A V+E NV GHL+ ++ A D D + + + F ++ S++ L LD TGQIRT
Sbjct: 86 LRVQRKIDREELC------------DGIGAC--LINLKIVVENP-LEIHYIAVEITDVNDHSPTF-TEKEKRLEISENTLIGTRFQLQAARDPDSGVNSVRSYKL----SQNEHFDLEIRDRAEDKLPFLVLQKPLDRENKAEHYLILTAIDGGNPQR-SGTLNITVIVLDVNDNRPMFSHDVYSSTVHENVQLGTLVLKVMASDSDYGPNGEVSYSFGGDNSDNIFHIFSLD-------RITGEIRVTGEVDFEK-NNVYKLDIQAVDSGQPPLNTDCRVIIKILDLNDNKPTIEVTSLSNVVS------EDSKPGTLISLISVTDRDTGINGRVVCSLS--------EHVPFELKPSVQENMFSLVTKGKLDRETLSHFDI------TITATDL-GQPPLSSYKTLSVQVSDVNDNPPEFSLNPVELYMIENNAAGAPIL---TLSAFDKDLNENAIISYQIIKGNGSQSDLTSFLNVNSETGAVYALKSFDFETVKKFQFHILATDSGSPS-LSSNVTVNVFILDQNDNVPVILYPVSANGSAEGVEEIPRNVNAGHLVTKVRAYDAD-IGYNGWLLFSLQEVSEH---SLFALDRYTGQIRT 633 HSP 2 Score: 95.1301 bits (235), Expect = 2.326e-19 Identity = 107/376 (28.46%), Postives = 165/376 (43.88%), Query Frame = 3
Query: 1119 LRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDRE-ANEPFLIDSKIIVTVQCDDYDNEIPLNTNA-SIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMY-FRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRD---------SLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
+ ++I +VND SP F +++ I E TL D DS +N ++ L+ +E R F L + +DRE E +LI + I D P + +I +I+ DVNDN P F+ +VY + EN+ + + + A+D D NG+V+Y NS N + F +D G+I + DFEK ++Y + A D G P L++ +I++I D NDN P + + V E+ + G LI I+ TDRD SL EH + F +K Q L+T L + + + I TIT + P + L + V D+ND+PP F L
Sbjct: 121 IAVEITDVNDHSPT--FTEKEKRL----EISENTLIGTRFQLQAARDPDSGVNSVRSYKLSQNEHFDLE---IRDRAEDKLPF-LVLQKPLDRENKAEHYLILTAI---------DGGNPQRSGTLNITVIVLDVNDNRPMFSHDVYSSTVHENVQLGTLVLK--VMASDSDYGPNGEVSYSFGG-DNSDNIFHIFSLDRITGEIRVTGEVDFEKNNVYKLDIQAVDSGQP-PLNTDCRVIIKILDLNDNKPTIEVTSLSNVVSEDSKPGTLISLISVTDRDTGINGRVVCSLSEH--VPFELKPSVQENMFSLVTKGKLDRETLSHFDI------TITATDLGQPPLSSYKTL------SVQVSDVNDNPPEFSL 459 HSP 3 Score: 85.1149 bits (209), Expect = 3.252e-16 Identity = 88/306 (28.76%), Postives = 142/306 (46.41%), Query Frame = 3
Query: 1371 LRTTQNIDRE----ANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITF---FVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFR-------LKDPSKSQLIISL 2246
LR + IDRE LI+ KI+V E PL + I + I DVND+ P FT+ +I EN F A A D D +N +Y + ++ + R + + + + D E ++ + I+ A D G+P R S + I V + D NDN P FS ++ V ENV++G L+ ++ A+D D P + ++ + D+ + + +LD +TG+IR +D EK + V+S P L + ++I + DLND+ PT + + SK +ISL
Sbjct: 86 LRVQRKIDREELCDGIGACLINLKIVV---------ENPLEIHY-IAVEITDVNDHSPTFTEKEKRLEISENTLIGTRFQLQA--ARDPDSGVNSVRSYKLSQNEHFDLEIRDRAEDKLPFLVLQKPLDRENKAEHYLILTAIDGGNPQR-SGTLNITVIVLDVNDNRPMFSHDVYSSTVHENVQLGTLVLKVMASDSDYGP-NGEVSYSFGGDNSDNIFHIFSLDRITGEIRVTGEVDFEKNNVYKLDIQAVDSGQPP-----LNTDCRVIIKILDLNDNKPTIEVTSLSNVVSEDSKPGTLISL 372
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Zebrafish
Match: pcdh17 (protocadherin 17 [Source:ZFIN;Acc:ZDB-GENE-090608-3]) HSP 1 Score: 211.846 bits (538), Expect = 1.521e-55 Identity = 196/634 (30.91%), Postives = 302/634 (47.63%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFV--RNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP----QFSQSHFA-FFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE 2111
L +D +S L +KQ IDRE LC + N C L ++ N++E+ I+V + D NDN P FP Q I EN G R PL A D D + +Y++ + S F L K DG P L++ +LDRE+ S +T + A DG E + +G +I +K+ D NDN+P FE+P Y+ I EN + I + TD DE NG++ + I ++F++D I K+Q ++ D+E+ E + A+D G N + + +++L+ ND P I FV R G ++ E ++A V+V+D DS N QLQC +L N+ F+ N +++ T + +DRE + + I T+ D N PLN+ S + I D NDN P+FT+ VY Q+ EN E ++ A D DL NG V+Y + + S Y I +G IY +SF++E+ + F V A D G+P+ L S++T+ V + D NDN P Q+ A V NV +GH+I + A D D E + + + S L +D +TG++RT P+ E T + ++
Sbjct: 64 LIDVDPESGLLYTKQRIDRETLC------RQNSKCQ--------LSMEVFANDKEI--CMIKVEIQDINDNAPSFPSEQIDI-DISENAAPGTRFPLAAAYDPDTKENGLKTYQI----TRDDYSIFSLDVKSRGDGTKFPELVVQRSLDREERSHHTLIITATDGGEYPK-SGTMQINVKVTDSNDNSPVFEQPSYVVEIPENAPLGTVIIDLNATDSDEGINGQVTYSFSCYVPDRIKELFSIDPRTGVI-KIQGKI------DFEE-NPIIEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPSIGFVAVRQG-------AVSEAATPGTVIALVRVTDKDSGRNGQLQCRILG--NV------PFKLEENYDNFYTVVTDRPLDREVKDEYNI------TIVAKDNGNP-PLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYL--GSVLAHDPDLGQNGTVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPH-LESNTTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDND-FGESGRLTYEI---SDGNEEHLFEIDSVTGEVRTAQPLWEEVTPVVELIIK 638 HSP 2 Score: 92.8189 bits (229), Expect = 1.514e-18 Identity = 129/490 (26.33%), Postives = 205/490 (41.84%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVT-DEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN---QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFT-QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQD---FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRF--IVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
I ++I+DINDNAP F I EN F + D D ENG LK + ++ + IF+LD+ + G ++ +LD E+ H I A DGG S T + +++ + ND SP +Q + I E ++ + +D+D IN S P I + R V ++ ID E N ID VQ D N IP + ++ ++ D NDN P V G + E V A + DKD NG++ I FK N F + + D E + Y+ +VA D G+P L+S+ + V+I D+NDNAP+F++ + V EN G +G + A D D L ++ + + + + S+ + + + P G I + E+T F V++K+ L + ++V D+ND+ P L
Sbjct: 108 IKVEIQDINDNAPSFPSEQIDIDISENAAPGTRFPLAAAYDPDTKENG---LKTYQITRDDYS-IFSLDVKSRGDGTKFPELVVQRSLDREERSH-HTLIITATDGGEYPKSGTMQINVKVTDSNDNSPVF------EQPSYVVEIPENAPLGTVIIDLNATDSDEGINGQVTYSFSCYVPDRIKELFSIDPRTGV-------IKIQGKIDFEENPIIEID------VQAKDQGPNPIPGHCKVTVKVL--DRNDNWPSIGFVAVRQGAVSEAATPGTVI--ALVRVTDKDSGRNGQLQCRILGNVPFKLEENYDNFYT------VVTDRPLDREVKDEYNITIVAKDNGNP-PLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPD-LGQNGTVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPH--LESNTTVRVSVLDVNDNIPVIVL 559 HSP 3 Score: 84.7297 bits (208), Expect = 4.908e-16 Identity = 88/312 (28.21%), Postives = 137/312 (43.91%), Query Frame = 3
Query: 1371 LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQ---------DFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICES 2279
L T Q IDRE +SK ++++ D EI + I + I D+NDN P F I EN F AA A D D NG TY I D K+ + F ++ +S D E+ S ++ I+ ATD G + S + I V++ D NDN+P F Q + + EN +G +I +NATD D + + + +R +L ++DP TG I+ + ID E+ I V++K+ N + + + V D ND+ P+ I ++QG + E+
Sbjct: 74 LYTKQRIDRETL--CRQNSKCQLSMEVFANDKEICM-----IKVEIQDINDNAPSFPSEQIDIDISENAAPGTRFPLAA--AYDPDTKENGLKTYQITRDDYSIFSLDVKSRGDGTKFP------ELVVQRSLDREERSHHTLIITATDGGEYPK-SGTMQINVKVTDSNDNSPVFEQPSYVVEIPENAPLGTVIIDLNATDSDEG-INGQVTYSFSCYVPDRIKELFSIDPRTGVIKIQGKIDFEENPIIEIDVQAKDQGP--NPIPGHCKVTVKVLDRNDNWPS------------IGFVAVRQGAVSEA 354 HSP 4 Score: 78.9518 bits (193), Expect = 2.971e-14 Identity = 129/493 (26.17%), Postives = 211/493 (42.80%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIE--ENKPLGYRIPLPKAQDLDNA-----TFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEG-NRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP---IFQILVTDEDEDENGRIDLKMHNSG----QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQ----FSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEE-----NINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVR 1838
I V V D NDN+PVF + P +E EN PLG I A D D T+S S Y +P ++ + + GV + I +D E+ + + A D +G N G ++T+K+ D NDN P + +R + P I + VTD+D NG++ ++ + +E + +T+ + D+ + + ++ + IVA+D G L+ST + ++IL+ ND +P RF + + + E + + L V D D N L P N+ EES + VNI ++LR+ + E + F D K VQ D N L +N ++ + + DVNDN P + E N+ + + A D D +G++TY I D + F IDS G++ +Q E + I+ TD G P+ LS+ + +IV+
Sbjct: 219 INVKVTDSNDNSPVF---EQPSYVVEIPENAPLGTVIIDLNATDSDEGINGQVTYSFSCY---VPDRIKELFSIDP----RTGV--IKIQGKIDFEENPIIEIDVQAKD--QGPNPIPGHCKVTVKVLDRNDNWPSIGF-VAVRQGAVSEAATPGTVIALVRVTDKDSGRNGQLQCRILGNVPFKLEENYDNFYTV-VTDRPLDR--------------EVKDEYNITIVAKDNGNPPLNSTKSFTVKILDENDNAP--RFTK----MVYLLQVPENNIPGEYLGSVLAHDPDLGQNGTVSYSLLPSNVS--EESITTY-VNIKPTDGAIYALRS---FNYEQTKYF--DFK----VQAKDSGNPH-LESNTTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHII--TTVRAVDNDFGESGRLTYEISD---GNEEHLFEIDSVTGEVRTAQPLWEEVTPVVELIIKVTDHGKPS-LSAMAKLIVK 656
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Zebrafish
Match: CR774179.7 (protocadherin gamma-C5-like [Source:NCBI gene;Acc:103911742]) HSP 1 Score: 208.764 bits (530), Expect = 2.756e-55 Identity = 183/628 (29.14%), Postives = 307/628 (48.89%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVD--DENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL--AKHFKDG--VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQIL-VTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQD--FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQ--FSQSHFAFFVDE----NVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN 2120
L V++ IDRE K+CG C +L Q+ E F RV VD D NDN+P F + T + + E G R L AQD D + S+ +Y L N +D+ + K+ KDG VP +++ LDREK S+ L+ IDG + ++G T+IT+++ D+NDNAP FE+ +Y + EN I QI+ D D+ N I+ + + E + +F SI +++ +LDYE + +++ I A+D G + +++ +L+VND +PEI + + + E + ++A + V D DS IN +L++ ++ F+ ++L T +DRE + I+ K PL ++ I + I DVNDNPP F++ VY I+EN + A++ A+D D N K+ Y + D ++ + Y I+++NG I++ SFD+EK ++ IV+A DQG LSS++T+ V I DQNDNAP + + ++ + + GHL+ ++ A D DS H F +++ + + L +++ TG++RT+ + S+ +E K+
Sbjct: 84 LLVNELIDRE------------KLCGQSARC--VLPLQVII---EDPLQFYRVDVDIQDINDNSPSF-LSDTKFIDVSETTLTGARFRLEPAQDADVGSNSLRTYAL-------NKNDYFILQVKNDKDGTKVPEIVLQKALDREKQSIEHLILMGIDGGDP-ASSGTTQITVRVLDVNDNAPVFEQDLYEIKVMENAAPGTIIQIVKAIDLDDGLNSEIEYSLGSDTPETLKNLF-------SINSNTGELKISKSLDYE-MSTTYKIDIRARDKGGPVMEGHCRVQVNVLDVNDNAPEIIITSSPKPVR------EDAPAGTMVALINVKDLDSGING-------NVTLLILSDTPFKLKPTFANHYALVTDSKLDREKFPKYDIELKA-------SDSGSPPLVSSKLITVNILDVNDNPPVFSERVYSVYIKENSAPGSIL--ASVTASDLDTGENAKIVYSVIDTNTRDVPVSSYVYINAENGSIFSMHSFDYEKIKVFHVIVLAKDQGS-QSLSSNATVHVFILDQNDNAPAVIYPSTSMGSVSNQRMPRSAKAGHLVTKVTAVDADS--GHNAWLFYRLAEATD--ASLFSVNLHTGEVRTKRAVSEHDDSSQRLVIEIKD 650 HSP 2 Score: 76.6406 bits (187), Expect = 1.222e-13 Identity = 89/364 (24.45%), Postives = 160/364 (43.96%), Query Frame = 3
Query: 1125 IQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNAS-IFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTG---QIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ I ++ND SP F+ + + I + E TL+ DAD N L+ L + +++ ++ + K + + +DRE I+ I++ + D P ++ + I + + DVNDN P F Q++Y ++ EN + + A D D LN ++ Y + + F I+S G++ S+S D+E + Y + A D+G P + + V + D NDNAP+ + V E+ G ++ IN D DS + ++ ++ SD+ + L P + T +DREK + +E K L+ +I + + D+ND+PP F
Sbjct: 121 VDIQDINDNSPS--FLSDTKFI----DVSETTLTGARFRLEPAQDADVGSNSLRTYALNKNDYFILQ---VKNDKDGTKVPEIVLQKALDREKQS---IEHLILMGIDGGD-----PASSGTTQITVRVLDVNDNAPVFEQDLYEIKVMENAAPGTIIQ--IVKAIDLDDGLNSEIEYSLGSDTPETLKNLFSINSNTGELKISKSLDYEMSTTYKIDIRARDKGGP-VMEGHCRVQVNVLDVNDNAPEIIITSSPKPVREDAPAGTMVALINVKDLDS-GINGNVTLLILSDTPFK------LKPTFANHYALVTDSKLDREKFPK--YDIELKASDSGSPPLVSSKLITVNILDVNDNPPVF 455
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Xenopus
Match: pcdh10 (protocadherin 10 [Source:NCBI gene;Acc:779938]) HSP 1 Score: 209.534 bits (532), Expect = 7.057e-55 Identity = 202/656 (30.79%), Postives = 306/656 (46.65%), Query Frame = 3
Query: 282 LKVSKQIDREELCP--PQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVD--DENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGVPY--LIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRI--DLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQ--DFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNA-----PQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSP 2195
L V+++IDRE++C P ML L E F RV ++ D NDN PVFP I E+ G R PL A DLD S+ +Y++ +S F L + DG + L++ LDRE+ +++ + L AIDG R TG +TIK+ D NDN P FE+ IY ++ EN + Q+ TD+DE +NG + HNS + + IF +D ++ I LDYE S++ + A+D G N++ + +++L++ND PEI F T S+ E ++A V+D DS N Q+ C +L + FR ++ +++ T +DREA + VTV D PL++ SI + + DVNDN P+FTQ +Y + EN N ++ +A+ A DKD N ++Y+I D + S Y I+S+NG +Y ++FD+E+ +SF+V A D G P LSS++T+ + I DQNDNA PQ F+ E G+L ++ A D D E ++ R N S L +D TG++RT I ++P R F +V+ VRD P
Sbjct: 71 LYVNEKIDREQICKQNPSCMLHLEVFL-------------------ENPLEFFRVEIEVLDINDNPPVFPQSDI-QVEISESATPGTRFPLESAYDLDVGNNSLRTYEIT------TNSYFNLDVQTQGDGNKFAELVLKKQLDREQQALHRYVLTAIDGGTPQR-TGTALLTIKVLDSNDNVPVFEQQIYTVSLPENSPPGTMVIQLNATDQDEGQNGEVVYSFSSHNSPK--VRDIFGID-------PRTGRIEIIGELDYED-SGSYQVYVQAKDLGPNAVPVHCKVLVKVLDLNDNPPEISFS------TVKESVSESASPGTVVALFSVTDRDSEENGQIHCEILG--------DVPFRLKLSYKNYYTIVTEGTLDREAMATY------TVTVLARDRGTP-PLSSTKSIQVQVADVNDNSPRFTQAIYNVYVIEN-NVPGAYI-SAVSATDKDEEENANISYYILECDIQGMSVFTYVSINSENGYLYALRTFDYEQLKDFSFMVEARDGGTPP-LSSNATVNIIIVDQNDNAPAIVSPQGRNGTAKEFLPRTAEPGYLFTRVVAVDSD---EGENARLTYSILRGNDMS-LFRMDWRTGELRTARKI-----------TNKRDPHRPFE-------LVVEVRDHGQPP 643 HSP 2 Score: 89.3521 bits (220), Expect = 2.480e-17 Identity = 118/486 (24.28%), Postives = 205/486 (42.18%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSG----QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQ-LYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRAS-KLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPT 2201
+ I++ DINDN P F + I E+ F + DL + N+ + N F LD+ Q G A++ LD EQ H + + A DGG + TA L I++L+ ND P QQI S+ E + ++ + +D D N + N + + P + + +D E + + V VQ D N +P++ + + + D+NDNPP+ + + + E+ + V A D+D NG++ H + + + FR+ Y + D E + Y+ V+A D+G P LSS+ +I V++ D NDN+P+F+Q+ + +V EN G I ++ATD+D +I++ D Q + ++++ G + D E+ +F VE+++ L A + I + D ND+ P
Sbjct: 106 VEIEVLDINDNPPVFPQSDIQVEISESATPGTRFPL---------ESAYDLDVGNNSLRTYEITTNSYFNLDVQTQGDGNKFAELVLKKQLDREQQALH--RYVLTAIDGGTPQRTGTALLTIKVLDSNDNVPVFE-----QQIYT-VSLPENSPPGTMVIQLNATDQDEGQNGEVVYSFSSHNSPKVRDIFGIDP----RTGRIEIIGELDYEDSGSYQ------VYVQAKDLGPNAVPVH--CKVLVKVLDLNDNPPEISFSTVKESVSESASPGTVV--ALFSVTDRDSEENGQI--HCEILGD----VPFRLKLSYKNYYTIVTEGTLDREAMATYTVTVLARDRGTPP-LSSTKSIQVQVADVNDNSPRFTQAIYNVYVIENNVPGAYISAVSATDKDEEENANISYYILECDIQGMSVFTYVSINSENGYLYALRTFDYEQLKDFSFMVEARDGGT--PPLSSNATVNIIIVDQNDNAPA 551 HSP 3 Score: 54.6842 bits (130), Expect = 9.344e-7 Identity = 66/242 (27.27%), Postives = 108/242 (44.63%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIR-TIKENV--IVDPIF---QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILN 1139
I+V V D NDN+P F IE N P Y + + ++S Y LE + G S ++ + ++G YL T D E+ ++F + A DG ++ T + I I D NDNAP P T KE + +P + +++ D DE EN R+ + +L +D G+++ + N D + FE + +D G+ LSSTA +++QI++
Sbjct: 428 IQVQVADVNDNSPRFTQAIYNVYVIENNVPGAYISAVSATDKDEEENANISYYILECDIQ-GMSVFTYVSINSENG--YLYALRTFDYEQLKDFSFMVEARDGGTPPLSSNAT-VNIIIVDQNDNAPAIVSPQGRNGTAKEFLPRTAEPGYLFTRVVAVDSDEGENARLTYSILRGND------MSLFRMDWRTGELRTARKITNKRD---PHRPFELVVEVRDHGQPPLSSTALIQVQIVD 656
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Xenopus
Match: pcdh10 (protocadherin 10 [Source:NCBI gene;Acc:779938]) HSP 1 Score: 209.149 bits (531), Expect = 8.647e-55 Identity = 199/654 (30.43%), Postives = 303/654 (46.33%), Query Frame = 3
Query: 282 LKVSKQIDREELCP--PQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVD--DENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGVPY--LIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQ--DFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNA-----PQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSP 2195
L V+++IDRE++C P ML L E F RV ++ D NDN PVFP I E+ G R PL A DLD S+ +Y++ +S F L + DG + L++ LDRE+ +++ + L AIDG R TG +TIK+ D NDN P FE+ IY ++ EN + Q+ TD+DE +NG + + + IF +D ++ I LDYE S++ + A+D G N++ + +++L++ND PEI F T S+ E ++A V+D DS N Q+ C +L + FR ++ +++ T +DREA + VTV D PL++ SI + + DVNDN P+FTQ +Y + EN N ++ +A+ A DKD N ++Y+I D + S Y I+S+NG +Y ++FD+E+ +SF+V A D G P LSS++T+ + I DQNDNA PQ F+ E G+L ++ A D D E ++ R N S L +D TG++RT I ++P R F +V+ VRD P
Sbjct: 71 LYVNEKIDREQICKQNPSCMLHLEVFL-------------------ENPLEFFRVEIEVLDINDNPPVFPQSDI-QVEISESATPGTRFPLESAYDLDVGNNSLRTYEIT------TNSYFNLDVQTQGDGNKFAELVLKKQLDREQQALHRYVLTAIDGGTPQR-TGTALLTIKVLDSNDNVPVFEQQIYTVSLPENSPPGTMVIQLNATDQDEGQNGEVVYSFSSHNSPKVRDIFGID-------PRTGRIEIIGELDYED-SGSYQVYVQAKDLGPNAVPVHCKVLVKVLDLNDNPPEISFS------TVKESVSESASPGTVVALFSVTDRDSEENGQIHCEILG--------DVPFRLKLSYKNYYTIVTEGTLDREAMATY------TVTVLARDRGTP-PLSSTKSIQVQVADVNDNSPRFTQAIYNVYVIEN-NVPGAYI-SAVSATDKDEEENANISYYILECDIQGMSVFTYVSINSENGYLYALRTFDYEQLKDFSFMVEARDGGTPP-LSSNATVNIIIVDQNDNAPAIVSPQGRNGTAKEFLPRTAEPGYLFTRVVAVDSD---EGENARLTYSILRGNDMS-LFRMDWRTGELRTARKI-----------TNKRDPHRPFE-------LVVEVRDHGQPP 643 HSP 2 Score: 89.3521 bits (220), Expect = 2.301e-17 Identity = 118/486 (24.28%), Postives = 203/486 (41.77%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSG----QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQ-LYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRAS-KLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPT 2201
+ I++ DINDN P F + I E+ F + DL + N+ + N F LD+ Q G A++ LD EQ H + + A DGG + TA L I++L+ ND P QQI S+ E + ++ + +D D N + N + + P + + +D E + + V VQ D N +P++ + + + D+NDNPP+ + + + E+ + V A D+D NG++ I + FR+ Y + D E + Y+ V+A D+G P LSS+ +I V++ D NDN+P+F+Q+ + +V EN G I ++ATD+D +I++ D Q + ++++ G + D E+ +F VE+++ L A + I + D ND+ P
Sbjct: 106 VEIEVLDINDNPPVFPQSDIQVEISESATPGTRFPL---------ESAYDLDVGNNSLRTYEITTNSYFNLDVQTQGDGNKFAELVLKKQLDREQQALH--RYVLTAIDGGTPQRTGTALLTIKVLDSNDNVPVFE-----QQIYT-VSLPENSPPGTMVIQLNATDQDEGQNGEVVYSFSSHNSPKVRDIFGIDP----RTGRIEIIGELDYEDSGSYQ------VYVQAKDLGPNAVPVH--CKVLVKVLDLNDNPPEISFSTVKESVSESASPGTVV--ALFSVTDRDSEENGQIHCEIL------GDVPFRLKLSYKNYYTIVTEGTLDREAMATYTVTVLARDRGTPP-LSSTKSIQVQVADVNDNSPRFTQAIYNVYVIENNVPGAYISAVSATDKDEEENANISYYILECDIQGMSVFTYVSINSENGYLYALRTFDYEQLKDFSFMVEARDGGT--PPLSSNATVNIIIVDQNDNAPA 551 HSP 3 Score: 54.6842 bits (130), Expect = 9.757e-7 Identity = 66/242 (27.27%), Postives = 108/242 (44.63%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIR-TIKENV--IVDPIF---QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILN 1139
I+V V D NDN+P F IE N P Y + + ++S Y LE + G S ++ + ++G YL T D E+ ++F + A DG ++ T + I I D NDNAP P T KE + +P + +++ D DE EN R+ + +L +D G+++ + N D + FE + +D G+ LSSTA +++QI++
Sbjct: 428 IQVQVADVNDNSPRFTQAIYNVYVIENNVPGAYISAVSATDKDEEENANISYYILECDIQ-GMSVFTYVSINSENG--YLYALRTFDYEQLKDFSFMVEARDGGTPPLSSNAT-VNIIIVDQNDNAPAIVSPQGRNGTAKEFLPRTAEPGYLFTRVVAVDSDEGENARLTYSILRGND------MSLFRMDWRTGELRTARKITNKRD---PHRPFELVVEVRDHGQPPLSSTALIQVQIVD 656
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Xenopus
Match: PCDH17 (protocadherin 17 [Source:NCBI gene;Acc:100485388]) HSP 1 Score: 203.756 bits (517), Expect = 7.579e-53 Identity = 193/638 (30.25%), Postives = 295/638 (46.24%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL----AKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILV----TDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP-----QFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE 2111
L +D DS + +KQ IDRE LC QL+ ++ N++E+ I+V + D NDN+P FP Q I EN G R PL A D D + +Y + DF L K DG P L+I LDRE+ S + L A+DG + R + +I +K+ D NDN+P FE Y+ I EN P+ +I++ TD DE NG + + I ++F++D G +Q + NLDYE+ E + A+D G N + + +++++ ND +P I FV Q +I E ++A V+V+D DS N QL C +L N+ F+ N +++ T + +DRE I + VT+ D + PLN+ S + I D NDNPP FT+ +Y Q+ EN E ++ A D DL NG V+Y I + S + ++ NG IY +SF++E+ + F V+A D G P+ L S++T+ V + D NDNAP V NV +G+LI + A D D + IV + + L +D +TG+I+T P E + + ++
Sbjct: 65 LLDVDQDSGVLYTKQRIDRESLCRRSPKCQLS--------------LEVFANDKEI--CMIKVDILDINDNSPNFPSEQIDI-DISENASPGTRFPLTSAHDPDAGENGLKTYVI-------TRDDFGLFSLDVKSRGDGTKFPELVIQKELDREEQSHHKLILTALDGGDPPR-SATIQINVKVIDSNDNSPVFEALSYMVEIPEN---SPLGRIVIDLNATDADEGSNGEVVYSFSGYAPDRIRELFSID---SKTGIIQVK----GNLDYEE-NGLIEIDVQARDQGPNPIPKHCKVTVKVIDKNDNAPSISFVSVRQG-----AISEAAPPGTVIALVRVTDKDSGKNGQLICRVLG--NV------PFKLEENYDNLYTVVTDRPLDRE------IQDEYNVTIIARD-NGSPPLNSTKSFSVKILDENDNPPHFTKAMYVLQVSENNIPGEYL--GSVLAQDPDLGHNGTVSYSILPSHVGDVSIYTFVSVNPTNGAIYALRSFNYEQTKYFEFKVLAKDSGSPH-LESNATVRVSVLDVNDNAPVICLPTLQNDTAEIHVPRNVGVGYLITTVRAMDNDFGESGRLTYEIVYGNEDH----LFEIDSVTGEIKTLTPYWDEVSPVVELVIK 639 HSP 2 Score: 91.6633 bits (226), Expect = 5.303e-18 Identity = 144/582 (24.74%), Postives = 242/582 (41.58%), Query Frame = 3
Query: 591 KLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIK--------------IRDINDNAPKFERPIYIRTIKENVIVDPIFQILVT-DEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQ---LQCSLLTPRNILMIEESRFRHPVNI-YKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFT-QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRAS--KLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQ 2258
KL +P + G S+F + ++ P+L LD ++ S +T ID R + K +++++ I DINDN+P F I EN F + D D ENG LK + ++ +F+LD+ + G ++ LD E+ H + + A DGG S+T + +++++ ND SP + ++ I E + +I+ + +DAD N S P R R +I K ++ N+D E N ID VQ D N IP + ++ +I D NDN P + +V G I E V A + DKD NG++ + + F+++ +Y + D E + Y+ ++A D G P L+S+ + V+I D+NDN P F+++ + V EN G +G + A D D L + + + + S ++++P G I + E+T F V +K+ L A + ++V D+ND+ P +I L TLQ
Sbjct: 43 KLGIPER-GRKSNFRV---LENSAPHL-----LDVDQDSGVLYTKQRIDRESLCRRSPKCQLSLEVFANDKEICMIKVDILDINDNSPNFPSEQIDIDISENASPGTRFPLTSAHDPDAGENG---LKTYVITRDDFG-LFSLDVKSRGDGTKFPELVIQKELDREEQSH-HKLILTALDGGDPPRSATIQINVKVIDSNDNSPVF------EALSYMVEIPENSPLGRIVIDLNATDADEGSNGEVVYSFSGYAP--------DRIRELFSIDSKTGIIQVKGNLDYEENGLIEID------VQARDQGPNPIPKHCKVTVKVI--DKNDNAPSISFVSVRQGAISEAAPPGTVI--ALVRVTDKDSGKNGQLICRVL------GNVPFKLEENYDNLYTVVTDRPLDREIQDEYNVTIIARDNGSP-PLNSTKSFSVKILDENDNPPHFTKAMYVLQVSENNIPGEYLGSVLAQDPD-LGHNGTVSYSILPSHVGDVSIYTFVSVNPTNGAIYALRSFNYEQTKYFEFKVLAKDSGSPH--LESNATVRVSVLDVNDNAP------------VICLPTLQ 564 HSP 3 Score: 79.7221 bits (195), Expect = 2.348e-14 Identity = 86/311 (27.65%), Postives = 142/311 (45.66%), Query Frame = 3
Query: 1371 LRTTQNIDREA---NEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQN-GKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIP 2285
L T Q IDRE+ P K ++++ D EI + I + I D+NDN P F I EN + F + H D D NG TY I DF S + R D ++ + D E++S + I+ A D G P R S++ I V++ D NDN+P F + + EN +G ++ +NATD D + ++ + + +R +L ++D TG I+ + +D E+ I V++++ N + + + + V D ND+ P+ IS +++QG I E+ P
Sbjct: 75 LYTKQRIDRESLCRRSP-----KCQLSLEVFANDKEICM-----IKVDILDINDNSPNFPSEQIDIDISENASPGTRFPLTSAH--DPDAGENGLKTYVITRDDFGLFSLDVKSRGDGTKFPELVIQKELDREEQSHHKLILTALDGGDPPR-SATIQINVKVIDSNDNSPVFEALSYMVEIPENSPLGRIVIDLNATDADE-GSNGEVVYSFSGYAPDRIRELFSIDSKTGIIQVKGNLDYEENGLIEIDVQARDQGP--NPIPKHCKVTVKVIDKNDNAPS------------ISFVSVRQGAISEAAP 357 HSP 4 Score: 70.0922 bits (170), Expect = 1.968e-11 Identity = 132/557 (23.70%), Postives = 228/557 (40.93%), Query Frame = 3
Query: 252 GLFILDSDS--------NLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNAT-----FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGK-TEITIKIRDINDNAPKFERPIYIRTIKENVIVDP------IFQILVTDEDEDENGRIDLKMHNSG----QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKF---TQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVR 1838
GLF LD S L + K++DREE +++L LD + +Q I V V D NDN+PVF + I EN PLG + A D D + +S S Y + +L + K G+ + + LD E+ + + A D +G K ++T+K+ D NDNAP I ++++ I + I + VTD+D +NG++ ++ + +E + ++T+ + D+ + + ++ + I+A+D G L+ST + ++IL+ ND P Q++ E + + L V D D N + P ++ V+IY S+ T N A F + + D+ P L +NA++ + + DVNDN P T +I N ++ + A D D +G++TY I + N + F IDS G+I + E + ++ TD G P+ LS+ + +I++
Sbjct: 168 GLFSLDVKSRGDGTKFPELVIQKELDREEQSHHKLILT-------------ALDGGDPPRSATIQ---INVKVIDSNDNSPVFEALSY-MVEIPENSPLGRIVIDLNATDADEGSNGEVVYSFSGYAPDRIREL-------FSIDSKTGI--IQVKGNLDYEENGLIEIDVQARD--QGPNPIPKHCKVTVKVIDKNDNAPS----ISFVSVRQGAISEAAPPGTVIALVRVTDKDSGKNGQLICRVLGNVPFKLEENYDNLYTV-VTDRPLDR--------------EIQDEYNVTIIARDNGSPPLNSTKSFSVKILDENDNPPHFTKAMYVLQVS------ENNIPGEYLGSVLAQDPDLGHNGTVSYSILPSHV---------GDVSIYTFVSVNPT-NGAIYALRSFNYEQTKYFEFKVLAKDSGSPHLESNATVRVSVLDVNDNAPVICLPTLQNDTAEIHVPRNVGVGYLITTVRAMDNDFGESGRLTYEIV-YGNEDH--LFEIDSVTGEIKTLTPYWDEVSPVVELVIKVTDNGKPS-LSAVAKLIIK 657
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Xenopus
Match: PCDH17 (protocadherin 17 [Source:NCBI gene;Acc:100485388]) HSP 1 Score: 203.371 bits (516), Expect = 9.335e-53 Identity = 193/638 (30.25%), Postives = 295/638 (46.24%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL----AKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILV----TDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP-----QFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE 2111
L +D DS + +KQ IDRE LC QL+ ++ N++E+ I+V + D NDN+P FP Q I EN G R PL A D D + +Y + DF L K DG P L+I LDRE+ S + L A+DG + R + +I +K+ D NDN+P FE Y+ I EN P+ +I++ TD DE NG + + I ++F++D G +Q + NLDYE+ E + A+D G N + + +++++ ND +P I FV Q +I E ++A V+V+D DS N QL C +L N+ F+ N +++ T + +DRE I + VT+ D + PLN+ S + I D NDNPP FT+ +Y Q+ EN E ++ A D DL NG V+Y I + S + ++ NG IY +SF++E+ + F V+A D G P+ L S++T+ V + D NDNAP V NV +G+LI + A D D + IV + + L +D +TG+I+T P E + + ++
Sbjct: 65 LLDVDQDSGVLYTKQRIDRESLCRRSPKCQLS--------------LEVFANDKEI--CMIKVDILDINDNSPNFPSEQIDI-DISENASPGTRFPLTSAHDPDAGENGLKTYVI-------TRDDFGLFSLDVKSRGDGTKFPELVIQKELDREEQSHHKLILTALDGGDPPR-SATIQINVKVIDSNDNSPVFEALSYMVEIPEN---SPLGRIVIDLNATDADEGSNGEVVYSFSGYAPDRIRELFSID---SKTGIIQVK----GNLDYEE-NGLIEIDVQARDQGPNPIPKHCKVTVKVIDKNDNAPSISFVSVRQG-----AISEAAPPGTVIALVRVTDKDSGKNGQLICRVLG--NV------PFKLEENYDNLYTVVTDRPLDRE------IQDEYNVTIIARD-NGSPPLNSTKSFSVKILDENDNPPHFTKAMYVLQVSENNIPGEYL--GSVLAQDPDLGHNGTVSYSILPSHVGDVSIYTFVSVNPTNGAIYALRSFNYEQTKYFEFKVLAKDSGSPH-LESNATVRVSVLDVNDNAPVICLPTLQNDTAEIHVPRNVGVGYLITTVRAMDNDFGESGRLTYEIVYGNEDH----LFEIDSVTGEIKTLTPYWDEVSPVVELVIK 639 HSP 2 Score: 90.8929 bits (224), Expect = 7.767e-18 Identity = 144/582 (24.74%), Postives = 242/582 (41.58%), Query Frame = 3
Query: 591 KLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIK--------------IRDINDNAPKFERPIYIRTIKENVIVDPIFQILVT-DEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQ---LQCSLLTPRNILMIEESRFRHPVNI-YKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFT-QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRAS--KLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQ 2258
KL +P + G S+F + ++ P+L LD ++ S +T ID R + K +++++ I DINDN+P F I EN F + D D ENG LK + ++ +F+LD+ + G ++ LD E+ H + + A DGG S+T + +++++ ND SP + ++ I E + +I+ + +DAD N S P R R +I K ++ N+D E N ID VQ D N IP + ++ +I D NDN P + +V G I E V A + DKD NG++ + + F+++ +Y + D E + Y+ ++A D G P L+S+ + V+I D+NDN P F+++ + V EN G +G + A D D L + + + + S ++++P G I + E+T F V +K+ L A + ++V D+ND+ P +I L TLQ
Sbjct: 43 KLGIPER-GRKSNFRV---LENSAPHL-----LDVDQDSGVLYTKQRIDRESLCRRSPKCQLSLEVFANDKEICMIKVDILDINDNSPNFPSEQIDIDISENASPGTRFPLTSAHDPDAGENG---LKTYVITRDDFG-LFSLDVKSRGDGTKFPELVIQKELDREEQSH-HKLILTALDGGDPPRSATIQINVKVIDSNDNSPVF------EALSYMVEIPENSPLGRIVIDLNATDADEGSNGEVVYSFSGYAP--------DRIRELFSIDSKTGIIQVKGNLDYEENGLIEID------VQARDQGPNPIPKHCKVTVKVI--DKNDNAPSISFVSVRQGAISEAAPPGTVI--ALVRVTDKDSGKNGQLICRVL------GNVPFKLEENYDNLYTVVTDRPLDREIQDEYNVTIIARDNGSP-PLNSTKSFSVKILDENDNPPHFTKAMYVLQVSENNIPGEYLGSVLAQDPD-LGHNGTVSYSILPSHVGDVSIYTFVSVNPTNGAIYALRSFNYEQTKYFEFKVLAKDSGSPH--LESNATVRVSVLDVNDNAP------------VICLPTLQ 564 HSP 3 Score: 79.7221 bits (195), Expect = 2.515e-14 Identity = 86/311 (27.65%), Postives = 142/311 (45.66%), Query Frame = 3
Query: 1371 LRTTQNIDREA---NEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQN-GKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIP 2285
L T Q IDRE+ P K ++++ D EI + I + I D+NDN P F I EN + F + H D D NG TY I DF S + R D ++ + D E++S + I+ A D G P R S++ I V++ D NDN+P F + + EN +G ++ +NATD D + ++ + + +R +L ++D TG I+ + +D E+ I V++++ N + + + + V D ND+ P+ IS +++QG I E+ P
Sbjct: 75 LYTKQRIDRESLCRRSP-----KCQLSLEVFANDKEICM-----IKVDILDINDNSPNFPSEQIDIDISENASPGTRFPLTSAH--DPDAGENGLKTYVITRDDFGLFSLDVKSRGDGTKFPELVIQKELDREEQSHHKLILTALDGGDPPR-SATIQINVKVIDSNDNSPVFEALSYMVEIPENSPLGRIVIDLNATDADE-GSNGEVVYSFSGYAPDRIRELFSIDSKTGIIQVKGNLDYEENGLIEIDVQARDQGP--NPIPKHCKVTVKVIDKNDNAPS------------ISFVSVRQGAISEAAP 357 HSP 4 Score: 70.0922 bits (170), Expect = 1.797e-11 Identity = 132/557 (23.70%), Postives = 228/557 (40.93%), Query Frame = 3
Query: 252 GLFILDSDS--------NLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNAT-----FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGK-TEITIKIRDINDNAPKFERPIYIRTIKENVIVDP------IFQILVTDEDEDENGRIDLKMHNSG----QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKF---TQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVR 1838
GLF LD S L + K++DREE +++L LD + +Q I V V D NDN+PVF + I EN PLG + A D D + +S S Y + +L + K G+ + + LD E+ + + A D +G K ++T+K+ D NDNAP I ++++ I + I + VTD+D +NG++ ++ + +E + ++T+ + D+ + + ++ + I+A+D G L+ST + ++IL+ ND P Q++ E + + L V D D N + P ++ V+IY S+ T N A F + + D+ P L +NA++ + + DVNDN P T +I N ++ + A D D +G++TY I + N + F IDS G+I + E + ++ TD G P+ LS+ + +I++
