60S ribosomal protein L10a
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30000240 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 13
Homology
BLAST of 60S ribosomal protein L10a vs. Ensembl Human
Match: RPL10A (ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]) HSP 1 Score: 294.664 bits (753), Expect = 4.753e-101 Identity = 156/216 (72.22%), Postives = 189/216 (87.50%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 SK+S+DTL E V VL + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Match: rpl-1 (60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]) HSP 1 Score: 297.36 bits (760), Expect = 1.228e-102 Identity = 156/217 (71.89%), Postives = 189/217 (87.10%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+S+++LNE +A VLK S E KPRKF ETIELQI LKNYDPQKDKRF+GS++L++IPRP MK+CV GDQ H+DEA A +IPSM + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L K D++++T+KFQMKKVLCL VAVG+V +TQEEL NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y Sbjct: 1 MSKVSRESLNEAIAEVLKGSSE-KPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPRPNMKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Match: rpl-1 (60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]) HSP 1 Score: 297.36 bits (760), Expect = 1.228e-102 Identity = 156/217 (71.89%), Postives = 189/217 (87.10%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+S+++LNE +A VLK S E KPRKF ETIELQI LKNYDPQKDKRF+GS++L++IPRP MK+CV GDQ H+DEA A +IPSM + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L K D++++T+KFQMKKVLCL VAVG+V +TQEEL NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y Sbjct: 1 MSKVSRESLNEAIAEVLKGSSE-KPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPRPNMKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Match: rpl-1 (60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]) HSP 1 Score: 207.223 bits (526), Expect = 6.865e-68 Identity = 112/155 (72.26%), Postives = 135/155 (87.10%), Query Frame = 2 Query: 251 MKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MK+CV GDQ H+DEA A +IPSM + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L K D++++T+KFQMKKVLCL VAVG+V +TQEEL NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y Sbjct: 1 MKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 155
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Match: rpl-1 (60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]) HSP 1 Score: 207.223 bits (526), Expect = 6.865e-68 Identity = 112/155 (72.26%), Postives = 135/155 (87.10%), Query Frame = 2 Query: 251 MKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MK+CV GDQ H+DEA A +IPSM + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L K D++++T+KFQMKKVLCL VAVG+V +TQEEL NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y Sbjct: 1 MKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 155
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Match: rpl-1 (60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]) HSP 1 Score: 207.223 bits (526), Expect = 6.865e-68 Identity = 112/155 (72.26%), Postives = 135/155 (87.10%), Query Frame = 2 Query: 251 MKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MK+CV GDQ H+DEA A +IPSM + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L K D++++T+KFQMKKVLCL VAVG+V +TQEEL NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y Sbjct: 1 MKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 155
BLAST of 60S ribosomal protein L10a vs. Ensembl Fly
