Histone H3

Overview


Name	Histone H3
Smed ID	SMED30000270
Length (bp)	712

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Histone H3 (SMED30000270) t-SNE clustered cells

Violin plots show distribution of expression levels for Histone H3 (SMED30000270) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Histone H3 (SMED30000270) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Histone H3 (SMED30000270) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30000270

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 17

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
parenchyma	SMED30000270	SMESG000049112.1 SMESG000049109.1	JX070082	smed_ncbi_20200123	PMID:23629965 Zeng et al., 2013
X1 cell	SMED30000270	SMESG000049112.1 SMESG000049109.1	SmedASXL_003772	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
X2 cell	SMED30000270	SMESG000049112.1 SMESG000049109.1	SmedASXL_003772	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
pharynx	SMED30000270	SMESG000049112.1 SMESG000049109.1	dd_Smed_v4_532_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30000270	SMESG000049112.1 SMESG000049109.1	dd_Smed_v4_532_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30000270	SMESG000049112.1 SMESG000049109.1	dd_Smed_v4_532_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30000270	SMESG000049112.1 SMESG000049109.1	dd_Smed_v4_532_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30000270	SMESG000049112.1 SMESG000049109.1	dd_Smed_v4_532_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30000270	SMESG000049112.1 SMESG000049109.1	dd_Smed_v4_532_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchyma	SMED30000270	SMESG000049112.1 SMESG000049109.1	dd_Smed_v4_532_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30000270	SMESG000049112.1 SMESG000049109.1	dd_Smed_v4_532_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30000270	SMESG000049112.1 SMESG000049109.1	dd_Smed_v4_532_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30000270	SMESG000049112.1 SMESG000049109.1	Contig52141	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30000270	SMESG000049112.1 SMESG000049109.1	Contig52141	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
neoblast	SMED30000270	SMESG000049112.1 SMESG000049109.1	dd_Smed_v6_532_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
neoblast	SMED30000270	SMESG000049112.1 SMESG000049109.1	KC916784	smed_ncbi_20200123	PMID:24903754 Rouhana et al., 2014
chromatoid body	SMED30000270	SMESG000049112.1 SMESG000049109.1	KC916784	smed_ncbi_20200123	PMID:24903754 Rouhana et al., 2014

Note: Hover over icons to view figure legend

Homology

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BLAST of Histone H3 vs. Ensembl Human
Match: H3-3A (H3.3 histone A [Source:HGNC Symbol;Acc:HGNC:4764])

HSP 1 Score: 273.092 bits (697), Expect = 4.122e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Celegans
Match: his-71 (Histone H3.3 type 1 [Source:UniProtKB/Swiss-Prot;Acc:Q10453])

HSP 1 Score: 271.937 bits (694), Expect = 5.307e-94
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Celegans
Match: his-72 (Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U281])

HSP 1 Score: 270.781 bits (691), Expect = 1.486e-93
Identity = 133/136 (97.79%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Celegans
Match: his-63 (Histone H3 [Source:UniProtKB/Swiss-Prot;Acc:P08898])

HSP 1 Score: 262.307 bits (669), Expect = 3.462e-90
Identity = 129/136 (94.85%), Postives = 134/136 (98.53%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Celegans
Match: his-59 (Histone H3 [Source:UniProtKB/Swiss-Prot;Acc:P08898])

HSP 1 Score: 262.307 bits (669), Expect = 3.462e-90
Identity = 129/136 (94.85%), Postives = 134/136 (98.53%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Celegans
Match: his-55 (Histone H3 [Source:UniProtKB/Swiss-Prot;Acc:P08898])

HSP 1 Score: 262.307 bits (669), Expect = 3.462e-90
Identity = 129/136 (94.85%), Postives = 134/136 (98.53%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Fly
Match: His3.3A (gene:FBgn0014857 transcript:FBtr0079010)

HSP 1 Score: 273.092 bits (697), Expect = 1.975e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Fly
Match: His3.3A (gene:FBgn0014857 transcript:FBtr0333537)

