60S ribosomal protein L10a

Overview
Name60S ribosomal protein L10a
Smed IDSMED30000240
Length (bp)764
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 60S ribosomal protein L10a (SMED30000240) t-SNE clustered cells

Violin plots show distribution of expression levels for 60S ribosomal protein L10a (SMED30000240) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 60S ribosomal protein L10a (SMED30000240) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 60S ribosomal protein L10a (SMED30000240) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30000240

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 13

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30000240h1SMcG0018997 SmedASXL_004577SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30000240h1SMcG0018997 Contig42342newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30000240h1SMcG0018997 Contig42342uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
pharynxSMED30000240h1SMcG0018997 dd_Smed_v4_350_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30000240h1SMcG0018997 dd_Smed_v4_350_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30000240h1SMcG0018997 dd_Smed_v4_350_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30000240h1SMcG0018997 dd_Smed_v4_350_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30000240h1SMcG0018997 dd_Smed_v4_350_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30000240h1SMcG0018997 dd_Smed_v4_350_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30000240h1SMcG0018997 dd_Smed_v4_350_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30000240h1SMcG0018997 dd_Smed_v4_350_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30000240h1SMcG0018997 dd_Smed_v4_350_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30000240h1SMcG0018997 dd_Smed_v6_350_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Human
Match: RPL10A (ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299])

HSP 1 Score: 294.664 bits (753), Expect = 4.753e-101
Identity = 156/216 (72.22%), Postives = 189/216 (87.50%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            SK+S+DTL E V  VL  + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Match: rpl-1 (60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4])

HSP 1 Score: 297.36 bits (760), Expect = 1.228e-102
Identity = 156/217 (71.89%), Postives = 189/217 (87.10%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+S+++LNE +A VLK S E KPRKF ETIELQI LKNYDPQKDKRF+GS++L++IPRP MK+CV GDQ H+DEA A +IPSM  + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L  K D++++T+KFQMKKVLCL VAVG+V +TQEEL  NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y
Sbjct:    1 MSKVSRESLNEAIAEVLKGSSE-KPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPRPNMKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Match: rpl-1 (60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4])

HSP 1 Score: 297.36 bits (760), Expect = 1.228e-102
Identity = 156/217 (71.89%), Postives = 189/217 (87.10%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+S+++LNE +A VLK S E KPRKF ETIELQI LKNYDPQKDKRF+GS++L++IPRP MK+CV GDQ H+DEA A +IPSM  + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L  K D++++T+KFQMKKVLCL VAVG+V +TQEEL  NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y
Sbjct:    1 MSKVSRESLNEAIAEVLKGSSE-KPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPRPNMKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Match: rpl-1 (60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4])

HSP 1 Score: 207.223 bits (526), Expect = 6.865e-68
Identity = 112/155 (72.26%), Postives = 135/155 (87.10%), Query Frame = 2 
Query:  251 MKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MK+CV GDQ H+DEA A +IPSM  + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L  K D++++T+KFQMKKVLCL VAVG+V +TQEEL  NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y
Sbjct:    1 MKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 155
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Match: rpl-1 (60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4])

HSP 1 Score: 207.223 bits (526), Expect = 6.865e-68
Identity = 112/155 (72.26%), Postives = 135/155 (87.10%), Query Frame = 2 
Query:  251 MKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MK+CV GDQ H+DEA A +IPSM  + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L  K D++++T+KFQMKKVLCL VAVG+V +TQEEL  NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y
Sbjct:    1 MKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 155
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Match: rpl-1 (60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4])

HSP 1 Score: 207.223 bits (526), Expect = 6.865e-68
Identity = 112/155 (72.26%), Postives = 135/155 (87.10%), Query Frame = 2 
Query:  251 MKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MK+CV GDQ H+DEA A +IPSM  + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L  K D++++T+KFQMKKVLCL VAVG+V +TQEEL  NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y
Sbjct:    1 MKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 155
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Fly
Match: RpL10Ab (gene:FBgn0036213 transcript:FBtr0076032)