Match: RpL10Ab (gene:FBgn0036213 transcript:FBtr0076032) HSP 1 Score: 288.886 bits (738), Expect = 4.154e-99 Identity = 152/216 (70.37%), Postives = 189/216 (87.50%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 SK+S+DTL E V +L+ S + K R F ET+ELQI LKNYDPQKDKRF+G+VKL++IPRPKMK+C+LGDQQH DEA ANN+ MD E+LKKLNK+KKL+KKLAK YDAFLAS+S+IKQIPR+LGPGLNKAGKFP ++SH E+++ K++++KSTIKFQMKKVLCL VAVG+V M +EL+QN+++SINFLVSLLKK WQNVR+L++KSSMG QRLY Sbjct: 3 SKVSRDTLYEGVNGLLEASAKKK-RGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLKKNWQNVRSLHVKSSMGPPQRLY 217
BLAST of 60S ribosomal protein L10a vs. Ensembl Fly
Match: RpL10Aa (gene:FBgn0038281 transcript:FBtr0083024) HSP 1 Score: 202.986 bits (515), Expect = 2.654e-65 Identity = 118/217 (54.38%), Postives = 160/217 (73.73%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 +SK+S+DT+ V ++L + + K ET+ELQI L++YDP K KRF+GSV L ++ P++K+CV GDQ+H +A A + +DVE+LKKLNKD KL KKL+K YD FLAS+S+IKQIPR+LGPGL AGKF ++ GE++ K+ L ST K MK++ CL V VG+V M EEL++NI++SINFLVSLLK WQNVR+L+IKSS+G +LY Sbjct: 2 VSKVSRDTIYVAVKNIL-LNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAVPQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQIPRLLGPGLTNAGKFLTPLARGESMSSKIKIL-STKKKHMKRMECLSVNVGHVGMHPEELARNIAISINFLVSLLKDNWQNVRSLHIKSSLGVPHQLY 216
BLAST of 60S ribosomal protein L10a vs. Ensembl Fly
Match: RpL10Ab (gene:FBgn0036213 transcript:FBtr0345073) HSP 1 Score: 68.1662 bits (165), Expect = 5.143e-15 Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVK 226 SK+S+DTL E V +L+ S + K R F ET+ELQI LKNYDPQKDKRF+G+VK Sbjct: 3 SKVSRDTLYEGVNGLLEASAK-KKRGFLETVELQIGLKNYDPQKDKRFSGTVK 54
BLAST of 60S ribosomal protein L10a vs. Ensembl Zebrafish
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:323305]) HSP 1 Score: 293.893 bits (751), Expect = 6.422e-101 Identity = 156/217 (71.89%), Postives = 186/217 (85.71%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+S+DTL E V V S K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L+ PRPK +CVLGDQQH DEA A +P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL KVD++KSTIKFQMKKVLCL VAVG+VKM++EEL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 1 MSKVSRDTLYEAVKEVQAGS-RRKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKAAELPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLGTKVDEVKSTIKFQMKKVLCLAVAVGHVKMSEEELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
BLAST of 60S ribosomal protein L10a vs. Ensembl Zebrafish
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:323305]) HSP 1 Score: 227.639 bits (579), Expect = 1.144e-75 Identity = 121/163 (74.23%), Postives = 144/163 (88.34%), Query Frame = 2 Query: 227 LRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 L+ PRPK +CVLGDQQH DEA A +P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL KVD++KSTIKFQMKKVLCL VAVG+VKM++EEL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 2 LKTTPRPKFSVCVLGDQQHCDEAKAAELPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLGTKVDEVKSTIKFQMKKVLCLAVAVGHVKMSEEELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 164
BLAST of 60S ribosomal protein L10a vs. Ensembl Zebrafish
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:323305]) HSP 1 Score: 69.707 bits (169), Expect = 2.365e-15 Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKL 229 MSK+S+DTL E V V S K RKF ET+ELQI+LKNYDPQKDKRF+G+V+ Sbjct: 1 MSKVSRDTLYEAVKEVQAGSRRKK-RKFLETVELQISLKNYDPQKDKRFSGTVRF 54
BLAST of 60S ribosomal protein L10a vs. Ensembl Xenopus
Match: dnajc6 (DnaJ heat shock protein family (Hsp40) member C6 [Source:Xenbase;Acc:XB-GENE-975869]) HSP 1 Score: 299.286 bits (765), Expect = 5.244e-103 Identity = 159/216 (73.61%), Postives = 191/216 (88.43%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 SK+S+DTL E V VL+ S + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A ++P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENLV KVD++KSTIKFQMKKVLCL VAVG+VK+T+EEL NI +SINFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 3 SKVSRDTLYEAVREVLQGS-KKKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of 60S ribosomal protein L10a vs. Ensembl Xenopus