HSP 1 Score: 273.092 bits (697), Expect = 1.975e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Fly
Match: His3.3A (gene:FBgn0014857 transcript:FBtr0333536)

HSP 1 Score: 273.092 bits (697), Expect = 1.975e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Fly
Match: His3.3B (gene:FBgn0004828 transcript:FBtr0071347)

HSP 1 Score: 273.092 bits (697), Expect = 1.975e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Fly
Match: His3.3B (gene:FBgn0004828 transcript:FBtr0071345)

HSP 1 Score: 273.092 bits (697), Expect = 1.975e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Zebrafish
Match: h3f3b.1 (H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65])

HSP 1 Score: 273.092 bits (697), Expect = 2.622e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Zebrafish
Match: h3f3c (H3 histone, family 3C [Source:ZFIN;Acc:ZDB-GENE-030131-8175])

HSP 1 Score: 273.092 bits (697), Expect = 2.622e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Xenopus
Match: wfikkn1 (WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:Xenbase;Acc:XB-GENE-923256])

HSP 1 Score: 273.092 bits (697), Expect = 3.737e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Xenopus
Match: snapc1 (small nuclear RNA activating complex polypeptide 1 [Source:Xenbase;Acc:XB-GENE-993180])

HSP 1 Score: 273.092 bits (697), Expect = 3.737e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of Histone H3 vs. Ensembl Xenopus
Match: polr3k (polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa [Source:Xenbase;Acc:XB-GENE-5913354])

HSP 1 Score: 273.092 bits (697), Expect = 3.737e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Xenopus
Match: lamtor2 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:Xenbase;Acc:XB-GENE-992364])

HSP 1 Score: 268.47 bits (685), Expect = 2.648e-92
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Xenopus
Match: hist2h3c (histone H3 [Source:NCBI gene;Acc:100493100])

HSP 1 Score: 268.47 bits (685), Expect = 2.648e-92
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Mouse
Match: H3f3a (H3.3 histone A [Source:MGI Symbol;Acc:MGI:1097686])

HSP 1 Score: 273.092 bits (697), Expect = 2.830e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Mouse
Match: H3f3b (H3.3 histone B [Source:MGI Symbol;Acc:MGI:1101768])

HSP 1 Score: 273.092 bits (697), Expect = 2.830e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Mouse
Match: H3c13 (H3 clustered histone 13 [Source:MGI Symbol;Acc:MGI:2448351])

HSP 1 Score: 268.47 bits (685), Expect = 2.005e-92
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of Histone H3 vs. UniProt/SwissProt
Match: sp|Q6P823|H33_XENTR (Histone H3.3 OS=Xenopus tropicalis OX=8364 GN=TGas113e22.1 PE=1 SV=3)

HSP 1 Score: 273.092 bits (697), Expect = 1.980e-93
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. UniProt/SwissProt
Match: sp|Q6PI79|H33_XENLA (Histone H3.3 OS=Xenopus laevis OX=8355 PE=1 SV=3)

HSP 1 Score: 273.092 bits (697), Expect = 1.980e-93
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. UniProt/SwissProt
Match: sp|P84248|H33_SPISO (Histone H3.3 OS=Spisula solidissima OX=6584 PE=2 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.980e-93
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. UniProt/SwissProt
Match: sp|P84245|H33_RAT (Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3-3b PE=1 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.980e-93
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. UniProt/SwissProt
Match: sp|P84246|H33_RABIT (Histone H3.3 OS=Oryctolagus cuniculus OX=9986 GN=H3-3A PE=2 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.980e-93
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of Histone H3 vs. TrEMBL
Match: A0A2H1CLU5 (Histone H3 OS=Fasciola hepatica OX=6192 GN=D915_04183 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 2.414e-93
Identity = 137/140 (97.86%), Postives = 140/140 (100.00%), Query Frame = 3