Sbjct: 168 GLFSLDVKSRGDGTKFPELVIQKELDREEQSHHKLILT-------------ALDGGDPPRSATIQ---INVKVIDSNDNSPVFEALSY-MVEIPENSPLGRIVIDLNATDADEGSNGEVVYSFSGYAPDRIREL-------FSIDSKTGI--IQVKGNLDYEENGLIEIDVQARD--QGPNPIPKHCKVTVKVIDKNDNAPS----ISFVSVRQGAISEAAPPGTVIALVRVTDKDSGKNGQLICRVLGNVPFKLEENYDNLYTV-VTDRPLDR--------------EIQDEYNVTIIARDNGSPPLNSTKSFSVKILDENDNPPHFTKAMYVLQVS------ENNIPGEYLGSVLAQDPDLGHNGTVSYSILPSHV---------GDVSIYTFVSVNPT-NGAIYALRSFNYEQTKYFEFKVLAKDSGSPHLESNATVRVSVLDVNDNAPVICLPTLQNDTAEIHVPRNVGVGYLITTVRAMDNDFGESGRLTYEIV-YGNEDH--LFEIDSVTGEIKTLTPYWDEVSPVVELVIKVTDNGKPS-LSAVAKLIIK 657
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Xenopus
Match: ENSXETT00000027853.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:3:18074243:18087174:1 gene:ENSXETG00000012517.1 transcript:ENSXETT00000027853.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 194.897 bits (494), Expect = 6.667e-51 Identity = 164/549 (29.87%), Postives = 272/549 (49.54%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTP-YCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQIL-VTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQD--FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQ-FSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIR 2057
I V + D NDN P+F QT I EN P G +I + A D D S +Y L+ P K S L++ LDREK + + TL A D R +G T+I I ++D+NDNAP F PIY +I EN V + +L TD DE ENG I+ + G + ++F ++ K +V LDYE + +E + A+D + ++ + + + +VND PEI+ ++G ++ E + ++A V+D DS N Q++C + P N+ +S+F + +SL N+DRE+ + V DN IP L+T A I+ ++D+NDNPP FT+ +Y+ I ENI + + A+DKD N ++ Y + + + S + + I+ +G +++ SFD+EK ++ V D G P+ LS+++ I V I+DQND++P+ S + V ++++GHL+ ++ A D D+ + + D + + L ++D +G+IR
Sbjct: 73 INVEISDVNDNAPLFQ--QTADTIFIRENNPPGSQIYIVSASDSDTGQNSFITYSLKSPSKDNKSKSL-----------VLVLNQALDREKQASHLLTLTAADCGTPKR-SGTTQIRILVQDVNDNAPTFRHPIYRVSIPENYAVGSLIVVLKATDLDEGENGVIEYSFSSIGSRSVKQLFKIE-------KNNGEVHLKGLLDYENKKY-YEIHVQAKDTAQLPMTGHCKVIVDVTDVNDNPPEIKI----SSLSG--AVKEDSSPGFVIALFTVTDRDSGPNGQVRCQI--PDNLPFYLDSKFSN------YYSLVLKDNLDRESVAEY--------NVPISATDNGIPALSTTAYIYFSVDDINDNPPLFTEELYFFSIAENILPGSLIFQ--VSASDKDSGKNAQLLYALLESYVEGMSVSHFISINPDSGNVFSVDSFDYEKMQMFQLQVEVKDHGLPS-LSNTANITVFIQDQNDHSPEVLSPVPTSEMVLRSMKVGHLVTKLRAVDADA---GYNAWLTYEMDPVSNTT-LFSVDSYSGEIR 570 HSP 2 Score: 94.7449 bits (234), Expect = 3.855e-19 Identity = 136/520 (26.15%), Postives = 228/520 (43.85%), Query Frame = 3
Query: 330 MMLQLNKVCGSIHTCCHILDFQIS-CNNEEMQSNF-IRVFVDDENDNNPVF--PIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKD-GVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQIL---VTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSP----EIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYK-QFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEV-FMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRI 1841
++L LN+ H+L + C + IR+ V D NDN P F PI + +I EN +G I + KA DLD V Y +G+ S +L K K+ G +L LD E Y + A D + TG ++ + + D+NDN P+ + +KE+ P F I VTD D NG++ ++ ++ + LD + V +NLD E + + I A D G +LS+TA + + ++ND P E+ F FSI E L ++ V SD DS N QL +LL +E H ++I ++ + + D E + F +Q + D+ +P L+ A+I + I D ND+ P+ V ++ + + +V + + A D D N +TY + SN F +DS +G+I +++ +E+++ +V+ D G P++ S+ +TI++ I
Sbjct: 138 LVLVLNQALDREKQASHLLTLTAADCGTPKRSGTTQIRILVQDVNDNAPTFRHPIYR---VSIPENYAVGSLIVVLKATDLDEGENGVIEYSFS---SIGSRSVKQLFKIEKNNGEVHL--KGLLDYENKKYYEIHVQAKDTAQLPM-TGHCKVIVDVTDVNDNPPEIKISSLSGAVKEDS--SPGFVIALFTVTDRDSGPNGQVRCQIPDNLPFY---------LDSKFSNYYSLVLK-DNLDRESVAE-YNVPISATDNGIPALSTTAYIYFSVDDINDNPPLFTEELYF----------FSIAENILPGSLIFQVSASDKDSGKNAQLLYALLES----YVEGMSVSHFISINPDSGNVFSVDSFDYEKMQMF--------QLQVEVKDHGLPSLSNTANITVFIQDQNDHSPEVLSPVPTSEMV--LRSMKVGHLVTKLRAVDADAGYNAWLTYEMDPV---SNTTLFSVDSYSGEIRIARNIKETEENMHKLVVIVRDHGQPSK-STLATIMINI 607 HSP 3 Score: 90.5077 bits (223), Expect = 8.173e-18 Identity = 103/391 (26.34%), Postives = 157/391 (40.15%), Query Frame = 3
Query: 1059 FEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQ-LQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNAS-IFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHK-------DIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
++ I A+D G SLS + T+ ++I +VND +P QQ I E + V SD+D+ N + SL +P N K L Q +DRE L+ + C P + + I I++ DVNDN P F +Y I EN + + + A D D NG + Y + S F+I+ NG+++ D+E + Y V A D ++ +IV + D NDN P+ S + V E+ G +I TDRDS P + ++ F + S N S L+ D L DRE + + + + L A I +V D+ND+PP F
Sbjct: 53 YQVVITAKDEGSPSLSISMTINVEISDVNDNAPLF------QQTADTIFIRENNPPGSQIYIVSASDSDTGQNSFITYSLKSPSKD------------NKSKSLVLVLNQALDREKQASHLL---TLTAADCG-----TPKRSGTTQIRILVQDVNDNAPTFRHPIYRVSIPENYAVGSLIV--VLKATDLDEGENGVIEYSFSSIGSRSVKQLFKIEKNNGEVHLKGLLDYENKKYYEIHVQAKDTAQL-PMTGHCKVIVDVTDVNDNPPEIKISSLSGAVKEDSSPGFVIALFTVTDRDSGPNGQVRCQIPDNLPFYLDSKFSNYYS-LVLKDNL----------DRESVAEYNVPISATDNG--IPALSTTAYIYFSVDDINDNPPLF 401 HSP 4 Score: 82.8037 bits (203), Expect = 2.140e-15 Identity = 82/324 (25.31%), Postives = 149/324 (45.99%), Query Frame = 3
Query: 1365 FSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEEN-INNHEVFMNAAIHAADKDLHLNGKVTYHIQDFK--NSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL-------KDPSKSQLIISLETLQ------QGQICESIP 2285
FSL +DRE + ++++T + D P L+ + +I + I+DVNDN P F Q I EN ++++ + A+D D N +TY ++ N S ++ ++ Q+ D EK++ + + A D G P R S ++ I + ++D NDNAP F + + EN +G LI + ATD D E+ I + S +L ++ G++ + +D E V++K+ +++ + +++ V D+ND+PP ++ K+ S +I+L T+ GQ+ IP
Sbjct: 37 FSLAVDAPLDRENKSEY----QVVITAK----DEGSPSLSISMTINVEISDVNDNAPLFQQTADTIFIRENNPPGSQIYI---VSASDSDTGQNSFITYSLKSPSKDNKSKSLVLVLN---------QALDREKQASHLLTLTAADCGTPKR-SGTTQIRILVQDVNDNAPTFRHPIYRVSIPENYAVGSLIVVLKATDLDE-GENGVIEYSFSSIGSRSVKQLFKIEKNNGEVHLKGLLDYENKKYYEIHVQAKDTAQL--PMTGHCKVIVDVTDVNDNPPEIKISSLSGAVKEDSSPGFVIALFTVTDRDSGPNGQVRCQIP 336
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Mouse
Match: Pcdh17 (protocadherin 17 [Source:MGI Symbol;Acc:MGI:2684924]) HSP 1 Score: 222.631 bits (566), Expect = 6.467e-59 Identity = 194/644 (30.12%), Postives = 296/644 (45.96%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILV----TDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFV--RNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQF----SLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTY-----HIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNA-----PQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE 2111
L +D+DS L +KQ IDRE LC + N C L ++ N++E+ I+V + D NDN P FP Q I EN G R PL A D D + +Y L + F L K DG P L+I LDRE + +T L A+DG E R + +I +K+ D NDN+P FE P Y+ + EN P+ +++ TD DE NG + + + + ++F++D +R NLDYE+ E + A+D G N + + + +++++ ND +P I FV R G ++ E ++A V+V+D DS N QLQC +L P + + + ++ T + +DRE + + VT+ D PLN+ S + I D NDNPP+FT+ +Y Q+ EN E ++ A D DL NG V+Y HI D S Y ++ NG IY +SF++E+ + F V+A D G P L S++T+ V + D NDNA P V N +G+L+ + A D D + IV + + L +DP +G+IRT +P + T + V+
Sbjct: 75 LLDVDADSGLLYTKQRIDRESLC------RHNAKCQ--------LSLEVFANDKEI--CMIKVEIQDINDNAPSFPSDQIEM-DISENAAPGTRFPLTSAHDPDAGENGLRTYLL----TRDDHGLFALDVKSRGDGTKFPELVIQKALDRELQNHHTLVLTALDGGEPPR-SATVQINVKVIDSNDNSPVFEAPSYLVELPENA---PLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSID-------PKTGLIRVKGNLDYEE-NGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG-------ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGLGGPGSVPFKLEENYDNFYTVVTDRPLDRETQDEY------NVTIVARD-GGSPPLNSTKSFAVKILDENDNPPRFTKGLYVLQVHENNIPGEYL--GSVLAQDPDLGQNGTVSYSILPSHIGDV---SIYTYVSVNPTNGAIYALRSFNYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDH----LFEIDPSSGEIRTLHPFWEDVTPVVELVVK 662 HSP 2 Score: 92.0485 bits (227), Expect = 2.610e-18 Identity = 127/499 (25.45%), Postives = 206/499 (41.28%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVT-DEDEDENG-RIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE-QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQ---LQCSLLTPRNILMIEESRFRHPVNIYKQFSL-RTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFT-QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI------QDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRAS--KLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
I ++I+DINDNAP F I EN F + D D ENG R L + + +F LD+ + G ++ LD E Q +H+ + A DGG S+T + +++++ ND SP + + + E ++ + +DAD N S P R R +I + L R N+D E N ID VQ D N IP + ++ +I D NDN P +V G + E V A + D+D NG++ + ++ F+++ Y + D E + Y+ +VA D G P L+S+ + V+I D+NDN P+F++ + V EN G +G + A D D L ++ + + + S ++++P G I + E+T F V +K+ S L A + +TV D+ND+ P L
Sbjct: 119 IKVEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDD-----HGLFALDVKSRGDGTKFPELVIQKALDRELQNHHTL--VLTALDGGEPPRSATVQINVKVIDSNDNSPVF------EAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVP--------DRVRELFSIDPKTGLIRVKGNLDYEENGMLEID------VQARDLGPNPIPAHCKVTVKLI--DRNDNAPSIGFVSVRQGALSEAAPPGTVI--ALVRVTDRDSGKNGQLQCRVLGGGGTGGGLGGPGSVPFKLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPP-LNSTKSFAVKILDENDNPPRFTKGLYVLQVHENNIPGEYLGSVLAQDPD-LGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNYEQTKAFEFKVLAKD-SGAPAHLESNATVRVTVLDVNDNAPVIVL 583
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Mouse
Match: Pcdhgc4 (protocadherin gamma subfamily C, 4 [Source:MGI Symbol;Acc:MGI:1935203]) HSP 1 Score: 214.157 bits (544), Expect = 9.839e-57 Identity = 182/585 (31.11%), Postives = 280/585 (47.86%), Query Frame = 3
Query: 243 INNGLFILDSDSN-LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDG--VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIF-QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNS--SNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF------SQSHFAFFVDENVEIGHLIGQINATDRDS 1958
+N F +D DS L + IDRE LC G +C L+F ++ EM + + D ND+ P FP Q I E P G R PL KAQD D + S+SSY+L ++ F L K DG VP L++ LDREK S Y L A+DG R +G E+ + + D+NDNAP F++ Y ++ E+ + Q+ +D D +G + + + +F+ L + GK+ Q LD+E + +EF + A+DGG ++ +LR+ +L+VND +P I ++ E ++A + V D DS N SL P ++ +S FR+ QFSL T +DREA S + V D N PL+T+ +IF+ I+DVNDNPP F Q + + E NN + ++ A+D D LN ++Y + + +N S + + ++ Q G ++ ++SFD+E+ F V A D+G P LSS+ T+ + + D NDNAP S + +V GHL+ ++ A D DS
Sbjct: 73 VNQRHFRVDLDSGALLIKNPIDREALC------------GLSASCIVPLEF-VTEGPLEMYRAEVEIV--DVNDHAPRFPRQQL-DLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLS------SNEHFALDVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPR-SGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFS---LHPTTGKLTLQ----GPLDFESENY-YEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPHITVTSELG------TLPESAEPGTVVALISVQDPDSGSNG-DVSLRIPDHLPFALKSAFRN------QFSLVTAGPLDREAR------SSYDIMVTASDAGNP-PLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPE--NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGSPP-LSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLVTKVTAVDLDS 603 HSP 2 Score: 124.79 bits (312), Expect = 2.062e-28 Identity = 158/595 (26.55%), Postives = 247/595 (41.51%), Query Frame = 3
Query: 522 LGY-----RIPLPK-----------AQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFK----DGVPYLIITSTLDREK-TSMYTFTLIAIDGV-EGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQI-LVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLR-TTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSL-----------PEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPT 2201
LGY R P+P+ AQD T S+S+ +L++ ++ +HF+ G L+I + +DRE + ++ ++ V EG + E+ +I D+ND+AP+F R I E F + D D N ++ + N+ F LD+ +S G + ++ LD E+ + + A DGG S TA LR+ +L+VND +P QQ + S+ E + +L + SD D L P + S P + FSL TT + + F ++ V+ D + + + S+ + + DVNDN P T G + E+ V A I D D NG V+ I D + FR + + D E S Y +V A+D G+P LS+ TI + I D NDN P F Q FV EN G L+ + A+D DS P ++D+ AS I+L+P TG + D E+T T+ F V++++ R L + + V DLND+ P
Sbjct: 27 LGYVYGQIRYPVPEESQEGTFVGNVAQDFLLDTESLSARRLQVAGEVNQ-------RHFRVDLDSGA--LLIKNPIDREALCGLSASCIVPLEFVTEGPLEMYRAEV--EIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSS------NEHFALDVKKRSDGSLVPELLLEKPLDREK-QSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAF------QQSSYRISVLESAPAGMVLIQLNASDPD----------LGPSGNVTFSFSG-HTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDVRARDGGSPA-MEQHCSLRVDLLDVNDNAPHITVTSELGTLPESAEPGTVV--ALISVQDPDSGSNGDVSLRIPDHLPFALKSAFR---NQFSLVTAGPLDREARSSYDIMVTASDAGNPP-LSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDV----------SASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARD--RGSPPLSSTVTVRLFVLDLNDNAPA 567 HSP 3 Score: 93.5893 bits (231), Expect = 8.930e-19 Identity = 98/369 (26.56%), Postives = 164/369 (44.44%), Query Frame = 3
Query: 1125 IQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS---------LPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
++I++VND +P RF R QQ+ I E + + DAD N + L+ ++ + R ++ + L + +DRE D ++++T D N P + A + + + DVNDN P F Q+ Y + E+ V + ++A+D DL +G VT+ F + GK+ DFE E+ Y F V A D G P + ++ V + D NDNAP + + + E+ E G ++ I+ D DS +P+H + F +KS +N+ S L+T PL + R+ Y I + ++ NP L I + + D+ND+PP+F
Sbjct: 124 VEIVDVNDHAP--RFPR--QQLD--LEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFALDVKK-RSDGSLVPELLLE--KPLDREKQS----DYRLVLTAV--DGGNP-PRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQ--LNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDVRARDGGSPA-MEQHCSLRVDLLDVNDNAPHITVTSELGTLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDH--LPFALKSAFRNQFS-LVTAGPLDREARSSYDI-------MVTASDAGNPP-----LSTHRTIFLNISDVNDNPPSF 458
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Mouse
Match: Pcdh10 (protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]) HSP 1 Score: 196.052 bits (497), Expect = 5.372e-51 Identity = 185/650 (28.46%), Postives = 305/650 (46.92%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIE--ENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGVPY--LIITSTLDREKTSMYTFTLIAIDGVEG------------------NRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEEN-INNHEVFMNAAIHAADKDLHLNGKVTYHIQD--FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF-------SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRT--RYPIDREKTSTITFFVESKN 2120
L V+++IDRE++C + + C +L ++ N ++ + + V D NDN P FP P T+E E+ G R PL A D D T S+ Y++ +S F L + DG + L++ LDRE+ +++ + L A+DG G + TG +TI++ D NDN P F++P+Y ++ EN + Q+ TD DE +NG + + ++F L G+++ LDYE+ ++ + A+D G N++ + + +++L+ ND +PEI F T ++ EG ++A V+D DS N Q+QC LL + FR + +++ T +DREA DS + V D E L+T+ SI + ++DVNDN P+F+Q VY + EN + ++ A+ A D+D N K+TY I + + S Y I+S NG +Y +SFD+E+ +SF V A D G P L+ ++T+ + I DQNDNAP + + + + E G+L+ ++ A D D + IV+ + N L LD TG++RT R P R+ +E ++
Sbjct: 73 LYVNEKIDREQIC------KQSPSC--------VLHLEVFLENP-LELFRVEIEVLDINDNPPSFP---EPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEIT------PNSYFSLDVQTQGDGNRFAELVLEKPLDREQQAVHRYVLTAVDGGGGGGGGEGGGGGGGAGLPPQQQRTGTALLTIRVLDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRARELFGLS---PRTGRLEVS----GELDYEE-SPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFS------TVKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLG--------DVPFRLKSSFKNYYTIVTEAPLDREAG-----DSYTLTVVARDR--GEPALSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGAYIY---AVSATDRDEGANAKLTYSILECQIQGMSVFTYVSINSDNGYLYALRSFDYEQIKDFSFQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLLTRVAAVDADDGENARLTYSIVRGNEMN----LFRLDWRTGELRTARRVPAKRDPQRPYELVIEVRD 662 HSP 2 Score: 55.0694 bits (131), Expect = 5.869e-7 Identity = 71/249 (28.51%), Postives = 105/249 (42.17%), Query Frame = 3
Query: 423 SNFIRVFVDDENDNNPVF--PIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIR--TIKENVI---VDPIF---QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILN 1139
S I+V V D NDN P F P+ Y T E N P Y I A D D + +Y + L ++ S F D YL + D E+ ++F + A D G + I I D NDNAP P+ R T V+ +P + ++ D D+ EN R+ + + L LD G+++ R D ++ Y E I +D G+ LSSTATL +Q+++
Sbjct: 446 SKSIQVQVSDVNDNAPRFSQPVYDV-YVT-ENNVPGAY-IYAVSATDRDEGANAKLTYSI-LECQIQGMSVFTYVSINSDNG-YLYALRSFDYEQIKDFSFQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLLTRVAAVDADDGENARLTYSIVRGNE------MNLFRLDWRTGELRTARRVPAKRDPQRPY---ELVIEVRDHGQPPLSSTATLVVQLVD 680
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 194.126 bits (492), Expect = 1.849e-50 Identity = 197/675 (29.19%), Postives = 304/675 (45.04%), Query Frame = 3
Query: 291 SKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYC--TIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL---AKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEI-TIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIY-KQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN---PSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQL-IISLETLQQGQICE 2276
S +IDRE+LC + N+ C L+ I N+ + I++ V D NDN P+FP +P +I EN + R P+P A D D V Y+L L S F L + P LI+ LDRE+ Y + DG G T I + + D+NDN P F+ I EN V + Q+ TD D N I ++F L+ + G + Q +LD E+ + ++A DG +S + AT+ I + +VND P I I G + E N +A + VSD D+ +N + I IE H +Y Q+ L T+ +D E + F KI+ + D+ P LN A + + + D NDNPP F Q V + EN N +++ I A D+D N + Y + NA +F +D + G + S+ F+ E++ + F V A D G P L S + +IV + D+NDN+P+F+ +HF FFV EN+ +G I TD D+ E+K + + +D++N LDP +G I++ DRE+ S+ TF V++ + P R A + I V D+ND+ P + PS + ++ L + + E
Sbjct: 89 SNRIDREKLCAGASYAEENE-------CFFELEVVI-LPNDFFRLIKIKIIVKDTNDNAPMFP---SPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-----LNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDG--GTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALN---NTTGLITVQ----RSLDREET-AIHKVTVLASDG--SSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNG--------KVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSF--KIVAS------DSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSEN-NRRGLYL-TTISATDEDSGKNADIVYQL-----GPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTP-PLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDEDA-GENKAVTLSILNDNEN-----FVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPR-----SSTAKVTINVMDVNDNSPVV-ISPPSNTSFKLVPLSAIPGSVVAE 699
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Mouse
Match: Pcdh10 (protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]) HSP 1 Score: 195.282 bits (495), Expect = 2.316e-50 Identity = 185/650 (28.46%), Postives = 305/650 (46.92%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIE--ENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGVPY--LIITSTLDREKTSMYTFTLIAIDGVEG------------------NRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQI-EENINNHEVFMNAAIHAADKDLHLNGKVTYHIQD--FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF-------SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRT--RYPIDREKTSTITFFVESKN 2120
L V+++IDRE++C + + C +L ++ N ++ + + V D NDN P FP P T+E E+ G R PL A D D T S+ Y++ +S F L + DG + L++ LDRE+ +++ + L A+DG G + TG +TI++ D NDN P F++P+Y ++ EN + Q+ TD DE +NG + + ++F L G+++ LDYE+ ++ + A+D G N++ + + +++L+ ND +PEI F T ++ EG ++A V+D DS N Q+QC LL + FR + +++ T +DREA DS + V D E L+T+ SI + ++DVNDN P+F+Q VY + E N+ ++ A+ A D+D N K+TY I + + S Y I+S NG +Y +SFD+E+ +SF V A D G P L+ ++T+ + I DQNDNAP + + + + E G+L+ ++ A D D + IV+ + N L LD TG++RT R P R+ +E ++
Sbjct: 73 LYVNEKIDREQIC------KQSPSC--------VLHLEVFLENP-LELFRVEIEVLDINDNPPSFP---EPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEIT------PNSYFSLDVQTQGDGNRFAELVLEKPLDREQQAVHRYVLTAVDGGGGGGGGEGGGGGGGAGLPPQQQRTGTALLTIRVLDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRARELFGLS---PRTGRLEVS----GELDYEE-SPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFS------TVKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLG--------DVPFRLKSSFKNYYTIVTEAPLDREAG-----DSYTLTVVARDR--GEPALSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGAYIY---AVSATDRDEGANAKLTYSILECQIQGMSVFTYVSINSDNGYLYALRSFDYEQIKDFSFQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLLTRVAAVDADDGENARLTYSIVRGNEMN----LFRLDWRTGELRTARRVPAKRDPQRPYELVIEVRD 662 HSP 2 Score: 55.0694 bits (131), Expect = 6.285e-7 Identity = 71/249 (28.51%), Postives = 105/249 (42.17%), Query Frame = 3
Query: 423 SNFIRVFVDDENDNNPVF--PIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIR--TIKENVI---VDPIF---QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILN 1139
S I+V V D NDN P F P+ Y T E N P Y I A D D + +Y + L ++ S F D YL + D E+ ++F + A D G + I I D NDNAP P+ R T V+ +P + ++ D D+ EN R+ + + L LD G+++ R D ++ Y E I +D G+ LSSTATL +Q+++
Sbjct: 446 SKSIQVQVSDVNDNAPRFSQPVYDV-YVT-ENNVPGAY-IYAVSATDRDEGANAKLTYSI-LECQIQGMSVFTYVSINSDNG-YLYALRSFDYEQIKDFSFQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLLTRVAAVDADDGENARLTYSIVRGNE------MNLFRLDWRTGELRTARRVPAKRDPQRPY---ELVIEVRDHGQPPLSSTATLVVQLVD 680
BLAST of Protocadherin 2 gamma c6 sCP1 vs. UniProt/SwissProt
Match: sp|O14917|PCD17_HUMAN (Protocadherin-17 OS=Homo sapiens OX=9606 GN=PCDH17 PE=1 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 4.462e-57 Identity = 196/647 (30.29%), Postives = 296/647 (45.75%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILV----TDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRF--VRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESR-------FRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTY-----HIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNA-----PQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE 2111
L +D+DS L +KQ IDRE LC + N C L ++ N++E+ I+V + D NDN P F Q I EN G R PL A D D + +Y L + F L K DG P L+I LDRE+ + +T L A+DG E R + +I +K+ D NDN+P FE P Y+ + EN P+ +++ TD DE NG + + + + ++F++D +R NLDYE+ E + A+D G N + + + +++++ ND +P I F VR G ++ E ++A V+V+D DS N QLQC +L F+ N +++ T + +DRE + + VT+ D PLN+ S I I D NDNPP+FT+ +Y Q+ EN E ++ A D DL NG V+Y HI D S Y ++ NG IY +SF+FE+ + F V+A D G P L S++T+ V + D NDNA P V N +G+L+ + A D D + IV + + L +DP +G+IRT +P + T + V+
Sbjct: 74 LLDVDADSGLLYTKQRIDRESLC------RHNAKCQ--------LSLEVFANDKEI--CMIKVEIQDINDNAPSFSSDQIEM-DISENAAPGTRFPLTSAHDPDAGENGLRTYLL----TRDDHGLFGLDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPR-SATVQINVKVIDSNDNSPVFEAPSYLVELPENA---PLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSID-------PKTGLIRVKGNLDYEE-NGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG-------ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEY------NVTIVARD-GGSPPLNSTKSFAIKILDENDNPPRFTKGLYVLQVHENNIPGEYL--GSVLAQDPDLGQNGTVSYSILPSHIGDV---SIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDH----LFEIDPSSGEIRTLHPFWEDVTPVVELVVK 664 HSP 2 Score: 92.0485 bits (227), Expect = 1.973e-17 Identity = 126/501 (25.15%), Postives = 204/501 (40.72%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVT-DEDEDENG-RIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQ---LQCSLLTPRNILMIEESRFRHPVNIYKQFSL-RTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFT-QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI---------QDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRAS--KLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
I ++I+DINDNAP F I EN F + D D ENG R L + + +F LD+ + G ++ LD EQ H + A DGG S+T + +++++ ND SP + + + E ++ + +DAD N S P R R +I + L R N+D E N ID VQ D N IP + ++ +I D NDN P +V G + E V A + D+D NG++ + ++ F+++ Y + D E + Y+ +VA D G P L+S+ + ++I D+NDN P+F++ + V EN G +G + A D D L ++ + + + S ++++P G I + E+T F V +K+ S L A + +TV D+ND+ P L
Sbjct: 118 IKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDD-----HGLFGLDVKSRGDGTKFPELVIQKALDREQQNH-HTLVLTALDGGEPPRSATVQINVKVIDSNDNSPVF------EAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVP--------DRVRELFSIDPKTGLIRVKGNLDYEENGMLEID------VQARDLGPNPIPAHCKVTVKLI--DRNDNAPSIGFVSVRQGALSEAAPPGTVI--ALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPP-LNSTKSFAIKILDENDNPPRFTKGLYVLQVHENNIPGEYLGSVLAQDPD-LGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKD-SGAPAHLESNATVRVTVLDVNDNAPVIVL 585 HSP 3 Score: 87.4261 bits (215), Expect = 4.904e-16 Identity = 80/314 (25.48%), Postives = 145/314 (46.18%), Query Frame = 3
Query: 1371 LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQ---------DFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIP 2285
L T Q IDRE+ ++K ++++ D EI + I + I D+NDN P F+ + I EN F + H D D NG TY + D K+ + F ++ ++ D E+++ ++ ++ A D G P R S++ I V++ D NDN+P F + + EN +G ++ +NATD D P + ++ + S +R +L ++DP TG IR + +D E+ + V++++ N + + + + D ND+ P+ I +++QG + E+ P
Sbjct: 84 LYTKQRIDRESL--CRHNAKCQLSLEVFANDKEICM-----IKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAH--DPDAGENGLRTYLLTRDDHGLFGLDVKSRGDGTKFP------ELVIQKALDREQQNHHTLVLTALDGGEPPR-SATVQINVKVIDSNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGP-NGEVLYSFSSYVPDRVRELFSIDPKTGLIRVKGNLDYEENGMLEIDVQARDLGP--NPIPAHCKVTVKLIDRNDNAPS------------IGFVSVRQGALSEAAP 366 HSP 4 Score: 77.411 bits (189), Expect = 5.850e-13 Identity = 124/506 (24.51%), Postives = 207/506 (40.91%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIE--ENKPLGYRIPLPKAQDLDNAT-----FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP------IFQILVTDEDEDENGRIDLKMHNSG-------------------QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP--LNTNASIFIIINDVNDNPPKF---TQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVR 1838
I V V D NDN+PVF + P +E EN PLG + A D D +S SSY + +L + K G+ + + LD E+ M + A D + N ++T+K+ D NDNAP I ++++ + + I + VTD D +NG++ ++ G +E + +T+ + D+ + + + + IVA+DGG L+ST + I+IL+ ND P RF + G + + E + + L V D D N + P +I V+IY S+ T N A F + + D+ P L +NA++ + + DVNDN P T +++ N ++ + + A D D +G++TY I D ++ F ID +G+I F + + +V TD G P LS+ + +I+R
Sbjct: 229 INVKVIDSNDNSPVF---EAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVREL-------FSIDPKTGL--IRVKGNLDYEENGMLEIDVQARD-LGPNPIPAHCKVTVKLIDRNDNAPS----IGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDNFYTV-VTDRPLDR--------------ETQDEYNVTIVARDGGSPPLNSTKSFAIKILDENDNPP--RFTK-GLYV---LQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHI---------GDVSIYTYVSVNPT-NGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVD---GNDDHLFEIDPSSGEIRTLHPFWEDVTPVVELVVKVTDHGKPT-LSAVAKLIIR 682
BLAST of Protocadherin 2 gamma c6 sCP1 vs. UniProt/SwissProt
Match: sp|Q5DRA3|PCDGL_PANTR (Protocadherin gamma-C4 OS=Pan troglodytes OX=9598 GN=PCDHGC4 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.492e-55 Identity = 180/585 (30.77%), Postives = 279/585 (47.69%), Query Frame = 3
Query: 243 INNGLFILDSDSN-LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDG--VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIF-QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNS--SNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF------SQSHFAFFVDENVEIGHLIGQINATDRDS 1958
+N F +D DS L + IDRE LC G +C L+F ++ EM + + D ND+ P FP Q I E P G R PL KAQD D + S+SSY+L ++ F L K DG VP L++ LDREK S Y L A+DG R +G E+ + + D+NDNAP F++ Y ++ E+ + Q+ +D D +G + + + +F+L ++ + LD+E + +EF + A+DGG ++ +LR+ +L+VND +P I ++ E ++A + V D DS N SL P ++ +S FR+ QFSL T +DREA S + V D N PL+T+ +IF+ I+DVNDNPP F Q + + E NN + ++ A+D D LN ++Y + + +N S + + ++ Q G ++ ++SFD+E+ F V A D+G+P LSS+ T+ + + D NDNAP S + +V GHLI ++ A D DS
Sbjct: 70 VNQRHFRVDLDSGALLIKNPIDREALC------------GLSASCIVPLEF-VTEGPLEMYRAEVEIV--DVNDHAPRFPRQQL-DLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLS------SNEHFALDVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPR-SGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLH-------PTTGKLTLLGPLDFESENY-YEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPYITVTSELG------TLPESAEPGTVVALISVQDPDSGSNG-DVSLRIPDHLPFALKSAFRN------QFSLVTAGPLDREAK------SSYDIMVTASDAGNP-PLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPE--NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPP-LSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLITKVTAVDLDS 600 HSP 2 Score: 122.865 bits (307), Expect = 5.925e-27 Identity = 159/601 (26.46%), Postives = 248/601 (41.26%), Query Frame = 3
Query: 522 LGY-----RIPLPK-----------AQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFK----DGVPYLIITSTLDREK-TSMYTFTLIAIDGV-EGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQI-LVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQN-------IDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSL-----------PEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPT 2201
LGY R P+P+ AQD T S+S+ +L++ ++ +HF+ G L+I + +DRE + ++ ++ V EG + E+ +I D+ND+AP+F R I E F + D D N ++ + N+ F LD+ +S G + ++ LD E+ + + A DGG S TA LR+ +L+VND +P QQ + S+ E + +L + SD D L P + S P + FSL T +D E+ + D V+ D + + + S+ + + DVNDN P T G + E+ V A I D D NG V+ I D + FR + + D E +S Y +V A+D G+P LS+ TI + I D NDN P F Q FV EN G L+ + A+D DS P ++D+ AS I+L+P TG + D E+T T+ F V++++ R L + + V DLND+ P