HSP 1 Score: 288.886 bits (738), Expect = 4.154e-99
Identity = 152/216 (70.37%), Postives = 189/216 (87.50%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            SK+S+DTL E V  +L+ S + K R F ET+ELQI LKNYDPQKDKRF+G+VKL++IPRPKMK+C+LGDQQH DEA ANN+  MD E+LKKLNK+KKL+KKLAK YDAFLAS+S+IKQIPR+LGPGLNKAGKFP ++SH E+++ K++++KSTIKFQMKKVLCL VAVG+V M  +EL+QN+++SINFLVSLLKK WQNVR+L++KSSMG  QRLY
Sbjct:    3 SKVSRDTLYEGVNGLLEASAKKK-RGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLKKNWQNVRSLHVKSSMGPPQRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Fly
Match: RpL10Aa (gene:FBgn0038281 transcript:FBtr0083024)

HSP 1 Score: 202.986 bits (515), Expect = 2.654e-65
Identity = 118/217 (54.38%), Postives = 160/217 (73.73%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            +SK+S+DT+   V ++L  + + K     ET+ELQI L++YDP K KRF+GSV L ++  P++K+CV GDQ+H  +A A  +  +DVE+LKKLNKD KL KKL+K YD FLAS+S+IKQIPR+LGPGL  AGKF   ++ GE++  K+  L ST K  MK++ CL V VG+V M  EEL++NI++SINFLVSLLK  WQNVR+L+IKSS+G   +LY
Sbjct:    2 VSKVSRDTIYVAVKNIL-LNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAVPQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQIPRLLGPGLTNAGKFLTPLARGESMSSKIKIL-STKKKHMKRMECLSVNVGHVGMHPEELARNIAISINFLVSLLKDNWQNVRSLHIKSSLGVPHQLY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Fly
Match: RpL10Ab (gene:FBgn0036213 transcript:FBtr0345073)

HSP 1 Score: 68.1662 bits (165), Expect = 5.143e-15
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVK 226
            SK+S+DTL E V  +L+ S + K R F ET+ELQI LKNYDPQKDKRF+G+VK
Sbjct:    3 SKVSRDTLYEGVNGLLEASAK-KKRGFLETVELQIGLKNYDPQKDKRFSGTVK 54
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Zebrafish
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:323305])

HSP 1 Score: 293.893 bits (751), Expect = 6.422e-101
Identity = 156/217 (71.89%), Postives = 186/217 (85.71%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+S+DTL E V  V   S   K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L+  PRPK  +CVLGDQQH DEA A  +P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL  KVD++KSTIKFQMKKVLCL VAVG+VKM++EEL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    1 MSKVSRDTLYEAVKEVQAGS-RRKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKAAELPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLGTKVDEVKSTIKFQMKKVLCLAVAVGHVKMSEEELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Zebrafish
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:323305])

HSP 1 Score: 227.639 bits (579), Expect = 1.144e-75
Identity = 121/163 (74.23%), Postives = 144/163 (88.34%), Query Frame = 2 
Query:  227 LRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            L+  PRPK  +CVLGDQQH DEA A  +P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL  KVD++KSTIKFQMKKVLCL VAVG+VKM++EEL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    2 LKTTPRPKFSVCVLGDQQHCDEAKAAELPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLGTKVDEVKSTIKFQMKKVLCLAVAVGHVKMSEEELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 164
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Zebrafish
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:323305])

HSP 1 Score: 69.707 bits (169), Expect = 2.365e-15
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKL 229
            MSK+S+DTL E V  V   S   K RKF ET+ELQI+LKNYDPQKDKRF+G+V+ 
Sbjct:    1 MSKVSRDTLYEAVKEVQAGSRRKK-RKFLETVELQISLKNYDPQKDKRFSGTVRF 54
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Xenopus
Match: dnajc6 (DnaJ heat shock protein family (Hsp40) member C6 [Source:Xenbase;Acc:XB-GENE-975869])