Query:   66 INIVMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            +N++MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   11 LNLLMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150

[Close]

BLAST of Histone H3 vs. TrEMBL
Match: A0A4E0RCN4 (Histone H3 OS=Fasciola hepatica OX=6192 GN=D915_002825 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 5.648e-93
Identity = 137/140 (97.86%), Postives = 140/140 (100.00%), Query Frame = 3

Query:   66 INIVMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            +N++MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   32 LNLLMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 171

[Close]

BLAST of Histone H3 vs. TrEMBL
Match: A0A3Q3K8E7 (Histone H3 OS=Monopterus albus OX=43700 PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 1.674e-92
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 3

Query:   69 NIVMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
             IVMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 GIVMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 139

[Close]

BLAST of Histone H3 vs. TrEMBL
Match: A0A3P8UG44 (Histone H3 OS=Amphiprion percula OX=161767 PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 1.126e-91
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 3

Query:   69 NIVMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
             I MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 GIAMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 139

[Close]

BLAST of Histone H3 vs. TrEMBL
Match: T2MEU0 (Histone H3 (Fragment) OS=Hydra vulgaris OX=6087 GN=H3F3A PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.370e-91
Identity = 134/139 (96.40%), Postives = 139/139 (100.00%), Query Frame = 3

Query:   69 NIVMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            +++MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   10 DVLMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 148

[Close]

BLAST of Histone H3 vs. Ensembl Cavefish
Match: ENSAMXT00000056477.1 (histone H3.3 [Source:NCBI gene;Acc:103046944])

HSP 1 Score: 273.092 bits (697), Expect = 2.223e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Cavefish
Match: si:ch1073-429i10.3 (histone H3.3 [Source:NCBI gene;Acc:103046944])

HSP 1 Score: 273.092 bits (697), Expect = 2.223e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Cavefish
Match: h3f3d (histone H3.3 [Source:NCBI gene;Acc:103046944])

HSP 1 Score: 273.092 bits (697), Expect = 2.223e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Cavefish
Match: ENSAMXT00000051731.1 (histone H3.3 [Source:NCBI gene;Acc:103046944])

HSP 1 Score: 273.092 bits (697), Expect = 2.223e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Cavefish
Match: si:dkey-23a13.21 (si:dkey-23a13.21 [Source:ZFIN;Acc:ZDB-GENE-160113-53])

HSP 1 Score: 247.284 bits (630), Expect = 5.848e-84
Identity = 126/137 (91.97%), Postives = 129/137 (94.16%), Query Frame = 3

Query:   78 MARTKQT-ARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQT  +     KAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    6 MARTKQTRPQVHRLAKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 142

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BLAST of Histone H3 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005970.1 (pep scaffold:Pmarinus_7.0:GL479001:12719:15748:1 gene:ENSPMAG00000005373.1 transcript:ENSPMAT00000005970.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 273.092 bits (697), Expect = 4.508e-95
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of Histone H3 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006727.1 (pep scaffold:Pmarinus_7.0:GL480101:14396:18168:1 gene:ENSPMAG00000006073.1 transcript:ENSPMAT00000006727.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 273.092 bits (697), Expect = 4.508e-95
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of Histone H3 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011162.1 (pep scaffold:Pmarinus_7.0:GL476820:703693:704103:-1 gene:ENSPMAG00000010135.1 transcript:ENSPMAT00000011162.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 266.544 bits (680), Expect = 2.171e-92
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLV LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of Histone H3 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011073.1 (pep scaffold:Pmarinus_7.0:GL476925:255214:255624:-1 gene:ENSPMAG00000010047.1 transcript:ENSPMAT00000011073.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 266.544 bits (680), Expect = 2.171e-92
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLV LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of Histone H3 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011065.1 (pep scaffold:Pmarinus_7.0:GL476925:237524:237934:-1 gene:ENSPMAG00000010039.1 transcript:ENSPMAT00000011065.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 266.544 bits (680), Expect = 2.171e-92
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLV LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of Histone H3 vs. Ensembl Yeast
Match: HHT1 (Histone H3; core histone protein required for chromatin assembly, part of heterochromatin-mediated telomeric and HM silencing; one of two identical histone H3 proteins (see HHT2); regulated by acetylation, methylation, and phosphorylation; H3K14 acetylation plays an important role in the unfolding of strongly positioned nucleosomes during repair of UV damage [Source:SGD;Acc:S000000214])