Match: dnajc6 (DnaJ heat shock protein family (Hsp40) member C6 [Source:Xenbase;Acc:XB-GENE-975869]) HSP 1 Score: 299.671 bits (766), Expect = 2.410e-102 Identity = 162/228 (71.05%), Postives = 196/228 (85.96%), Query Frame = 2 Query: 32 YFNYKLFKFCTMSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 YFN + + SK+S+DTL E V VL+ S + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A ++P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENLV KVD++KSTIKFQMKKVLCL VAVG+VK+T+EEL NI +SINFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 41 YFNIQFYS----SKVSRDTLYEAVREVLQGS-KKKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKKNWQNVRALYIKSTMGKPQRLY 263
BLAST of 60S ribosomal protein L10a vs. Ensembl Xenopus
Match: dnajc6 (DnaJ heat shock protein family (Hsp40) member C6 [Source:Xenbase;Acc:XB-GENE-975869]) HSP 1 Score: 296.59 bits (758), Expect = 7.639e-102 Identity = 158/217 (72.81%), Postives = 190/217 (87.56%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 M +S+DTL E V VL+ S + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A ++P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENLV KVD++KSTIKFQMKKVLCL VAVG+VK+T+EEL NI +SINFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 1 MVLVSRDTLYEAVREVLQGS-KKKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Match: Rpl10a (ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877]) HSP 1 Score: 296.975 bits (759), Expect = 4.259e-102 Identity = 157/217 (72.35%), Postives = 190/217 (87.56%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+S+DTL E V VL + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 1 MSKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Match: Rpl10a (ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877]) HSP 1 Score: 294.664 bits (753), Expect = 3.263e-101 Identity = 156/216 (72.22%), Postives = 189/216 (87.50%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 SK+S+DTL E V VL + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Match: Rpl10a (ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877]) HSP 1 Score: 235.728 bits (600), Expect = 2.589e-78 Identity = 135/216 (62.50%), Postives = 164/216 (75.93%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 SK+S+DTL E V VL + Q+ +R KL++ PRPK +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 3 SKVSRDTLYEAVREVL-----------------------HGNQRKRR-----KLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 190
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Match: Rpl10a (ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877]) HSP 1 Score: 182.956 bits (463), Expect = 5.964e-58 Identity = 100/186 (53.76%), Postives = 127/186 (68.28%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSI 625 SK+S+DTL E V VL + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A +IP MD+E A + K + GLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL NI +++ Sbjct: 3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIE-----------------------ALKKLNKNKKLVKKLGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAV 164
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Match: Rpl10a (ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877]) HSP 1 Score: 120.939 bits (302), Expect = 2.520e-34 Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVES 331 SK+S+DTL E V VL + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A +IP MD+E+ Sbjct: 3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEA 89