HSP 1 Score: 299.286 bits (765), Expect = 5.244e-103
Identity = 159/216 (73.61%), Postives = 191/216 (88.43%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            SK+S+DTL E V  VL+ S + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A ++P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENLV KVD++KSTIKFQMKKVLCL VAVG+VK+T+EEL  NI +SINFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    3 SKVSRDTLYEAVREVLQGS-KKKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Xenopus
Match: dnajc6 (DnaJ heat shock protein family (Hsp40) member C6 [Source:Xenbase;Acc:XB-GENE-975869])

HSP 1 Score: 299.671 bits (766), Expect = 2.410e-102
Identity = 162/228 (71.05%), Postives = 196/228 (85.96%), Query Frame = 2 
Query:   32 YFNYKLFKFCTMSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            YFN + +     SK+S+DTL E V  VL+ S + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A ++P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENLV KVD++KSTIKFQMKKVLCL VAVG+VK+T+EEL  NI +SINFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:   41 YFNIQFYS----SKVSRDTLYEAVREVLQGS-KKKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKKNWQNVRALYIKSTMGKPQRLY 263
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Xenopus
Match: dnajc6 (DnaJ heat shock protein family (Hsp40) member C6 [Source:Xenbase;Acc:XB-GENE-975869])

HSP 1 Score: 296.59 bits (758), Expect = 7.639e-102
Identity = 158/217 (72.81%), Postives = 190/217 (87.56%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            M  +S+DTL E V  VL+ S + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A ++P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENLV KVD++KSTIKFQMKKVLCL VAVG+VK+T+EEL  NI +SINFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    1 MVLVSRDTLYEAVREVLQGS-KKKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Match: Rpl10a (ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877])

HSP 1 Score: 296.975 bits (759), Expect = 4.259e-102
Identity = 157/217 (72.35%), Postives = 190/217 (87.56%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+S+DTL E V  VL  + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    1 MSKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Match: Rpl10a (ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877])

HSP 1 Score: 294.664 bits (753), Expect = 3.263e-101
Identity = 156/216 (72.22%), Postives = 189/216 (87.50%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            SK+S+DTL E V  VL  + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Match: Rpl10a (ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877])

HSP 1 Score: 235.728 bits (600), Expect = 2.589e-78
Identity = 135/216 (62.50%), Postives = 164/216 (75.93%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            SK+S+DTL E V  VL                       +  Q+ +R     KL++ PRPK  +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    3 SKVSRDTLYEAVREVL-----------------------HGNQRKRR-----KLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 190
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Match: Rpl10a (ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877])

HSP 1 Score: 182.956 bits (463), Expect = 5.964e-58
Identity = 100/186 (53.76%), Postives = 127/186 (68.28%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSI 625
            SK+S+DTL E V  VL  + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A +IP MD+E                       A   + K    +   GLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL  NI +++
Sbjct:    3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIE-----------------------ALKKLNKNKKLVKKLGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAV 164
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Match: Rpl10a (ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877])