Sbjct: 24 LGYVCGQIRYPVPEESQEGTFVGNVAQDFLLDTDSLSARRLQVAGEVNQ-------RHFRVDLDSGA--LLIKNPIDREALCGLSASCIVPLEFVTEGPLEMYRAEV--EIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSS------NEHFALDVKKRSDGSLVPELLLEKPLDREK-QSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAF------QQSSYRISVLESAPAGMVLIQLNASDPD----------LGPSGNVTFYFSG-HTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFD------VRARDGGSPA-MEQHCSLRVDLLDVNDNAPYITVTSELGTLPESAEPGTVV--ALISVQDPDSGSNGDVSLRIPDHLPFALKSAFR---NQFSLVTAGPLDREAKSSYDIMVTASDAGNPP-LSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDV----------SASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARD--RGNPPLSSTVTVRLFVLDLNDNAPA 564 HSP 3 Score: 93.2041 bits (230), Expect = 7.392e-18 Identity = 100/372 (26.88%), Postives = 165/372 (44.35%), Query Frame = 3
Query: 1125 IQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS---------LPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
++I++VND +P RF R QQ+ I E + + DAD N + L+ ++ + R ++ + L + +DRE D ++++T D N P + A + + + DVNDN P F Q+ Y + E+ V + ++A+D DL +G VT++ F + GK+ DFE E+ Y F V A D G P + ++ V + D NDNAP + + + E+ E G ++ I+ D DS +P+H + F +KS +N+ S L+T PL DRE S+ V ++ NP L I + + D+ND+PP+F
Sbjct: 121 VEIVDVNDHAP--RFPR--QQLD--LEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFALDVKK-RSDGSLVPELLLE--KPLDREKQS----DYRLVLTAV--DGGNP-PRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQ--LNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSPA-MEQHCSLRVDLLDVNDNAPYITVTSELGTLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDH--LPFALKSAFRNQFS-LVTAGPL----------DREAKSSYDIMVTASDAGNPP-----LSTHRTIFLNISDVNDNPPSF 455
BLAST of Protocadherin 2 gamma c6 sCP1 vs. UniProt/SwissProt
Match: sp|Q9Y5F7|PCDGL_HUMAN (Protocadherin gamma-C4 OS=Homo sapiens OX=9606 GN=PCDHGC4 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.492e-55 Identity = 180/585 (30.77%), Postives = 279/585 (47.69%), Query Frame = 3
Query: 243 INNGLFILDSDSN-LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDG--VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIF-QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNS--SNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF------SQSHFAFFVDENVEIGHLIGQINATDRDS 1958
+N F +D DS L + IDRE LC G +C L+F ++ EM + + D ND+ P FP Q I E P G R PL KAQD D + S+SSY+L ++ F L K DG VP L++ LDREK S Y L A+DG R +G E+ + + D+NDNAP F++ Y ++ E+ + Q+ +D D +G + + + +F+L ++ + LD+E + +EF + A+DGG ++ +LR+ +L+VND +P I ++ E ++A + V D DS N SL P ++ +S FR+ QFSL T +DREA S + V D N PL+T+ +IF+ I+DVNDNPP F Q + + E NN + ++ A+D D LN ++Y + + +N S + + ++ Q G ++ ++SFD+E+ F V A D+G+P LSS+ T+ + + D NDNAP S + +V GHLI ++ A D DS
Sbjct: 70 VNQRHFRVDLDSGALLIKNPIDREALC------------GLSASCIVPLEF-VTEGPLEMYRAEVEIV--DVNDHAPRFPRQQL-DLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLS------SNEHFALDVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPR-SGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLH-------PTTGKLTLLGPLDFESENY-YEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPYITVTSELG------TLPESAEPGTVVALISVQDPDSGSNG-DVSLRIPDHLPFALKSAFRN------QFSLVTAGPLDREAK------SSYDIMVTASDAGNP-PLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPE--NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPP-LSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLITKVTAVDLDS 600 HSP 2 Score: 122.865 bits (307), Expect = 5.925e-27 Identity = 159/601 (26.46%), Postives = 248/601 (41.26%), Query Frame = 3
Query: 522 LGY-----RIPLPK-----------AQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFK----DGVPYLIITSTLDREK-TSMYTFTLIAIDGV-EGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQI-LVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQN-------IDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSL-----------PEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPT 2201
LGY R P+P+ AQD T S+S+ +L++ ++ +HF+ G L+I + +DRE + ++ ++ V EG + E+ +I D+ND+AP+F R I E F + D D N ++ + N+ F LD+ +S G + ++ LD E+ + + A DGG S TA LR+ +L+VND +P QQ + S+ E + +L + SD D L P + S P + FSL T +D E+ + D V+ D + + + S+ + + DVNDN P T G + E+ V A I D D NG V+ I D + FR + + D E +S Y +V A+D G+P LS+ TI + I D NDN P F Q FV EN G L+ + A+D DS P ++D+ AS I+L+P TG + D E+T T+ F V++++ R L + + V DLND+ P
Sbjct: 24 LGYVCGQIRYPVPEESQEGTFVGNVAQDFLLDTDSLSARRLQVAGEVNQ-------RHFRVDLDSGA--LLIKNPIDREALCGLSASCIVPLEFVTEGPLEMYRAEV--EIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSS------NEHFALDVKKRSDGSLVPELLLEKPLDREK-QSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAF------QQSSYRISVLESAPAGMVLIQLNASDPD----------LGPSGNVTFYFSG-HTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFD------VRARDGGSPA-MEQHCSLRVDLLDVNDNAPYITVTSELGTLPESAEPGTVV--ALISVQDPDSGSNGDVSLRIPDHLPFALKSAFR---NQFSLVTAGPLDREAKSSYDIMVTASDAGNPP-LSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDV----------SASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARD--RGNPPLSSTVTVRLFVLDLNDNAPA 564 HSP 3 Score: 93.2041 bits (230), Expect = 7.392e-18 Identity = 100/372 (26.88%), Postives = 165/372 (44.35%), Query Frame = 3
Query: 1125 IQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS---------LPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
++I++VND +P RF R QQ+ I E + + DAD N + L+ ++ + R ++ + L + +DRE D ++++T D N P + A + + + DVNDN P F Q+ Y + E+ V + ++A+D DL +G VT++ F + GK+ DFE E+ Y F V A D G P + ++ V + D NDNAP + + + E+ E G ++ I+ D DS +P+H + F +KS +N+ S L+T PL DRE S+ V ++ NP L I + + D+ND+PP+F
Sbjct: 121 VEIVDVNDHAP--RFPR--QQLD--LEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFALDVKK-RSDGSLVPELLLE--KPLDREKQS----DYRLVLTAV--DGGNP-PRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQ--LNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSPA-MEQHCSLRVDLLDVNDNAPYITVTSELGTLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDH--LPFALKSAFRNQFS-LVTAGPL----------DREAKSSYDIMVTASDAGNPP-----LSTHRTIFLNISDVNDNPPSF 455
BLAST of Protocadherin 2 gamma c6 sCP1 vs. UniProt/SwissProt
Match: sp|Q9Y5G8|PCDG5_HUMAN (Protocadherin gamma-A5 OS=Homo sapiens OX=9606 GN=PCDHGA5 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.924e-50 Identity = 190/624 (30.45%), Postives = 308/624 (49.36%), Query Frame = 3
Query: 255 LFILDSDSN-LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLE--LPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQD--FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF-------SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRT-RYPIDRE 2081
LF L+ S L + +IDREELC + +C +++F I N+ M+ + V + D NDN P F + + EN G R+ LP A+D D S+ SY+L L F L S + K+ P L++ LDREK +++ L A+DG + +G T I + + D NDNAP F Y ++ EN+ V + + TD DE NG++ N +E I++ F LD ++G ++ + +LDYE+ + ++VAQDGG +L ++A + + + +VND +PE+ +T SI E L ++A V D DS N ++ CS+ PRN+ F+ ++ + L TT+++DRE D I +TV D+ PL+T + I + + DVNDNPP F Q Y + E NN ++ A D D N +VTY + + F+ + + Y I+S G +Y +SFD+E+ V A+D G+P LSS+ ++ + + DQNDN P+ S + E G+L+ ++ A D+DS ++ + + + S+ L + TG++RT R +DR+
Sbjct: 74 LFALNPRSGSLVTAGRIDREELC------AQSPLC--------VVNFNILVENK-MKIYGVEVEIIDINDNFPRFRDEEL-KVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKY-----PELVLEQPLDREKETVHDLLLTALDGGDPVL-SGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNE-EEKISETFQ---LDSNLG----EISTLQSLDYEE-SRFYLMEVVAQDGG--ALVASAKVVVTVQDVNDNAPEVILT----SLTS--SISEDCLPGTVIALFSVHDGDSGENGEIACSI--PRNL------PFKLEKSVDNYYHLLTTRDLDREETS----DYNITLTVM--DHGTP-PLSTESHIPLKVADVNDNPPNFPQASYSTSVTE--NNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPP-LSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDS-GQNAWLSYRLLKASE---PGLFAVGLHTGEVRTARALLDRD 636 HSP 2 Score: 83.1889 bits (204), Expect = 9.913e-15 Identity = 93/354 (26.27%), Postives = 162/354 (45.76%), Query Frame = 3
Query: 1296 LTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDRE---ANEPF-LIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNG-------KIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKS-------QLIISL------ETLQQGQICESIP 2285
L R + ++ R + + SL T IDRE A P +++ I+V + Y E+ I D+NDN P+F ++ EN + A D D+ +N +Y + SSN ++F +D +G ++ Q D EKE+++ ++ A D G P LS ++ I V + D NDNAP F+ S ++ V EN+ +G + + ATD D K + + +++ + + S+ LD G+I T +D E++ V +++ L+ A +V+TV+D+ND+ P L + S +I+L ++ + G+I SIP
Sbjct: 59 LAERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVE----------IIDINDNFPRFRDEELKVKVNENAAAGTRLV--LPFARDADVGVNSLRSYQL-----SSN-LHFSLDVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDP-VLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGK-LTYSFRNE-EEKISETFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDGGA----LVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACSIP 387 HSP 3 Score: 80.1073 bits (196), Expect = 8.272e-14 Identity = 122/486 (25.10%), Postives = 209/486 (43.00%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE-QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFS-LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRA--SKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
+ ++I DINDN P+F + EN +L D D + + S Q N F+LD++ + G+ ++ LD E + H + + A DGG LS T +R+ +L+ ND +P F + ++ +I GT L + +D D IN +L S RN EE + + + T Q++D E + +L++ V Q + L +A + + + DVNDN P+ I E+ V ++H D D NG++ I +N + F+++ Y+ ++ D E+ S Y+ + D G P LS+ S I +++ D NDN P F Q+ ++ V EN G I + A D DS ++ + + + D+ A S ++++ TG + D E+ + +V +S NP L + + V D ND+ P
Sbjct: 119 VEVEIIDINDNFPRFRDEELKVKVNENAAAGTRL-VLPFARDAD----VGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPELVLEQPLDREKETVH--DLLLTALDGGDPVLSGTTHIRVTVLDANDNAP--LFTPSEYSVSVPENIPVGTR----LLMLTATDPDEGINGKLTYSF---RN----EEEKISETFQLDSNLGEISTLQSLDYEESRFYLME----VVAQ-----DGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH--DGDSGENGEIACSIP--RN----LPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPP-LSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDS-GDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPP-----LSSNVSLSLFVLDQNDNTP 560
BLAST of Protocadherin 2 gamma c6 sCP1 vs. UniProt/SwissProt
Match: sp|Q8TAB3|PCD19_HUMAN (Protocadherin-19 OS=Homo sapiens OX=9606 GN=PCDH19 PE=1 SV=3) HSP 1 Score: 197.978 bits (502), Expect = 2.672e-50 Identity = 188/655 (28.70%), Postives = 305/655 (46.56%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELC--PPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELA-KHFKDGVPY--LIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFS-LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIF-IIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDN-----APQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVI 2168
L ++ S L V+KQ IDR+ LC P+ ++ L + S+ C I+V + D NDN P FP Q E P G RIPL A D D+ +F V +Y+L P +L F L K DG + L++ +LDRE S Y+F + A+DG + R G ++IK+ D NDN P F Y ++ EN + P+ ++ +D DE NG++ + + ++F +D V LDYE+ H +E + A+D G NS+ + + + +L+ ND P I + ++ + E ++A V+VSD DS +N ++QC LL N+ FR + Y+ FS + +DRE ++ + + T+Q D +P+ +A F ++I D NDN P F++ Y ++EN N ++ ++ A D DL LNG V+Y I ++ Y I+ +G IY +SF+ E+ + F V+A D G P+ L S++T+ V I D NDN AP ++ N IG+L+ + A D D E ++ R +R +D + G++RT S+ V + + + L A+++I
Sbjct: 71 LVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEIC------------------VIKVEIKDLNDNAPSFPAAQIELEISEAASP-GTRIPLDSAYDPDSGSFGVQTYEL-TPNEL-----FGLEIKTRGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPR-LGTVGLSIKVTDSNDNNPVFSESTYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQID-------PHSGLVTVTGALDYEE-GHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSEL---VEVSESAPPGYVIALVRVSDRDSGLNGRVQCRLLG--NV------PFR--LQEYESFSTILVDGRLDREQHDQYNL------TIQA--RDGGVPMLQSAKSFTVLITDENDNHPHFSKPYYQVIVQEN-NTPGAYL-LSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGLPS-LQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKAEDYD---EGENGRVTYDMTEGDRG--FFEIDQVNGEVRTTRTFGESSKSSYELIVVAHDHGK--TSLSASALVLI 660 HSP 2 Score: 95.9005 bits (237), Expect = 1.302e-18 Identity = 122/489 (24.95%), Postives = 215/489 (43.97%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRT-TQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFTQ-NVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKV--------TYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRF-IVKSDSQNRAS-KLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
I ++I+D+NDNAP F P ++ + P +I + + ++G ++ + + N++F L+I + G A++ +LD E H + F+I A DGG T L I++ + ND +P + T S+ E + N + + SD D N Q+ S N R R I L T T +D E + +D VQ D N IP + ++ ++ D NDNPP +V +E + + ++ A + +D+D LNG+V + +Q++++ S + +D + D E+ Y+ + A D G P L S+ + V I D+NDN P FS+ ++ V EN G + ++A D D L + + + IV S ++ ++++P +G I + E+T F V +K+ L A + + + D+ND+ P
Sbjct: 115 IKVEIKDLNDNAPSF--PAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTY---ELTPNELFGLEIKTRGDGSRFAELVVEKSLDRETQSH-YSFRITALDGGDPPRLGTVGLSIKVTDSNDNNPVF------SESTYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVN------DRTRELFQIDPHSGLVTVTGALDYEEGHVYELD------VQAKDLGPNSIPAHCKVTVSVL--DTNDNPPVINLLSVNSELVEVSESAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTIL---VDGR---------LDREQHDQYNLTIQARDGGVP-MLQSAKSFTVLITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPD-LGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGG--LPSLQSNATVRVIILDVNDNTP 561 HSP 3 Score: 83.9593 bits (206), Expect = 5.691e-15 Identity = 124/490 (25.31%), Postives = 200/490 (40.82%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVI-----VDPIFQIL---VTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQ--------FSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQN-VYYGQIEENI--NNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRI 1841
+ + V D NDNNPVF T ++ EN P + A D D T Y F++ H + +T LD E+ +Y + A D + N ++T+ + D NDN P I + ++ ++ P + I V+D D NGR+ ++ N F L +S + R LD EQ + + I A+DGG L S + + I + ND P F + Q+ + E L V D D +N + P + + PV Y ++LR+ + +A E F + +K D +P L +NA++ +II DVNDN P T + G E I N+ ++ + A D D NG+VTY + + + +F ID NG++ +++F +S Y IVVA D G LS+S+ +++ +
Sbjct: 224 LSIKVTDSNDNNPVFS-ESTYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSG----LVTVTGALDYEEGHVYELDVQAKD-LGPNSIPAHCKVTVSVLDTNDNPPV----INLLSVNSELVEVSESAPPGYVIALVRVSDRDSGLNGRVQCRLLG------NVPFRLQEY-ESFSTILVDGR----LDREQ-HDQYNLTIQARDGGVPMLQSAKSFTVLITDENDNHP--HFSKPYYQVI----VQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDM-------PVFTYVSINPNSGDIYALRSFNHEQTKAFE-FKVLAK----------DGGLPSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKAEDYDEGENGRVTYDMTE----GDRGFFEIDQVNGEVRTTRTFGESSKSSYELIVVAHDHGK-TSLSASALVLIYL 662 HSP 4 Score: 71.633 bits (174), Expect = 4.027e-11 Identity = 65/241 (26.97%), Postives = 111/241 (46.06%), Query Frame = 3
Query: 1494 IFIIINDVNDNPPKFTQNVYYGQIEENIN-NHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRID-SQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
I + I D+NDN P F +I E + + +++A D D G TY + + + R D S+ ++ +S D E +S YSF + A D G P RL + + +++ D NDN P FS+S +A V EN + ++NA+D D + + + +R +L +DP +G + +D E+ V++K+ N + + ++V D ND+PP L
Sbjct: 115 IKVEIKDLNDNAPSFPAAQIELEISEAASPGTRIPLDSAY---DPDSGSFGVQTYELTPNELFGLEIKTRGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPRLGTVG-LSIKVTDSNDNNPVFSESTYAVSVPENSPPNTPVIRLNASDPDE-GTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTVTGALDYEEGHVYELDVQAKDLGP--NSIPAHCKVTVSVLDTNDNPPVINL 348
BLAST of Protocadherin 2 gamma c6 sCP1 vs. TrEMBL
Match: A0A087VWC5 (Uncharacterized protein OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000007700 PE=4 SV=2) HSP 1 Score: 383.645 bits (984), Expect = 4.528e-112 Identity = 263/869 (30.26%), Postives = 430/869 (49.48%), Query Frame = 3
Query: 273 DSNLKVSKQIDREELCPPQMMLQLNKVCGS--------IHTCCHILDFQISCN-NEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELA----------------KHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRN---TGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILD---------------QSIGKV-QAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGG-FSIDEG-TLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEE---------------SRFRHPVNI--------------YKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFM---NAAIHAADKDLHLNGKVTYHIQDF--------------KNSSNAMYFRIDSQNGKIYNSQSFDFEK----ESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLI-----------QEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETL----------QQGQICESIPFXXX-XXXXXXXXXXXXXXRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPN 2525
D + V++ +DRE +C Q L++ I+ CC +L + + Q FIRV V D NDN P FP +++P+ TI E+ P+G RIPLP+A D+D+ F V Y++ + + GN+S F+L + K G PYL + LDRE +Y F L AIDG +G+ TG I I++RD+NDNAP+F+ Y ++EN + + Q V+D D ENGR+ L + + + N +F + + + ++ G A V + LD EQL +F I A D G+ LSS A + + I+NVND +P I F+R G+++T ++ E T+ I+ V V+D+DS + QL CS+ + + + E S FRH + Y+QF+LRT N+DRE ++ VT+ C D D+ PL NAS+ + I+D+ND P+F Y G + EN + V + + D D+ N +T+ +++ +++S+ YFRID ++G+++ + D E+ E Y F VVATD G P R SSS+ + V + D NDN P F + F V+EN +G ++GQ++ D D ++ +RF+++ ++ L+ +D TGQ+ R P+D EK S+I+ V ++N + + + EA ++I+V +LND+ P F L P + +I + E L Q + CE IP+ V D + CC + L + ++G+ L + N++C + P + +S + L A D GNDS+ ++ ++ ++P+
Sbjct: 77 DLRIIVARPLDREAICEKQRAFDLSQYLSGALSGGDCPIYHCCQLLHINVVVSPTSPTQVFFIRVAVQDLNDNPPTFPHLESPFATIPEDLPVGERIPLPEAIDIDSRPFGVMDYRI-VRWIQGNASHFQLNTMTDQEDEEVSRGPAFAYMKTGHPYLSVVHPLDRETEEVYEFVLEAIDGGQGDGESPFTGSVGILIRVRDVNDNAPEFDEKAYSAVVQENTLPRRVLQFKVSDMDTGENGRVFLSIFDPTHK-ANNLFRVSLQNTLPPPEVLNRYPQSRRTPGSFYTASVHLLEYLDAEQLPPRLKFHITATDNGQPPLSSRAEVNVDIINVNDQAPNIVFLREGKRLTSSRLALPEVITVPESIVVEVHVADSDSNLGQLSCSVTSEMDAFRLIEVHPFSNGGDSAATVLSNFRHSIPSSSTFSSSSSFLFPSYRQFTLRTKVNLDRETKAAYM------VTLMCTDNDSAKPLARNASLHVSISDINDETPRFEHTAYQGHVRENQASAPVTHLSPSPTLRVTDADIGRNALITFSLKEAPEKAGKGHLLNTSTRDTSDVGYFRIDPRSGRLWTVTALDAEEDAPGEHKYIFYVVATDDGVPERRSSSALVTVLVDDVNDNPPAFEHYTYNFEVEENAPVGTVVGQVSVRDADLTEANRRVRFLLRGRPEDLF--LVDIDRATGQLSMRRPVDFEKQSSISLTVIAENEAPLATSPVVDSPMSSTAYHTEANVIISVLNLNDNRPEFVLITPHRKHIIFAWEQLPPAGVNQTLRDQRRFCEPIPYRVIDRDCDPTSRVLCCTLELDNTFDGMFGLFGEIPNVLCALKRPPQPQSYKLLLKARDGTGNDSLSSQTQLSVIVKSEPD 935
BLAST of Protocadherin 2 gamma c6 sCP1 vs. TrEMBL
Match: A0A068WEQ7 (Protocadherin 2 gamma c6 sCP1 OS=Echinococcus granulosus OX=6210 GN=EgrG_000854900 PE=4 SV=1) HSP 1 Score: 385.185 bits (988), Expect = 9.895e-111 Identity = 263/862 (30.51%), Postives = 430/862 (49.88%), Query Frame = 3
Query: 273 DSNLKVSKQIDREELCPPQMMLQLNKVCGS--------IHTCCHILDFQISCN-NEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAK---------HFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRN---TGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILD-----QSIGKVQ-----------AQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGG-FSIDEG-TLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEE---------------SRFRHPVNI--------------YKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFM---NAAIHAADKDLHLNGKVTYHIQDF--------------KNSSNAMYFRIDSQNGKIYNSQSFDFEK----ESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLI-----------QEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETL----------QQGQICESIPFXX-XXXXXXXXXXXXXXXRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPN 2525
D + V++ +DRE +C Q L++ I+ CC +L + + Q FIRV V D NDN P FP +++P+ TI E+ P+G RIPLP+A D+D+ F V Y++ + GN+S F+L + K G PYL + LDRE +Y F L AIDG +G+ TG I I++RD+NDNAP+F+ Y ++EN + + Q V D D ENGR+ L + + + N +F + + + +++ + A V + D EQL +F I A D G+ LSS A + + I+NVND +P I F+R G+++T ++ E T+ I+ V V+D+DS + QL CS+ + + + E S FRH + Y+QF+LRT N+DRE ++ VT+ C D D+ PL NAS+ + I+D+ND P+F Y G + EN N V + + D D+ N +T+ +++ +++S+ YFRID ++G+++ + D E+ E Y F VVATD G P R SSS+ + V + D NDN P F + F V+EN +G ++GQ++ D D ++ +RF+++ ++ L+ +D TGQ+ R P+D EK S+I+ V ++N + + + EA ++I+V +LND+ P F L P + +I + E L Q + CE IP+ V + D + CC + L + ++G+ L + N++C + P + +S + L A D GNDS+ ++I ++ ++P+
Sbjct: 77 DLRIIVARPLDREAICEKQRAFDLSQYLSGALNGGDCPIYHCCQLLHINVVVSPTSPTQVFFIRVAVQDLNDNPPTFPHLESPFATIPEDLPVGERIPLPEAIDIDSRPFGVMDYRIARWIQ-GNASHFQLNTMTDQEDEEVNMKTGHPYLSVVHPLDRETEEVYEFVLEAIDGGQGDGESPFTGSVGILIRVRDVNDNAPEFDEKAYSAVVQENTLPRRVLQFKVADMDAGENGRVFLSIFDPTHK-ANNLFRVSLQNTLPPPEALNRYSQSRRTPGSFYTASVHLLEYPDAEQLPPRLKFHITATDNGQPPLSSRAEVNVDIINVNDQAPNIVFLREGKRLTSSRLALPEVITVPESIVVEVHVTDSDSNLGQLSCSVTSEMDAFRLIEVHPFSNGGDSAATVLSNFRHSIPSSSTFSSSSSFLFPSYRQFTLRTKVNLDRETKAAYM------VTLMCTDNDSAKPLTRNASLHVSISDINDETPRFEHTAYQGHVRENQANAPVTHLSPSPTLCVTDADIGRNALITFSLKEAPEKAGKGHPLNASTRDTSDVGYFRIDPRSGRLWTVTALDAEEDAPGEHKYVFYVVATDDGVPERRSSSALVTVLVDDVNDNPPTFEHYTYNFEVEENAPVGTVVGQVSVRDADLTETNRRVRFLLRGRPEDLF--LVDIDRATGQLSMRRPVDFEKQSSISLTVIAENEAPLATSPVVDSPMSSAAYHTEANVIISVLNLNDNRPEFVLITPHRKHIIFAWEQLPPAGVNQTLRDQRRFCEPIPYRVIDRDCDPTSRVLCCTLELDNTFDGMFGLFGEIPNVLCALKRPPQPQSYKLLLKARDGTGNDSLSSQIQLSVIVKSEPD 928
BLAST of Protocadherin 2 gamma c6 sCP1 vs. TrEMBL
Match: A0A158QES7 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS7862 PE=4 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 1.614e-110 Identity = 271/872 (31.08%), Postives = 436/872 (50.00%), Query Frame = 3
Query: 273 DSNLKVSKQIDREELCPPQMMLQLNKVCGS---------IHTCCHILDFQISCN-NEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-----------------AKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRN---TGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQ-SIGKVQAQ---------------VRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSI--DEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILM----------IEESRF-RHPVN--------IYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFM---NAAIHAADKDLHLNGKVTYHIQDF----------KNSSNAMYFRIDSQNGKIYNSQSFDFEKE--------SIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQ-----------EAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETL-----------QQGQICESIPFXXXXXXXXXXXXX-XXXXRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPNVATQSKNQPP 2555
D + V++ +DRE +C Q L LN+ G I+ CC +L + + Q +FIRV V D NDN P+FP +++P+ TI E+ P+G RI LP+A D D+ F V Y++ + + GN+S F+L K G PYL + LDRE +Y F L AIDG + R TG + I+IRD+NDNAP+F+ Y + EN + I Q V+D D ENGR+ L + +S + N +F + + + G++ A+ + + LD EQL +F I A D G+ LSS + I I+NVND +P+I F R G ++ + + T I A V V+DADS +++L C + + + +E S + RH V Y+QF+LRT N+DRE ++ VT+ C D D+ PL NA++ + I+D+ND PKF VY G + EN N V + I AD D N +T+ +++ + +S+ +FRID ++G+++ + D E++ Y F VVATD G P R SSS+ + + + D NDN P F H+ F V+EN +G ++GQ++ D D ++ +RF ++ ++ L+ +D TGQ+ R P+D EK S+I+ V ++N + + + I EA ++I V ++ND+ P F P + +I + E L Q + CE IP++V D D + CC + L++ Y+G+ L ++ N++C + P + +S + L A D +GNDS+ ++I ++ ++P+ ++N PP
Sbjct: 79 DLRIIVARPLDREAICEKQRALALNQHHGGHQMQGGDCPIYHCCKLLHVNVVVSPTSPPQVSFIRVAVQDLNDNPPIFPHIESPFTTIPEDIPVGERIHLPEAFDADSRPFGVVDYRI-MQWMQGNASHFQLNVIADPEEEDEVSGNQGIGFMKVGRPYLNVIHPLDRETEEVYEFILQAIDGGQNERGMPYTGSVAVIIRIRDVNDNAPEFDEKSYSAVVHENTLPQKILQFKVSDRDAGENGRLFLNIIDSPHKASN-LFRISLQNSLPPGEMVAKYTNSRPTPGSFYTVSLHLLEYLDAEQLPPRIKFYISATDNGQPPLSSRVEVNIDIVNVNDQAPKIEFYREGTRLAPNRLVLPEVITAPESIAAEVHVTDADSSLSELSCRITSEEDTFRLTEVNPFTGNVENSNYGRHLVASSSGFLFPAYRQFTLRTKVNLDRETKALYM------VTIMCTDNDSSKPLTRNATLHVSISDINDETPKFEHPVYQGHVRENEPNAPVIHLTPSPTIRVADADAGRNALITFSLKEASAVEGSSNSTRRTSDVGHFRIDPRSGRLWTVPALDAEEQVDDASGEGRKYVFYVVATDDGVPERRSSSALMNIFVDDINDNPPAFEHYHYNFEVEENAPVGTVVGQVSVRDADRTEANRKVRFSLRGRPEDLF--LVDIDRTTGQMNMRRPVDYEKQSSISLTVVAENDAPLASPSISGRPPSSSAYQTEASVIINVLNVNDNRPEFIPIAPHRKHIIFAWEQLPVAGSNQTSGKNQRRFCEPIPYKVIDKDCDPASREFCCTLELENTYDGMFGLLEEIPNVLCALKRPSQPQSYKLMLKARDGNGNDSLSSQIQLSVIIKSEPDYTKFTQNGPP 940
BLAST of Protocadherin 2 gamma c6 sCP1 vs. TrEMBL
Match: G4VRE5 (Putative cadherin OS=Schistosoma mansoni OX=6183 GN=Smp_145210 PE=4 SV=1) HSP 1 Score: 378.252 bits (970), Expect = 6.601e-109 Identity = 290/896 (32.37%), Postives = 437/896 (48.77%), Query Frame = 3
Query: 258 FILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIH-------------------TCCHILDFQISCNNEEMQSNF-IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKL-------ELPFKLGNSSDFELAKHFKD---------------GVPYLIITSTLDREKTSMYTFTLIAIDGVEGN-----------RNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRA--------INNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGG-FSIDE-GTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESR----------------FRHPVNI---YKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN-------PSR-------IFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETL------QQGQ------------------------------------ICESIPFXXXXXXXXXXXXXX-XXXRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPNV 2528
FILD D +K++K +DRE +C +LQ + S++ CC +L I + E+ + F I+V V D NDN P FP + TPY I E+ L +I LP+A D D+ F+V+ Y+ + F+LG S +L F G PYL IT LDRE +Y+FTLIAIDG GN TG I IKI D+NDN P FE+ Y + EN + PI + ++ D D +NGR+ + ++D G+ Q R I+ LD E+ + F +VA D G+ LSS ++I+I+NVND P+I F+ NG++++ G S+ E T I+A V V+D DS I Q++C L+ ++ EE+ F + I YKQ+ +RT + DRE + VTV+C D + + L+ NAS+ I I D+N++ P FT++++ GQ+ EN + EV M IHA D D+ +N +TY N + +FRID GK++ QS D E S Y +V+A D G P LSSS+ I++ ++D NDN P+F +H+ F V EN G IG + A D+D ++ +R+ ++ + N KLIT+D +G +RTR PIDRE S+I+ VE++N PS I N + EA +VIT+ +LND+ P F L +P +S + + E L +Q Q +CE +P V D D ++ C++ L NYNGL +L +++C P ++ +TLIA D NDS+ +++ F ++ +DPN+
Sbjct: 34 FILD-DFLIKLAKPLDREMIC----LLQTESLRHSVNRNDPSIASYSDTSQVCLPGACCKLLHVNIITSPTELPTPFYIQVAVQDINDNPPRFPPLHTPYIVIREDIKLDEKIWLPQASDADSDQFNVAEYRAINWIHGNQSHFRLGVSDSNDLNNDFIGDVHEIPSSINLNSHLGKPYLTITEGLDRELIDLYSFTLIAIDG-GGNIPVSNTPDMNKALTGSVSIIIKISDVNDNHPTFEQNAYRAEVAENSVNSPIIEFVLIDRDIGDNGRVTI-----------------VIDDPTGQAQHLFRTYYKGSLQIISPLDAERHLNLLRFHLVANDHGQPILSSRCEIQIRIINVNDNPPKIVFLNNGKRLSDGRISLPEVETPQRAIVALVHVTDDDSPIEQIRCHLIKEDDMFSFEETGSTNFLTHQQTQQSYNLFNEAIGIHSTYKQYVIRTRKIPDREEKHFY------TVTVECIDDEGQYALSRNASLHITITDINEHKPIFTKSIFTGQVIENQLHAEVHMLTPIHATDLDVGVNALITY---SLVNPYDTAFFRIDPITGKLWTIQSLDCENRSEYHLVVIARDSGSPVPLSSSANIVITVEDTNDNVPEFLNTHYLFEVAENAPGGTEIGVVEAIDKDVTIINQRVRYNLRGN--NEDLKLITIDRNSGTLRTRRPIDRESRSSISLIVEAENEVPIHRSPSARNDNFNTIMNHIGTEASVVITILNLNDNRPEFMLIEPHRSHVTFTWEQLNPLIIPKQNQLNATTVHLKSDNQFGKKEKPIKEENQELSSLENANPVCEPLPHRVIDRDMESDSMLDCCILELLDNYNGLFALIPQAPSVLCAMYRPPSPQTYKLTLIAKDGLTNDSLSSQVHFTVIIRSDPNL 895
BLAST of Protocadherin 2 gamma c6 sCP1 vs. TrEMBL
Match: A0A5K3F6N9 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 2.266e-103 Identity = 264/864 (30.56%), Postives = 440/864 (50.93%), Query Frame = 3
Query: 273 DSNLKVSKQIDREELCPPQMML--QLNKVCGS--IHTCCHILDFQISCNNEEM-QSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-----------------AKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRN---TGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLD----ILDQSIGKVQAQVRA------------INNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSI--DEGTLSNKILAYVQVSDADSMINQLQCSL--------LTPRN------------ILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFM---NAAIHAADKDLHLNGKVTYHIQDF----KNS--------SNAMYFRIDSQNGKIYNSQSFDFE---KESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLI----------QEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLE---------TLQQGQICESIPFXX-XXXXXXXXXXXXXXXRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPNVATQSKNQPPSS 2561
D + V++ +DRE +C Q L +L+ G + CC +L + + + Q FIRV V D NDN P FP V++P+ TI E+ P+G +I LPKA D+D+ F V+ Y++ + GN+S F+L +++ + PYL I +LDRE +Y F L AIDG +G+ TG I I++RD+NDNAP+F++ +Y ++EN + + + ++D D ENGRI + + + + N +F + I I A R+ + LD EQL F ++A D G+ +L+S A + I I+NVND +P I F+R G+++T + + T I+A V V+D+DS + L C + LT N +L ++S + Y+QF+LRT N+DRE+ + +VT+ C D ++ P + N+S+ I I+D+ND PKF +VY G ++EN N V + IH D D+ N +T+ +++ KN S+A FRID ++G+++ + D + + Y F VVATD G P R SSS+ + + + D NDN P F H+ F V EN G IG+++ +D D ++ +RF ++ ++ L+ ++ +G++ TR PID EK S+I+ V ++N + D + EA +VI+V ++ND+ P F P + ++ E TL + + CESIP++V + D + CC + L+ ++G+ L ++ N++C+ + P +S V L A D G+DS+ +++ ++ N+ ++ S P S
Sbjct: 79 DLRIVVARPLDREAICEKQKTLGYRLSGPFGGCLVFHCCQLLHVNVVMSPTSLTQVFFIRVAVQDVNDNAPTFPHVESPFITISEDMPVGEKILLPKAVDIDSQPFGVADYRIAR-WVQGNASHFQLNMLTDKEDDEDGNLNPVSEYAQTRRPYLDIVHSLDRETDEVYEFVLEAIDGGQGDGGAPFTGTVNILIRVRDVNDNAPEFDKLVYDAVVQENTLPQKVIRFKISDFDAGENGRIFINIVDPTHK-ANNLFRVSLQNTIPPPEIMNKYASSRSPPGSHYIGSLHLLEYLDAEQLPPRLRFHLIASDNGQPALTSRAEVNIDIINVNDQAPNIVFLREGKRLTTSRLVLPEVITAPESIVAEVHVTDSDSNLGHLTCRITSGGDAFRLTEVNPFAGSNSGTVTALLNFDQSTSPFVFSSYRQFTLRTKVNLDRESKAVY------VVTIMCTDNESVNPFSRNSSLHISISDINDQTPKFEYSVYTGHVKENEANAPVTHLSPSPTIHVTDNDVGRNALITFSLKEAPVEGKNDPNKSSIGVSDASRFRIDPRSGRLWTVPALDADDISESHKYVFYVVATDDGVPERRSSSALVHIIVDDCNDNPPAFEHYHYNFEVKENAPAGTSIGRVSVSDADKTEANRKVRFSLRGRLEDLF--LVDINRASGELTTRRPIDYEKQSSISLTVVAENEVPLVADAVGRPSRADISQAEASVVISVINVNDNRPEFVPVSPHRKHIVFVWEQLPVVGVNQTLDRRKFCESIPYKVIDKDCDPASQELCCTLELEDTFDGMFGLLEEIPNVVCVLKRPTHPQSYKVMLKARDGKGDDSLSSQMQLSVIIKNERDLDMYSLKGSPDS 932