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Match: sp|Q7ZYS8|RL10A_XENLA (60S ribosomal protein L10a OS=Xenopus laevis OX=8355 GN=rpl10a PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 3.857e-102 Identity = 159/216 (73.61%), Postives = 191/216 (88.43%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 SK+S+DTL E V VL+ S + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A ++P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENLV KVD++KSTIKFQMKKVLCL VAVG+VK+T+EEL NI +SINFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 3 SKVSRDTLYEAVREVLQGS-KKKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSLCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Match: sp|Q9N4I4|RL10A_CAEEL (60S ribosomal protein L10a OS=Caenorhabditis elegans OX=6239 GN=rpl-1 PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 1.562e-101 Identity = 156/217 (71.89%), Postives = 189/217 (87.10%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+S+++LNE +A VLK S E KPRKF ETIELQI LKNYDPQKDKRF+GS++L++IPRP MK+CV GDQ H+DEA A +IPSM + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L K D++++T+KFQMKKVLCL VAVG+V +TQEEL NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y Sbjct: 1 MSKVSRESLNEAIAEVLKGSSE-KPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPRPNMKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Match: sp|Q90YV8|RL10A_ICTPU (60S ribosomal protein L10a OS=Ictalurus punctatus OX=7998 GN=rpl10a PE=2 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 1.276e-100 Identity = 155/217 (71.43%), Postives = 188/217 (86.64%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+S+DTL E V V S+ +K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L+ PRPK +CVLGDQQH DEA A IP MD+E+LKKLNK+KK++KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL KVD++KSTIKFQMKKVLCL VAVG+V+M+++EL NI +++NFLVSLLKK WQNVRALYIKSSMG+ QRLY Sbjct: 1 MSKVSRDTLYEAVREVQAGSI-SKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKAAEIPHMDIEALKKLNKNKKMVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVRMSEDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSSMGKPQRLY 216
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Match: sp|P62907|RL10A_RAT (60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2) HSP 1 Score: 294.664 bits (753), Expect = 2.282e-100 Identity = 156/216 (72.22%), Postives = 189/216 (87.50%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 SK+S+DTL E V VL + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Match: sp|P62906|RL10A_HUMAN (60S ribosomal protein L10a OS=Homo sapiens OX=9606 GN=RPL10A PE=1 SV=2) HSP 1 Score: 294.664 bits (753), Expect = 2.282e-100 Identity = 156/216 (72.22%), Postives = 189/216 (87.50%), Query Frame = 2 Query: 68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 SK+S+DTL E V VL + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Match: T1G5H8 (Ribosomal protein OS=Helobdella robusta OX=6412 GN=20216325 PE=3 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 5.896e-105 Identity = 164/217 (75.58%), Postives = 196/217 (90.32%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 SKIS+D+L E+VA++L +S E K RKFTET+ELQI+LKNYDPQKDKRF+G+VKLRNIPRPKM ICVLGDQQH DEA AN++ MD E+LKKLNK+KKLIKKLAK+YDAFLASDS+IKQIPRI+GPGLNKAGKFP M++HGE++ K++++K+TIKFQMKKVLCL VAVGNV MTQ+EL NI+++INFLVSLLKK WQNVR+LYIKS+MG VQRLY Sbjct: 17 FSKISRDSLAESVAALLTYSQEKK-RKFTETVELQISLKNYDPQKDKRFSGTVKLRNIPRPKMAICVLGDQQHCDEAKANSVECMDAEALKKLNKNKKLIKKLAKKYDAFLASDSLIKQIPRIVGPGLNKAGKFPSMLTHGESMTGKIEEVKATIKFQMKKVLCLSVAVGNVNMTQDELVSNITMAINFLVSLLKKNWQNVRSLYIKSTMGPVQRLY 232