HSP 1 Score: 250.366 bits (638), Expect = 2.801e-86
Identity = 122/136 (89.71%), Postives = 131/136 (96.32%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLA+KAARKSAPSTGGVKKPHRY+PGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+GALQE+ EAYLV LFEDTNL AIHAKRVTI  KDI+LARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136

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BLAST of Histone H3 vs. Ensembl Yeast
Match: HHT2 (Histone H3; core histone protein required for chromatin assembly, part of heterochromatin-mediated telomeric and HM silencing; one of two identical histone H3 proteins (see HHT1); regulated by acetylation, methylation, and phosphorylation; H3K14 acetylation plays an important role in the unfolding of strongly positioned nucleosomes during repair of UV damage [Source:SGD;Acc:S000004976])

HSP 1 Score: 250.366 bits (638), Expect = 2.801e-86
Identity = 122/136 (89.71%), Postives = 131/136 (96.32%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLA+KAARKSAPSTGGVKKPHRY+PGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+GALQE+ EAYLV LFEDTNL AIHAKRVTI  KDI+LARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136

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BLAST of Histone H3 vs. Ensembl Yeast
Match: CSE4 (Histone H3-like centromere protein; associated with promoters, accessible chromatin, RNAPII-bound regions; phosphorylated Cse4p associates with centromeres; required for proper kinetochore function; levels regulated by E3 ubiquitin ligase Psh1p; phosphorylation may destabilize defective kinetochores to promote bi-orientation; ubiquitination of N-terminus regulates proteolysis for faithful chromosome segregation; yeast CSE4 can complement mutations in human homolog CENPA [Source:SGD;Acc:S000001532])

HSP 1 Score: 135.191 bits (339), Expect = 8.939e-40
Identity = 64/97 (65.98%), Postives = 79/97 (81.44%), Query Frame = 3

Query:  198 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 479
            +Y P  +AL EIR+YQ+ST+LLI K+PF RLV+E+  +F T   DLR+QS A+ ALQEASEAYLVGL E TNL A+HAKR+TIM KD+QLARRIRG+
Sbjct:  131 KYTPSELALYEIRKYQRSTDLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 227

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BLAST of Histone H3 vs. Ensembl Nematostella
Match: EDO31666 (Histone H3 [Source:UniProtKB/TrEMBL;Acc:A7SX94])

HSP 1 Score: 271.937 bits (694), Expect = 3.191e-94
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of Histone H3 vs. Ensembl Nematostella
Match: EDO40554 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S708])

HSP 1 Score: 272.707 bits (696), Expect = 2.010e-93
Identity = 149/205 (72.68%), Postives = 161/205 (78.54%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA-*VXXXXXXXXXICNKCS*C*SYLTVINII*CDFVNNIISMFRSFNAIFNEGLKYAYNFLK*KLVSNEI 689
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA  V   ++    I +K       + ++N     FVN+I      F  I  E  + A+   K  + S EI
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERAHEVLKQVHHDTGISSKA------MGIMN----SFVNDI------FERIAGEASRLAHYNKKSTITSREI 189

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BLAST of Histone H3 vs. Ensembl Nematostella
Match: EDO27768 (Histone H3 [Source:UniProtKB/TrEMBL;Acc:A7RJL1])

HSP 1 Score: 268.47 bits (685), Expect = 5.749e-93
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Nematostella
Match: EDO26659 (Histone H3 [Source:UniProtKB/TrEMBL;Acc:A7RJL1])