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Cavefish
Match: pcdh17 (protocadherin 17 [Source:NCBI gene;Acc:103025306]) HSP 1 Score: 215.312 bits (547), Expect = 9.241e-57 Identity = 198/637 (31.08%), Postives = 305/637 (47.88%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILV----TDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRF--VRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP----QFSQSHFA-FFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE 2111
L +D +S L +KQ IDRE LC + N C L ++ N++E+ I+V + D NDN P FP Q I EN G R PL A D D + +Y++ + S F L K DG P L++ +LDRE+ S +T + A DG E + +G +I +K+ D NDN+P FE+P Y+ I EN P +L+ TD DE NG++ + I ++FT+D I K+Q ++ DYE+ E + A+D G N + + +++L+ ND P I F VR G ++ E ++A V+V+D DS N QLQC +L N+ FR N +++ T + +DRE + + I T+ D N PLN+ S + I D NDN P+FT+ VY Q+ EN E ++ A D DL NG V+Y + + S Y I +G IY +SF++E+ + F V A D G+P+ L S++T+ V + D NDN P Q+ A V NV +GH+I + A D D E + + + +++ L +D +TG++RT P+ E + + ++
Sbjct: 77 LIDVDPESGLLYTKQRIDREALC------KRNPRCQ--------LSMEVFANDKEI--CMIKVEIQDINDNPPSFPSEQIDI-DISENAAPGTRFPLAAAYDPDTRENGLKTYQI----TRDDYSIFSLDVKSRGDGTKFPELVVQRSLDREERSHHTLIITATDGGEYPK-SGTMQINVKVTDSNDNSPVFEQPSYVVEIPEN---SPPGTVLIDLNATDPDEGSNGQVTYAFSCYVPDRIKELFTIDPRTGVI-KIQGKI------DYEE-NPIIEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPSIGFVAVRQG-------AVSEAAAPGTVIALVRVTDKDSGRNGQLQCRILG--NV------PFRLEENSDNFYTVVTDRPLDREVKDEYNI------TIVAKDNGNP-PLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYL--GSVLAHDPDLGQNGTVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPH-LESNTTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDND-FGESGRLTYEISDGNEDH---LFEIDAVTGEVRTAQPLWEEVSPVVELIIK 651 HSP 2 Score: 92.0485 bits (227), Expect = 2.568e-18 Identity = 127/490 (25.92%), Postives = 205/490 (41.84%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVT-DEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN---QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFT-QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRF--IVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
I ++I+DINDN P F I EN F + D D ENG LK + ++ + IF+LD+ + G ++ +LD E+ H I A DGG S T + +++ + ND SP +Q + I E + +L + +D D N S P I + R V ++ ID E N ID VQ D N IP + ++ ++ D NDN P V G + E V A + DKD NG++ I + FR++ + Y + D E + Y+ +VA D G+P L+S+ + V+I D+NDNAP+F++ + V EN G +G + A D D L ++ + + + + S+ + + + P G I + E+T F V++K+ L + ++V D+ND+ P L
Sbjct: 121 IKVEIQDINDNPPSFPSEQIDIDISENAAPGTRFPLAAAYDPDTRENG---LKTYQITRDDYS-IFSLDVKSRGDGTKFPELVVQRSLDREERSH-HTLIITATDGGEYPKSGTMQINVKVTDSNDNSPVF------EQPSYVVEIPENSPPGTVLIDLNATDPDEGSNGQVTYAFSCYVPDRIKELFTIDPRTGV-------IKIQGKIDYEENPIIEID------VQAKDQGPNPIPGHCKVTVKVL--DRNDNWPSIGFVAVRQGAVSEAAAPGTVI--ALVRVTDKDSGRNGQLQCRIL------GNVPFRLEENSDNFYTVVTDRPLDREVKDEYNITIVAKDNGNP-PLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPD-LGQNGTVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPH--LESNTTVRVSVLDVNDNIPVIVL 572 HSP 3 Score: 87.8113 bits (216), Expect = 4.432e-17 Identity = 88/312 (28.21%), Postives = 137/312 (43.91%), Query Frame = 3
Query: 1371 LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQ---------DFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICES 2279
L T Q IDREA + + ++++ D EI + I + I D+NDNPP F I EN F AA A D D NG TY I D K+ + F ++ +S D E+ S ++ I+ ATD G + S + I V++ D NDN+P F Q + + EN G ++ +NATD D + + + +R +L T+DP TG I+ + ID E+ I V++K+ N + + + V D ND+ P+ I ++QG + E+
Sbjct: 87 LYTKQRIDREAL--CKRNPRCQLSMEVFANDKEICM-----IKVEIQDINDNPPSFPSEQIDIDISENAAPGTRFPLAA--AYDPDTRENGLKTYQITRDDYSIFSLDVKSRGDGTKFP------ELVVQRSLDREERSHHTLIITATDGGEYPK-SGTMQINVKVTDSNDNSPVFEQPSYVVEIPENSPPGTVLIDLNATDPDEG-SNGQVTYAFSCYVPDRIKELFTIDPRTGVIKIQGKIDYEENPIIEIDVQAKDQGP--NPIPGHCKVTVKVLDRNDNWPS------------IGFVAVRQGAVSEA 367
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Cavefish
Match: ENSAMXT00000016369.2 (pep primary_assembly:Astyanax_mexicanus-2.0:8:8904389:8910149:1 gene:ENSAMXG00000015901.2 transcript:ENSAMXT00000016369.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 211.075 bits (536), Expect = 2.428e-56 Identity = 194/614 (31.60%), Postives = 307/614 (50.00%), Query Frame = 3
Query: 273 DSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLEL--PFKLGNSSDFELAKHFKDG-VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNI---LMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQI-EENINNHEVFMNAAIHAADKDLHLNGKVTYHI-QDFKNSSNAMYF-RIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP----QFSQSHFAFFVDE---NVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRT 2060
D L V+ +IDREE+C + + C +++ +I+ N ++ ++I V + D ND+ P+FP + I EN G R L A+D D+ SV YKL F++ ++ +DG +P+LI+ LDRE +S + L A+DG + +G EI + + D+NDN P F + Y + EN I + Q+ TD DE NG + + + ++F LD V ++ +D+EQ Y +E I A D L++ ++ IQI++VND +PEI + +I E + +A + VSD DS +N ++ CS+ P +I LM + NIY SL TT ++DRE S+ +T+ D + PL++ +I + ++DVNDN P+F+ N Y + E N+ +F ++ A D DL NG ++YHI +D + + F I+ + G+IY + FDFE Y F +VA+D G P+ +SS+ T+ V I DQNDN P S + A V+E NV GHL+ ++ A D D + + + F ++ S + L LD TGQIRT
Sbjct: 75 DGVLHVNGKIDREEVC------ERSSSC--------LINLKIALENP-LEIHYITVEIVDINDHAPIFP-EKEKRLEISENAVAGARFQLQAARDADSGVNSVQLYKLSQNEHFRI------DIKDRGEDGKIPFLILQKPLDRETSSKHKIHLTALDGGRPQK-SGTMEIIVDVIDVNDNVPVFTKDAYSVKLSENAPIGTAVIQVNATDADEGTNGEVFFSFGHDVDSNLLRLFDLD-------PVTGEIVVKGPIDFEQKYQ-YEIDIQASDKASAPLTTEKSIFIQIVDVNDNAPEIEVT------SLSVAIAENSKPGTTVALISVSDLDSGMNGKVSCSV--PEDIPFSLMQSSQK-----NIY---SLTTTSSLDREKT------SQYDITLTAKDAGHP-PLSSIKTITVFVSDVNDNSPEFSLNPYTFYVPENNVPGMSMF---SVSAHDLDLDENGVISYHIVRDTAEENKHLSFLNINPETGEIYALKRFDFENIKSYQFNIVASDSGTPS-MSSNVTVNVFILDQNDNVPVILYPVSSNGSAEGVEEISRNVNAGHLVTKVRAYDAD-IGYNGWLLFSLQEVSDH---SLFGLDRYTGQIRT 626 HSP 2 Score: 103.99 bits (258), Expect = 3.319e-22 Identity = 141/493 (28.60%), Postives = 212/493 (43.00%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSI-GKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPV--NIYKQFSLRTTQN-------IDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDS--QNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
IT++I DIND+AP F I EN + FQ L D D +G ++++ Q N+ F +DI D+ GK+ + LD E + + A DGGR S T + + +++VND P F ++ + + E + V +DAD N + F H V N+ + F L ID E + ID +Q D + PL T SIFI I DVNDN P+ I EN A I +D D +NGKV+ + + + + + S IY+ + S D EK S Y + A D GHP LSS TI V + D NDN+P+FS + + F+V EN G + ++A D D L E+ I + + D+ +N+ + ++P TG+I D E + F + +S PS N + + + D ND+ P
Sbjct: 113 ITVEIVDINDHAPIFPEKEKRLEISENAVAGARFQ-LQAARDAD-SGVNSVQLYKLSQ---NEHFRIDIKDRGEDGKIPFLILQ-KPLDRET-SSKHKIHLTALDGGRPQKSGTMEIIVDVIDVNDNVP--VFTKDAYSV----KLSENAPIGTAVIQVNATDADEGTNG---------EVFF----SFGHDVDSNLLRLFDLDPVTGEIVVKGPIDFEQKYQYEID------IQASDKASA-PLTTEKSIFIQIVDVNDNAPEIEVTSLSVAIAENSKPGTTV--ALISVSDLDSGMNGKVSCSVPE-----DIPFSLMQSSQKNIYSLTTTSSLDREKTSQYDITLTAKDAGHP-PLSSIKTITVFVSDVNDNSPEFSLNPYTFYVPENNVPGMSMFSVSAHDLD-LDENGVISYHIVRDTAEENKHLSFLNINPETGEIYALKRFDFENIKSYQFNIVASDSGTPSMSSN-----VTVNVFILDQNDNVP 558 HSP 3 Score: 86.2705 bits (212), Expect = 1.157e-16 Identity = 82/289 (28.37%), Postives = 129/289 (44.64%), Query Frame = 3
Query: 1494 IFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRID----SQNGKI---YNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL----------KDPSKSQLIISLETLQQG-------QICESIPF 2288
I + I D+ND+ P F + +I EN F A AD ++ +Q +K S N +FRID ++GKI + D E S + + A D G P + S + IIV + D NDN P F++ ++ + EN IG + Q+NATD D + ++ F D + +L LDP+TG+I + PID E+ +++ + + L E I I + D+ND+ P + P + +IS+ L G + E IPF
Sbjct: 113 ITVEIVDINDHAPIFPEKEKRLEISENAVAGARFQLQAARDADSGVN-------SVQLYKLSQNE-HFRIDIKDRGEDGKIPFLILQKPLDRETSSKHKIHLTALDGGRPQK-SGTMEIIVDVIDVNDNVPVFTKDAYSVKLSENAPIGTAVIQVNATDADE-GTNGEVFFSFGHDVDSNLLRLFDLDPVTGEIVVKGPIDFEQKYQYEIDIQASDKASA--PLTTEKSIFIQIVDVNDNAPEIEVTSLSVAIAENSKPGTTVALISVSDLDSGMNGKVSCSVPEDIPF 389 HSP 4 Score: 77.411 bits (189), Expect = 5.482e-14 Identity = 71/248 (28.63%), Postives = 112/248 (45.16%), Query Frame = 3
Query: 1494 IFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS---------LPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
I + + DVNDN P FT++ Y ++ EN + ++A D D NG+V + +S+ F +D G+I DFE++ Y + A+D+ L++ +I ++I D NDNAP+ + + + EN + G + I+ +D DS +PE DI F + SQ L T L DREKTS + +K+ L I + V D+ND+ P F L
Sbjct: 222 IIVDVIDVNDNVPVFTKDAYSVKLSENAPIGTAVIQ--VNATDADEGTNGEVFFSFGHDVDSNLLRLFDLDPVTGEIVVKGPIDFEQKYQYEIDIQASDKASA-PLTTEKSIFIQIVDVNDNAPEIEVTSLSVAIAENSKPGTTVALISVSDLDSGMNGKVSCSVPE--DIPFSLMQSSQKNIYSLTTTSSL----------DREKTSQYDITLTAKDAGH--PPLSSIKTITVFVSDVNDNSPEFSL 452
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Cavefish
Match: pcdh1gc5 (protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]) HSP 1 Score: 209.92 bits (533), Expect = 7.419e-56 Identity = 195/626 (31.15%), Postives = 300/626 (47.92%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSD-FELAKHFKDG---VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEEN-INNHEVFMNAAIHAADKDLHLNGKVTYHIQDFK--NSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF--------SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE 2111
L V+ +IDRE LC G C L I E +Q + + + + D NDN P F ++ I E+ LG R P+ A+D D+ S+ SY L NS++ F L DG VP LI+ LDREK ++ L A+DG + R +G T + I + D NDN P FE IY +++E+ I + I TD DE NG I +++ K+F ++ ++ I LD+E + +S+ F I AQD G L +++ I++++ ND PEI + E ++A + V D DS N + SL P+ +S F + +SL T ++DRE N + I+ I+ T PL T +I + I DVNDN P F+Q Y I+EN + +F +I A D D++ N +TY + D K + + YF I+S+NG IY+ SFD+EK + IV A D G P+ LSS++T+ V I DQNDNAP S SH + + + GHL+ ++ A D DS H +I ++ + L +++ TG++RT+ + ++ S+ +E
Sbjct: 83 LIVNGRIDRETLC------------GQAVNCLVPLQIIIE---EPLQLHRVEIEIQDINDNAPNFHTKES-VLKIAESAALGSRFPIESAEDPDSGKNSLKSYSL-------NSNEHFRLNVKALDGGRKVPELILDKPLDREKQLIHKLILTALDGGDPVR-SGSTLLKIVVEDNNDNEPHFELQIYKASVQESAGIGSNVVTIKATDMDEGINGEIQYYFAAHTPDYVRKVF-------NVNPDSGEITVIGKLDHEGI-NSYTFDICAQDKGYPKLEGHSSVHIRVIDENDNPPEIILTSLPNPVP------ENATVGTVVALINVMDLDSGENG-KVSLKIPKGFPFKLKSSFEN------HYSLITDSSLDRELNSEYNIE--IVATDSGSP-----PLKTVKTINVTILDVNDNAPAFSQTSYNVYIKENNVAGSSLF---SITALDSDVNNNAILTYSVVDSKVNDIPASSYFYINSENGTIYSMSSFDYEKVKRLTLIVQAKDHGSPS-LSSNATLHVFILDQNDNAPSVIYPSAVMGSVSHQR--MPRSAKPGHLVTKVTAVDADS--GHN--AWISYRLAEATDASLFSVNLHTGEVRTKRSLSEQEDSSQRLLIE 646
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Cavefish
Match: ENSAMXT00000035285.1 (pep primary_assembly:Astyanax_mexicanus-2.0:8:8923404:8955697:1 gene:ENSAMXG00000041384.1 transcript:ENSAMXT00000035285.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 205.682 bits (522), Expect = 2.518e-54 Identity = 191/614 (31.11%), Postives = 303/614 (49.35%), Query Frame = 3
Query: 273 DSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLEL--PFKLGNSSDFELAKHFKDG-VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQI-EENINNHEVFMNAAIHAADKDLHLNGKVTYHI-----QDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP----QFSQSHFAFFVDE---NVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRT 2060
D L V+ +IDREE+C + + C +++ +I+ N ++ +++ V + D ND+ P+F + I EN G R L A+D D+ SV YKL F++ E+ +DG +P+LI+ +LDRE + + L A+DG + +G EI + + DINDNAP F + Y + EN I + Q+ TD D NG + + ++F LD V ++ +D+EQ Y +E I A D L++ + IQI++VND +PEI + ++ E + S +A + VSD DS +N ++ CS+ +++ S+ NIY SL T ++DRE S+ +T D + PL++ ++ + ++DVNDN P+F+ N Y + E N+ +F ++ A D DL N ++YHI Q+ K+SS + I+ + G IY +SFDFE Y F +VA+D G P+ LSS+ T+ V I DQNDN P S + A V+E NV GHL+ ++ A D D + + + F ++ S + L LD TGQIRT
Sbjct: 80 DGVLHVNGKIDREEVC------ERSSSC--------LINLKIALENP-LEIHYVTVEIVDINDHPPIFS-EKEKRLEISENAIAGVRFQLQGARDADSGVNSVQMYKLSQNEHFRI------EVRDRGEDGKMPFLILQKSLDRETCARHKLLLTALDGGRPQK-SGTMEIIVDVIDINDNAPVFTKDTYSAKLSENAPIGTKVIQVNATDLDNGPNGEVFYIFGQDVNRNLRRVFDLD-------PVTGEIVVKGPIDFEQKYQ-YEIDIQASDKALAPLTTDKIILIQIVDVNDNAPEIEVT------SLSIAVPENSHSGTTVALISVSDVDSGMNGKVSCSVPEDIPFSLLQSSQ----ENIY---SLVTKSSLDREKT------SQYDITFIAKDAGHP-PLSSIKTLTVFVSDVNDNSPEFSLNPYTFYVPENNVPGMSMF---SVSAHDLDLDENAIISYHIWRDPAQENKHSS---FLNINPETGAIYALKSFDFESTKSYQFYIVASDSGTPS-LSSNVTVNVFILDQNDNVPVILYPVSSNGSAEGVEEIPRNVNAGHLVTKVRAYDAD-IGYNGWLLFSLQEVSDH---SLFGLDRYTGQIRT 631 HSP 2 Score: 100.523 bits (249), Expect = 4.986e-21 Identity = 133/489 (27.20%), Postives = 210/489 (42.94%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANE-----PFLIDSKIIVTVQCDDYDNEI-PLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSD--SQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
+T++I DIND+ P F I EN I FQ L D D +G ++M+ Q N+ F +++ D+ + +LD E + + A DGGR S T + + ++++ND +P F ++ T + E + V +D D+ N + I F VN +LR ++D E P + K + D + PL T+ I I I DVNDN P+ + EN +H A I +D D +NGKV+ + + + + + S IY+ S D EK S Y +A D GHP LSS T+ V + D NDN+P+FS + + F+V EN G + ++A D D L E+ I + + D +N+ S + ++P TG I D E T + F++ +S PS L + + + D ND+ P
Sbjct: 118 VTVEIVDINDHPPIFSEKEKRLEISENAIAGVRFQ-LQGARDAD-SGVNSVQMYKLSQ---NEHFRIEVRDRGEDGKMPFLILQKSLDRETCAR-HKLLLTALDGGRPQKSGTMEIIVDVIDINDNAPV--FTKD----TYSAKLSENAPIGTKVIQVNATDLDNGPNG---------EVFYI----FGQDVN----RNLRRVFDLDPVTGEIVVKGPIDFEQKYQYEIDIQASDKALAPLTTDKIILIQIVDVNDNAPEIEVTSLSIAVPEN--SHSGTTVALISVSDVDSGMNGKVSCSVPE-----DIPFSLLQSSQENIYSLVTKSSLDREKTSQYDITFIAKDAGHP-PLSSIKTLTVFVSDVNDNSPEFSLNPYTFYVPENNVPGMSMFSVSAHDLD-LDENAIISYHIWRDPAQENKHSSFLNINPETGAIYALKSFDFESTKSYQFYIVASDSGTPS-----LSSNVTVNVFILDQNDNVP 563
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Cavefish
Match: pcdh1g22 (protocadherin 1 gamma 22 [Source:ZFIN;Acc:ZDB-GENE-030131-2695]) HSP 1 Score: 202.986 bits (515), Expect = 1.474e-53 Identity = 182/621 (29.31%), Postives = 295/621 (47.50%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKEN-VIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFK--NSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP------QFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE 2111
L V+++IDRE LC L+ C +L + N ++ + + + + D NDN P F Q E P G + L A D D + S+ SY L ++ F L +DG+ P L++ LDREK +++ L A+DG R +G EITI + D NDNAP+FE+ Y T+ EN +I + I ++ D DE NG ++ + I +F ++ IG LDYEQ + +F ++A+D G + +++I+I +VND PEI + E +L+N ++A + DADS N N+ + S FR ++ ++L T +DRE + I I + P +T + +I++DVNDNPP F+QN Y +EN + + ++ A D DL N K++Y + D K + + Y I+S+NG IY+ SFD+EK ++ V A D G P+ LSS++T+ V I DQNDNAP SH + + GHL+ ++ A D DS + +I ++ + L +++ TG++RT+ + + S+ ++
Sbjct: 73 LVVNEKIDREFLC------GLSSPC--------LLPLEAVIENP-LRLHRVEIEIQDINDNIPSFSSSQRILNIPESINP-GAKFLLDSADDPDVGSNSLQSYSLN------KNTFFILNVKTQDGIKIPELVLNKPLDREKQAIHNLILTAVDGGNPVR-SGSCEITIVVLDNNDNAPQFEKSFYEATVGENELIGNEIVRVSAVDLDEGPNGEVEYFFAEKTTDAIKAVFAINSKTGVIG-------LKGPLDYEQA-NLHKFDVLAKDKGNPQMEGHCSVKIKINDVNDNDPEIVITSLSSPVP------ENSLNNTVVALISTKDADSGDNG-------KVNLTLASRSPFRLSPSVLNHYTLVTNAPLDREKYPVYEIKLNAIDS-------GSPPRSTQKIVTLIVSDVNDNPPVFSQNSYTVYTKENSFHGSIL--CSVSANDPDLDKNAKISYSVLDSKIQDVFVSSYIYINSENGSIYSMHSFDYEKMKVFKIQVQAKDHGSPS-LSSNATVHVFILDQNDNAPYVIYPSAVMGSHQR--MPRTAKPGHLVTKVTAVDADS----GNNGWISYRLAEATDASLFSVNLHTGEVRTKRSLSEQDDSSQRLLIQ 633 HSP 2 Score: 82.4185 bits (202), Expect = 1.697e-15 Identity = 67/237 (28.27%), Postives = 118/237 (49.79%), Query Frame = 3
Query: 1500 IIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNG----KIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
I I D+NDN P F+ + I E+IN F+ + A D D+ N +Y + N + + +Q+G ++ ++ D EK++I++ I+ A D G+P R S S I + + D NDNAPQF +S + V EN IG+ I +++A D D P + ++ + + + + ++ TG I + P+D E+ + F V +K+ + + I + D+ND+ P
Sbjct: 110 IEIQDINDNIPSFSSSQRILNIPESINPGAKFLLDS--ADDPDVGSNSLQSYSL----NKNTFFILNVKTQDGIKIPELVLNKPLDREKQAIHNLILTAVDGGNPVR-SGSCEITIVVLDNNDNAPQFEKSFYEATVGENELIGNEIVRVSAVDLDEGP-NGEVEYFFAEKTTDAIKAVFAINSKTGVIGLKGPLDYEQANLHKFDVLAKDKGN--PQMEGHCSVKIKINDVNDNDP 336 HSP 3 Score: 81.2629 bits (199), Expect = 4.233e-15 Identity = 69/242 (28.51%), Postives = 118/242 (48.76%), Query Frame = 3
Query: 1494 IFIIINDVNDNPPKFTQNVYYGQIEEN--INNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITF---FVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
I I++ D NDN P+F ++ Y + EN I N V + A D D NG+V Y + + F I+S+ G I D+E+ +++ F V+A D+G+P ++ ++ ++I D NDN P+ + + V EN ++ I+ D DS ++ + + S S R S + L+ T + T P+DREK ++S +P R + ++ + V D+ND+PP F
Sbjct: 216 ITIVVLDNNDNAPQFEKSFYEATVGENELIGNEIV----RVSAVDLDEGPNGEVEYFFAEKTTDAIKAVFAINSKTGVIGLKGPLDYEQANLHKFDVLAKDKGNP-QMEGHCSVKIKINDVNDNDPEIVITSLSSPVPENSLNNTVVALISTKDADS-GDNGKVNLTLASRSPFRLSPSV-LNHYT--LVTNAPLDREKYPVYEIKLNAIDSGSPPRS-----TQKIVTLIVSDVNDNPPVF 443
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 186.422 bits (472), Expect = 1.492e-48 Identity = 189/665 (28.42%), Postives = 304/665 (45.71%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNF----IRVFVDDENDNNPVF--PIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELA-KHFKDG--VPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDI--LDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEEN--INNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRF-IVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKS 2228
+++DRE LC Q CH+ D Q+ + F +R+ V+D NDN P F P++ ++ EN P G R P+ A D D+ V Y+L LP S FEL+ +G VPYL++ +LDRE+ +Y L A+DG ++G + I + D NDN+P F++ I EN V + Q+ +D D N + ++ S + + LDQ+ G V +N L + + I+A D G + +TAT+ + + +VND SP I + G I E + N +A + VSD D N + C + P ++ + +P Q+ L T + +D E + +V ++ D L+ S+ I + D NDN P FT+ Y + EN I H + + A D+D+ N ++ Y F F +D + G I ++ D EK++ YSF ++A DQG P L ++T+IV + D NDN P+FS + F F+V+ENV +G + D D E+ +R I+ +D++ +L ++DP +G IR+ DRE+ V++ + +VI V D+ND+ P L PS +
Sbjct: 96 FAAGRKMDREALCGGQ----------DPGDECHV-DVQVGVLPVQPGPFFKLIEVRINVEDINDNAPAFAAPVLT---VSVPENAPAGKRFPIQPANDPDSEANGVRRYEL-LPSDPATVSAFELSVTETANGEKVPYLVVRKSLDREERQLYEMNLRAVDG-GSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLV-----TVNGLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNGVIYISEASHVNLPVALITVSDPDIGANGAVTCYIYNPEVPFQLK--KLTYP----NQYLLETRETLDYETKNEY------VVQIKAADA-GATSLSRTMSVTIKLLDSNDNAPVFTEPTYKVSVPENNVIGKHLI----TVSATDRDMDKNAEMVY----FLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIP-VLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDE-GENGRVRLSILGTDNR----QLFSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEPVRS--STVKVVIHVMDINDNSPIV-LMPPSNT 709 HSP 2 Score: 116.701 bits (291), Expect = 9.515e-27 Identity = 166/629 (26.39%), Postives = 257/629 (40.86%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELP-------------FKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAID-GVEGNRNTGKTEI----------TIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDRE--ANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF----SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRF-IVKSDSQNRASKLITLDPLTGQIRTRYPI 2072
L V K +DREE +M L+ H+ +L R+ V D NDN+PVF + I EN P+G + A D D + + Y+L F+L +S + + L+RE++ +Y ++A D G E T + TI+IRDI AP IYI + P+ I V+D D NG + ++N + K T Q + LDYE + + +I A D G SLS T ++ I++L+ ND +P + T S+ E + K L V +D D N L P M + + T+ +DRE AN F I +K D IP L NA++ + + DVNDN P+F+ + + EN+ H + AD D NG+V I + N F ID ++G I ++ FD E+ Y V ATD G P R SS+ +++ + D NDN+P S + + F V + G ++ +++A D D+ + ++R+ IV + N L +DP+ G I P+
Sbjct: 219 LVVRKSLDREERQLYEMNLRAVDGGSPPHSGSAVL----------------RINVTDTNDNSPVFDQAEV-NVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGL------------VTVNGLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDI--VAP-VNGVIYISEASH--VNLPVALITVSDPDIGANGAVTCYIYNPEVPFQLKKLTY--------PNQYLLETRETLDYET-KNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVF------TEPTYKVSVPENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMFHMDP--------ETGIISLTEQLDREKKANYSFTILAK----------DQGIPVLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTV--GMVTVADSDEGENGRVRLSIL---GTDNRQLFSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEPVR-SSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTLP-GTIVTEVSAVDNDA-EINAELRYHIVGGNPHN----LFHIDPVIGNITLMEPL 768
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006996.1 (pep scaffold:Pmarinus_7.0:GL476780:2096:143714:1 gene:ENSPMAG00000006222.1 transcript:ENSPMAT00000006996.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 166.007 bits (419), Expect = 1.352e-41 Identity = 181/647 (27.98%), Postives = 291/647 (44.98%), Query Frame = 3
Query: 390 FQISCNNEEMQSNFIRVFVDDENDNNPVF--PIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLI-ITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKEN-VIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQL-YHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEES-RFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENI-NNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKE--------SIYSFIVVATDQGH-PNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESI 2282
F + E S + + + +ENDN P+F P+ ++ EN LG + A DLD F SY +S F L D LI + + LD E T +T T++A DG G G+ + I + D+NDN P F+R Y+ T +EN + P+ ++ TDED N +I + + + F++ ++ V LDYE++ + I+A DGG L+ST T +++ + ND SP F RN I +I E L+ + YV +D D Q SL I +E S +FR +N + + +T +DREA + I++ D D A++ I + DVNDN P + Y I EN ++F + AAD DL+ NG + Y I D N ++RI++ +GKI + ++E S+ S +V D+G P R ++S+T+ V ++D NDN P F +A V E + + Q+ ATD P+ + S + LD TG I T +DRE + + + + R L + + V D+ND+ PTF P++S + + +E++ + + S+
Sbjct: 2 FANETSGEHWGSARVHITLINENDNRPIFSLPLYN---VSVWENATLGTSVVQVLATDLDAGVFGQVSYHFS-----DDSDKFSL-----DPASGLISVAAALDFEATPRFTVTVMARDG-GGQETAGR--VRINLLDVNDNTPVFQRDSYVGTARENDNSLTPVVRVRATDEDSPPNNQITYSILPTSA--YSSYFSI-----TVSGGYGVVTLARALDYEKIPGGTISLTIMALDGGSPPLNSTVTAIVEVFDENDNSP--IFDRNSYSI----AIPENILAGATVLYVNATDGDQSPEYGQLSL-----IYSLEGSTQFR--INA-RSGDITSTTLLDREA-----VSQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPAWRDLPYAVTIVENTPGGTDIFT---VSAADPDLNENGTLVYAI-DPPNP----FYRINAASGKI-RTTGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPYALQVLEGLPANSTLFQVTATD----PDEGANGNVTYSMTAALPRPDFQLDAATGLITTLVQLDREAVAAYQLRLVATD--RGTPALSSTTTLSLVVLDVNDNAPTFH---PARSAVSL-MESVARDSVVISL 587 HSP 2 Score: 122.865 bits (307), Expect = 2.282e-28 Identity = 152/594 (25.59%), Postives = 250/594 (42.09%), Query Frame = 3
Query: 429 FIRVFVDDENDNNPVFPIVQTPYC-TIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITST--LDREKTSMYTFTLIAIDGVEGN-RNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDI------LDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNS----LSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN---QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPN-RLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS----------LPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN 2120
+ VF DENDN+P+F + Y I EN G + A D D S +L L + L S+ F + D ITST LDRE S Y + A+DG +GN + TG + I + D+NDN P + Y TI EN IF + D D +ENG + ++ +D ++ + GK++ ++ D + + IV R S +++AT+ + + +VND P + Q+ EG +N L V +D D N + PR ++ + + T +DREA + + +++ T D P L++ ++ +++ DVNDN P F + E++ V + +++ D D LN ++++ I F + ++G + S D E ++ YS ++ A D G R + ++T+ V + D NDN P F + + V ENV G +I Q+ ATD D + ++D F+V N +S LI+ R P+DRE + VE+ N
Sbjct: 228 IVEVF--DENDNSPIFD--RNSYSIAIPENILAGATVLYVNATDGDQ---SPEYGQLSLIYSLEGSTQFRINARSGD------ITSTTLLDREAVSQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPAWRDLPYAVTIVENTPGGTDIFTVSAADPDLNENGTL--------------VYAIDPPNPFYRINAASGKIRTTGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPYALQVL------EGLPANSTLFQVTATDPDEGANGNVTYSMTAALPRPDFQLDAATGL----------ITTLVQLDREAVAAYQL--RLVAT------DRGTPALSSTTTLSLVVLDVNDNAPTFHPARSAVSLMESVARDSVVI--SLNCTDADSGLNAELSFFITGGNQDGQ---FSVGFRDGLVRTVVSLDRETKASYSLVIEAIDNGPAGSRRTGTTTLDVLVLDVNDNRPLFLEGSYEVSVPENVTRGAIILQVQATDIDEGINGRVWYRIISGNQDGNFLV-----NVSSGLIS--------RGATPLDRETVALHALQVEAFN 752 HSP 3 Score: 100.138 bits (248), Expect = 1.809e-21 Identity = 134/578 (23.18%), Postives = 235/578 (40.66%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNA-----TFSVSSYKLELPFKLGNSS---------DFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKF----ERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE-QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFII-INDVNDNPPKFTQNVYYGQIEENINNHEVF--MNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESI----YSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFS-QSHFAFFVDENVEIGHLIGQINATDRD-SLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDRE 2081
+ + + DENDN P F E G + A D D +++ S F + N + DFE++ YL++ + D+ + R T +++ + D+ND P F E PI + E I + +D+D NG ++ + + F + D + +VR LD E Q + + I+A+D G L+ST T+ +++L+V+D P + S+ E I++ V+ SDA+ N C+ L L + F + + S ++R + + + ++ +TV+ D+ DN ++ I I+ I D NDN P F+Q Y +I EN N V +N I+A+D D +N + Y + ++ YF ID G + + ++E I ++ D G R +++ + V + D NDN P F+ S A ++ + +G + + A DRD + + +R+ + S + +D TG I T PID E
Sbjct: 1158 VLIRITDENDNAPAFGAATYEVLLTEGPSTAGVAVANVTASDPDEGDNARVVYAIVSGNTAATFGIDNGTGVLTAVKALDFEVSAGL-----YLLVVTATDQPRD-------------PARRLTSTATVSVHVADVNDVTPWFLRSYEGPI---DVSEGQPGPRIATFMASDQDSGLNGELEYSIIDGDPR---NEFVISPADGDL-----RVRRYVELDRETQAF--YNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVF------LNLPANASLSEAAAVLAIVSRVRASDANEGRN---CAAL-----LQHSPTSFCNGERAFYADSQTGLVYVNRPLDRERVAEYRLTLTVR-DNPDNPSYARKDSDIMIVTILDENDNSPVFSQVTYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAYSLL----GGSSAYFLIDRDRGNVSMALGQGLDREGIPGGRLELTILVQDGG---RRNATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDT----FGIDESTGLIVTVAPIDYE 1678 HSP 4 Score: 99.7525 bits (247), Expect = 2.352e-21 Identity = 133/569 (23.37%), Postives = 230/569 (40.42%), Query Frame = 3
Query: 429 FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYT-FTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERP--IYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAI--NNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFT--QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF------SQSHFAFFVDENVEIGHLIGQI-NATDRDSLPEHKDIRFIVKSDSQN-----RASKLITLDPLTGQIRTRYPI 2072
++ V V DENDN+P F + E+ G + + A D D + S + + L + GV + + EKTS + F ++A+DG R+T +++ + D+NDN P F P + ++ + + TD D NG++ ++ + G + + SIG +R N+D E ++ +VA D G LS +A +R+ + +VND P F+ Q + S+ E +A V+ ++ N + I I ++ F ++ L T+ + + + +T D+ PL A +++ + DVND+ P F N I E + V + A D D NG V Y S + FRI++ +G I +++ D E +++YS I++A+DQG P S+ + V + D +DN P F + +F + E+ G +G + A D D FI + N R L+ L L ++ Y I
Sbjct: 1824 YVYVNVTDENDNSPEFEAGSATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPRST-TFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQVTFRIESGGGDKL-----------SIGPSDGIIRVAPGANIDRET-RAAYTLMVVAVDRGNPPLSGSAIVRVLVDDVNDERPA--FLAPVQTV----SVLESLSVGSFVATVKATE-----NYKGHNTKYTYKIAGIGKNAF----TVHATSGLVTSTRLLKSYE-------RFNLTAVATDHGRP-PLWGQAGLYVEVLDVNDHRPVFVLPPNGTVVNITEVMP--VVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATSGIISTARALDRESQAVYSLILLASDQGQPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQSFSIPEHSPPGTAVGNVSGAVDADVGANAIVYYFIAAGNEGNKFNLSRWGLLVVLSDLDREVSPYYAI 2354 HSP 5 Score: 93.9745 bits (232), Expect = 1.362e-19 Identity = 178/711 (25.04%), Postives = 291/711 (40.93%), Query Frame = 3
Query: 258 FILDSDSNL-KVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPK----AQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREK--TSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDED----ENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILM---IEESRFRH------PVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNE-IPLNTN---ASIFIIINDVNDNPPKF-TQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVT--YHIQDFKNSSNAMYFRIDSQNG-KIYNSQSFDF-EKESIY-SFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF-SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYP--IDREKTSTITFF---VESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESI 2282
F DS + L V++ +DRE + ++ L + D + + S+ + V + DENDN+PVF V T I EN P G + + A D D + +Y L LG SS + L + V + + LDRE T++ DG G RN + + + D+NDN P F + EN I+V D D + G + + + G N F +D+S G + + +DYE + +VA D +++ LR+ + N++ ++ F Q ++ E + ++ V A M + L P IL+ E+ R + + Q + T +DREA DS ++ + D E I + TN A +++ + D NDN P+F + ++ E+ + +HA D+D NG V+ H I +++G I + DF EK S + F +VA D G P R S++ + V + D NDN P F S +A V E G L+ + ATD D+ P + + F ++S ++ +++ P G IR IDRE + T V+ NP L A++ + V D+ND P F + Q + LE+L G ++