HSP 1 Score: 120.939 bits (302), Expect = 2.520e-34
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVES 331
            SK+S+DTL E V  VL  + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A +IP MD+E+
Sbjct:    3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEA 89
[Close]
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Match: sp|Q7ZYS8|RL10A_XENLA (60S ribosomal protein L10a OS=Xenopus laevis OX=8355 GN=rpl10a PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 3.857e-102
Identity = 159/216 (73.61%), Postives = 191/216 (88.43%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            SK+S+DTL E V  VL+ S + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A ++P MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENLV KVD++KSTIKFQMKKVLCL VAVG+VK+T+EEL  NI +SINFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    3 SKVSRDTLYEAVREVLQGS-KKKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSLCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Match: sp|Q9N4I4|RL10A_CAEEL (60S ribosomal protein L10a OS=Caenorhabditis elegans OX=6239 GN=rpl-1 PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 1.562e-101
Identity = 156/217 (71.89%), Postives = 189/217 (87.10%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+S+++LNE +A VLK S E KPRKF ETIELQI LKNYDPQKDKRF+GS++L++IPRP MK+CV GDQ H+DEA A +IPSM  + LKKLNK KKLIKKLAK YDAF+AS+S+IKQIPRILGPGLNKAGKFP +++HGE+L  K D++++T+KFQMKKVLCL VAVG+V +TQEEL  NIS+SINFLVSLLKK WQNVR+L IKS+MG+ QR+Y
Sbjct:    1 MSKVSRESLNEAIAEVLKGSSE-KPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPRPNMKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Match: sp|Q90YV8|RL10A_ICTPU (60S ribosomal protein L10a OS=Ictalurus punctatus OX=7998 GN=rpl10a PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 1.276e-100
Identity = 155/217 (71.43%), Postives = 188/217 (86.64%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+S+DTL E V  V   S+ +K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L+  PRPK  +CVLGDQQH DEA A  IP MD+E+LKKLNK+KK++KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL  KVD++KSTIKFQMKKVLCL VAVG+V+M+++EL  NI +++NFLVSLLKK WQNVRALYIKSSMG+ QRLY
Sbjct:    1 MSKVSRDTLYEAVREVQAGSI-SKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKAAEIPHMDIEALKKLNKNKKMVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVRMSEDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSSMGKPQRLY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Match: sp|P62907|RL10A_RAT (60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 2.282e-100
Identity = 156/216 (72.22%), Postives = 189/216 (87.50%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            SK+S+DTL E V  VL  + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Match: sp|P62906|RL10A_HUMAN (60S ribosomal protein L10a OS=Homo sapiens OX=9606 GN=RPL10A PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 2.282e-100
Identity = 156/216 (72.22%), Postives = 189/216 (87.50%), Query Frame = 2 
Query:   68 SKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            SK+S+DTL E V  VL  + + K RKF ET+ELQI+LKNYDPQKDKRF+G+V+L++ PRPK  +CVLGDQQH DEA A +IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+V KVD++KSTIKFQMKKVLCL VAVG+VKMT +EL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    3 SKVSRDTLYEAVREVLHGN-QRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Match: T1G5H8 (Ribosomal protein OS=Helobdella robusta OX=6412 GN=20216325 PE=3 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 5.896e-105