HSP 1 Score: 268.47 bits (685), Expect = 5.749e-93
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Nematostella
Match: EDO26704 (Histone H3 [Source:UniProtKB/TrEMBL;Acc:A7RJL1])

HSP 1 Score: 268.47 bits (685), Expect = 5.749e-93
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Medaka
Match: ENSORLT00000030026.1 (histone H3.3 [Source:NCBI gene;Acc:101175183])

HSP 1 Score: 273.092 bits (697), Expect = 2.209e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Medaka
Match: ENSORLT00000046325.1 (pep primary_assembly:ASM223467v1:13:17992240:17994436:1 gene:ENSORLG00000028044.1 transcript:ENSORLT00000046325.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 273.092 bits (697), Expect = 2.209e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Medaka
Match: ENSORLT00000029477.1 (pep primary_assembly:ASM223467v1:13:17996287:18000034:1 gene:ENSORLG00000024385.1 transcript:ENSORLT00000029477.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 273.092 bits (697), Expect = 2.209e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Medaka
Match: h3f3d (histone H3.3 [Source:NCBI gene;Acc:101163693])

HSP 1 Score: 273.092 bits (697), Expect = 2.209e-94
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Ensembl Medaka
Match: H3-3B (histone H3.3 [Source:NCBI gene;Acc:101160039])

HSP 1 Score: 272.707 bits (696), Expect = 4.140e-94
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 3

Query:   72 IVMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
              MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAA+GALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    3 FAMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 140

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BLAST of Histone H3 vs. Planmine SMEST
Match: SMESG000049109.1 (SMESG000049109.1)

HSP 1 Score: 273.863 bits (699), Expect = 8.934e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Planmine SMEST
Match: SMESG000049112.1 (SMESG000049112.1)

HSP 1 Score: 271.937 bits (694), Expect = 5.326e-94
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR ERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRAERA 136

[Close]

BLAST of Histone H3 vs. Planmine SMEST
Match: SMESG000074937.1 (SMESG000074937.1)

HSP 1 Score: 269.626 bits (688), Expect = 4.362e-93
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Planmine SMEST
Match: SMESG000074574.1 (SMESG000074574.1)

HSP 1 Score: 269.626 bits (688), Expect = 4.362e-93
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of Histone H3 vs. Planmine SMEST
Match: SMESG000074479.1 (SMESG000074479.1)

HSP 1 Score: 269.626 bits (688), Expect = 4.362e-93
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 3

Query:   78 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 485
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+AV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:

BLAST of Histone H3 vs. Ensembl Human
BLAST of Histone H3 vs. Ensembl Celegans
BLAST of Histone H3 vs. Ensembl Fly
BLAST of Histone H3 vs. Ensembl Zebrafish
BLAST of Histone H3 vs. Ensembl Xenopus
BLAST of Histone H3 vs. Ensembl Mouse
BLAST of Histone H3 vs. UniProt/SwissProt
BLAST of Histone H3 vs. TrEMBL
BLAST of Histone H3 vs. Ensembl Cavefish
BLAST of Histone H3 vs. Ensembl Sea Lamprey
BLAST of Histone H3 vs. Ensembl Yeast
BLAST of Histone H3 vs. Ensembl Nematostella
BLAST of Histone H3 vs. Ensembl Medaka
BLAST of Histone H3 vs. Planmine SMEST

BLAST of Histone H3 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
H3-3A	4.122e-94	99.26	H3.3 histone A [Source:HGNC Symbol;Acc:HGNC:4764]	[more]
H3-3A	4.122e-94	99.26	H3.3 histone A [Source:HGNC Symbol;Acc:HGNC:4764]	[more]
H3-3A	4.122e-94	99.26	H3.3 histone A [Source:HGNC Symbol;Acc:HGNC:4764]	[more]
H3-3A	4.122e-94	99.26	H3.3 histone A [Source:HGNC Symbol;Acc:HGNC:4764]	[more]
H3-3A	4.122e-94	99.26	H3.3 histone A [Source:HGNC Symbol;Acc:HGNC:4764]	[more]