Sbjct: 1440 FYADSQTGLVYVNRPLDRERVAEYRLTLT-------------VRDNPDNPSYARKDSDIMIVTILDENDNSPVFSQV-TYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAYSL-----LGGSSAYFLIDRDRGNV-SMALGQGLDREGIPGGRLELTILVQDG--GRRN-ATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGG----NDTFG---IDESTGLIV----TVAPIDYET-RPEYLLMVVATDQAPPFHTASCELRVSLQ--NELDEKLSFSLAAYQA----ALSEAAVPGTVVVRVA---APQM--KAPPKLPLPLAILVQKWHEDKRHKQQESDNAELIAALQGEITTQAALDREAT-----DSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPEFEAGSATLVEVRESAAPGTLLT--VLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPR-STTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQ-VTFRIESGGGDK----LSIGPSDGIIRVAPGANIDRETRAAYTLMVVAVDRGNPP-----LSGSAIVRVLVDDVNDERPAFL----APVQTVSVLESLSVGSFVATV 2082 HSP 6 Score: 93.9745 bits (232), Expect = 1.573e-19 Identity = 127/504 (25.20%), Postives = 209/504 (41.47%), Query Frame = 3
Query: 768 TEITIKIRDINDNAPKFERPIY--IRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNS---LSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLT--PRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLS----SSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLI----GQINATDRD---------SLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
T + I+I D NDNAP F Y + T + + + +D DE +N R+ + + N T I D G + A + LD+E + + A D R+ L+STAT+ + + +VND++P F+R+ + G + EG +I ++ SD DS +N +L+ S++ PRN +I + +R +DRE + + T+ D PLN+ ++ + + DV+DN P F + E + A++ + + + F N A Y DSQ G +Y ++ D E+ + Y + D +P+ S S +IV I D+NDN+P FSQ + + EN G ++ G I A+D D SL F++ D N + L GQ R I + +T V+ + +TV D+ND+ PTF
Sbjct: 1156 TSVLIRITDENDNAPAFGAATYEVLLTEGPSTAGVAVANVTASDPDEGDNARVVYAIVSG-----NTAATFGI-DNGTGVLTA----VKALDFEVSAGLYLLVVTATDQPRDPARRLTSTATVSVHVADVNDVTPW--FLRSYE---GPIDVSEGQPGPRIATFM-ASDQDSGLNGELEYSIIDGDPRNEFVISPAD--------GDLRVRRYVELDRETQAFYNL------TIMAKDMGTP-PLNSTLTVGVRVLDVHDNDPVFLNLPANASLSEAAAVLAIVSRVRASDANEGRNCAALLQHSPTSFCNGERAFY--ADSQTGLVYVNRPLDRERVAEYRLTLTVRD--NPDNPSYARKDSDIMIVTILDENDNSPVFSQVTYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAYFLIDRDRGNVSMAL-------GQGLDREGIPGGRLE-LTILVQDGGRRN------ATVRLGVTVLDVNDNTPTF 1610 HSP 7 Score: 79.7221 bits (195), Expect = 3.725e-15 Identity = 122/534 (22.85%), Postives = 212/534 (39.70%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRN-TGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE----QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDE-GTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYG------QIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSST--------------IIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRD 1955
+ V V D NDN P+F ++ E G + A D D + ++ F++ + +L+ DG+ + + +DRE + YT ++A+D GN +G + + + D+ND P F P+ ++ E++ V + E+ K HN+ ++ KI IGK V A + L + Y F VA D GR L A L +++L+VND P NG + +I E + +I+ + V + ++ S L + + FR +N + T + +DRE+ + S I++ D + + + ++++D++DN P F G I E+ N + A D D+ N V Y I N N S+ G + D E Y+ IV A+ +PN + +T + V ++D ND P F+ + V + ++G + Q+ A DRD
Sbjct: 1939 LSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDAD------AGPNGQVTFRIESGGGDKLSIGPSDGIIRVAPGANIDRETRAAYTLMVVAVD--RGNPPLSGSAIVRVLVDDVNDERPAFLAPVQTVSVLESLSVGSFVATVKATEN--------YKGHNT--KYTYKI-------AGIGKNAFTVHATSGLVTSTRLLKSYERFNLTAVATDHGRPPLWGQAGLYVEVLDVNDHRPVFVLPPNGTVV----NITEVMPVVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFR--INATSGI-ISTARALDRESQAVY---SLILL---ASDQGQPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQSFSIPEHSPPGTAVGNVS-GAVDADVGANAIVYYFIA-AGNEGNKFNL---SRWGLLVVLSDLDREVSPYYAIIVKASS--NPNWTPAVTTGPEFDPSKDRTLREVRVYLEDINDQWPVFTNHEYTAGVAVDAKVGSELLQLEAVDRD 2427 HSP 8 Score: 75.8702 bits (185), Expect = 4.772e-14 Identity = 150/625 (24.00%), Postives = 248/625 (39.68%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKL--GNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKF-ERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWIN--KIFTLDILDQSIGKVQAQVRAINN-LDYEQLYHSFEFKIVAQDGGRN---SLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDE----GTLSNKILAYVQVSDADSMINQ-LQCSLLTPRNI-LMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNA-AIHAADKDLHL--NGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPE------------HKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN--PSRIFNDLIQE--AMIVITVRDLNDSPPTF 2204
+ V V D ND P F + E +P G RI A D D S EL + + G+ + E DG + LDRE + Y T++A D N+ T + +++ D++DN P F P + ++ + ++ +D +E N L+ +S + N + F D Q + +N LD E++ + + +D N + + + + IL+ ND SP Q+T I E GT+ + + SDAD +N L SLL + +I+ R S+ Q +DRE + ++ +T+ D N + + + DVNDN P F + EN + V + + A D+DL + G V Y I N + F ID G I D+E Y +VVATDQ P ++S + V ++++ D FS + + + E G ++ ++ A + P+ H+D K Q + + L G+I T+ +DRE T + V S++ P L + A + + V D ND+ P F
Sbjct: 1268 VSVHVADVNDVTPWFLRSYEGPIDVSEGQP-GPRIATFMASDQD------SGLNGELEYSIIDGDPRN-EFVISPADGDLRVRRYVELDRETQAFYNLTIMAKDMGTPPLNSTLT-VGVRVLDVHDNDPVFLNLPANASLSEAAAVLAIVSRVRASDANEGRNCAALLQ--HSPTSFCNGERAFYAD--------SQTGLVYVNRPLDRERVAE-YRLTLTVRDNPDNPSYARKDSDIMIVTILDENDNSPVF------SQVTYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAYFLIDRDR--------GNVSMALGQGLDREG----IPGGRLELTILVQDGGRR---NATVRLGVTVLDVNDNTPTFNVTSQTAHVLEN--SPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDT----FGIDESTGLIVTVAPIDYETRPEYLLMVVATDQAPPFH-TASCELRVSLQNELDEKLSFSLAAYQAALSEAAVPGTVVVRVAAPQMKAPPKLPLPLAILVQKWHED-----KRHKQQESDNAELIAALQGEITTQAALDREATDSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPEF 1839 HSP 9 Score: 75.8702 bits (185), Expect = 5.063e-14 Identity = 117/527 (22.20%), Postives = 211/527 (40.04%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIIT-STLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWI-NKIFTLDILDQS--IGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGG-RNSLS-----STATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQL--------QCSLLTPRNILMIEESRFRHPVNIYKQ-FSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNG--KIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATD 1949
+ V V D NDN P F + +E + +G + + KA D D + + + G + F + D LI+T + +D E Y ++A D +T E+ + +++ D F Y + E + + + V ++ L + Q+W +K D + I +Q ++ LD E S+ ++++DGG R +++ A + + + + ND SPE F + + E +L + +D D+ N + + P+ IL+I+ V++ K F +T+Q I + V D P +T ++ +I+ DVNDN P F Y + + A++ A D D NG+VT+ I+ S I +G ++ + D E + Y+ +VVA D+G+P LS S+ + V + D ND P F V E++ +G + + AT+
Sbjct: 1596 LGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSI--ASGGNDTFGI-----DESTGLIVTVAPIDYETRPEYLLMVVATDQAP-PFHTASCELRVSLQNELDEKLSFSLAAYQAALSEAAVPGTVV-VRVAAPQMKAPPKLPLPLAILVQKWHEDKRHKQQESDNAELIAALQGEITTQAALDREAT-DSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPE--FEAGSATL---VEVRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFI-------------LFRIVALDG--GSPPRSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLV-ASVWATDADAGPNGQVTFRIE----SGGGDKLSIGPSDGIIRVAPGANIDRETRAAYTLMVVAVDRGNPP-LSGSAIVRVLVDDVNDERPAFLAPVQTVSVLESLSVGSFVATVKATE 2086 HSP 10 Score: 74.7146 bits (182), Expect = 1.029e-13 Identity = 72/259 (27.80%), Postives = 114/259 (44.02%), Query Frame = 3
Query: 1473 PLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFE-KESIYSFIVVATDQGH--PNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTR--YPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQL 2234
P S+ I I D NDN P F Y + E + V + A + A+D D N +V Y I + + A F ID+ G + ++ DFE +Y +V ATDQ RL+S++T+ V + D ND P F +S+ + G I A+D+DS + I+ D +N + P G +R R +DRE + + +K+ L + + V D++D+ P F L P+ + L
Sbjct: 1151 PAQATTSVLIRITDENDNAPAFGAATYEVLLTEGPSTAGVAV-ANVTASDPDEGDNARVVYAI---VSGNTAATFGIDNGTGVLTAVKALDFEVSAGLYLLVVTATDQPRDPARRLTSTATVSVHVADVNDVTPWFLRSYEGPIDVSEGQPGPRIATFMASDQDSGLNGELEYSIIDGDPRNE----FVISPADGDLRVRRYVELDRETQAFYNLTIMAKDMGT--PPLNSTLTVGVRVLDVHDNDPVF-LNLPANASL 1398 HSP 11 Score: 65.4698 bits (158), Expect = 7.897e-11 Identity = 116/509 (22.79%), Postives = 196/509 (38.51%), Query Frame = 3
Query: 423 SNFIRVFVDDENDNNPVF-PIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRN-TGKTEITIKIRDINDNAPKFERP---IYIRTIKENVIVDPIFQILVTDEDEDENGRIDLK-MHNSG---QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRN-SLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVS-DADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIF------------IIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTY------HIQDFKNSSNAMY--------FRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVR 1838
S +RV VDD ND P F VQT ++ E+ +G + K AT + + + +K+ H G ++TST R S F L A+ G G+ + +++ D+ND+ P F P + + +V I ++L D DE +NG + +H G ++W + F ++ I +A LD E + ++A D G+ S ST L++ + +++D P + +G FSI E + + V + DAD N + + N E ++F N+ + L ++DRE + + I V+ N P T F + + D+ND P FT + Y + + + + A D+D+ N V Y +I+ NSS MY R ++G + F + VVA D N ++ I+R
Sbjct: 2043 SAIVRVLVDDVNDERPAFLAPVQT--VSVLESLSVGSFVATVK------ATENYKGHNTKYTYKIAGIGKNAFTVHATSG----LVTST--RLLKSYERFNLTAVATDHGRPPLWGQAGLYVEVLDVNDHRPVFVLPPNGTVVNITEVMPVVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDW--ESFRINATSGIISTARA-------LDRES-QAVYSLILLASDQGQPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQSFSIPEHSPPGTAVGNVSGAVDADVGANAIVYYFIAAGN----EGNKF----NLSRWGLLVVLSDLDREVSPYYAI------IVKASSNPNWTPAVTTGPEFDPSKDRTLREVRVYLEDINDQWPVFTNHEYTAGVAVDAKVGSELLQ--LEAVDRDVGNNSIVLYRILSILYIKHSSNSSTRMYNIFTLGRCARAGERDGILRTYDLFTAYGPGYFMLEVVAADLAGHNDTATVGVYILR 2511
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Sea Lamprey
Match: si:ch211-199f5.1 (protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]) HSP 1 Score: 163.31 bits (412), Expect = 2.607e-41 Identity = 163/617 (26.42%), Postives = 277/617 (44.89%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVD--DENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFK-DGVPY--LIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQIL-VTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQL-QCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFII-INDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHF-----AFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRT 2060
+ + ++D + + IDRE+ C G +C ++ F + C + V+ D ND+ P F + + I E+ LG R+PL A+DLD ++ +Y L+ + F LA + DG Y L++ S LDRE+ YT L A DG + R +G T + I + D NDN+P F + T++E+ + L TD DE NG + + + ++F LD GK+ + LD+E L +E I A+D G +S+ + + + + ++ND +PEI+ Q + EG + V VSD DS N L C L + ++ +R + + T ++DRE + D +++ D P A F + + D NDN P+F ++ Y + EN N+ ++ + A D D NG + Y++ + +S + Y I+ +G IY + D+E + +F V A D G P L +++T+ VRI D+NDNAP + + + +G+L+ + A D DS + IV+ + +N L ++ L G++ T
Sbjct: 75 VHVEEADGTVSAREVIDREQQC------------GQAPSC--VIRFDVLCTLPRGLFQLVHAEVELLDINDHAPDFARSEM-HVEISESVALGTRVPLEGARDLDVGGNALRAYHLD------ENERFGLALRARTDGAKYAELVVKSRLDREQEGEYTLQLTAWDGGDPPR-SGTTLVRITVLDSNDNSPVFAQTSCNVTVREDATPGTVLLTLNATDVDEGPNGEVVYSFSSPVDAEVRRLFQ---LDPKTGKLSLK----GQLDHE-LNSEYEISIQARDMGPSSIPAHCKVLVHVEDINDNAPEIKLDFIMQSRGDTVFVSEGAAYESFVGLVTVSDIDSAENGLVACHLRGHPHFKLLP---YR------DDYVVVTNSSLDREQ----MADYFLVLEAS----DGGTPPRVAARQFTVRLLDENDNEPRFHRSTYEASLLEN-NSPGAYVT-TVTAWDADAEHNGMIAYNVVESEVAGASVSTYVSINPSSGAIYALRPLDYEAMTSLTFQVQARDDGVPP-LVTNATVSVRIVDENDNAPVVTHPPLRNGTGVVRLPRDAGLGYLVTVVRARDSDSEANGELSYRIVQGNERN----LFRINRLGGEVFT 637 HSP 2 Score: 95.9005 bits (237), Expect = 2.335e-20 Identity = 116/488 (23.77%), Postives = 216/488 (44.26%), Query Frame = 3
Query: 780 IKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTP-----RNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENI-----NNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRF--IVKSD-SQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
+++ DIND+AP F R I E+V + L D D G L+ ++ + N+ F L + ++ G A++ + LD EQ + ++ A DGG S T +RI +L+ ND SP Q + ++ E +L + +D D N ++ S +P R + ++ K L +D E N + I ++Q D + IP + + + + D+NDN P+ + + + +E F+ + +D D NG V H++ + + +R D + + S D E+ + Y ++ A+D G P R+++ VR+ D+NDN P+F +S + + EN G + + A D D+ EH + +V+S+ + S ++++P +G I P+D E +++TF V++++ L+ A + + + D ND+ P
Sbjct: 124 VELLDINDHAPDFARSEMHVEISESVALGTRVP-LEGARDLDVGGNA-LRAYHLDE---NERFGLALRARTDGAKYAELVVKSRLDREQ-EGEYTLQLTAWDGGDPPRSGTTLVRITVLDSNDNSPVF------AQTSCNVTVREDATPGTVLLTLNATDVDEGPNGEVVYSFSSPVDAEVRRLFQLDP----------KTGKLSLKGQLDHELNSEYEI------SIQARDMGPSSIP--AHCKVLVHVEDINDNAPEIKLDFIMQSRGDTVFVSEGAAYESFVGL-VTVSDIDSAENGLVACHLRGHPHF-KLLPYRDDY---VVVTNSSLDREQMADYFLVLEASDGGTPPRVAARQ-FTVRLLDENDNEPRFHRSTYEASLLENNSPGAYVTTVTAWDADA--EHNGMIAYNVVESEVAGASVSTYVSINPSSGAIYALRPLDYEAMTSLTFQVQARDDG--VPPLVTNATVSVRIVDENDNAP 571 HSP 3 Score: 82.0333 bits (201), Expect = 4.728e-16 Identity = 66/239 (27.62%), Postives = 115/239 (48.12%), Query Frame = 3
Query: 1512 DVNDNPPKFTQNVYYGQIEENIN-NHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRID-SQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIK--DQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN--PSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
D+ND+ P F ++ + +I E++ V + A D D+ N YH+ + + A+ R D ++ ++ D E+E Y+ + A D G P R S T +VRI D NDN+P F+Q+ V E+ G ++ +NATD D P + ++ + S +L LDP TG++ + +D E S +++++ PS I +++ V D+ND+ P +L
Sbjct: 128 DINDHAPDFARSEMHVEISESVALGTRVPLEGA---RDLDVGGNALRAYHLDENERFGLALRARTDGAKYAELVVKSRLDREQEGEYTLQLTAWDGGDPPR---SGTTLVRITVLDSNDNSPVFAQTSCNVTVREDATPGTVLLTLNATDVDEGP-NGEVVYSFSSPVDAEVRRLFQLDPKTGKLSLKGQLDHELNSEYEISIQARDMGPSSI----PAHCKVLVHVEDINDNAPEIKL 355
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 164.466 bits (415), Expect = 3.179e-41 Identity = 160/596 (26.85%), Postives = 251/596 (42.11%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKH--FKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMI--NQLQCSLLTPRNILMIEESRF-RHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+RV V D NDN P FP +E+ +G ++ L A D D V+ + ++ GN + K +L T LDRE Y + A DG R G+ ++ + ++D NDN P FE+P Y ++ E+ V + L+ GR L + D G V + LD+E + + A DGG LS AT IQ+L+VND P IRFV S+DE + A V V+DADS +L S++ E F H + L+ +DRE + + T+ D + + AS+ + +NDVND+ P+F + Y + E + + A D D LN K+ Y I + ++ +F +D G + D E S + A DQG + + +S + V + D ND P F+Q+ + EN G + ++A D D L E+ +R+ D + ++ LD LTG++ T +DRE+ V++++ R L A + + V DLND+ P F
Sbjct: 9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKI--VSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDG-GSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALRDLL------HRGRGPLAVP---------------FDPKTGMVSTR----QPLDFEA-RRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSA-SVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGN-----ERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNL------TILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKD--VTAMDADSGLNAKLRYSI---VSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTS-LTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSD-LGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQD--RGSPPLGSTAKVTVVVGDLNDNHPVF 554 HSP 2 Score: 153.68 bits (387), Expect = 6.997e-38 Identity = 136/520 (26.15%), Postives = 239/520 (45.96%), Query Frame = 3
Query: 669 LIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRI--DLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQ-LQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKD 2216
+ + +DRE+ + Y ++A G G+ +++ + D+N++AP F+R Y +I E+ V+ F + TD+D +NG + ++ N G+++ IF Q+ LD E + + A D G LSS+ T+ + +L+VND P + N F E ++ VQ +DAD+ N + S P+ ++ R SLR DREA + +V D PL A++ + + DVNDNPP+F ++VY + E+ +N + + A+D D +NG + Y I + F +D+ G+I S D E+ + Y+ +V ATD G + L++S T+ V++ D+NDN P+F++S + E+ +G L+ + A+D D+ P D+R+ + + + + +D TG + +D E V +++ R ++V+ VRD ND+PP F D
Sbjct: 713 IFTANAIDREEQAFYQLRVVANSG----GVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKF--GIFP-----------DGQLYVRYELDRET-REEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKP----LFNSSSYV--FHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVNFELDSETGR-------IASLRV---FDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLR--VTASDVDEGVNGALRYAINEGNEGGK---FTVDASTGQITLLGSLDREETASYTLVVSATDSGT-SPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPS-GDVRYAIVAGNTH---ATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRS--SATILVVHVRDFNDNPPAFLPGD 1186 HSP 3 Score: 149.443 bits (376), Expect = 1.613e-36 Identity = 184/721 (25.52%), Postives = 315/721 (43.69%), Query Frame = 3
Query: 228 FMSTVINN---GLFIL-----DSD--SNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCH-----------ILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITS-TLDREKTSMYTFTLIAIDGVEGN-RNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQ------EWIN-KIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQI--EENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEK------ESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICE 2276
+++T + N GLF++ DSD N V D + + M +L+ + G + T ++ Q + + + V V D NDN+PVF VQ + +I EN+P G + A D D Y+L G+++ F++ + V + T +LDRE+ ++Y + A+DG G+ R +TI + D D P F R Y + ENV + V+ D N + + + Q EW +IFT + +D+ EQ + ++ ++VA GG ++ A++ + + +VN+ +P F R ++ SI E N V+ +D DS N I E I+ L +DRE E + + TV D E PL+++ ++ + + DVNDN P F + Y E+ + + + A+ A D D NG VTY + + + F +DS+ G+I + + FD E + +SF VVATD G P L +T+ V ++D NDN PQF++S + V E+ + ++ A+D D + +R+ + + N K T+D TGQI +DRE+T++ T V + + + L + + V D ND+PP F ++ ++S++ L+ ++ E
Sbjct: 451 YVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQY-FASILENEPGGTAVTTVTATDPDRGANGTVRYQL----TAGDAARFQV-----NAVTGAVSTRVSLDREERAVYQLQVTALDG--GHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGS-VSASTLDLNANVTYLIVSGDQRGSFSIEWSGGRIFTANAIDRE----------------EQAF--YQLRVVANSGG---VAGEASVSVLVHDVNNHAPV--FDRASYEV----SIAEDEPVNSRFFSVRATDKDSGKNG--------EVKYEIGEGNGGEKFGIFPDGQLYVRYELDRETREEYSL------TVSAMDTGVE-PLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGS----LVGAVQATDADAGSNGGVTYSFEKPQ-----VNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDE-GVNGALRYAI--NEGNEGGKF-TVDASTGQITLLGSLDREETASYTLVVSATDSGT--SPLAASCTVAVQVLDENDNPPRF-------TESLLSVDALESTRVGE 1094 HSP 4 Score: 146.362 bits (368), Expect = 1.479e-35 Identity = 153/615 (24.88%), Postives = 260/615 (42.28%), Query Frame = 3
Query: 426 NFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP------IFQILVTDEDEDENGRIDLKMHNS-GQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP--LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQ------DFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN---PSRIFNDLIQEAMIVITVRDLNDSPPTFRLK 2213
N + + V+D NDN PVF + + +EEN G I A D D ++ +Y + + S+ GV L + LDRE+ + Y T+ A DG +++ +RD NDN+P+F R Y + E+ D I +L D D G + + S +W + F L V + LD E + + A DGG L++TA L + +L+ ND +P + Q + + E L + +D D +N +L+ S+ + E RF + L + +DRE S + V+ D P L++ + +I+ DVNDN P FT E++ V A + A D D N V Y + + F +++ G++ + D E Y+ V+A D+G P L+S++T+ V + D NDNAP+F + + + E+ G + +++A D D + ++R+ + S + LDP+ G + P+DRE+T++ V +++ P+R A + +T+ D+ND P F+L
Sbjct: 1500 NQVEISVEDVNDNPPVFAVPEM-ELEVEENTGEGEVIFTLSATDADQGQNALVTYSVL------SGSEGAFVVDAASGV--LRASRRLDREERASYLLTVRASDGTHAT----DARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLH-------PVTGALNVTRPLDRES-RACYVLRARATDGG--GLAATARLYVNVLDANDNAPSV------QNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISS-----GDPEGRF----AVGNDGQLSVARALDRERQ------SFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVGAVV---ATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPP-LTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDE-GANGELRYDIASGDP---TGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPAR-----SDTASVRVTLSDVNDCSPAFQLS 2057 HSP 5 Score: 139.813 bits (351), Expect = 1.531e-33 Identity = 175/658 (26.60%), Postives = 282/658 (42.86%), Query Frame = 3
Query: 270 SDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPY-CTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAID-GVEGNRNTGKTEITIKIRDINDNAPKFERPIYI-RTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYH-----SFEFKIVAQDGGR-NSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTST---ITFFVESKN-PSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
S + + IDREE Q QL V S + V V D N++ PVF + Y +I E++P+ R +A D D S E+ +++G + E F DG L + LDRE Y+ T+ A+D GVE + + + + D+NDN P F Y+ +E + + + TD D NG + + +N F LD G++ A +R D E L SF F +VA DGGR L AT+++ + +VND P+ F ++ Q S+ E + L V SD D +N + N E +F + Q +L ++DRE + + V D PL + ++ + + D NDNPP+FT+++ E+ E+ + + A+D+D +G V Y I +++A F ID G ++ ++ DFE + +Y V A D G P R SS++ ++V ++D NDN P F + EN+ IG + + A D D+ + ++ + + Q T+DP +G+I T IDRE T +T K P ++ +++T D ND+ P F
Sbjct: 709 SGGRIFTANAIDREE----QAFYQLRVVANSGGVAGEA---------------SVSVLVHDVNNHAPVFD--RASYEVSIAEDEPVNSRFFSVRATDKD------SGKNGEVKYEIGEGNGGEKFGIFPDG--QLYVRYELDRETREEYSLTVSAMDTGVE--PLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFE---KPQVN--FELD---SETGRI-ASLRV---FDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQ--FAKSVYQA----SVSESASNLTQLLRVTASDVDEGVNGALRYAINEGN----EGGKFTVDAST-GQITL--LGSLDREETASYTL------VVSATDSGTS-PLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLIT--LTASDEDTGPSGDVRYAI--VAGNTHAT-FAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPR-SSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDA-DVNGELHYSIA--RQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVT--DENDNAPRF 1292 HSP 6 Score: 132.109 bits (331), Expect = 3.504e-31 Identity = 149/596 (25.00%), Postives = 255/596 (42.79%), Query Frame = 3
Query: 450 DENDNNPVFPIVQTP----YCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNS-SDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQ-ILVTDEDEDENGRIDLKMHNSGQE--WINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSP---EIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
D NDN+P V P +++E+ G L D D+ T ++ +L + GN F L G+ L + S LDRE+ MY T++A D + + + + + D+ND+AP+F Y + E + + D D N ++ + SG + W + +D+S G V +D E + S I AQD G ++ +L + +L+VND P + ++V E +L + V +D+D N P E FR K + T +++DRE E + + VQ D + PL + A + +++ D+NDN P F Y+ I E N + A D D NG V Y + + +A F++++ G + S D E+ ++Y V A D GH R S + + + + D D P F++ ++F V ENV G L+G ++A+ +L + ++ +++ S Q R S +++ G+I T IDRE+ + V + + + EA + + V D+N+ P F
Sbjct: 217 DVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPT---ANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIV-SGNDLGWFS-------VDESTGLVTTD----GKVDRE-VASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAV---------ENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYRE-MFRLDSLTGK---VTTLKSLDREELEEYPL------VVQAQDRGSP-PLGSTAKVTVVVGDLNDNHPVFYPVQYFASILE--NEPGGTAVTTVTATDPDRGANGTVRYQL----TAGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGH-LRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSAS---TLDLNANVTYLIVSGDQ-RGS--FSIEWSGGRIFTANAIDREEQAFYQLRVVANS-----GGVAGEASVSVLVHDVNNHAPVF 758 HSP 7 Score: 97.0561 bits (240), Expect = 1.738e-20 Identity = 70/248 (28.23%), Postives = 115/248 (46.37%), Query Frame = 3
Query: 1473 PLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVE-----IGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPT 2201
P+++ + I + DVNDNPP F ++EEN EV + A D D N VTY + S A F +D+ +G + S+ D E+ + Y V A+D H ++ + + V ++D NDN+P+FS+ ++F V E+ +IG + A D DS P + + S+ + A L P+TG + P+DRE + + + L A + + V D ND+ P+
Sbjct: 1495 PMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFT--LSATDADQGQNALVTYSV--LSGSEGA--FVVDAASGVLRASRRLDREERASYLLTVRASDGTH----ATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATD----GGGLAATARLYVNVLDANDNAPS 1728 HSP 8 Score: 61.6178 bits (148), Expect = 1.102e-9 Identity = 63/248 (25.40%), Postives = 99/248 (39.92%), Query Frame = 3
Query: 1494 IFIIINDVNDNPPKFTQ-NVYYGQIEENIN-NHEVFMNAAIHAADKDLHLNG--KVTYHIQDFKNSSNAMYFRIDSQNGKIY--NSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITF---FVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
+ +++ DVNDN P F + V +E+ +V ++ A+ D+D+ NG Y I + R ++ ++ + D E Y+ V A D G P R + V ++D NDN P F + + V E+ +G + RD L H+ R + DP TG + TR P+D E T + NP L A VI + D+ND+ P R
Sbjct: 9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAV---DRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQ-VNVTVQDANDNPPAFEKPAYRASVAEDSPVGAAL-------RDLL--HR-----------GRGPLAVPFDPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPP-----LSGRATAVIQLLDVNDNDPAIRF 227 HSP 9 Score: 59.3066 bits (142), Expect = 6.120e-9 Identity = 116/535 (21.68%), Postives = 204/535 (38.13%), Query Frame = 3
Query: 669 LIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGG---RNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDV--NDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRI---DSQNGKIYNSQ------SFDFEKESIY----SFIVVATDQGHPN----RLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ + LD E +Y + A DG R++ T + + +RD NDN P F +I EN+ I + + D D D NG + + Q FT+D ++ +D E FE + A D S+ + + + + ND +P RFV + G G+ ++ +Q SD D N +T + ++ R + + T+ +DRE+ + V + P A II N + N P+F Q+ E IN + I L L H D++ ++F + ++ + N SFD ++ S + D G + +SS + + + ++D NDN P F+ V+EN G +I ++ATD D ++ + + V S S+ +D +G +R +DRE+ ++ V + + + +A + + VRD ND+ P F
Sbjct: 1134 VFLARRLDFETQRLYRLNVSAEDGGRPPRSS-ATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIAR--QFPPGAHFTID-------PESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAP--RFVTPTAILVDGLRAAAGS----VVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTGI-------IETSTELDRESGH-----GAFTLEVVAVEAKAAAPRTQRAENTIIANSMTFNHPLPRFPQD-----YESPIN---LLQGQTIPMPSSYLFLR-----HHLDWEPEGQLVFFTLLLGVTRGHGVINPLDAPWRVSFDLTARCMFIVFSSLLSSLRDNGAGSFIRPPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQ-GQNALVTYSVLSGSEG----AFVVDAASGVLRASRRLDREERASYLLTVRASDGTH-----ATDARLSVAVRDANDNSPRF 1617 HSP 10 Score: 55.8398 bits (133), Expect = 6.507e-8 Identity = 46/165 (27.88%), Postives = 70/165 (42.42%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP--IFQILVTDEDEDENGRI 920
+ V V D NDN P FP + I E++P G + A D D Y + G DF L L + LDRE+T+ Y + A DG G + + + + D+ND +P F+ Y +EN P I Q++ D+D +G++
Sbjct: 1935 LAVTVGDANDNAPRFPRREY-EAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTG---DFRLDPVLG----TLAVARPLDRERTASYELAVRARDG-GGPARSDTASVRVTLSDVNDCSPAFQLSPYTVHARENTQGPPVLILQVVARDDDLGSSGQV 2090
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 155.221 bits (391), Expect = 9.941e-39 Identity = 181/690 (26.23%), Postives = 286/690 (41.45%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVC---GSIHTCCHILDFQISCNNEEMQSNFIRVF-----VDDENDNNPVFPIVQTPY--CTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLEL---------PFKLGNSSDFELAKHFKDGV-------PYLIITSTLDREKTSMYTFTLIAIDGVEGN-RNTGKTEITIKIRDINDNAPKFERPIY--IRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDIL--DQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVR-NGQQIT-GGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQ--------NVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNS-SNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF------SQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
L V+ ++DRE LC ++ C G +HT Q++ + S+ +R+ V D ND+ P F + P+ +I E++ +G R+PLP+A D D T S+ Y++ PF L S D + L + LDRE Y L DG GN + +G +TI + D NDNAP F P +R + + + + Q+ D D NG I H + + T L D + G V VR LD E + +VA+DGG+ S S++ T+ +++ + ND +P + G+ + GG I E S + + VSD D L S + + P + QF L+TT+ +D E + + V D P L+ ++ I + D+NDN P F VY + EN V +N + A D D NG +T+ + + S A F ++ + G++ + D EK Y V A D G P R + + + V + D+NDNAP F + + FFV+E +G +G ++ +D D + +V+ + D G +RT +DRE V + + R L + ITV D ND+ P
Sbjct: 83 LSVALRLDREALC-----MEEPDACRSTGFMHT------VQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAF---RAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDG--GNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTK----LTSLATQAALHVDGTTGLV--TVRNAEKLDRETM-PVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPD-----LGSSGTVDVRLEFPTGAELASPNKV--QFLLKTTRLLDYEEAQQY--------NVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLN--LLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQR-KARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGG--AGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGR--PALSASCRVSITVSDTNDNAPVI 727
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9]) HSP 1 Score: 186.037 bits (471), Expect = 1.185e-47 Identity = 195/660 (29.55%), Postives = 295/660 (44.70%), Query Frame = 3
Query: 312 ELCPPQMMLQLNKVCGSIHTCCHI-------LDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCT--IEENKPLGYRIPLPKAQDLD---NAT--FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITST-LDREKTSMYTFTLIAIDGVEGNRNT----GKTEITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEW----INKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFV----RNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFII-INDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