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Match: B0Z9L5 (Ribosomal protein OS=Lineus viridis OX=56195 PE=2 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.056e-103 Identity = 158/217 (72.81%), Postives = 194/217 (89.40%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+S++TLNE V+++L +S ETK RKFTE++ELQI+LKNYDPQKDKRF G+VKL+NIPRPK+KICVLGDQQH DEA AN +P+MDVE+LKKLNK+KKL+KKLAK+YD FLASDS+IKQIPRILGPGLNKAGKFP ++SH E +V K+++ K+TIKFQMKKVLCL AVG+V+MTQ+EL N ++INFLVSLLKK WQNV+ALY+KS+MG QR+Y Sbjct: 1 MSKLSRETLNEAVSAILAYSTETKKRKFTESVELQISLKNYDPQKDKRFTGTVKLKNIPRPKLKICVLGDQQHCDEAKANELPNMDVEALKKLNKNKKLVKKLAKKYDGFLASDSLIKQIPRILGPGLNKAGKFPSVLSHNEAMVAKIEESKATIKFQMKKVLCLSAAVGHVQMTQDELVANCILAINFLVSLLKKNWQNVKALYVKSTMGPPQRIY 217
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Match: F1LDI6 (Ribosomal protein OS=Ascaris suum OX=6253 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.194e-103 Identity = 163/217 (75.12%), Postives = 191/217 (88.02%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSKI +DTL E V VLK S E K RKF ET+ELQ+ALKNYDPQKDKRF+GSV+L+N+PRPKMK+C+LGDQQH DEANANNIP M+ E LKKLNK+KKLIKKLAK YDAFLAS+++IKQIPRILGPGLNKAGKFP +++H E L KV++++STIKFQMKKVLCL VAVG+V+MTQ+EL NIS+SINFLVSLLKK WQNVR+L+IKS+MG QRLY Sbjct: 1 MSKIPRDTLIECVGEVLKASQEKK-RKFRETVELQVALKNYDPQKDKRFSGSVRLKNVPRPKMKVCILGDQQHCDEANANNIPCMNAEDLKKLNKNKKLIKKLAKSYDAFLASEALIKQIPRILGPGLNKAGKFPTVVAHSEPLAAKVEEIRSTIKFQMKKVLCLSVAVGHVEMTQDELVSNISLSINFLVSLLKKSWQNVRSLHIKSTMGPPQRLY 216
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Match: A0A0N4VPE1 (Ribosomal protein OS=Enterobius vermicularis OX=51028 GN=EVEC_LOCUS12036 PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.316e-103 Identity = 160/221 (72.40%), Postives = 195/221 (88.24%), Query Frame = 2 Query: 53 KFCTMSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 +F MSKIS+DTL+E ++ VLK+S E K RKF ET+ELQ+ALKNYDPQKDKRF+GSV+L+ +PRPKMK+C+LGDQQH DEAN NNIP M+ E LKKLNK+KKLIKKLAK YDAFLAS+++IKQIPRILGPGLNKAGKFP ++SH E L KV++++STIKFQMKKVLCL VAVG+V+MT+ EL+QNIS+S+NFLVSLLKK WQN+R++ IKS+MG QRLY Sbjct: 3 RFEKMSKISRDTLHECISEVLKYSQEKK-RKFRETVELQVALKNYDPQKDKRFSGSVRLKTVPRPKMKVCILGDQQHCDEANNNNIPCMNAEDLKKLNKNKKLIKKLAKGYDAFLASEALIKQIPRILGPGLNKAGKFPTVVSHSEPLAAKVEEIRSTIKFQMKKVLCLSVAVGHVEMTEAELAQNISLSVNFLVSLLKKNWQNIRSINIKSTMGPAQRLY 222
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Match: A0A0B2VN18 (Ribosomal protein OS=Toxocara canis OX=6265 GN=rpl-10a PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 3.474e-103 Identity = 160/217 (73.73%), Postives = 192/217 (88.48%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+ +DTL E V VLKFS E K RKF ET+ELQ+ALKNYDPQKDKRF+GSV+L+N+PRPKMK+C+LGDQQH DEANANNIP M+ E LKKLNK+KKLIKKLAK YDAFLAS+++IKQIPRILGPGLNKAGKFP +++H E L KV++++STIKFQMKKVLCL VAVG+V+M+Q+EL NI++SINFLVSLLKK WQNVR+L++KS+MG QRLY Sbjct: 1 MSKVPRDTLIECVGEVLKFSQEKK-RKFRETVELQVALKNYDPQKDKRFSGSVRLKNVPRPKMKVCILGDQQHCDEANANNIPCMNAEDLKKLNKNKKLIKKLAKSYDAFLASEALIKQIPRILGPGLNKAGKFPTVVAHSEPLAAKVEEIRSTIKFQMKKVLCLSVAVGHVEMSQDELVSNIALSINFLVSLLKKSWQNVRSLHVKSTMGPPQRLY 216
BLAST of 60S ribosomal protein L10a vs. Ensembl Cavefish
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:103045470]) HSP 1 Score: 291.582 bits (745), Expect = 4.543e-100 Identity = 154/217 (70.97%), Postives = 187/217 (86.18%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+S+DTL E V V S+ K +KF ET+ELQI+LKNYDPQKDKRF+G+V+L+ PRPK +CVLGDQQH DEA A IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL KVD++KSTIKFQMKKVLCL VAVG+V+M+++EL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 1 MSKVSRDTLYEAVREVQSGSI-AKRKKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKAAEIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVRMSEDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
BLAST of 60S ribosomal protein L10a vs. Ensembl Sea Lamprey