BLAST of Histone H3 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
his-71	5.307e-94	98.53	Histone H3.3 type 1 [Source:UniProtKB/Swiss-Prot;...	[more]
his-72	1.486e-93	97.79	Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;...	[more]
his-63	3.462e-90	94.85	Histone H3 [Source:UniProtKB/Swiss-Prot;Acc:P0889...	[more]
his-59	3.462e-90	94.85	Histone H3 [Source:UniProtKB/Swiss-Prot;Acc:P0889...	[more]
his-55	3.462e-90	94.85	Histone H3 [Source:UniProtKB/Swiss-Prot;Acc:P0889...	[more]

BLAST of Histone H3 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
His3.3A	1.975e-94	99.26	gene:FBgn0014857 transcript:FBtr0079010	[more]
His3.3A	1.975e-94	99.26	gene:FBgn0014857 transcript:FBtr0333537	[more]
His3.3A	1.975e-94	99.26	gene:FBgn0014857 transcript:FBtr0333536	[more]
His3.3B	1.975e-94	99.26	gene:FBgn0004828 transcript:FBtr0071347	[more]
His3.3B	1.975e-94	99.26	gene:FBgn0004828 transcript:FBtr0071345	[more]

BLAST of Histone H3 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
h3f3b.1	2.622e-94	99.26	H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-...	[more]
h3f3c	2.622e-94	99.26	H3 histone, family 3C [Source:ZFIN;Acc:ZDB-GENE-03...	[more]
h3f3c	2.622e-94	99.26	H3 histone, family 3C [Source:ZFIN;Acc:ZDB-GENE-03...	[more]
h3f3b.1	2.622e-94	99.26	H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-...	[more]
h3f3b.1	2.622e-94	99.26	H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-...	[more]

BLAST of Histone H3 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
wfikkn1	3.737e-94	99.26	WAP, follistatin/kazal, immunoglobulin, kunitz and...	[more]
snapc1	3.737e-94	99.26	small nuclear RNA activating complex polypeptide 1...	[more]
polr3k	3.737e-94	99.26	polymerase (RNA) III (DNA directed) polypeptide K,...	[more]
lamtor2	2.648e-92	97.79	late endosomal/lysosomal adaptor, MAPK and MTOR ac...	[more]
hist2h3c	2.648e-92	97.79	histone H3 [Source:NCBI gene;Acc:100493100]	[more]

BLAST of Histone H3 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
H3f3a	2.830e-94	99.26	H3.3 histone A [Source:MGI Symbol;Acc:MGI:1097686]	[more]
H3f3a	2.830e-94	99.26	H3.3 histone A [Source:MGI Symbol;Acc:MGI:1097686]	[more]
H3f3b	2.830e-94	99.26	H3.3 histone B [Source:MGI Symbol;Acc:MGI:1101768]	[more]
H3f3b	2.830e-94	99.26	H3.3 histone B [Source:MGI Symbol;Acc:MGI:1101768]	[more]
H3c13	2.005e-92	97.79	H3 clustered histone 13 [Source:MGI Symbol;Acc:MGI...	[more]

BLAST of Histone H3 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q6P823\|H33_XENTR	1.980e-93	99.26	Histone H3.3 OS=Xenopus tropicalis OX=8364 GN=TGas...	[more]
sp\|Q6PI79\|H33_XENLA	1.980e-93	99.26	Histone H3.3 OS=Xenopus laevis OX=8355 PE=1 SV=3	[more]
sp\|P84248\|H33_SPISO	1.980e-93	99.26	Histone H3.3 OS=Spisula solidissima OX=6584 PE=2 S...	[more]
sp\|P84245\|H33_RAT	1.980e-93	99.26	Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3-3...	[more]
sp\|P84246\|H33_RABIT	1.980e-93	99.26	Histone H3.3 OS=Oryctolagus cuniculus OX=9986 GN=H...	[more]