E P Q N G I T I + Q+ N Q ++V VDD NDN P FP T Y T I E+ + P+ A D D N T ++++S F LG ++ G +IT LDRE T Y + A D R T G I I I D ND+AP F + Y+ +I EN I ++ D D NG I + +W N IF LD S G + R NLD+E + +S+ F ++A DGG S + AT+ I +L+ ND SP+++ NG + E +L N +AY+ V+D DS N +T + +E F+ V + ++ + +DRE PF + + D +P + +I + DVNDN P FT N Y I E N + ++A D D NG V+Y I ++ +F++D Q+G + ++ D E+ S + + A D G + + S+T+ V I D NDN P+F +S + + E IG + Q++ATD DS + I SD+Q + L L+ TG + T+ +DRE S +F V +K+ L+ + +T+ D+ND+ P F
Sbjct: 36 EGSPKQ--FGFNSNTGVISTTARIDRETTTQISLQLRTLNPSNQPISVQVQVDDINDNEPRFP---TLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTA-------CPTGSTLCVITKKPLDRETTDFYQLNITATD-----RGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAI-----DWDAIQSNSIFDLD---SSTGVI----RTKQNLDFE-VKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAI----RSENSLINTNIAYILVTDKDSNTNSQTELKITNGD----DEGCFK--VEFLGFYFIQLQKPLDREL-VPFY-------NLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQ--LNATDPDEGDNGTVSYSI---TGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPK-TGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQ--VNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGD--PQLMSSVKVELTISDINDNAPVF 637 HSP 2 Score: 114.005 bits (284), Expect = 1.817e-25 Identity = 157/577 (27.21%), Postives = 255/577 (44.19%), Query Frame = 3
Query: 252 GLFILDSDSNL-KVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPY-CTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHF----KDGVPYLIITSTLDREKTSMYTFTLIAID-GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNA-MYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS 1958
G F +D S L +K +DRE Q++ V +I H + + S + V + D NDN P F +++ Y TI E +G + A D+D+ +Y++ +SSD ++ F + GV L S LDRE S+Y+FT++A D G ++ K E+TI DINDNAP F Y +I EN + Q+ TD DE N I + N F+ +D S G + + +LD+E + F I A+DGG + TA + + +LN D P F+ T ++ +GTL ++ Y D + I+ S P N+ +++ + +N ++DRE +L+ +I V PL+ A++ I + D NDN P+F+ + I+ +V NAA A D D NG V Y + +SNA I+S +G I ++ E+ Y+ V+A+D G P + ST+ + I ++ P+F+ S + V + + + + A D+DS
Sbjct: 471 GWFQVDFQSGLVTTAKPLDRE---------QVSSVTITITAQDH-------GSAPKTGSTTVTVTIIDGNDNKPRF--MKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEI-------SSSDAQVNGLFELNTQTGV--LWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTIS--DINDNAPVFYPVEYFASIMENEPPGKLLQVTATDADEGTNAVISYDIIGGNN---NGNFS---IDSSTGVIS----TLASLDHE-VEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLP--VFLYEMYNFTVYENVPKGTLVGRV--YATTKDKNGSISYAIVS-GDPTNLFLVDSTGGIIKIN----------GDMDREEKAQYLL--AVIARVGTVK-----PLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAA--AVDLDAGKNGLVRYQL-----TSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQ---HSTMTIHITLSINHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDS 975 HSP 3 Score: 110.538 bits (275), Expect = 2.205e-24 Identity = 172/654 (26.30%), Postives = 267/654 (40.83%), Query Frame = 3
Query: 297 QIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSN--FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLG--YRIPLPKAQDLDNATF---SVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGN-RNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYE--QLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSP------EIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNA-AIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQN-DNAPQFSQSHFAFFVDENVEIG-HLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTST----ITFFVESKNPSRIFNDLIQEAMIVITVRDLN 2186
++DREEL K GS +I+ + N+ ++ + + V V D NDN PVF E + P +RI A + DNA F VS ++ F ++ + L+K TLDRE TS Y + A D N +T K EIT+ D ND P F Y I E+ ++ + + +D+D +NG I + N + +F ++ ++ +LD+E QLY E I AQD G LSST + + +L+VND +P VR + + GF + T S++ A SM +Q TP + + + T ID E P DS +V + D L+T SI + + D NDN P F + +N I A D D + NGKVTY I S N YF + G++ + +IY + A+D G P+R + T++ K+ P FS + + V EN G ++ + A + SL + +I + + SDS +++ TG ++T IDRE + + V+ + PS A + ITV+D+N
Sbjct: 1110 RLDREELI---------KNTGS---NVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHLSK-------------TLDRETTSSYNLVVKATDASNANLYSTAKIEITVG--DSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGN---LAAMFDVE-------SATGRLIVAKSLDFETTQLY---ELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVR--ENVNTGFPVGRCTASDRDTG-TNAHIAFSMYSQ------TPSKTFSVNSATCE----------ITTIAAIDLET-MPAGRDSFQLVVMATDQ--GSPKLSTRKSITVQVTDENDNSPGF--------VSPPAAAAGSSLNVMTITAEDPDRNSNGKVTYSII----SGNNGYFNLHPSTGQLQMIHQIP-DNPTIYQLTIQASDGGQPSR--QTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSL--NGNIEYYLTSDSSKGGFEVV---KSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSA----RTSSATVTITVQDVN 1677 HSP 4 Score: 108.612 bits (270), Expect = 7.297e-24 Identity = 160/661 (24.21%), Postives = 280/661 (42.36%), Query Frame = 3
Query: 255 LFILDSDSNL-KVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLE-----LPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAID-GVEGNRNTGKTEITIKIRDINDNAPKFERPIYI-RTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFII-INDVNDNPPKFTQNVYYGQIEE-NINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAM-YFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
LF++DS + K++ +DREE Q +L + G++ L Q + N E + D NDN P F + I+ +G + A DLD + Y+L L + S +LA+ DG + YT ++A D G +T IT+ I ++ PKF Y+ + + F ++ D+D +NG++ + +E + IF GK+ + + + L S++ + A DGG S S++ + I I + ND FV N + + GTL ++A+ S + SL++ ES F V + + T +DRE E + +Q + N+ + + +I I+ + D+NDN P F++ VY + E ++ VF I A D D N K Y + S M F I+S G+++ S++ D E S Y+ +V ATD + N L S++ I + + D ND P F +S + + E+ IG L+ +NA+D+D + ++ I++ + S + + ++ TG++ +D E T + +++ I L + + V D+ND+ P F
Sbjct: 786 LFLVDSTGGIIKINGDMDREEKA--QYLLAVIARVGTVKP----LSAQATVNIEVL----------DRNDNAPQFS-TSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDG-------------DETQYTVQVLASDSGSPPQHSTMTIHITLSI----NHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIF-------PGGKLYIRKSLL-----QALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRS--LFVNNTFRFAVAENSSPGTLVGTLVAHAL---DHSRTKDIVYSLIS-------SESHFAVDV---RSGQITTRVRLDRE--ELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFR---IKAMDADEGDNAKFFYSLV----SGTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNAN-LYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKD-IGQNGLIKYSI---SNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLI--PLSSTVNVTVNVLDVNDNAPLF 1369 HSP 5 Score: 107.842 bits (268), Expect = 1.267e-23 Identity = 145/550 (26.36%), Postives = 235/550 (42.73%), Query Frame = 3
Query: 426 NFIRVFVDDENDNNPVFPIVQTPYCT-IEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITST-LDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNI---LMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIR 2057
F+ + V D NDN+P F Y I E G + A D D SY + LG F++ F+ G L+ T+ LDRE+ S T T+ A D + TG T +T+ I D NDN P+F + Y TI E I + Q+ TD D +NGRI ++ +S + +N +F L+ + R +L + F ++A+D G L S+ + + I ++ND +P V SI E K+L V +DAD N + + N I+ S + T ++D E E F + + D N+ T ++N DN P F +Y + EN+ + ++A KD NG ++Y I ++ F +DS G I + D E+++ Y V+A G LS+ +T+ + + D+NDNAPQFS S +D +G ++ A D D+ ++ +R+ + S+ A L+ ++ +G I+
Sbjct: 409 GFVLIDVTDVNDNSPAF--TSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGW---FQV--DFQSG---LVTTAKPLDREQVSSVTITITAQDHGSAPK-TGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQ-VNGLFELNTQTGVLWTKSQLDRETKSL--------YSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFA------SIMENEPPGKLLQ-VTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGV----------ISTLASLDHEVEEFFSL------IISAKDGGNKYAAKTAVVNVTVLNKA-DNLPVFLYEMYNFTVYENVPKGTLV--GRVYATTKDK--NGSISYAIVSGDPTN---LFLVDSTGGIIKINGDMDREEKAQYLLAVIAR-VGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDA-GKNGLVRYQLTSN----AEGLLWINSTSGVIK 901 HSP 6 Score: 93.9745 bits (232), Expect = 2.763e-19 Identity = 120/494 (24.29%), Postives = 207/494 (41.90%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRN-----TGKTEITIKIRDINDNAPKFERPIYIRTIKE-NVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMS---PEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNI-LMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFE----KESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQF 1871
+ +++ D ND+ +F + T + EN G + A LD++ Y L SS+ A + G + LDRE+ T + + I E N K + + + D+NDNAP F R +Y T+ E ++ P+F+I D DE +N + + + ++K F ++ S G++ LD E S+ + A D +L STA + I + + ND PE + N I E L ++ + SD D N L ++ N+ M + + + K TTQ + +T+ D+ IPL++ ++ + + DVNDN P F + EN+N F A+D+D N + + + + + + F ++S +I + D E + +V+ATDQG P +LS+ +I V++ D+NDN+P F
Sbjct: 1036 VTIYIQDSNDHRSLF-VNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLI-------SSESHFAVDVRSG--QITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSG--TGMDKFF----INSSTGELHLS----KTLDRETT-SSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVN---------ITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYE--------------LTITAQDH-GLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTG--FPVGRCTASDRDTGTNAHIAFSMY---SQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSP-KLSTRKSITVQVTDENDNSPGF 1478 HSP 7 Score: 89.7373 bits (221), Expect = 5.227e-18 Identity = 83/286 (29.02%), Postives = 130/286 (45.45%), Query Frame = 3
Query: 1371 LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGH-PNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPID-------REKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
L ++ +DRE + + V+ D N L + A I I + D ND P F ++ Y I E+ + +N ++A+DKD+ NG + Y I N + A F ++S G++ ++S DFE +Y + A D G P LSS+ + V + D NDNAP F V ENV G +G+ A+DRD+ + I F + S + SK +++ T +I T ID R+ + + +P L I + V D ND+ P F
Sbjct: 1216 LHLSKTLDRETTSSYNL------VVKATDASNA-NLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVIN--LNASDKDIGQNGLIKYSI---SNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIP--LSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDT-GTNAHIAFSMYSQT---PSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPK-----LSTRKSITVQVTDENDNSPGF 1478 HSP 8 Score: 78.1814 bits (191), Expect = 1.548e-14 Identity = 155/638 (24.29%), Postives = 253/638 (39.66%), Query Frame = 3
Query: 381 ILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLD-NATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPI-FQILVTDEDEDENG--RIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVN-----DMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGK-VTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEK--------------ESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKD 2216
I+ + N ++ + V V ++ DN PVF + + T+ EN P G + A D N + S + G+ ++ L G+ + I +DRE+ + Y +IA G + + + I++ D NDNAP+F I I +V + + D D +NG R L + G WIN S V R + + D Q + +++A D G ST T+ I L++N +S + V Q ++ F YV D DS N QL S+ P+ EE F I+ L +++ + + +IV D +P + + + I I D ND+ F N + + EN + + HA D H K + Y + S+ +F +D ++G+I D E+ E++Y+ + D+ + +IV + D NDNAP FS++ +A V E G + +I A D D E + +F S K ++ TG++ +DRE TS+ V++ + S +L A I ITV D ND P F D
Sbjct: 710 IISAKDGGNKYAAKTAVVNVTVLNKADNLPVF-LYEMYNFTVYENVPKGTLVGRVYATTKDKNGSISYAIVS-------GDPTNLFLVDS-TGGI--IKINGDMDREEKAQYLLAVIARVGTV-KPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWIN----------STSGVIKLARKLTDGDETQ----YTVQVLASDSGSPPQHSTMTIHIT-LSINHPPKFTLSSYVTHVLASQPLSYQF------------FYVVAVDQDSGKNGQLFYSI--PQGN---EEGLF----GIFPGGKLYIRKSLLQALKGSY----DLIVRAT----DGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALD---HSRTKDIVYSLI-----SSESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDK---------AIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDAD---EGDNAKFFYSLVSGTGMDKFF-INSSTGELHLSKTLDRETTSSYNLVVKATDASNA--NLYSTAKIEITVGDSNDQRPVFPESD 1268
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0]) HSP 1 Score: 184.496 bits (467), Expect = 3.905e-47 Identity = 189/662 (28.55%), Postives = 294/662 (44.41%), Query Frame = 3
Query: 267 DSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCC-----HILDFQISCNNEE------MQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIV-DPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEE---SRFRHPVNIYKQFSL-RTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
DS +N K+S I M +++ G I T I + ++ N ++ M + + + + DENDN P F I E+ P G R+ A D D +Y + + GNS F+L + G+ L + STLDRE YT + A D ++ I + + D+NDNAP+FE+ ++ I+E+ V + Q+ V D+DE NG I L + G + FT+D S G V ++ LDYE +++ + A+DGG S S+TA ++I I+NVND P FV Q SI E N + + +D+D TP ++E S F+ I + L + +DRE + ++V E N NA+I ++ DVNDN P F Y + EN+ + A + A D+D N KVTY + S F ++ G + + D E ++ YS V A D G P++ S+ + I + I D NDN+PQFSQS + V EN G I ++ A+D D+ + I+ + N +D TG+I +DRE ++ + +K+ + A + ITV D ND+ P F
Sbjct: 713 DSGANGKISYSILSGN---ENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTF--TGPSRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAI-ISGNQGNS--FQLDP--RSGI--LSVRSTLDRETIPSYTLVVKASDAGSPQQSI-TASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDN----FTID----STGFVLSKTP----LDYETT-AAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPS--FVSPAQVT----SIPEDVAINTHVVKLNATDSDG----------TPLTFDIVEGNAGSSFK----IDQSSGLISVAKRLDRETTANY----TLVVRATETGSQGESVYN-NATIRVL--DVNDNAPVFNPGSYAKSLHENLPIGQTV--AKVTATDRDEGENAKVTYELSVGDTSK----FEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQ-SAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGN----AFRIDSTTGRITVVGVVDREALASYNLTISAKDSG--VPPWVSTAFVAITVADENDNSPIF 1308 HSP 2 Score: 159.073 bits (401), Expect = 2.594e-39 Identity = 173/642 (26.95%), Postives = 278/642 (43.30%), Query Frame = 3
Query: 327 QMMLQLNKVCGSIHTCCHILD------------FQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIF-QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRT-TQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHK-DIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFR 2207
Q M ++ GSI T D Q + N + + V DENDN P FP+ + I EN P ++ + A D D+ T + +Y L F S + + + K G + + LD E YT + A DG ++T + I + D+NDNAP F +Y + E+V V I Q+ D D N R+ + + + FT+D Q +R D E S++ + AQDGG S S AT+ I+IL+VND P V + Q T S+DE + V SD D+ N T N H + + T ++++D E + + + VT + PL + + I +ND+NDNPP F+ + Y +++EN + A D+D NG + + I K + + + F ID G I ++S D+E ++ Y V A D+G P + ++ I I+D ND++P FS S+++ + E+ IG + + ATD DS P + + R I +D +G IR +DRE T + + VE+++ + I ++D+ND+ P F+
Sbjct: 9 QGMFTIDSSTGSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPL-NSYVFNIRENTPAA-QVAIVTATDRDSGTNAAITYSL---F----SGENKFMMNSKTG--EIRTVTPLDHETKDSYTMRISAFDG----KHTTFVPL-ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSY----FTVD--------SQGVIRTKGAFDRET-KASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRP----VFSSAQYTA--SVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNT--------NHAFTLDAVTGVVTVSRSLDFEQRSSYAL--GLSVTDR-----GSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTP-----AGTQVSATDRDSSTNGALVFGI--IKGNDDGV-FTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIF-IEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLI-----SGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTS--RSSSTRVTIALQDINDNSPIFQ 584 HSP 3 Score: 152.525 bits (384), Expect = 2.593e-37 Identity = 177/661 (26.78%), Postives = 294/661 (44.48%), Query Frame = 3
Query: 258 FILDSDSNL-KVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYC-TIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITST---LDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKM--HNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
F +D S L V+K++DRE ++++ + GS + NN IRV D NDN PVF Y ++ EN P+G + A D D + +Y+L +G++S FE+ P + +T LDRE + Y+ + A+D + ++ + IT+ I D+NDN+P+F + Y T+ EN I ++L +D D NGR+ + N G + +D + G++ + +D E L S+ I A+D G STA + I + + ND SP F N + IDEG +A V +D D N Q+ S I+ + S F +N L + I+RE + + T++ D + + + ++ + +++NDVNDNPP F Y G + EN + A A D D+ N + Y I + ++ F+I+S +G I + DFE++S Y V ATD ++ ++ + + +R+ + ND P F+Q ++ V EN + +++A+DRDS + S + S ++D +G I T +DRE S V ++ NP L + I + D ND+ P F
Sbjct: 1042 FKIDQSSGLISVAKRLDRETTANYTLVVRATE-TGSQGESVY--------NNAT-----IRVL--DVNDNAPVFN--PGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYEL----SVGDTSKFEVN-------PATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQ-SAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFR--------IDSTTGRITV----VGVVDREAL-ASYNLTISAKDSGVPPWVSTAFVAITVADENDNSP--IFASNETS----YGIDEGVSIGSRVAVVTATDRDEGSNAQVFYS------IVRGDTSAF--AINAMNGV-LTVKKEINRETVPTYTL------TIRASDRGSPM-MTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVA--ADDSDVGANAVLRYSI---ISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATD----SKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGS------LSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPP-----LSNLTWVTIKILDENDNSPKF 1617 HSP 4 Score: 150.599 bits (379), Expect = 1.061e-36 Identity = 175/657 (26.64%), Postives = 280/657 (42.62%), Query Frame = 3
Query: 258 FILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSS-DFELAKHFKDGVPYLI-ITSTLDREKTSMYTFTLIAIDGVEGNRN-TGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNIL--MIEESRFRHPVNI-YKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENIN-NHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
F +DS ++ DRE Q+ L+ + ++ +I D NDN PVF Q +++E+ +G + A D DN ++ L F GN++ F L D V ++ ++ +LD E+ S Y L D G+ T + + I + DINDN P F Y +KEN Q+ TD D NG + + + +FT +D S G + + DYE ++ + A+D G TA + I I +VND SP +QI E T+ + V +D DS PR L + + NI S+R + +DRE + ++Q + D +++ + I + D+NDN P F Q Y ++ E+ + H++ + A D D NG V Y + D N F I++ G I D+EK++ Y V A D G P+R SS + + V + D NDN PQF++S + V EN+ G + + ATD DS K I + + S ++N A +D TG+I TR P+DRE ++ + + + + S + + + I++ D ND+ PTF
Sbjct: 215 FTVDSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEIL----------------DVNDNRPVFSSAQYT-ASVDEDVAIGAAMVTVTASDKDNG----NNADLRYSFTSGNTNHAFTL-----DAVTGVVTVSRSLDFEQRSSYALGLSVTD--RGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT--QVSATDRDSSTNGALVFGIIKGNDDG---VFT---IDGSTGIISIA----KSPDYENKTR-YDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIP------ESTVIGSTVVTVTATDLDSG----------PRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSY--------SLQVEARDGGSTSRSSSTRVTIALQDINDNSPIF-QGPYVFRVSESSSPGHQI---GQVAATDADDSSNGDVRYALSD-----NTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSR-SSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGK-ISYSILSGNENMA---FAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVR--FMAATTVNISIADENDNQPTF 790 HSP 5 Score: 142.895 bits (359), Expect = 2.323e-34 Identity = 158/596 (26.51%), Postives = 278/596 (46.64%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCT-IEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKN---PSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ +F++D ND++PVF + Y I E+ +G + A DLD+ Y+L S + + A + + ++S LDRE T Y+ + A DG +R++ T +TI ++DINDN+P F+ P R + + I Q+ TD D+ NG + + ++ +F+++ S G + + + LDYE+ + + A+DGG S SS +++ + +VND P+ F ++ T G ++ G + YV +DADS N ++ S+L+ + RF + T +DRE + + T+ DD + + ++ I I D NDN P FT + E++ V + A D+D+ NG VTY I N N+ F++D ++G + + D E Y+ +V A+D G P + S +++I V + D NDNAP+F +S F+ + E+ + + Q+ D+D + S N T+D TG + ++ P+D E T+ V +++ PS+ A + IT+ ++ND+ P+F
Sbjct: 464 VTIFIEDVNDHSPVFS--PSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLI-------SGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSS-STRVTIALQDINDNSPIFQGPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDN-----TDVFSINT---STGLITLKTQ----LDYEKKTQ-YMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQ--FAKSLYTCTVGENLAAGVA----VCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEIT--------TRVPLDRETIASYSL------TINADD-GSLVRFMAATTVNISIADENDNQPTFTGPSRFNISEDSPTGTRV---GQLTATDRDIGPNGAVTYAIIS-GNQGNS--FQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQ-SITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDN-----FTIDS-TGFVLSKTPLDYETTAAYQLTVTARDGGSPSK-----SATAQVKITIINVNDNVPSF 997 HSP 6 Score: 135.576 bits (340), Expect = 4.599e-32 Identity = 164/593 (27.66%), Postives = 272/593 (45.87%), Query Frame = 3
Query: 444 VDDENDNNPVFPIVQTPYCT-IEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLI-ITSTLDREKTSMYTFTLIAID-GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKEN-VIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIF-IIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
V+D NDN PVF + Y + ++EN P G ++ A D D++T + + K + F + DG +I I + D E + Y T+ A D GV +T ++TI I D+ND++P F Y + I E+ VI + + TD D GR++ ++ SG + F +D SI R + LD E S+ ++ A+DGG S SS+ + I + ++ND SP + G + F + E + + V +DAD N ++ +L ++ I S +L+T +D E ++ + VT + D P ++ ++ ++++DVNDNPP+F +++Y + EN+ + A D D NGK++Y I + N M F +D G+I D E + YS + A D G R +++T+ + I D+NDN P F+ F + E+ G +GQ+ ATDRD P I+ + N LDP +G + R +DRE + T V++ + + A I ++V D+ND+ P F
Sbjct: 366 VNDINDNPPVFS--PSAYQSRVKENTPAGTQV---SATDRDSSTNGALVFGI---IKGNDDGVFTI-----DGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTA--QVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLI-SGN--VKGAFNIDANSGSI-------RVSSELDRETT-PSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSP----IFQGPYV---FRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDVFSINTST--------GLITLKT--QLDYEKKTQYM----VTVTAK----DGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAV--CYVTATDADSGANGKISYSI--LSGNEN-MAFAMDRFTGEITTRVPLDRETIASYSLTINA-DDGSLVRFMAATTVNISIADENDNQPTFTGPS-RFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNS----FQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSIT--ASIHVSVLDVNDNAPRF 894 HSP 7 Score: 133.265 bits (334), Expect = 2.700e-31 Identity = 161/602 (26.74%), Postives = 260/602 (43.19%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPY-CTIEENKPLGYRIPLPKAQDLDNA-----TFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNI--LMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNT-NASIFIIINDVNDNPPKFTQNVYYGQIEEN--INNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
++V VDD NDN P F ++ Y CT+ EN G + A D D+ ++S+ S + F + VP LDRE + Y+ T+ A DG R T + I I D NDN P F P +++ + Q+ TD D NG + + + Q F LD + VR+ LD E + S+ + A D G S TA++ + +L+VND +P RF ++ + G ++ ++ + +L V+V D D N L+ I+ + F + + +D E + ++ VT + D P + A + I I +VNDN P F I E+ IN H V +NA D D +T+ I + S+ F+ID +G I ++ D E + Y+ +V AT+ G S + +R+ D NDNAP F+ +A + EN+ IG + ++ ATDRD K + D+ ++P TG + T+ P+DRE ++ + V + + + + A I +T+ DLND+ P F
Sbjct: 671 VKVMVDDVNDNPPQF--AKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMD-----RFTGEITTRVP-------LDRETIASYSLTINADDG-SLVRFMAATTVNISIADENDNQPTFTGPSRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQ---GNSFQLDPRSGIL-----SVRS--TLDRETI-PSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAP--RFEKS---LFSGEIREDASVHSTVL-QVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTGF-----------VLSKTPLDYETTAAY----QLTVTAR----DGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNAT----DSD---GTPLTFDIVEGNAGSS---FKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQGE-SVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSK-----FEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAV--AAITLTINDLNDNSPQF 1203 HSP 8 Score: 129.028 bits (323), Expect = 4.431e-30 Identity = 142/516 (27.52%), Postives = 230/516 (44.57%), Query Frame = 3
Query: 687 LDREKTSMYTFTLIAIDGVEGNR-NTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTN-ASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSK 2225
DRE S Y T++A D NR + G+T + I ++D NDNAP+F Y+ I+EN + + TD D N I + SG+ NK +++ G ++R + LD+E S+ +I A DG + + ++ V+D++ F TG + E I+ + D D IN +L SL++ + S F + Q +RT DRE + ++ + Q D P + A++ I I DVNDN P F+ Y ++E++ + + A+DKD N + Y F + + F +D+ G + S+S DFE+ S Y+ + TD+G P L+ +S +++ + D NDN P FS S + V EN G Q++ATDRDS + I+K + + T+D TG I D E + V++++ R A + I + D+ND P F + SK
Sbjct: 28 FDRESESRYRLTVLAQDAA--NRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLF-SGE---NKF----MMNSKTG----EIRTVTPLDHET-KDSYTMRISAFDGKHTTF-------VPLITVDDVNDNAPFFALSVYKTGVY---EDVAVGSIVRQLTAVDLDVGINARLSYSLVSG------DTSYF----TVDSQGVIRTKGAFDRETKASY----QVALRAQ----DGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMV--TVTASDKDNGNNADLRYS---FTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSP-PLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT---QVSATDRDSSTNGALVFGIIKGNDDG----VFTIDGSTGIISIAKSPDYENKTRYDLTVQARD--RGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSK 485 HSP 9 Score: 129.028 bits (323), Expect = 4.907e-30 Identity = 169/622 (27.17%), Postives = 288/622 (46.30%), Query Frame = 3
Query: 417 MQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGN-RNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVI-VDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNI-DREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV---ESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQG 2264
+ + F+ + V DENDN+P+F +T Y I+E +G R+ + A D D S+ ++ G++S F + + +GV L + ++RE YT T+ A D G+ T E+T+ + D+NDN P F YI +++EN + + D D N + + + E K F I + LD+E+ + ++ A D + ++ + I+++N+ND++P F + Q T S+ E + ++ + V SD DS L S++ + + +F +I ++ + +T ++ DRE + I V+ D N PL+ + I I D NDN PKF + Y I EN + + + A D D N ++TY++ +N + F I + +G I +Q D E +S Y + A D G P + +SS TI V + D ND+ P + S V EN + +I A+D D+ + ++ F + S N + TLD TG I T+ P+DRE+ + T + + NPS L A ++I V D +D+ P F+ P++ + IS E+L +G
Sbjct: 1289 VSTAFVAITVADENDNSPIFASNETSYG-IDEGVSIGSRVAVVTATDRDEG----SNAQVFYSIVRGDTSAFAI--NAMNGV--LTVKKEINRETVPTYTLTIRASD--RGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDE---KRF-------KINSTSGVIMTTTPLDFEEKSQ-YGLEVTATD---SKYTAKTNVTIRVINLNDITPA--FTQ--QNYTA--SVRENSPTSTSVVKVSASDRDSF-GSLSYSIVGGK-----DSDKF----SIDQRSGIISTADVLDRELVSLYAIQ------VRVTDAGNP-PLSNLTWVTIKILDENDNSPKFDSSSYSSSILEN--SAPSSFSFKLAATDADEGTNARITYNLS--RNDA----FMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQ-ASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADT-GLNAELTFSLLS---NEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPS-----LSSVADVIIDVIDEDDNCPRFQ---PTEYNVTIS-ESLPRG 1840 HSP 10 Score: 104.76 bits (260), Expect = 1.211e-22 Identity = 126/520 (24.23%), Postives = 224/520 (43.08%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKL-----ELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKM---HNSGQEWINK----IFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRD 1955
+ V V+D NDN PVF Q+ ++ EN + A D D +V Y + E FK+ ++S GV ++ T+ LD E+ S Y + A D ++ T KT +TI++ ++ND P F + Y +++EN + V+ D D G + + +S + I++ I T D+LD+ +L + ++ D G LS+ + I+IL+ ND SP+ I E + + + +DAD N L+ + MI S + Q +DRE + + +Q D+ P ++ +I + + D+ND+ P + G + EN M I A+D D LN ++T+ + ++ S F +D+ G I D E++++Y+ + D+G+P+ LSS + +I+ + D++DN P+F + + + E++ G I Q+ A D D
Sbjct: 1398 LTVVVNDVNDNPPVFN-SQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTS----------GV--IMTTTPLDFEEKSQYGLEVTATD----SKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSV-VKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDR------------------ELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSIL------ENSAPSSFSFKLAATDADEGTNARITYNLSRNDAFMIGAS----------SGVITLAQPLDRENKSTYDL------AIQARDHGTP-PQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMR--ILASDADTGLNAELTFSLLSNEHKS---VFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPS-LSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASIVQVTARDID 1852
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Nematostella
Match: EDO34815 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN97]) HSP 1 Score: 150.984 bits (380), Expect = 3.113e-37 Identity = 171/621 (27.54%), Postives = 266/621 (42.83%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPY-CTIEENKPLGYRIPLPKAQDLDNA-----TFSVSSYKLELPF----KLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKEN----VIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLI---TLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQ---EAMIVITVRDLNDSPPTFRLKDPSKSQL 2234
+ + V D NDNNPVF T Y T+ EN P+G + A D D+ T+SV++ F K+ N E+A + LDRE Y T+ A DG T ++I D NDN PKF Y +I+EN V V I+ TD D + N + +++ S ++ G + +V +LD+E+ + + F ++A D S A + I +L+ ND +P RF+ + Q T I E + +A V +D DS +N + + E R +R + ++DREA ++++ V+ Y P ++ + + DVNDN PKFT+ + + E + V +NA A D D N +TY S + F I+S G + ++ D E + YSF V A D G L S+ + V I D+NDN+PQF + V + +G ++ +NA DRD V ++ + LI + P TG I T +DRE+ S T N S + + Q A++ I+V D ND+ P F + S + L