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:323305]) HSP 1 Score: 295.819 bits (756), Expect = 1.700e-102 Identity = 154/217 (70.97%), Postives = 189/217 (87.10%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+S+DTL+E V +L S + + R F ET+ELQI+LKNYDPQKDKRF+G+V+L+N PRPK +C+LGDQQH DEA A NIP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+ KVD++KSTIKFQMKKVLCL VAVG+VKMT++EL N+ ++INFLVSLLKK WQNVRALY+KS+MG QRLY Sbjct: 1 MSKVSRDTLHEAVRELLLGSQKNRKR-FRETVELQISLKNYDPQKDKRFSGTVRLKNTPRPKFSVCLLGDQQHCDEAEAANIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMASKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVSNLHLAINFLVSLLKKNWQNVRALYLKSTMGRPQRLY 216
BLAST of 60S ribosomal protein L10a vs. Ensembl Yeast
Match: RPL1A (Ribosomal 60S subunit protein L1A; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1A has a paralog, RPL1B, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal [Source:SGD;Acc:S000006141]) HSP 1 Score: 239.195 bits (609), Expect = 2.163e-80 Identity = 130/217 (59.91%), Postives = 168/217 (77.42%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSKI+ + E V +LK+S ETK R F ET+ELQ+ LKNYDPQ+DKRF+GS+KL N PRP M IC+ GD +D A + + +M V+ LKKLNK+KKLIKKL+K+Y+AF+AS+ +IKQ+PR+LGP L+KAGKFP +SH ++L KV D++STIKFQ+KKVLCL VAVGNV+M ++ L I +S+NF VSLLKK WQNV +L +KSSMG RLY Sbjct: 1 MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
BLAST of 60S ribosomal protein L10a vs. Ensembl Yeast
Match: RPL1B (Ribosomal 60S subunit protein L1B; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1B has a paralog, RPL1A, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal [Source:SGD;Acc:S000003103]) HSP 1 Score: 239.195 bits (609), Expect = 2.163e-80 Identity = 130/217 (59.91%), Postives = 168/217 (77.42%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSKI+ + E V +LK+S ETK R F ET+ELQ+ LKNYDPQ+DKRF+GS+KL N PRP M IC+ GD +D A + + +M V+ LKKLNK+KKLIKKL+K+Y+AF+AS+ +IKQ+PR+LGP L+KAGKFP +SH ++L KV D++STIKFQ+KKVLCL VAVGNV+M ++ L I +S+NF VSLLKK WQNV +L +KSSMG RLY Sbjct: 1 MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
BLAST of 60S ribosomal protein L10a vs. Ensembl Nematostella
Match: EDO48328 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJT6]) HSP 1 Score: 54.6842 bits (130), Expect = 5.092e-9 Identity = 28/104 (26.92%), Postives = 55/104 (52.88%), Query Frame = 2 Query: 383 YDAFLASDSVIKQIPRILGPGLNKAGKFPVMIS-HGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSS 691 YD FL D++ +PR+LG KFP+ ++ NL +++ + + C + VG+ ++E+ NI +++ L ++ +GW N+++L IK+S Sbjct: 111 YDIFLCDDAIYHLLPRVLGKAFFAKKKFPLPVNLKKTNLQGEINKALQSTYISLGHGSCSAMKVGHTGQEKKEVISNIVEAVSGLAKIIPRGWNNIQSLNIKTS 214
BLAST of 60S ribosomal protein L10a vs. Ensembl Medaka
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:101161636]) HSP 1 Score: 304.294 bits (778), Expect = 4.153e-105 Identity = 157/217 (72.35%), Postives = 193/217 (88.94%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSK+S+DTL E V VL+ S+ KPRKFTE++ELQI+LKNYDPQKDKRF+G+V+L+ +PRPK +CVLGDQQH DEA A ++P MD+E+LKKLNK+KK++KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL KVD++KSTIKFQMKKVLCL VAVG+VKMT++EL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 1 MSKVSRDTLYEAVKEVLQGSV-AKPRKFTESVELQISLKNYDPQKDKRFSGTVRLKTLPRPKFSVCVLGDQQHCDEAKAADMPHMDIEALKKLNKNKKMVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
BLAST of 60S ribosomal protein L10a vs. Ensembl Medaka