BLAST of Histone H3 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A2H1CLU5	2.414e-93	97.86	Histone H3 OS=Fasciola hepatica OX=6192 GN=D915_04...	[more]
A0A4E0RCN4	5.648e-93	97.86	Histone H3 OS=Fasciola hepatica OX=6192 GN=D915_00...	[more]
A0A3Q3K8E7	1.674e-92	98.56	Histone H3 OS=Monopterus albus OX=43700 PE=3 SV=1	[more]
A0A3P8UG44	1.126e-91	97.84	Histone H3 OS=Amphiprion percula OX=161767 PE=3 SV...	[more]
T2MEU0	1.370e-91	96.40	Histone H3 (Fragment) OS=Hydra vulgaris OX=6087 GN...	[more]

BLAST of Histone H3 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSAMXT00000056477.1	2.223e-94	99.26	histone H3.3 [Source:NCBI gene;Acc:103046944]	[more]
si:ch1073-429i10.3	2.223e-94	99.26	histone H3.3 [Source:NCBI gene;Acc:103046944]	[more]
h3f3d	2.223e-94	99.26	histone H3.3 [Source:NCBI gene;Acc:103046944]	[more]
ENSAMXT00000051731.1	2.223e-94	99.26	histone H3.3 [Source:NCBI gene;Acc:103046944]	[more]
si:dkey-23a13.21	5.848e-84	91.97	si:dkey-23a13.21 [Source:ZFIN;Acc:ZDB-GENE-160113-...	[more]

BLAST of Histone H3 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000005970.1	4.508e-95	99.26	pep scaffold:Pmarinus_7.0:GL479001:12719:15748:1 g...	[more]
ENSPMAT00000006727.1	4.508e-95	99.26	pep scaffold:Pmarinus_7.0:GL480101:14396:18168:1 g...	[more]
ENSPMAT00000011162.1	2.171e-92	97.06	pep scaffold:Pmarinus_7.0:GL476820:703693:704103:-...	[more]
ENSPMAT00000011073.1	2.171e-92	97.06	pep scaffold:Pmarinus_7.0:GL476925:255214:255624:-...	[more]
ENSPMAT00000011065.1	2.171e-92	97.06	pep scaffold:Pmarinus_7.0:GL476925:237524:237934:-...	[more]

BLAST of Histone H3 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3


Match Name	E-value	Identity	Description
HHT1	2.801e-86	89.71	Histone H3; core histone protein required for chro...	[more]
HHT2	2.801e-86	89.71	Histone H3; core histone protein required for chro...	[more]
CSE4	8.939e-40	65.98	Histone H3-like centromere protein; associated wit...	[more]

BLAST of Histone H3 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO31666	3.191e-94	98.53	Histone H3 [Source:UniProtKB/TrEMBL;Acc:A7SX94]	[more]
EDO40554	2.010e-93	72.68	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO27768	5.749e-93	97.79	Histone H3 [Source:UniProtKB/TrEMBL;Acc:A7RJL1]	[more]
EDO26659	5.749e-93	97.79	Histone H3 [Source:UniProtKB/TrEMBL;Acc:A7RJL1]	[more]
EDO26704	5.749e-93	97.79	Histone H3 [Source:UniProtKB/TrEMBL;Acc:A7RJL1]	[more]

BLAST of Histone H3 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000030026.1	2.209e-94	99.26	histone H3.3 [Source:NCBI gene;Acc:101175183]	[more]
ENSORLT00000046325.1	2.209e-94	99.26	pep primary_assembly:ASM223467v1:13:17992240:17994...	[more]
ENSORLT00000029477.1	2.209e-94	99.26	pep primary_assembly:ASM223467v1:13:17996287:18000...	[more]
h3f3d	2.209e-94	99.26	histone H3.3 [Source:NCBI gene;Acc:101163693]	[more]
H3-3B	4.140e-94	97.83	histone H3.3 [Source:NCBI gene;Acc:101160039]	[more]