Sbjct: 100 VSIVVGDLNDNNPVFN--PTNYSTTVFENSPVGTSLLDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKVSNHGTIEVAGN-------------LDREVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIMATDRDIESNADVRYRLNGSDSIQF-------AVNPRTGVITTRVSPPPSLDHERTTN-YTFHVIAADQAGTGHESLAEVVIHVLDANDNTP--RFIPSSIQST----ISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGKFEIGR--------SDGVVRVSGSLDREAKAVYVLN----VSAIDGSYS---PREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNAT--ATDPDQGSNAAITY-------SMSYPGFAINSNTGSVTITRPLDRETKQAYSFTVHARDGGG---LESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRD-----------VGNNGHVTYAILILPFIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQPQFNQSEYSATVL 653 HSP 2 Score: 132.88 bits (333), Expect = 1.378e-31 Identity = 156/603 (25.87%), Postives = 259/603 (42.95%), Query Frame = 3
Query: 429 FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITS--TLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSID--EGTLSNKILAYVQVSDADSMINQ-LQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFI-----VVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+R+ D NDN P F + +I+EN G +P+ A + + S ++ ++L S + A + + GV ++ +LD E+T+ YTF +IA D G + E+ I + D NDN P+F TI E I + ++ D D NGRI + NSG E IG+ VR +LD E + + A DG + T+ + + +VND +P +F + F++D EG ++ +D D N + S+ P + S+ T+ +DRE + + TV D L +N ++ + I D NDN P+F Y + + + + A++A D+D+ NG VTY I + F I G I S D E++S+Y+ + + TD G + +S + + + + D NDN PQF+QS ++ V EN+ +G + + A D DS + + + D + +++P TGQIR + I+RE + V R L +A + + V D+ND+PP F
Sbjct: 210 LVRIL--DRNDNVPKFSHARYT-GSIQENSGPG--VPVQMASSIMATDRDIES-NADVRYRLNGSDSIQFAVNPRTGVITTRVSPPPSLDHERTTNYTFHVIAADQA-GTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSI-NSGSEG----------KFEIGRSDGVVRVSGSLDREA-KAVYVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTP--KFTKPA------FNVDVSEGVAVGSVIVNATATDPDQGSNAAITYSMSYPGFAINSNTG------------SVTITRPLDRETKQAYSF------TVHARDGGG---LESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVL--AVNAEDRDVGNNGHVTYAIL-------ILPFIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHG-VTQFTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTGGDG------VFSIEPSTGQIRLQKAINREAKE--NYHVTITASDRGTPVLSSDAKVHVHVLDVNDNPPVF 746 HSP 3 Score: 132.109 bits (331), Expect = 2.483e-31 Identity = 151/605 (24.96%), Postives = 260/605 (42.98%), Query Frame = 3
Query: 393 QISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENIN-NHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDE-NVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPP 2198
Q +E + I V D NDN P F I + TI E +G + A D D+ + ++ G+ FE+ + DGV + ++ +LDRE ++Y + AIDG R G +T+ ++D+NDN PKF +P + + E V V I TD D+ N I M G +I V LD E ++ F + A+DGG L S + ++I + ND SP+ V+ + ID + +LA V D D N + +++ ++ ++ T+ +DRE + + ++ + D+ + A + I + D NDN P+F Q+ Y + EN+ +V M + A D+D +N ++ Y + + F I+ G+I ++ + E + Y + A+D+G P LSS + + V + D NDN P F+ + + E N G + Q+NATD D + + + + + + A + T++ TG IRT+ ++RE T V +++ + + I + V D ND+ P
Sbjct: 309 QAGTGHESLAEVVIHVL--DANDNTPRF-IPSSIQSTISEAASIGQSVARVTANDPDSGL----NGRIFFSINSGSEGKFEIGR--SDGV--VRVSGSLDREAKAVYVLNVSAIDGSYSPRE-GYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITYSMSYPGF--------------AINSNTGSVTITRPLDRET-KQAYSFTVHARDGG--GLESNVAVNVEIGDENDNSPQFPTVQYQTDV-----IDRTPVGTIVLA-VNAEDRDVGNNGHVTYAILILPFIIVPDTG-----------NINTSSKLDREQQSLYTL-VHYVLNLSVTDH-GVTQFTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTM---VTARDEDSGINSQIMYSL-----TGGDGVFSIEPSTGQIRLQKAINREAKENYHVTITASDRGTP-VLSSDAKVHVHVLDVNDNPPVFTSRVYERTMSEGNAAAGEFVVQVNATDAD-VERNGHVTYTI----MHGALGMFTINETTGVIRTQGVLNRESKDFYTLIVMARDQGAV--PYMDFGTIDVHVIDKNDNTP 849 HSP 4 Score: 89.3521 bits (220), Expect = 4.910e-18 Identity = 85/280 (30.36%), Postives = 134/280 (47.86%), Query Frame = 3
Query: 1461 DNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRID--SQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIG---HLIGQINATDRDSLPEHKDIRF-IVKSDSQNRASKLITLDPLTGQIRTRY----PIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQ 2267
D+ +P + + I++ D+NDN P F Y + EN ++ + A D D N VTY + S+ ++ + S +G I + + D E Y+ + ATD G P ++ + +VRI D+NDN P+FS + + + EN G + I ATDRD + + D+R+ + SDS A ++P TG I TR +D E+T+ TF V + + + ++ + E +VI V D ND+ P F PS Q IS E GQ
Sbjct: 88 DHGLPSFSATTRVSIVVGDLNDNNPVFNPTNYSTTVFENSPVGTSLLD--VTATDADSGQNAYVTYSVT--AGDSHGLFRAVTKVSNHGTIEVAGNLDREVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIMATDRD-IESNADVRYRLNGSDSIQFA-----VNPRTGVITTRVSPPPSLDHERTTNYTFHVIAADQAGTGHESLAE--VVIHVLDANDNTPRFI---PSSIQSTIS-EAASIGQ 351
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Nematostella
Match: EDO48237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF4]) HSP 1 Score: 145.206 bits (365), Expect = 5.039e-35 Identity = 159/592 (26.86%), Postives = 265/592 (44.76%), Query Frame = 3
Query: 459 DNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITS-TLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKEN-VIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPS 2222
+N P F +Q ++ E+ +G + A D D+ + + Y + L +++ F + D + +I T LDRE + F + A DG E + G ++TI + D+NDN P FER IY I E+ I D + + +D D NG + + NS + N F SIG+V V + LD E++ ++ ++ AQD G S+T T++I +L+VND +P+ F + T I E N+++ V+ +D D N ++ +++ ++ +R V R Q +D E F ++VT Q D P L ++ I + DVNDN P+F + + I EN + F + A DKD NG++T+ N + F I+ G I + D EK ++F + A D+G P + ++ I + + D NDN P+FSQ + + EN G + Q+ A D DS P + + IV S +R + ++P G I ++ F V + + L A++ + V D N P F+ + S
Sbjct: 15 NNPPQFSRLQED-ASVSEDAEVGTVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYFSI-----DQITGVITTKRGLDREFLDRHFFRVKAEDGGEPSLE-GYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGD--NSAF-------SIGEVSGAVTVMKKLDREKV-PTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQ--FSKKVYSAT----IREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEV--------RVKQKLDYEMIGVF----NLLVTAQ----DKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYR--VQAYDKDHGTNGEITFSFMQ-----NDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFK-EGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNV-VYSIVSSSGHDRCFR---INP-QGLITLSCTLNYNTKHVYVFSVSASD-----GMLSSTALVYVNVTDSNTHAPEFKRRSYS 549 HSP 2 Score: 145.206 bits (365), Expect = 5.394e-35 Identity = 164/593 (27.66%), Postives = 264/593 (44.52%), Query Frame = 3
Query: 444 VDDENDNNPVFPIVQTPYCT-IEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIR--DINDNAPKFERPIYIRTIKENVIVDPIFQ-ILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTN-ASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
V D NDN P+F + Y I E+K +G + +A D D+ + E+ + + NS A + + + LDREK YT + A D +GN T +T+KI D+ND P+F + +Y TI+E+V V+ + + TD D+ NG + ++ + D+ SI ++ +VR LDYE + F + AQD G+ L + T+ I +++VND +P+ FV + Q I E + VQ D D N ++ S + I E+ + + +DRE F K D +P A I I + D+NDNPPKF+Q Y+ I EN + + A D D V Y I +S + FRI+ Q G I S + ++ + +Y F V A+D LSS++ + V + D N +AP+F + ++ V E+ +G + + ATDRD+ K I + + + ++D TG I+T +DREK T F V + + L ++ + I + D+ND+ P F
Sbjct: 118 VLDVNDNGPIFE--RNIYAADIPEDKSIGDFVLAVRASDADSGSNG------EVKYCILNSDGDNSAFSIGEVSGAVTVMKKLDREKVPTYTLQVQAQD--QGNPPRSAT-VTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGN----------DMNFFSINRINGEVRVKQKLDYEMI-GVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQ--FVSSHFQTM----IPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSINEN----------TGGISIKEELDREKVPKFTFGIKA--------RDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQ--VKAIDPDSGPT-NVVYSI--VSSSGHDRCFRINPQ-GLITLSCTLNYNTKHVYVFSVSASD----GMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAK-ISYSIATLVPE-----FSVDETTGVIKTAGSLDREKVDTYRFEVTATDHG--IPQLKAKSFVYIHIADVNDNDPVF 646 HSP 3 Score: 125.946 bits (315), Expect = 4.182e-29 Identity = 153/593 (25.80%), Postives = 256/593 (43.17%), Query Frame = 3
Query: 450 DENDNNPVFPIVQTPYCT-IEENKPLGYRIPLPKAQDLDNAT---FSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAID-GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
D NDN P F V + + T I EN +G +A D D+ T + S + +LPF + ++ G+ I LDREK +TF + A D GV G +ITI + DINDN PKF + Y +I EN + Q+ D D + + +SG + + F ++ Q + L+Y H + F + A DG LSSTA + + + + N +PE + ++ ++ +L +L V +D D+ N ++ S+ T ++ E + ++T ++DRE + + + VT D+ IP L + ++I I DVNDN P F + Y ++ E+I + + A+D D+ N ++ Y N F IDS G I + D E Y VVATDQG P +S ++ ++D D+ P F + + V E+ + + A +D PE + IV+ +S ++ ++P TG I+T +D E S V + + E +++ ++D+ND+ P
Sbjct: 331 DVNDNAPQF--VSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSINENTG---------GIS---IKEELDREKVPKFTFGIKARDKGVPFKE--GTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHD---RCFRIN--------PQGLITLSCTLNYNT-KHVYVFSVSASDG---MLSSTALVYVNVTDSNTHAPEFKRRSYSAEVK-----EDASLGTSVLT-VLATDRDTGSNAKISYSIAT-----LVPEFSVDETTGV-----IKTAGSLDREKVDTYRFE----VTAT----DHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIE--VSASDADIGKNAQIIYSFAS--NGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVI-LEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNS----PQVFDINPNTGAIQTLMKLDYETQSEYRLTVRA-----TLSPFFTETTVMVYLKDINDNTPVL 854 HSP 4 Score: 83.5741 bits (205), Expect = 3.793e-16 Identity = 127/559 (22.72%), Postives = 229/559 (40.97%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCT-IEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLI-ITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSP---------EIRF-VRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEH-----KDIRFIVKSDSQNRASKLITLDPLTGQI 2054
I + + D NDN P F Q Y T I EN G + KA D D+ +V + + +SS + + F+ LI ++ TL+ +Y F++ A DG+ + + + + D N +AP+F+R Y +KE+ + + +L TD D N +I I TL + + S+ + ++ +LD E++ ++ F++ A D G L + + + I I +VND P ++R +R G ++ + D N + Y S+ D + I+ + Q +RT + +DRE + + ++ T Q P + + +I+ DV D+PP F + +Y + E+ + + A +DL + Y I ++ F I+ G I D+E +S Y V AT + + +T++V +KD NDN P H V E G++ R +P + + F V + A + +TL+ +G++
Sbjct: 428 ITITLLDINDNPPKFS--QEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVV-------YSIVSSSGHD--RCFRINPQGLITLSCTLNYNTKHVYVFSVSASDGML----SSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYS-----------IATL-VPEFSVDETTGVIKTAGSLDREKV-DTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDG------------QGTFTIDST----------QGIIRTLKPLDRETIPEYEL--TVVATDQ-----GTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVIT--VKAKSQDLSPETGMMYSIV---RGNSPQVFDINPNTGAIQTLMKLDYETQSEYRLTVRAT----LSPFFTETTVMVYLKDINDNTPVLEAFHMNINVQE--------GKVPPEARYKIPAYDPDVSDKLTFKVM---EGNAKEWVTLNATSGEL 909 HSP 5 Score: 62.7734 bits (151), Expect = 8.263e-10 Identity = 91/412 (22.09%), Postives = 170/412 (41.26%), Query Frame = 3
Query: 324 PQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSN-FIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFK-DGVPYLIITS-TLDREKTSMYTFTLIAID-GVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIY----KQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPP 1532
PQ ++ L+ C + H+ F +S ++ + S + V V D N + P F ++ ++E+ LG + A D D + + SY + L F D +I T+ +LDREK Y F + A D G+ + K+ + I I D+NDN P F +P Y ++E++ + ++ +D D +N +I ++G FT+D Q +R + LD E + +E +VA D G ++ +++ + +V D P F + ++T + E T + V+ D L+P +M R P ++ +++T +D E + + + ++ P T ++ + + D+NDN P
Sbjct: 494 PQGLITLS--CTLNYNTKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFK-RRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIA-----------TLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLK--AKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDG--QGTFTID-------STQGIIRTLKPLDRETI-PEYELTVVATDQGTPPGQASVKVKVILEDVKDSPP--LFEKPLYEVT----VPEDTPPRSPVITVKAKSQD----------LSPETGMMYSIVRGNSP-QVFDINPNTGAIQTLMKLDYETQSEYRLTVRATLS----------PFFTETTVMVYLKDINDNTP 852
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Nematostella
Match: EDO46484 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQ20]) HSP 1 Score: 145.591 bits (366), Expect = 5.366e-35 Identity = 157/661 (23.75%), Postives = 291/661 (44.02%), Query Frame = 3
Query: 258 FILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTE---ITIKIRDINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNS-GQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNG--KVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKE-SIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRT----RYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
F ++++ +K + Q+D E+L P +L +T + +C+ + + ++D ND+ P F + + EN P+G + KA D D V +Y L+ SD A G L + DRE S+++ +IA D +GN +E + + + D ND+ P+F++ + ++ E+ + I +++ TD+D +N +++ + G+ W + T+ ++ G+VQ R LD+E S+ + A DG S+T + I I + ND+ P + ++ ++ ++ + ++V D+ +Q +L + I R + +Q +DREA F + V +A I I + D+NDN P+F ++Y G +EEN M H D D +L G ++ Y + D F+ID+ + + D E + ++ V+ATDQG N+LS++ + + D ND+AP F++ F V E+V G+++ ++ATD D+ P + ++ F+V ++ A +DP G + Y + + T+T S + +D A ++IT+ D ND+ P F
Sbjct: 2483 FSVETNGQIKTASQLDYEQLSPGDKTFKLQVRAQEENTNLYS-----TCS--------VAITLEDVNDDKPTFDLGNYD-ARVRENAPIGTTVITIKATDRDTGDAGVVTYFLKA------GSDEHFAIDVNSGT--LTTKKSFDREGQSLFSVIVIARD--KGNNPGALSEEVAVKVLVVDENDSPPQFDQAEFQTSVSESATIGTSILEVVATDQDIGDNAKLEYFISGGDGRFWF-AVQTISKSGRTYGEVQVDAR----LDFET-KSSYTIDVTATDG---RFSATTRVLITITDANDIVPMFMTLTTPTLLSPIYTGRVSEMTGSGVEVLKVYAVDTDSPNIQYTLEGSSSYFTIAA---RQEGGKFVGIISTGSQPLDREATPIFSFNVLAKDGVHTG----------SAYIEINVTDINDNQPRFPNSLYVGYVEENKAAGTSVMYVQAHD-DDDPYLGGNAEIRYTLTDNAGGK----FKIDANTALVTTEEILDRETSPNSFTITVLATDQGA-NKLSTTKVATIYVTDANDHAPVFTKRIFRGTVSEDVRPGYVVTSVSATDTDTGP-NAELEFVVTHGNEPAA---FYVDPSKGTVHVFDILNYTLRKSYNLTVTV---SDRGMPVLSDN-SPAYVLITITDANDNAPIF 3083 HSP 2 Score: 122.865 bits (307), Expect = 3.757e-28 Identity = 155/611 (25.37%), Postives = 259/611 (42.39%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGN----RNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVA------QDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFS------LRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGH-PNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNR-ASKLITLDPLT-GQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+RV V+ +N P F + TI+EN G I A D D YK+ +G F + + +I TS+LDRE + YT + A DG G R + ++++D+NDN P F Y+ +I+ I + + TD D +N +I + ++ +D + G ++ +V D + + +VA Q G N+ + I I D++P + D+ + +IL + V+ + L+ S P ++ S + +I ++FS ++T +D E P K+ V Q ++ + L + S+ I + DVND+ P F Y ++ EN + I A D+D G VTY F + + +F ID +G + +SFD E +S++S IV+A D+G+ P LS + V + D+ND+ PQF Q+ F V E+ IG I ++ ATD+D K FI D + A + I+ T G+++ +D E S+ T V + + ++IT+ D ND P F
Sbjct: 2206 VRVNVEYKNMYRPEF--TKCGKATIQENLLKGQLIATVTATDRDQGRNGEVEYKI---VPVGGQDFFTINNKTGE----VITTSSLDRETKATYTVIITAEDGGHGKDPAERLMSYCFLEVEVQDVNDNYPSFITRAYLGSIQNTKPIGTSVLTVSATDPDAGDNAKITYAFKSPNDKFE--------IDSTSGDIRTKVALTGTKDVNE-----KMTVVASNTEAIQGGDANNRDRETEVTIYI---TDLAPPV--------------CDKNLFTARILESLSVNS-----DVLKVSAQAPGGKSIVY-SPVKANADIDEKFSVETNGQIKTASQLDYEQLSPGDKTFKLQVRAQEENTN----LYSTCSVAITLEDVNDDKPTFDLGNYDARVRENAPIGTTVIT--IKATDRDTGDAGVVTY----FLKAGSDEHFAIDVNSGTLTTKKSFDREGQSLFSVIVIARDKGNNPGALSEEVAVKVLVVDENDSPPQFDQAEFQTSVSESATIGTSILEVVATDQDIGDNAKLEYFISGGDGRFWFAVQTISKSGRTYGEVQVDARLDFETKSSYTIDVTATD-----GRFSATTRVLITITDANDIVPMF 2756 HSP 3 Score: 100.523 bits (249), Expect = 2.837e-21 Identity = 149/614 (24.27%), Postives = 256/614 (41.69%), Query Frame = 3
Query: 432 IRVFVDDENDNNPVFPIVQTPYCT-IEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHF--KDGVPY--LIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDI-------------------LDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNI-DREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLS--SSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLT-GQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLND 2189
++V V DEND+ P F Q + T + E+ +G I A D D + KLE F G F A K G Y + + + LD E S YT + A DG R + T + I I D ND P F T+ ++ PI+ GR+ +M SG E + K++ +D Q GK + + + F F ++A+DG + +A + I + ++ND P R + G+ ++E + + YVQ D D L + + +F+ N +L TT+ I DRE + +S I + D N++ A+I++ D ND+ P FT+ ++ G + E++ ++ ++ A D D N ++ + + + + F +D G ++ ++ Y+ V +D+G P LS S + +++ I D NDNAP F + + V E++ +G + + A D DS K + I + + + D + G +RTR P+DRE T + +K+ L +A + +T+ D+ND
Sbjct: 2634 VKVLVVDENDSPPQFD--QAEFQTSVSESATIGTSILEVVATDQDIG----DNAKLEY-FISGGDGRFWFAVQTISKSGRTYGEVQVDARLDFETKSSYTIDVTATDG----RFSATTRVLITITDANDIVPMF------MTLTTPTLLSPIY-----------TGRVS-EMTGSGVEVL-KVYAVDTDSPNIQYTLEGSSSYFTIAARQEGGKFVGIISTGSQPLDREATPIFSFNVLAKDGVH---TGSAYIEINVTDINDNQP-----RFPNSLYVGY-VEENKAAGTSVMYVQAHDDDDPY--LGGNAEIRYTLTDNAGGKFKIDANT----ALVTTEEILDRETSP----NSFTITVLATDQGANKLSTTKVATIYV--TDANDHAPVFTKRIFRGTVSEDV--RPGYVVTSVSATDTDTGPNAELEFVV---THGNEPAAFYVDPSKGTVHVFDILNYTLRKSYNLTVTVSDRGMP-VLSDNSPAYVLITITDANDNAPIFIPNQYNKTVAEDLAVGSPVVVVTAVDYDSGDNAKFVFDITGGNPNDLFEVVPNPDNSSLGIVRTRLPLDRETTPIHHLEITAKDT----GGLTGKAHVWLTLLDVND 3186 HSP 4 Score: 78.1814 bits (191), Expect = 1.878e-14 Identity = 120/487 (24.64%), Postives = 214/487 (43.94%), Query Frame = 3
Query: 771 EITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQ-DGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSL--LTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDI--RFIVKSDSQNRASKLITLDPLTG--QIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
++ I + +D +F + Y +I EN ++ +F+ T I + E N +F++D +V + LD E+ S++ + GG +L++ + + +VND +P F R +Q F +D +N I+A ++ D+D N Q+ S+ P N + ++ P N+ L+TT + +ID +I TV+ D + P + ++ + + ++ PP F Q Y ++EN + ++ D + L F + + F IDS +G+I +Q D E Y+ + V G+ + ++V + D ND++P F++S + FF +E++ G IG++ ATDRDS H I RF+ SD Q+ LD TG + + +D E S FV +++ N L A + I +RD+ND+ P F
Sbjct: 983 DVFISVYPSSDTPVRFSQNPYSASIAENSPLNTEVFRATATKSGSSSG--IAYSLVGGQIENGNTMFSID--------SSGRVLLLRQLDRERT-KSYKLYVRGTYTGGSLTLATDVECLVTVTDVNDNTPLFTFDRVNKQ----FVVDNYAPANTIIATLRAVDSDEGANAQVTMSIQGTVPSNAPITIDT----PSNV-----LKTTTKLST------VIDYQI--TVRATDKGSP-PQYSETTVIVKVLNIQ-TPPVFGQAKYTVDVQENTKVGQQVISVKATYGDSNALLQ-------YSFVSGNLGDAFCIDS-SGQITVAQPLDREVLPSYT-LRVRVALGNNEDFTE---VVVSLTDINDDSPTFTKSVYEFFANEDISSGTSIGKVAATDRDS-GSHGQISYRFLYASDIQSMDK--FDLDQTTGIISLASGKSLDYEDISMHVLFVRAEDNGA--NKLSAIAEVRIYLRDINDNDPKF 1418 HSP 5 Score: 76.6406 bits (187), Expect = 5.349e-14 Identity = 135/600 (22.50%), Postives = 246/600 (41.00%), Query Frame = 3
Query: 444 VDDENDNNPVFPIVQTPYC-TIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKM-HNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNS-----LSSTATLRIQILNVNDMSPEIRFVRNGQQITGGF--SIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESI--YSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
++D NDN PVF + Y + + G I A+D D Y + S E + + GV L + L S Y+ + A D + N + + + N P+F + TI+EN++ I + TD D+ NG ++ K+ GQ++ +I +V ++LD E ++ I A+DGG L S L +++ +VND P IT + SI + V +D D+ N ++ + +P + I+ + +I + +L T+++ NE + + +Q D +N + + I I D+ PP +N++ +I E+++ + + + A GK + N+ F +++ NG+I + D+E+ S +F + Q L S+ ++ + ++D ND+ P F ++ V EN IG + I ATDRD+ + + + +K+ S +D +G + T+ DRE S + V +++ L +E + + V D NDSPP F
Sbjct: 2111 LEDTNDNAPVFK--RNDYLFRMTADASTGSMIGAVIARDQDQDDIEKVRYSV--------VSGTEFNVNTETGV--LTVAKDLSTGAKSEYSMEIRATDSTKSN----DARVRVNVEYKNMYRPEFTK-CGKATIQENLLKGQLIATVTATDRDQGRNGEVEYKIVPVGGQDFF-----------TINNKTGEVITTSSLDRET-KATYTVIITAEDGGHGKDPAERLMSYCFLEVEVQDVNDNYPSF--------ITRAYLGSIQNTKPIGTSVLTVSATDPDAGDNAKITYAFKSPNDKFEIDSTSG----DIRTKVALTGTKDV----NEKMTVVASNTEAIQGGDANNR---DRETEVTIYITDL--APPVCDKNLFTARILESLSVNSDVLKVSAQAP------GGKSIVYSPVKANADIDEKFSVET-NGQIKTASQLDYEQLSPGDKTFKLQVRAQEENTNLYSTCSVAITLEDVNDDKPTFDLGNYDARVRENAPIGTTVITIKATDRDT-GDAGVVTYFLKAGSDEH----FAIDVNSGTLTTKKSFDREGQSLFSVIVIARDKGNNPGALSEEVAVKVLVVDENDSPPQF 2648 HSP 6 Score: 76.6406 bits (187), Expect = 5.675e-14 Identity = 137/601 (22.80%), Postives = 252/601 (41.93%), Query Frame = 3
Query: 486 QTPY-CTIEENKPLG---YRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGK------TEITIKIRDINDNAPKFERPIYIRTIKENVI--VDPIFQILVT----DEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSID--EGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNG--KIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVE---SKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDP 2219
Q PY +I EN PL +R K+ +S+ ++E GN+ F + D +++ LDRE+T Y V G G E + + D+NDN P F + R K+ V+ P I+ T D DE N ++ + + G N T+D ++ K ++ + +DY+ + A D G S T+ +++LN+ +P + GQ +++D E T + + V+ + DS LQ S ++ I + Q +DRE + + ++ + +D+ + + + D+ND+ P FT++VY E+I++ + A D+D +G+++Y + + F +D G + + +S D+E S++ V A D G N+LS+ + + + ++D NDN P+FS + + + + + + Q+ ATD D+ + IR+ + + +Q A +++T + G IR + S+ +E S +P R + +Q + L D PP F L DP
Sbjct: 1000 QNPYSASIAENSPLNTEVFRATATKSGSSSGIAYSLVGGQIEN----GNTM-FSI-----DSSGRVLLLRQLDRERTKSYKLY------VRGTYTGGSLTLATDVECLVTVTDVNDNTPLF---TFDRVNKQFVVDNYAPANTIIATLRAVDSDEGANAQVTMSIQ--GTVPSNAPITIDT-PSNVLKTTTKLSTV--IDYQ-------ITVRATDKGSPPQYSETTVIVKVLNI--QTPPVF----GQ---AKYTVDVQENTKVGQQVISVKATYGDSNA-LLQYSFVS---------GNLGDAFCIDSSGQITVAQPLDREVLPSYTLRVRVALG-NNEDF---------TEVVVSLTDINDDSPTFTKSVYEFFANEDISSGTSI--GKVAATDRDSGSHGQISYRFLYASDIQSMDKFDLDQTTGIISLASGKSLDYEDISMHVLFVRAEDNGA-NKLSAIAEVRIYLRDINDNDPKFSAASYHAKLSLDAPVLEHVVQVTATDLDTANNGR-IRYSIVAGNQEGAFQVLTDN---GLIRVAKSLTTVAASSFLLTLEAADSGDPERKGSVNVQVNVF------LPDGPPKFVL-DP 1526 HSP 7 Score: 72.7886 bits (177), Expect = 8.965e-13 Identity = 156/670 (23.28%), Postives = 275/670 (41.04%), Query Frame = 3
Query: 264 LDSDSNLKVSKQIDREELCPPQMMLQLNKVC----GSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIV-QTPYC-TIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREK-TSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPL-----NTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI-----QDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGH----PNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRI----FNDLIQEAMIVITVRDLNDSPP 2198
LDS SN + Q+ E + P M+ L + + T + LD I + + N + VD E +P P+ ++ Y T+ E P +I D SVS +L GN+ + LAK D +++ S LD E+ S++ + A + + ++ + ++TI + + ND P F+ P+Y + E+ V +++T D + D ++ + T +DQ+ V A+ LDYE K++A D G ++ + + + + ND +P F RN G++ ++A Q D D + + R+ V +F++ T + L +K + T +Y EI + +A + + + N P+FT+ I+EN+ ++ A + A D+D NG+V Y I QDF F I+++ G++ + S D E ++ Y+ I+ A D GH RL S + V ++D NDN P F + + IG + ++ATD D+ ++ I + KS + +D +G IRT+ + K V + N I N+ +E + I + DL +PP
Sbjct: 1841 LDSGSNGLIGFQL--ENIPTPFMINPLTRQIEVGQPRLQTSRYGLDI-IPFDYGKPSVNGTKATVDIETVQSP--PVFNESSYTFTVSERAPTMTKIG-------DVTAVSVSGARLSYTIIEGNTGNKFLAKDNGD----IVLNSLLDFERDQSVFNLKVEAKEQIPKGLSS-EVDVTITVINANDFHPYFDDPVYRLKVPESRGVG---DVIMTVTARDCDCPSDCTCQVGQLKYSVEAGTSFDIDQTGAIVVAR-----TLDYETSKVQV-LKVMASDQGEKVFTAVTFVVVTLEDTNDNAP--VFKRNDYLFRMTADASTGSMIGAVIARDQ--DQDDI-------------------EKVRYSVVSGTEFNVNTETGV--------LTVAKDLSTGAKSEYSMEIRATDSTKSNDARVRVNVEYKNMYRPEFTK-CGKATIQENLLKGQLI--ATVTATDRDQGRNGEVEYKIVPVGGQDF--------FTINNKTGEVITTSSLDRETKATYTVIITAEDGGHGKDPAERLMSYCFLEVEVQDVNDNYPSFITRAYLGSIQNTKPIGTSVLTVSATDPDA-GDNAKITYAFKSPNDK-----FEIDSTSGDIRTKVALTGTKDVNEKMTVVASNTEAIQGGDANNRDRETEVTIYITDL--APP 2434 HSP 8 Score: 72.4034 bits (176), Expect = 1.135e-12 Identity = 146/661 (22.09%), Postives = 263/661 (39.79%), Query Frame = 3
Query: 258 FILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIIN--DVNDNPPKFTQNVYYGQIEENINN--HEVFMNAAIHAADKDLHLNGKVTYHIQ-DFKNSSNAMYFRIDSQNGKIYNSQSFDFEK-ESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQIN---ATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
F +DS + V++ +DRE L P L++ G NNE+ + V + D ND++P F + E+ G I A D D+ + SY+ + + F+L + G+ L +LD E SM+ + A D N+ + E+ I +RDINDN PKF Y + + +++ + Q+ TD D NGRI + QE ++ T D + +V + + SF + A D G + +++ + + D P +FV + + EG +N+ +A + + ++++ ++ ++ I S + TT+ +D E ++++ + D D +AS+ +IIN ++NDN P F GQI+ + F+ + A DKD + +V Y I + +N YF ID + I + D + S + F + A D G P ++ +++ ++V + + P V E G +I ++ T S+ + F + +D G + P+D E+ + V K S + I + ITV D+ND+ P F +
Sbjct: 1255 FCIDSSGQITVAQPLDREVL--PSYTLRVRVALG---------------NNEDFTE--VVVSLTDINDDSPTFTKSVYEFFA-NEDISSGTSIGKVAATDRDSGSHGQISYRFLYASDIQSMDKFDLDQ--TTGIISLASGKSLDYEDISMHVLFVRAEDN-GANKLSAIAEVRIYLRDINDNDPKFSAASYHAKLSLDAPVLEHVVQVTATDLDTANNGRIRYSIVAGNQEGAFQVLT----DNGLIRVAKSLTTV-------AASSFLLTLEAADSGDPERKGSVNVQVNVF-LPDGPP--KFVLDPVIVNA----TEGIAANQRVAVAKAATSEALKYEILSG--NTNDMFAINPS----------SGVILTTRELDYEEATGYIMN-----IIARDTRDR------SASVQVIINVVNINDNEPMFPGET-NGQIDRKVAGPFAPGFIATRLTAVDKD--IGDRVYYKISIEAEN-----YFTIDERGQLICKN---DLKGIASPFRFTIEARDGGLPQKVHTANVLLVFVNYRPKQQP------VRVIVPETTRAGTVITRVPRYFPTGEFSIVYPEKTNFTIDND---------------GNVTLNRPLDYEEIAFTLITVREKQASGPLENYID---VEITVLDVNDNAPFFTM 1816 HSP 9 Score: 67.0106 bits (162), Expect = 4.770e-11 Identity = 123/517 (23.79%), Postives = 206/517 (39.85%), Query Frame = 3
Query: 714 TFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENV-IVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFV-------RN-------GQQITGGFSIDEGTLSNKILAYVQVS--DADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNA--AIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFR 2207
T T+ A DG G + G T I I I+D N+N P FE+ Y TI E+ ++ I ++ D D NG I + N+ + FT+D + +R I LD+ Q ++ A+D R S A + +Q+ +D+S V RN G T SI E N + V+ + DA S QL+ SL N + S +L+T ++ +AN + ++ + + + N I ++ D N+N P F Q+E ++ + A D D +G+V Y I S F++ + G + + D EK S Y ++ A D+ + SS+ ++V+I+D +D+ PQF+Q + E + + D D L E + S + + K++ P +G I T PID + V + S + + + +SPP F+
Sbjct: 213 TLTVRANDG--GGLH-GTTRIQIDIQDTNNNPPVFEKSEYTVTIGEDTPVMTSILRVRARDADIGRNGGIYYYLRNT------QDFTID-------AITGVIRPIRMLDF-QSGQQRTLEVTARD--RGSSPKAANVNVQVTIRSDISGYPPVVVPSSSSDRNRPPVFPEGPSFT--LSIREDFPVNGAIQVVKANDLDAGSTNGQLRYSLSGNNNFAIDSTSGV---------VTLQT--QLEYKANPAQDVIDLVVTATDRNGLSGALSASVNLKIEVLDVDDNNNAPVFNPQ----QLELTVSEDTAVGRTIRRVSATDSDDGSDGQVVYSI---IQGSGLGVFQVQATTGDLIVAAPLDREKMSFYDLVIKAEDKATFPK-SSNLYVMVKIQDVDDHFPQFTQPMYYAKAPEKSPENTFVTVVKVVDHD-LGES-----VSYSITGACSFKIV---PTSGLILTTGPIDLTTEPSTYELVVTATSSNYGTTKRATGQVNVEITSKTESPPVFK 680 HSP 10 Score: 63.5438 bits (153), Expect = 4.894e-10 Identity = 118/512 (23.05%), Postives = 206/512 (40.23%), Query Frame = 3
Query: 468 PVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIR------DINDNAPKFERPIYIRTIKENVIVD-PIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAIN-----NLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGK-VTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQ-INATDRDSL 1961
PVFP + +I E+ P+ I + KA DLD S +L + L +++F + GV + + + L+ + + + + N +G ++ ++ D N+NAP F T+ E+ V I ++ TD D+ +G++ ++++ I +G Q Q + LD E++ ++ I A+D SS + ++I +V+D P+ Q E + N + V+V D D + + S+ + ++ S + TT ID EP + ++VT +Y + + I ++PP F Y + EN N AA + G+ V Y I+ S F IDS++G+ + QSFD+E Y + A PN ++SSS + + IKD+ D PQFSQS + V E + + + I D D+L
Sbjct: 359 PVFPEGPSFTLSIREDFPVNGAIQVVKANDLD-----AGSTNGQLRYSLSGNNNFAIDS--TSGV--VTLQTQLEYKANPAQDVIDLVVTATDRNGLSGALSASVNLKIEVLDVDDNNNAPVFNPQQLELTVSEDTAVGRTIRRVSATDSDDGSDGQV--------------VYSI-IQGSGLGVFQVQATTGDLIVAAPLDREKMSF-YDLVIKAEDKATFPKSSNLYVMVKIQDVDDHFPQF------TQPMYYAKAPEKSPENTFVTVVKVVDHD-LGESVSYSITGACSFKIVPTSGL-----------ILTTGPIDL-TTEPSTYE--LVVTATSSNYGTT--KRATGQVNVEITSKTESPPVFKNTPYAISVPEN---QGSIANLVCVAA---IDTKGQPVIYSIE-----SRGEPFGIDSKSGRFSSLQSFDYETADKYRIQISAQSGIAPNIMTSSSDVAITIKDEKD-PPQFSQSEYKVSVPEGASVRSTLSRGIRFVDEDTL 810 HSP 11 Score: 60.8474 bits (146), Expect = 3.930e-9 Identity = 135/599 (22.54%), Postives = 239/599 (39.90%), Query Frame = 3
Query: 528 YRIPLPKAQDLDNATFSVSSYKLELP----FKLGN-SSDFELAKHFK-DGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYI-RTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEW-IN---KIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN---QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIF--IIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNA-AIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQ-----GHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPL--------------TGQIRTRYPIDREKTSTI--TFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
YR+ +P+++ + + +V++ + P ++G E F D +++ TLD E + + ++A D E T T + + + D NDNAP F+R Y+ R + I ++ D+D+D+ ++ + SG E+ +N + T+ D S G + +I A D + S+ A +R+ + N PE F + G+ +I E L +++A V +D D N + + + ++ I K + TT ++DRE + +I+T + + + + F + + DVNDN P F Y G I+ N + + + A D D N K+TY FK+ ++ F IDS +G I + K+ VVA++ G N + + + I D AP D+N+ ++ +SL + D+ +K +Q K I P+ GQI+T +D E+ S TF ++ + N L + IT+ D+ND PTF L