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:101161636]) HSP 1 Score: 299.671 bits (766), Expect = 6.374e-103 Identity = 155/215 (72.09%), Postives = 191/215 (88.84%), Query Frame = 2 Query: 71 KISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 K+S+DTL E V VL+ S+ KPRKFTE++ELQI+LKNYDPQKDKRF+G+V+L+ +PRPK +CVLGDQQH DEA A ++P MD+E+LKKLNK+KK++KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL KVD++KSTIKFQMKKVLCL VAVG+VKMT++EL NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY Sbjct: 26 KVSRDTLYEAVKEVLQGSV-AKPRKFTESVELQISLKNYDPQKDKRFSGTVRLKTLPRPKFSVCVLGDQQHCDEAKAADMPHMDIEALKKLNKNKKMVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 239
BLAST of 60S ribosomal protein L10a vs. Planmine SMEST
Match: SMESG000027088.1 (SMESG000027088.1) HSP 1 Score: 405.601 bits (1041), Expect = 2.276e-145 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY Sbjct: 1 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 217
BLAST of 60S ribosomal protein L10a vs. Planmine SMEST
Match: SMESG000025746.1 (SMESG000025746.1) HSP 1 Score: 399.053 bits (1024), Expect = 1.011e-142 Identity = 213/217 (98.16%), Postives = 215/217 (99.08%), Query Frame = 2 Query: 65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MSKISKDTLNET+ASVLK SLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKM+ EELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY Sbjct: 1 MSKISKDTLNETIASVLKHSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMSHEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 217
BLAST of 60S ribosomal protein L10a vs. Planmine SMEST
Match: SMESG000025746.1 (SMESG000025746.1) HSP 1 Score: 276.944 bits (707), Expect = 2.010e-95 Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 2 Query: 251 MKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 MKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKM+ EELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY Sbjct: 1 MKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMSHEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 155
BLAST of 60S ribosomal protein L10a vs. Planmine SMEST
Match: SMESG000022929.1 (SMESG000022929.1) HSP 1 Score: 67.781 bits (164), Expect = 1.536e-13 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 446 LNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715 +N GKFP+ IS + + D + F ++ V+CL + VGN M+ EE+ +NIS+ INF+ S K GW+++ ++IK S E RLY Sbjct: 124 INTYGKFPIRISLQK---ENCDCDEPICFFIVENVICLSICVGNTIMSAEEIFKNISLVINFITSHSKNGWESICDMFIKMSDQETVRLY 210 The following BLAST results are available for this feature:
BLAST of 60S ribosomal protein L10a vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 1
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of 60S ribosomal protein L10a vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of 60S ribosomal protein L10a vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of 60S ribosomal protein L10a vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 3
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of 60S ribosomal protein L10a vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of 60S ribosomal protein L10a vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of 60S ribosomal protein L10a vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 2
BLAST of 60S ribosomal protein L10a vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of 60S ribosomal protein L10a vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of 60S ribosomal protein L10a vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 4
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000240 ID=SMED30000240|Name=60S ribosomal protein L10a|organism=Schmidtea mediterranea sexual|type=transcript|length=764bpback to top protein sequence of SMED30000240-orf-1 >SMED30000240-orf-1 ID=SMED30000240-orf-1|Name=SMED30000240-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=218bp MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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