BLAST of Histone H3 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000049109.1	8.934e-95	100.00	SMESG000049109.1	[more]
SMESG000049112.1	5.326e-94	99.26	SMESG000049112.1	[more]
SMESG000074937.1	4.362e-93	97.79	SMESG000074937.1	[more]
SMESG000074574.1	4.362e-93	97.79	SMESG000074574.1	[more]
SMESG000074479.1	4.362e-93	97.79	SMESG000074479.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30000270 ID=SMED30000270|Name=Histone H3|organism=Schmidtea mediterranea sexual|type=transcript|length=712bp
TGTTTTTGTTTTAATAGACAATAAATTTATCTTTGTTTACATAATTATCT
TAAACATTTAGCCTAATTAATATTGTAATGGCACGTACAAAACAGACAGC
AAGAAAATCAACTGGTGGAAAAGCTCCACGTAAACAATTGGCTACCAAAG
CCGCAAGAAAATCCGCACCATCAACCGGAGGTGTCAAGAAACCACATAGA
TATCGTCCTGGAACTGTTGCTCTTAGAGAAATTAGAAGATATCAAAAGAG
CACAGAATTACTCATTAGAAAACTTCCATTCCAGCGATTAGTTCGTGAAA
TCGCTCAAGATTTCAAAACTGATCTGCGATTTCAAAGTGCCGCAGTTGGA
GCACTGCAAGAAGCTAGCGAAGCATATTTGGTTGGATTATTCGAAGACAC
CAATCTCTGTGCCATTCATGCAAAGCGAGTAACTATCATGCCAAAAGACA
TTCAATTGGCAAGAAGAATTCGTGGTGAAAGAGCATAAGTTAACTTATTT
TTGAACTTATAGTAGAATATTTGTAATAAATGTAGTTAATGTTGATCATA
TTTAACTGTTATTAATATAATTTAATGTGACTTTGTTAATAATATTATTT
CTATGTTTAGAAGTTTTAATGCAATTTTCAATGAAGGGTTGAAGTATGCT
TATAATTTCTTGAAATAAAAGCTAGTCAGCAATGAAATTTGTTTTAATAA
ATTGTTTGTCGC

protein sequence of SMED30000270-orf-1

>SMED30000270-orf-1 ID=SMED30000270-orf-1|Name=SMED30000270-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=137bp
MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALR
EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVGALQEASEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000429	neoblast
PLANA:0002020	chromatoid body
PLANA:0002109	X1 cell
PLANA:0002111	X2 cell
PLANA:0002142	parenchyma

Vocabulary: **INTERPRO**
Term	Definition
IPR000164	Histone_H3/CENP-A
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3

Vocabulary: **cellular component**
Term	Definition
GO:0000786	nucleosome
GO:0005634	nucleus
GO:0005694	chromosome

Vocabulary: **molecular function**
Term	Definition
GO:0003677	DNA binding
GO:0046982	protein heterodimerization activity

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 34..55 score: 93.58 coord: 114..135 score: 94.86 coord: 98..114 score: 96.93 coord: 3..17 score: 97.1 coord: 17..31 score: 92.32 coord: 58..75 score: 97.46 coord: 80..98 score: 84.1
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 34..136 e-value: 9.5E-74 score: 261.0
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 1..136
IPR000164	Histone H3/CENP-A	PROSITE	PS00959	HISTONE_H3_2	coord: 67..75
IPR000164	Histone H3/CENP-A	PROSITE	PS00322	HISTONE_H3_1	coord: 15..21
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 1..132 e-value: 8.3E-54 score: 181.5
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 2..136 e-value: 2.9E-79 score: 265.6
IPR009072	Histone-fold	SUPERFAMILY	SSF47113	Histone-fold	coord: 2..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR11426:SF224		coord: 1..136