Sbjct: 2020 YRLKVPESRGVGDVIMTVTARDCDCPSDCTCQVGQLKYSVEAGTSFDIDQTGAIVVARTLDYETSKVQVLKVMASDQGE-KVFTAVTFVVVTLEDTNDNAPVFKRNDYLFRMTADASTGSMIGAVIARDQDQDDIEKVRYSVV-SGTEFNVNTETGVLTV-AKDLSTGA----------------KSEYSMEIRATDSTK---SNDARVRVNVEYKNMYRPE--FTKCGKA-----TIQENLLKGQLIATVTATDRDQGRNGEVEYKIVPVGGQDFFTINN----------KTGEVITTSSLDRETKATY----TVIITAEDGGHGKDPAERLMSYCFLEVEVQDVNDNYPSFITRAYLGSIQ---NTKPIGTSVLTVSATDPDAGDNAKITYA---FKSPNDK--FEIDSTSGDIRTKVALTGTKDVNEKMTVVASNTEAIQGGDANNRDRETEVTIYITDL---APPV--------CDKNLFTARIL--------ESLSVNSDV---LKVSAQAPGGKSIVYSPVKANADIDEKFSVETNGQIKTASQLDYEQLSPGDKTFKLQVRAQEENTN-LYSTCSVAITLEDVNDDKPTFDL 2544 HSP 12 Score: 57.3806 bits (137), Expect = 3.491e-8 Identity = 89/413 (21.55%), Postives = 167/413 (40.44%), Query Frame = 3
Query: 1008 AQVRAINNLDYEQLYHSFEFKIVAQDG-GRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYK--------QFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQD----FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ ++ + DYE + +I AQ G N ++S++ + I I + D P+ + G S+ TLS I + D D++ QL+CS+ EE R P++ +F + T +D F D K+ D P + + + + D N P F++ ++ + + M I DKD+ G+VTY + D +S FR+D +GKI ++ ++Y A D G P L ++ + + + +D +FSQ+ ++ + EN + + + AT S I + + + + ++D +G++ +DRE+T + +V L + ++TV D+ND+ P F
Sbjct: 729 GRFSSLQSFDYETA-DKYRIQISAQSGIAPNIMTSSSDVAITIKDEKD-PPQFSQSEYKVSVPEGASV-RSTLSRGI----RFVDEDTLSTQLECSM---------EEMTSRIPLDYLSVVQDGGECKFVIEKT--LDTFVASKFTFDMKVT--------DKNFPGMFATTKVEVTVADTNTYTPVFSRTSFWASKPDTLPTDTSVMQLPI--IDKDMGSLGEVTYQLIDPTVSAGETSGYDRFRVD-DSGKIESTNIL--TANTLYKLQAKAKDGGSP-ALEATVDVFISVYPSSDTPVRFSQNPYSASIAENSPLNTEVFRATATKSGS---SSGIAYSLVGGQIENGNTMFSIDS-SGRVLLLRQLDRERTKSYKLYVRGTYTGGSLT-LATDVECLVTVTDVNDNTPLF 1104 HSP 13 Score: 55.0694 bits (131), Expect = 1.762e-7 Identity = 54/226 (23.89%), Postives = 101/226 (44.69%), Query Frame = 3
Query: 1596 MNAAIH---AADKDL-HLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEK---ESIYSFIVVATDQ-GHPNRLSSSSTIIVRI--KDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLND-----SPPTFRLKDPSKS 2228
+N AI A D D NG++ Y + N F IDS +G + +++ + + +V ATD+ G LS+S + + + D N+NAP F+ V E+ +G I +++ATD D + + + I+ Q + + TG + P+DREK S +++++ + +++ ++D++D + P + K P KS
Sbjct: 377 VNGAIQVVKANDLDAGSTNGQLRYSLSGNNN------FAIDSTSGVVTLQTQLEYKANPAQDVIDLVVTATDRNGLSGALSASVNLKIEVLDVDDNNNAPVFNPQQLELTVSEDTAVGRTIRRVSATDSDDGSDGQVVYSII----QGSGLGVFQVQATTGDLIVAAPLDREKMSFYDLVIKAEDKATFPKS--SNLYVMVKIQDVDDHFPQFTQPMYYAKAPEKS 590
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Medaka
Match: PCDH17 (protocadherin-17 [Source:NCBI gene;Acc:101168002]) HSP 1 Score: 221.476 bits (563), Expect = 7.800e-59 Identity = 205/638 (32.13%), Postives = 308/638 (48.28%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILV----TDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIP-LNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTY-----HIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP----QFSQSHFAFF-VDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFV 2108
L +D +S L +KQ IDRE LC + N C L ++ N++E+ I++ + D NDN+P FP I EN G R PL A DLD+ + +Y++ + + F L K DG P L++ LDRE S +T L AIDG E R +G +I +++ D NDN+P FE+ Y+ I EN+ P +IL+ TD+DE NG++ E I +F++D + + KVQ ++ D+E+ EF + A+D G N + + +++ + ND SP I FV Q +I E + ++A V+V+D DS N QLQC +L N+ FR N ++L T + +DRE + + + IV DN IP LN S + I D NDN P+FT+++Y Q+ EN E +I A D D+ NG VTY HI D S Y ++ NG IY S+SF++E+ + F V A D G P+ + S+ST+ V I D NDN P Q+ A V NV IG+++ + A D D H D + ++ L +DP+ G++RT + + E + V
Sbjct: 65 LVDVDPESGLIFTKQRIDRETLC------RRNPKCQ--------LSMEVFANDKEI--CMIKIDIQDINDNSPSFPSDHV-NIDISENAAAGTRFPLTIAHDLDSGENGIKTYQV----TRDDYNTFSLDLKVRGDGTIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPR-SGSMQINVRVTDSNDNSPVFEKSSYVIEIPENL---PPGKILIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSID-PNTGVIKVQGEI------DFEE-NPIIEFDVQAKDLGPNPIPGHCKITVKVQDKNDNSPVITFVSVRQG-----AISEAAPPDSVIALVRVTDKDSGRNGQLQCRVLG--NV------PFRLQENNDNFYTLLTDRPLDRETRDEYNV---TIVA-----RDNGIPSLNNTRSFTVKILDENDNAPRFTKSLYVLQVPENNIPGEYL--GSILAHDPDVGRNGTVTYSILPSHIGDV---SVYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGSPH-MESTSTVRVNILDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIVATVKAVDHD----HGDSGHLTYEITEGNDDHLFEIDPVGGEVRTAHALWEEIAPVVELVV 638 HSP 2 Score: 89.3521 bits (220), Expect = 1.495e-17 Identity = 127/495 (25.66%), Postives = 200/495 (40.40%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVT-DEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFT-QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYN---SQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS----------LPEH-KDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
I I I+DINDN+P F I EN F + + D D ENG +K + ++ N F+LD+ + G + ++ LD E H + A DGG S + + +++ + ND SP F ++ I I E KIL + +D D N T I++ P ++ ID E N D VQ D P+ + I + + D NDN P T +V G I E V A + DKD NG++ + + FR+ N Y + D E Y+ +VA D G P+ L+++ + V+I D+NDNAP+F++S + V EN G +G I A D D LP H D+ ++++P G I + E+T + F V++K+ + + + + + D+ND+ P L
Sbjct: 109 IKIDIQDINDNSPSFPSDHVNIDISENAAAGTRFPLTIAHDLDSGENG---IKTYQVTRDDYN-TFSLDLKVRGDGTIYPELVVQRPLDREDQSH-HTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSP--VFEKSSYVI----EIPENLPPGKILIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDP----NTGVIKVQGEIDFEENPIIEFD------VQAKDLGPN-PIPGHCKITVKVQDKNDNSPVITFVSVRQGAISEAAPPDSVI--ALVRVTDKDSGRNGQLQCRVL------GNVPFRLQENNDNFYTLLTDRPLDRETRDEYNVTIVARDNGIPS-LNNTRSFTVKILDENDNAPRFTKSLYVLQVPENNIPGEYLGSILAHDPDVGRNGTVTYSILPSHIGDVSVYT----------YVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGSPH--MESTSTVRVNILDVNDNLPVIIL 560 HSP 3 Score: 88.5817 bits (218), Expect = 2.230e-17 Identity = 91/309 (29.45%), Postives = 140/309 (45.31%), Query Frame = 3
Query: 1377 TTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHI--QDFKNSSNAMYFRIDSQNGKIYNS----QSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIP 2285
T Q IDRE + K ++++ D EI + I I I D+NDN P F + I EN F H D D NG TY + D+ S + R D G IY + D E +S ++ ++ A D G R S S I VR+ D NDN+P F +S + + EN+ G ++ +NATD+D + + + + R L ++DP TG I+ + ID E+ I F V++K+ N + I + V+D ND+ P +I+ +++QG I E+ P
Sbjct: 77 TKQRIDRETL--CRRNPKCQLSMEVFANDKEICM-----IKIDIQDINDNSPSFPSDHVNIDISENAAAGTRFPLTIAH--DLDSGENGIKTYQVTRDDYNTFSLDLKVRGD---GTIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPR-SGSMQINVRVTDSNDNSPVFEKSSYVIEIPENLPPGKILIDLNATDQDE-GSNGQVVYSFTGYASERIQDLFSIDPNTGVIKVQGEIDFEENPIIEFDVQAKDLGP--NPIPGHCKITVKVQDKNDNSP------------VITFVSVRQGAISEAAP 357
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Medaka
Match: ENSORLT00000041785.1 (protocadherin gamma-C5 [Source:NCBI gene;Acc:101169865]) HSP 1 Score: 217.624 bits (553), Expect = 9.719e-58 Identity = 193/647 (29.83%), Postives = 308/647 (47.60%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGV-----PYLIITSTLDREKTSMYTFTLIAIDGVEGNRN-TGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPI-FQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFK--NSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFF-------VDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITV 2174
L V+ +IDRE LC + + C +L Q+ + + +Q + V + D NDN+PVFP + I E+ G R PL A DLD SV SY L S D + + KD P L+++ TLDREK + T+ A+DG GN N +G ++I I + D NDN P FE+ +Y T+ EN I ++ D D+ NG ++ + + +F I K ++R I NLD+E S+E + A D G + ++ I++L+VND +P I S+ E S ++A + D DS N + +L P++ S F+ + ++L T++ +DRE S+ V + D + PL+ I + I DVNDNPP FTQ Y ++EN + ++ A+D D N K++Y I D K + S + Y ++S+NG IY+ SFD+EK ++ V A DQG P+ LSS++T+ V I DQNDNAP A + + + GHL+ ++ A D DS H +I ++ + L T+ TG++RT+ + + S+ +E K+ + +Q A + +++
Sbjct: 102 LLVNDRIDREALC------RQSASC--------VLTLQVVID-KPLQLFKVEVEIIDINDNSPVFPSSEK-NLQIAESTAAGTRFPLDTALDLDVGVNSVRSYTL--------SKDDYFSLNVKDMAGGRKNPELVLSKTLDREKMPTHQLTITAVDG--GNPNKSGISQINIYVLDNNDNFPVFEKNVYKVTLSENSEKSSIVLKLAAKDSDDGVNGEVEYSFGPQTPDAVLSVF-------GINKDSGEIRLIGNLDFETT-SSYEIDVSATDKGTPKMEGHCSVHIEVLDVNDNAPYIFLTSQPN------SVPENAPSGTVVALISARDLDSGDNG-KVTLQVPKS------SPFKLKASFSDNYALITSRALDRETF------SEYSVEITATDLGSP-PLSNKKMISVTITDVNDNPPVFTQRSYNVYLKENGVPGSILF--SVSASDLDSSENAKISYSILDSKVQDVSVSSYVYMNSENGSIYSMHSFDYEKLKVFEIHVQAKDQGSPS-LSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDADS--GHN--AWISYRLAEATDASLFTVSLYTGEVRTKRAVSEQDDSSQRLILEIKDD----GEPLQSATVTVSI 683 HSP 2 Score: 75.8702 bits (185), Expect = 2.006e-13 Identity = 76/245 (31.02%), Postives = 110/245 (44.90%), Query Frame = 3
Query: 1494 IFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDS-------LPEHKDIRFIVKSD-SQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
I I + D NDN P F +NVY + EN + + A A D D +NG+V Y + F I+ +G+I + DFE S Y V ATD+G P ++ ++ + + D NDNAP + V EN G ++ I+A D DS L K F +K+ S N A LIT L + + Y ++ IT P L + MI +T+ D+ND+PP F
Sbjct: 246 INIYVLDNNDNFPVFEKNVYKVTLSENSEKSSIVLKLA--AKDSDDGVNGEVEYSFGPQTPDAVLSVFGINKDSGEIRLIGNLDFETTSSYEIDVSATDKGTP-KMEGHCSVHIEVLDVNDNAPYIFLTSQPNSVPENAPSGTVVALISARDLDSGDNGKVTLQVPKSSPFKLKASFSDNYA--LITSRALDRETFSEYSVE------ITATDLGSPP------LSNKKMISVTITDVNDNPPVF 473
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Medaka
Match: ENSORLT00000042182.1 (protocadherin gamma-C5 [Source:NCBI gene;Acc:101169865]) HSP 1 Score: 214.157 bits (544), Expect = 2.137e-56 Identity = 188/645 (29.15%), Postives = 301/645 (46.67%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDG---VPYLIITSTLDREKTSMYTFTLIAIDGVEGNR-NTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIF-QILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFK--NSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFF-------VDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITV 2174
L V+ +IDRE LC G +C +L QI N +Q + I V + D NDN+PVF + + + I E+ G R PL A+DLD + SV Y L + F L G VP L++ LDREK S++ LIA DG GN TG +IT+ + DINDN P F+ P Y T+ EN +V + ++ TD D+ NG I+ + + +F I + + + + LDYE+ +E +I A+D G + ++I ++++ND PEI + E + ++A + D DS N + + S F + ++L T +DRE + ++ I + PL++ I + + DVNDNPP FTQ Y ++EN + ++ A+D D N K++Y I D K + S + Y ++S+NG IY+ SFD+EK ++ V A DQG P+ LSS++T+ V I DQNDNAP A + + + GHL+ ++ A D DS H +I ++ + L T+ TG++RT+ + + S+ +E K+ + +Q A + +++
Sbjct: 167 LLVNDRIDREALC------------GQSASC--VLPLQIVTENP-LQLHRIEVEIKDINDNSPVF-LTEERFLKIAESTATGVRFPLDPAEDLDVGSNSVKIYTLS------KNECFSLKMKELSGDRQVPELVLDKPLDREKQSVHHLLLIASDG--GNPVKTGTAKITVSVMDINDNVPVFKMPFYNVTVPENGVVGSVLLRVEATDADDGVNGEIEYVFAEHTPQSLQSVF-------KINQEKGDISLLEPLDYEK-GAIYEIRITARDKGVPQMEGHCRVQIMVMDINDNVPEIVITSKPN------PVQEDSPKGTVVALINARDQDSGNN-------GKVKLKITNGSPFALKPSFSNNYALITNGALDRETFSEYNVEITAIDS-------GSPPLSSVKMITVSVTDVNDNPPVFTQRSYNVYLKENGVPGSILF--SVSASDLDSGENSKISYSILDSKVQDVSVSSYVYMNSENGSIYSMHSFDYEKLKVFEIHVQAKDQGSPS-LSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDADS--GHN--AWISYRLAEATDASLFTVSLYTGEVRTKRAVSEQDDSSQRLILEIKDD----GEPLQSATVTVSI 748 HSP 2 Score: 75.0998 bits (183), Expect = 3.312e-13 Identity = 72/256 (28.12%), Postives = 115/256 (44.92%), Query Frame = 3
Query: 1461 DNEIPLNTN-ASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHK-------DIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
D P+ T A I + + D+NDN P F Y + EN V + + A D D +NG++ Y + S F+I+ + G I + D+EK +IY + A D+G P ++ + + + D NDN P+ + V E+ G ++ INA D+DS K F +K N + LIT L + + Y ++ IT ++S +P L MI ++V D+ND+PP F
Sbjct: 299 DGGNPVKTGTAKITVSVMDINDNVPVFKMPFYNVTVPENGVVGSVLLR--VEATDADDGVNGEIEYVFAEHTPQSLQSVFKINQEKGDISLLEPLDYEKGAIYEIRITARDKGVP-QMEGHCRVQIMVMDINDNVPEIVITSKPNPVQEDSPKGTVVALINARDQDSGNNGKVKLKITNGSPFALKPSFSNNYA-LITNGALDRETFSEYNVE------ITA-IDSGSPP-----LSSVKMITVSVTDVNDNPPVF 538
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Medaka
Match: pcdh17 (protocadherin 17 [Source:NCBI gene;Acc:101155999]) HSP 1 Score: 213.386 bits (542), Expect = 3.602e-56 Identity = 198/623 (31.78%), Postives = 298/623 (47.83%), Query Frame = 3
Query: 255 LFILDSDSNLKVSKQ-IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL----AKHFKDGV--PYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQIL-VTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRF--VRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMIN-QLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEI-PLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAM--YFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAP----QFSQSHFA-FFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRY 2066
L +D S L +KQ IDRE LC + N C L ++ N++E+ I++ + D NDN+PVFP Q I EN G R PL A D D + +Y++ D+ L K DG P L+I LDRE+ S +T L A DG E R +G +I +K+ D NDN+P F+ P Y+ I EN + L TD DE NG+I E I ++F++D I K+Q ++ DYE+ E + A+D G N + + +++L+ ND P I F VR G +I E ++A V+V+D DS N QLQC +L N+ F+ N +++ T + +DRE + + + IV DN I PLN+ S + I D NDN P+FT++VY QI EN E ++ A D DL NG V Y I + S + Y +++ NG IY +SF++E+ + F V+A D G P+ L S++T+ + ++D NDN P Q+ A V NV +G+++ + A D D + + + S L +DP+TG++RT +
Sbjct: 70 LIDVDPQSGLLYTKQRIDRETLC------KRNPKCQ--------LSMEVFANDKEI--CMIKIDIQDINDNSPVFPSDQI-DIDISENAVPGTRFPLTSAHDPDAGENGLKTYQI-------TRDDYNLFSLEVKSRGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPR-SGTMQINVKVIDSNDNSPVFDPPSYVVEIPENSTPGKVLIDLNATDPDEGNNGQIVYSFSGYAPERIRELFSIDSRTGVI-KIQGEI------DYEE-SPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQG-------AISEAAPPGTVIALVRVTDKDSGRNGQLQCRVLG--NV------PFKLEENYDNFYTVVTERPLDREMQDEYNV---TIVA-----KDNGIPPLNSTKSFTVKILDENDNVPRFTKSVYILQISENNIPGEYL--GSVLAHDPDLGQNGTVYYSIVNSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLAKDAGSPH-LESNATVRISVQDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGYIVTTVRAVDND----YGESGRLTYEISDGNEEHLFEIDPVTGEVRTAH 629 HSP 2 Score: 86.6557 bits (213), Expect = 9.357e-17 Identity = 126/491 (25.66%), Postives = 208/491 (42.36%), Query Frame = 3
Query: 774 ITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVT-DEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSP---EIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKII-VTVQCDDYD-NEIPLNTNASIFIIINDVNDNPPKFT-QNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQD---FKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRF-IVKSD-SQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRL 2210
I I I+DINDN+P F I EN + F + D D ENG LK + ++ N +F+L++ + G ++ LD E+ H + A DGG S T + +++++ ND SP +V I E + K+L + +D D N ++ P I + FS+ + + + E +S +I + VQ D N IP + ++ ++ D NDN P +V G I E V A + DKD NG++ + FK N F + + D E + Y+ +VA D G P L+S+ + V+I D+NDN P+F++S + + EN G +G + A D D L ++ + + IV S+ S + + ++ G I + E+ F V +K+ L A + I+V+D+ND+ P L
Sbjct: 114 IKIDIQDINDNSPVFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENG---LKTYQITRDDYN-LFSLEVKSRGDGTKFPELVIQRPLDREERSH-HTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFDPPSYV---------VEIPENSTPGKVLIDLNATDPDEG-----------NNGQIVYSFSGYAPERIRELFSIDSRTGVIKIQGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVL--DRNDNWPSIGFVSVRQGAISEAAPPGTVI--ALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYT------VVTERPLDREMQDEYNVTIVAKDNGIP-PLNSTKSFTVKILDENDNVPRFTKSVYILQISENNIPGEYLGSVLAHDPD-LGQNGTVYYSIVNSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLAKDAGSPH--LESNATVRISVQDVNDNIPVIVL 565
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Medaka
Match: ENSORLT00000037422.1 (pep primary_assembly:ASM223467v1:10:14795752:14799434:-1 gene:ENSORLG00000025685.1 transcript:ENSORLT00000037422.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 208.764 bits (530), Expect = 3.213e-55 Identity = 187/645 (28.99%), Postives = 304/645 (47.13%), Query Frame = 3
Query: 282 LKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDG--VPYLIITSTLDREKTSMYTFTLIAIDGVEGNR-NTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDP-IFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFK--NSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFF-------VDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITV 2174
L V+ +IDRE LC G +C +L QI N +Q + + V + D NDN P F + I E++ G R PL A+D D + + +Y L F L K ++G +P L++T +LDREK ++++ L A+DG GN +G ++ITI + DINDN P+FE Y +KEN+ + D DE NG I+ + + ++F +D + LD+E S+ I A+D G + T+++ +++VND +PEI S+ E + S ++A + V D DS + +++ S F + ++L T +DRE+ + D I VT + PL + +I + I DVNDNPP FTQ Y ++EN + ++ A+D D N K++Y I D K + S + Y ++S+NG IY+ SFD+EK ++ V A DQG P+ LSS++T+ V I DQNDNAP A + + + GHL+ ++ A D DS H + I ++ + L T+ TG++RT+ + + S+ +E K+ + +Q A + +++
Sbjct: 82 LVVNDRIDREALC------------GQSASC--LLPLQIVIENP-LQLHRMEVEIKDVNDNAPTF-LKSDHVIEIAESRVAGVRFPLEMAEDPDVGSNGLKTYTLS------KDECFTLKVKEIENGRKIPELVLTKSLDREKKAVHSLFLTAVDG--GNPVKSGTSKITINVLDINDNVPQFENAFYKVDVKENIANGSFVISTRAADVDEGPNGEIEYSLGVHTHPSVLELFYVD-------AASGDIYLKRQLDHET-QSSYRIDISAKDKGFPKMEGHCTVQVDVIDVNDNAPEIILTSKST------SVPEDSSSGTVVALLSVRDLDS-------GDYGKVTLQLLKTSSFALKPSFSNNYALITNGPLDRES----ISDYSIEVTAK---DSGTPPLLSTKTIPVSITDVNDNPPVFTQRSYNVYLKENGVPGSILF--SVSASDLDSGENAKISYSILDSKVQDVSVSSYVYMNSENGSIYSMHSFDYEKLKVFEIHVQAKDQGSPS-LSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDADS--GHNAL--ISYRLAEATDASLFTVSLYTGEVRTKRAVSEQDDSSQRLILEIKDD----GEPLQSATVTVSI 663 HSP 2 Score: 89.3521 bits (220), Expect = 1.247e-17 Identity = 94/366 (25.68%), Postives = 161/366 (43.99%), Query Frame = 3
Query: 1119 LRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNAS-IFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTG---QIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTF 2204
+ ++I +VND +P F+++ I I E ++ D D N L+ L+ + + + N K L T+++DRE K + ++ D P+ + S I I + D+NDN P+F Y ++ENI N ++ AAD D NG++ Y + + S F +D+ +G IY + D E +S Y + A D+G P ++ T+ V + D NDNAP+ + + V E+ G ++ ++ D DS K ++K+ S L P + T P+DRE S + V +K+ L+ I +++ D+ND+PP F
Sbjct: 117 MEVEIKDVNDNAPT--FLKSDHVI----EIAESRVAGVRFPLEMAEDPDVGSNGLKTYTLSKDECFTL---KVKEIENGRKIPELVLTKSLDRE--------KKAVHSLFLTAVDGGNPVKSGTSKITINVLDINDNVPQFENAFYKVDVKENIANGSFVIST--RAADVDEGPNGEIEYSLGVHTHPSVLELFYVDAASGDIYLKRQLDHETQSSYRIDISAKDKGFP-KMEGHCTVQVDVIDVNDNAPEIILTSKSTSVPEDSSSGTVVALLSVRDLDSGDYGKVTLQLLKTSS-------FALKPSFSNNYALITNGPLDRESISDYSIEVTAKDSGT--PPLLSTKTIPVSITDVNDNPPVF 453
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Planmine SMEST
Match: SMESG000053174.1 (SMESG000053174.1) HSP 1 Score: 2029.22 bits (5256), Expect = 0.000e+0 Identity = 1052/1052 (100.00%), Postives = 1052/1052 (100.00%), Query Frame = 3
Query: 51 MKIISTLLFSLIIAYTKCQFIHEFHITENSKIYKTIFNXXXXXXXXXXXXXXXXXXXXXFMSTVINNGLFILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIPFXXXXXXXXXXXXXXXXXRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPNVATQSKNQPPSSRNQKPEQAKDEIRQITMIIILASLAGLFXXXXXXXXXXXXRKCDRLNINNDGSGSDKNNQYDSQAMLDRNCIIQKNDLEASSFADIMTTSPMNFYNGLQVIPSNKSLHSTTNFKYPVEMEFTSKDDYLPPPYTKYHLIDKSDETYQILKSNPKQMETYDSIIRAIPIKASSQANQMTNNETFPNSKPSLTSQINLVTISDKPTHSTIRSNQTSFV 3206
MKIISTLLFSLIIAYTKCQFIHEFHITENSKIYKTIFNLKTLLISKSKIDSSKAKDCKIFMSTVINNGLFILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIPFEVEDADDNNNVNPCCVVRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPNVATQSKNQPPSSRNQKPEQAKDEIRQITMIIILASLAGLFIIVILMVLIITIRKCDRLNINNDGSGSDKNNQYDSQAMLDRNCIIQKNDLEASSFADIMTTSPMNFYNGLQVIPSNKSLHSTTNFKYPVEMEFTSKDDYLPPPYTKYHLIDKSDETYQILKSNPKQMETYDSIIRAIPIKASSQANQMTNNETFPNSKPSLTSQINLVTISDKPTHSTIRSNQTSFV
Sbjct: 1 MKIISTLLFSLIIAYTKCQFIHEFHITENSKIYKTIFNLKTLLISKSKIDSSKAKDCKIFMSTVINNGLFILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIPFEVEDADDNNNVNPCCVVRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPNVATQSKNQPPSSRNQKPEQAKDEIRQITMIIILASLAGLFIIVILMVLIITIRKCDRLNINNDGSGSDKNNQYDSQAMLDRNCIIQKNDLEASSFADIMTTSPMNFYNGLQVIPSNKSLHSTTNFKYPVEMEFTSKDDYLPPPYTKYHLIDKSDETYQILKSNPKQMETYDSIIRAIPIKASSQANQMTNNETFPNSKPSLTSQINLVTISDKPTHSTIRSNQTSFV 1052
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Planmine SMEST
Match: SMESG000053174.1 (SMESG000053174.1) HSP 1 Score: 1956.8 bits (5068), Expect = 0.000e+0 Identity = 992/992 (100.00%), Postives = 992/992 (100.00%), Query Frame = 3
Query: 231 MSTVINNGLFILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIPFXXXXXXXXXXXXXXXXXRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPNVATQSKNQPPSSRNQKPEQAKDEIRQITMIIILASLAGLFXXXXXXXXXXXXRKCDRLNINNDGSGSDKNNQYDSQAMLDRNCIIQKNDLEASSFADIMTTSPMNFYNGLQVIPSNKSLHSTTNFKYPVEMEFTSKDDYLPPPYTKYHLIDKSDETYQILKSNPKQMETYDSIIRAIPIKASSQANQMTNNETFPNSKPSLTSQINLVTISDKPTHSTIRSNQTSFV 3206
MSTVINNGLFILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIPFEVEDADDNNNVNPCCVVRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPNVATQSKNQPPSSRNQKPEQAKDEIRQITMIIILASLAGLFIIVILMVLIITIRKCDRLNINNDGSGSDKNNQYDSQAMLDRNCIIQKNDLEASSFADIMTTSPMNFYNGLQVIPSNKSLHSTTNFKYPVEMEFTSKDDYLPPPYTKYHLIDKSDETYQILKSNPKQMETYDSIIRAIPIKASSQANQMTNNETFPNSKPSLTSQINLVTISDKPTHSTIRSNQTSFV
Sbjct: 1 MSTVINNGLFILDSDSNLKVSKQIDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIPFEVEDADDNNNVNPCCVVRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGNDSIETEITFKILFINDPNVATQSKNQPPSSRNQKPEQAKDEIRQITMIIILASLAGLFIIVILMVLIITIRKCDRLNINNDGSGSDKNNQYDSQAMLDRNCIIQKNDLEASSFADIMTTSPMNFYNGLQVIPSNKSLHSTTNFKYPVEMEFTSKDDYLPPPYTKYHLIDKSDETYQILKSNPKQMETYDSIIRAIPIKASSQANQMTNNETFPNSKPSLTSQINLVTISDKPTHSTIRSNQTSFV 992
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Planmine SMEST
Match: SMESG000042045.1 (SMESG000042045.1) HSP 1 Score: 412.535 bits (1059), Expect = 1.646e-126 Identity = 275/790 (34.81%), Postives = 435/790 (55.06%), Query Frame = 3
Query: 273 DSNLKVSKQIDREELCPPQMML------------QLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGV-EGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSG---QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFND--LIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIPFXXXXXXXXX-XXXXXXXXRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHG--NDSIETEITFKILF---INDPNVATQSKNQPPSSRNQ 2570
D+ L V IDRE +CP + L Q + CC + FQ+ + ++ S +I + V DENDN+P F PY T+ EN + I LP A DLD+ F + YK+ PF +GN S F L G P L++ S LDRE S Y F L A+D + +R+ E+ IK+ DINDN P F++ Y I E+ + + VTD DE +N ++ + + ++ I + F +D S + +R I+ +DYE + + F ++A D G LSSTA + I ++N ND +P I+ +R G+ ++ ++ E + I+A +QVSD DS++ ++CSL I HP+ YK+F + T + +DRE ++ + + + + C D D PL TN +I I + D+NDNPP FT++ Y G++ ENI V M I DKD N VTY I KNS++ YF ID+ +GKI + QS D+EK ++SF ++A D+ N LSS++ IIV + D NDNAP F + H++F V ENV + IGQI TD D+ PE+K +++ KS + N ++I +D +G+++T PIDREK +IT + ++N + N + E M++IT+ D+ND+PP F L +P+KS LI ++ + + C+ IP+ V DAD + N + CC+++L ++ NG+L L +T N +C+ V+L A+D N S++ +++F I ++D + +S N+ +++NQ
Sbjct: 51 DNRLSVVSNIDRESICPIKNSLNDYDQSAETYNSQQSSHSCKYDECCTVFSFQVD-SGIKISSFYILIKVLDENDNSPKFLPFLNPYQTLPENSQINTVILLPSAIDLDSEAFGIKYYKISKPFLIGNDSHFTLLDKIASGRPQLLLISPLDREVISEYRFILKAVDRENDDHRDISGVEVEIKVGDINDNPPVFDKTFYTANIVEHSKLVNVISFYVTDLDEGQNKQVSITIETENDYKKDQIKRFFQIDF---SPSLMTGSIRLIDEIDYETNPYKYSFNLIATDNGLPRLSSTAKVNIILINKNDQAPVIKVIRKGEIVSRSITMFENEPARTIVASLQVSDRDSLVTDIECSLDDYHLNFEITAINEIHPLGHYKEFIINTLKPLDREDDK----NQYLKINIYCSDQDKLTPLTTNLTIHINLFDINDNPPVFTRSKYQGELIENIPQAPVKMIEPILTLDKDHGKNAYVTYKIDSSKNSTDWEYFTIDADSGKISSRQSIDYEKNKLFSFNIIAIDKDQSN-LSSTALIIVHVIDANDNAPIFPKPHYSFTVRENVPVNTEIGQIETTDLDTRPENKIVKYFHKSYTNNY--QVIHVDQNSGKLKTIGPIDREKVRSITILITARNEASYQNKNLMDSECMVIITIEDVNDNPPIFSLINPAKSSLIFTINKGFRHENCQMIPYAVSDADHDEPNSDSCCILQLDNDQNGMLYLLSNTPNFLCLQNTMNTPGIYRVSLTATDNKNNPNKSLKAKVSFNIDVRHEVSDNPFSEKSDNKVHTTKNQ 829
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Planmine SMEST
Match: SMESG000042045.1 (SMESG000042045.1) HSP 1 Score: 412.535 bits (1059), Expect = 2.538e-126 Identity = 275/790 (34.81%), Postives = 435/790 (55.06%), Query Frame = 3
Query: 273 DSNLKVSKQIDREELCPPQMML------------QLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFELAKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGV-EGNRNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSG---QEWINKIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEESRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFND--LIQEAMIVITVRDLNDSPPTFRLKDPSKSQLIISLETLQQGQICESIPFXXXXXXXXX-XXXXXXXXRLKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHG--NDSIETEITFKILF---INDPNVATQSKNQPPSSRNQ 2570
D+ L V IDRE +CP + L Q + CC + FQ+ + ++ S +I + V DENDN+P F PY T+ EN + I LP A DLD+ F + YK+ PF +GN S F L G P L++ S LDRE S Y F L A+D + +R+ E+ IK+ DINDN P F++ Y I E+ + + VTD DE +N ++ + + ++ I + F +D S + +R I+ +DYE + + F ++A D G LSSTA + I ++N ND +P I+ +R G+ ++ ++ E + I+A +QVSD DS++ ++CSL I HP+ YK+F + T + +DRE ++ + + + + C D D PL TN +I I + D+NDNPP FT++ Y G++ ENI V M I DKD N VTY I KNS++ YF ID+ +GKI + QS D+EK ++SF ++A D+ N LSS++ IIV + D NDNAP F + H++F V ENV + IGQI TD D+ PE+K +++ KS + N ++I +D +G+++T PIDREK +IT + ++N + N + E M++IT+ D+ND+PP F L +P+KS LI ++ + + C+ IP+ V DAD + N + CC+++L ++ NG+L L +T N +C+ V+L A+D N S++ +++F I ++D + +S N+ +++NQ
Sbjct: 73 DNRLSVVSNIDRESICPIKNSLNDYDQSAETYNSQQSSHSCKYDECCTVFSFQVD-SGIKISSFYILIKVLDENDNSPKFLPFLNPYQTLPENSQINTVILLPSAIDLDSEAFGIKYYKISKPFLIGNDSHFTLLDKIASGRPQLLLISPLDREVISEYRFILKAVDRENDDHRDISGVEVEIKVGDINDNPPVFDKTFYTANIVEHSKLVNVISFYVTDLDEGQNKQVSITIETENDYKKDQIKRFFQIDF---SPSLMTGSIRLIDEIDYETNPYKYSFNLIATDNGLPRLSSTAKVNIILINKNDQAPVIKVIRKGEIVSRSITMFENEPARTIVASLQVSDRDSLVTDIECSLDDYHLNFEITAINEIHPLGHYKEFIINTLKPLDREDDK----NQYLKINIYCSDQDKLTPLTTNLTIHINLFDINDNPPVFTRSKYQGELIENIPQAPVKMIEPILTLDKDHGKNAYVTYKIDSSKNSTDWEYFTIDADSGKISSRQSIDYEKNKLFSFNIIAIDKDQSN-LSSTALIIVHVIDANDNAPIFPKPHYSFTVRENVPVNTEIGQIETTDLDTRPENKIVKYFHKSYTNNY--QVIHVDQNSGKLKTIGPIDREKVRSITILITARNEASYQNKNLMDSECMVIITIEDVNDNPPIFSLINPAKSSLIFTINKGFRHENCQMIPYAVSDADHDEPNSDSCCILQLDNDQNGMLYLLSNTPNFLCLQNTMNTPGIYRVSLTATDNKNNPNKSLKAKVSFNIDVRHEVSDNPFSEKSDNKVHTTKNQ 851
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Planmine SMEST
Match: SMESG000048159.1 (SMESG000048159.1) HSP 1 Score: 399.053 bits (1024), Expect = 6.366e-121 Identity = 276/782 (35.29%), Postives = 431/782 (55.12%), Query Frame = 3
Query: 300 IDREELCPPQMMLQLNKVCGSIHTCCHILDFQISCNNEEMQSNFIRVFVDDENDNNPVFPIVQTPYCTIEENKPLGYRIPLPKAQDLDNATFSVSSYKLELPFKLGNSSDFEL-AKHFKDGVPYLIITSTLDREKTSMYTFTLIAIDGVEGN-RNTGKTEITIKIRDINDNAPKFERPIYIRTIKENVIVDPIFQILVTDEDEDENGRIDLKMHNSGQEWIN--KIFTLDILDQSIGKVQAQVRAINNLDYEQLYHSFEFKIVAQDGGRNSLSSTATLRIQILNVNDMSPEIRFVRNGQQITGGFSIDEGTLSNKILAYVQVSDADSMINQLQCSLLTPRNILMIEE-SRFRHPVNIYKQFSLRTTQNIDREANEPFLIDSKIIVTVQCDDYDNEIPLNTNASIFIIINDVNDNPPKFTQNVYYGQIEENINNHEVFMNAAIHAADKDLHLNGKVTYHIQDFKNSSNAMYFRIDSQNGKIYNSQSFDFEKESIYSFIVVATDQGHPNRLSSSSTIIVRIKDQNDNAPQFSQSHFAFFVDENVEIGHLIGQINATDRDSLPEHKDIRFIVKSDSQNRASKLITLDPLTGQIRTRYPIDREKTSTITFFVESKNPSRIFNDLIQ----EAMIVITVRDLNDSPPTF--RLKDPSKSQLIISLETLQQGQICESIPFXXXXXXXXXXXXXXXXXR-LKHNYNGLLSLADDTQNIICINQVPKKVKSLPVTLIASDKHGN--DSIETEITFKILFINDPN--VATQSKNQPPSSRNQKPEQAKDEI 2597
++RE +C ++ K C + CC ++ FQ + + FI + + D+ND P F ++ P+ I EN +G I LP A D D+ +SV Y L + L + DF L + P LI+ S LD EK + Y F L A D E + N+ T I I+I D+NDN PKF + Y I EN D + + V+D D NG + + + + E KIF I + + + IN+LDYE H FEF ++A D G SLSS+A ++I + N+ND P+I+F + G ++ SI EG ++ ++ V+V+DAD+ N + C L+ ++ ++ S+F +N YK F+L+T IDRE+N S + +T+ C D + + TN S+ I I DVNDN P F+Q +Y G ++EN N V I D+D LNGK ++++DF+N S++ F ID +GKI+ +S D+E ++ + F ++A D+G+ L+SSSTI + + D NDNAP+FS+SH+ F V ENV +G IG + ATD D+ ++KDI + ++ + S +D TG +RTR P+DRE +I+ V +KNP++ + ++ E ++I V D+ND+ P F RL K + I+ E G C +P+ V+D DD C L+++YN L SL DT + IC+ + P+K +S VTLIA D+ N + ++I+F +L INDP+ ++T + P SR P ++K+ I
Sbjct: 85 VNREAVCRDNPGEKVRKFCKA-DLCCKLIGFQY-LTPTDPGTFFILIKILDQNDKAPQFSSIKRPFFKIPENVEVGKVIDLPMAVDSDSEKYSVRRYSLSYIYHLDQTHDFRLHVTNDNPPRPQLIVNSKLDYEKINKYVFRLFAYDFDEKSIGNSCSTTIEIEIEDLNDNVPKFNQLTYNANIDENKRDDKLIKFTVSDPDSGRNGIVTVNIVDKTDELSKRFKIF-------EIQRNEFFLELINSLDYETDPHLFEFTLLATDQGTPSLSSSAQVKIHLKNLNDNGPKIKFKKLGFSVSNSVSIIEGLPAHSLVVEVRVTDADTHSNMIHCKLVDYNDLFYLDSPSKFNTLLN-YKPFNLKTINKIDRESNH----GSFLRITISCTDSEPSRQITTNESLNIQIEDVNDNAPMFSQQIYIGNVDENQVNVVVNFPKPIIVTDRDSGLNGKFEFYLEDFRNFSDSSDFLIDKISGKIFTQRSLDYETKNKFRFKIIAIDKGY-QPLTSSSTITINVLDLNDNAPRFSESHYIFNVFENVSVGWKIGTLQATDDDTDRKNKDIFYSIEPKGDH--SSYFDIDRYTGDLRTRKPLDRETLESISIKVTAKNPNKYSSHFVRNTDSEVDVMIKVMDVNDNAPKFIPRLNMKQKVEFIV--EQFVDGNTCTELPYTVQDIDDGGINGQNCCYTILENDYNKLFSLMTDTPSYICLQRKPEKYQSYTVTLIARDRPPNVEGGLTSKISFPVLIINDPHSKISTSGFSNHPDSRFPNPSESKNLI 847 The following BLAST results are available for this feature:
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Protocadherin 2 gamma c6 sCP1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000445 ID=SMED30000445|Name=Protocadherin 2 gamma c6 sCP1|organism=Schmidtea mediterranea sexual|type=transcript|length=3287bpback to top protein sequence of SMED30000445-orf-1 >SMED30000445-orf-1 ID=SMED30000445-orf-1|Name=SMED30000445-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1053bp MKIISTLLFSLIIAYTKCQFIHEFHITENSKIYKTIFNLKTLLISKSKIDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|