Identity = 164/217 (75.58%), Postives = 196/217 (90.32%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
             SKIS+D+L E+VA++L +S E K RKFTET+ELQI+LKNYDPQKDKRF+G+VKLRNIPRPKM ICVLGDQQH DEA AN++  MD E+LKKLNK+KKLIKKLAK+YDAFLASDS+IKQIPRI+GPGLNKAGKFP M++HGE++  K++++K+TIKFQMKKVLCL VAVGNV MTQ+EL  NI+++INFLVSLLKK WQNVR+LYIKS+MG VQRLY
Sbjct:   17 FSKISRDSLAESVAALLTYSQEKK-RKFTETVELQISLKNYDPQKDKRFSGTVKLRNIPRPKMAICVLGDQQHCDEAKANSVECMDAEALKKLNKNKKLIKKLAKKYDAFLASDSLIKQIPRIVGPGLNKAGKFPSMLTHGESMTGKIEEVKATIKFQMKKVLCLSVAVGNVNMTQDELVSNITMAINFLVSLLKKNWQNVRSLYIKSTMGPVQRLY 232
[Close]
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Match: B0Z9L5 (Ribosomal protein OS=Lineus viridis OX=56195 PE=2 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.056e-103
Identity = 158/217 (72.81%), Postives = 194/217 (89.40%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+S++TLNE V+++L +S ETK RKFTE++ELQI+LKNYDPQKDKRF G+VKL+NIPRPK+KICVLGDQQH DEA AN +P+MDVE+LKKLNK+KKL+KKLAK+YD FLASDS+IKQIPRILGPGLNKAGKFP ++SH E +V K+++ K+TIKFQMKKVLCL  AVG+V+MTQ+EL  N  ++INFLVSLLKK WQNV+ALY+KS+MG  QR+Y
Sbjct:    1 MSKLSRETLNEAVSAILAYSTETKKRKFTESVELQISLKNYDPQKDKRFTGTVKLKNIPRPKLKICVLGDQQHCDEAKANELPNMDVEALKKLNKNKKLVKKLAKKYDGFLASDSLIKQIPRILGPGLNKAGKFPSVLSHNEAMVAKIEESKATIKFQMKKVLCLSAAVGHVQMTQDELVANCILAINFLVSLLKKNWQNVKALYVKSTMGPPQRIY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Match: F1LDI6 (Ribosomal protein OS=Ascaris suum OX=6253 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.194e-103
Identity = 163/217 (75.12%), Postives = 191/217 (88.02%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSKI +DTL E V  VLK S E K RKF ET+ELQ+ALKNYDPQKDKRF+GSV+L+N+PRPKMK+C+LGDQQH DEANANNIP M+ E LKKLNK+KKLIKKLAK YDAFLAS+++IKQIPRILGPGLNKAGKFP +++H E L  KV++++STIKFQMKKVLCL VAVG+V+MTQ+EL  NIS+SINFLVSLLKK WQNVR+L+IKS+MG  QRLY
Sbjct:    1 MSKIPRDTLIECVGEVLKASQEKK-RKFRETVELQVALKNYDPQKDKRFSGSVRLKNVPRPKMKVCILGDQQHCDEANANNIPCMNAEDLKKLNKNKKLIKKLAKSYDAFLASEALIKQIPRILGPGLNKAGKFPTVVAHSEPLAAKVEEIRSTIKFQMKKVLCLSVAVGHVEMTQDELVSNISLSINFLVSLLKKSWQNVRSLHIKSTMGPPQRLY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Match: A0A0N4VPE1 (Ribosomal protein OS=Enterobius vermicularis OX=51028 GN=EVEC_LOCUS12036 PE=3 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.316e-103
Identity = 160/221 (72.40%), Postives = 195/221 (88.24%), Query Frame = 2 
Query:   53 KFCTMSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            +F  MSKIS+DTL+E ++ VLK+S E K RKF ET+ELQ+ALKNYDPQKDKRF+GSV+L+ +PRPKMK+C+LGDQQH DEAN NNIP M+ E LKKLNK+KKLIKKLAK YDAFLAS+++IKQIPRILGPGLNKAGKFP ++SH E L  KV++++STIKFQMKKVLCL VAVG+V+MT+ EL+QNIS+S+NFLVSLLKK WQN+R++ IKS+MG  QRLY
Sbjct:    3 RFEKMSKISRDTLHECISEVLKYSQEKK-RKFRETVELQVALKNYDPQKDKRFSGSVRLKTVPRPKMKVCILGDQQHCDEANNNNIPCMNAEDLKKLNKNKKLIKKLAKGYDAFLASEALIKQIPRILGPGLNKAGKFPTVVSHSEPLAAKVEEIRSTIKFQMKKVLCLSVAVGHVEMTEAELAQNISLSVNFLVSLLKKNWQNIRSINIKSTMGPAQRLY 222
[Close]
BLAST of 60S ribosomal protein L10a vs. TrEMBL
Match: A0A0B2VN18 (Ribosomal protein OS=Toxocara canis OX=6265 GN=rpl-10a PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.474e-103
Identity = 160/217 (73.73%), Postives = 192/217 (88.48%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+ +DTL E V  VLKFS E K RKF ET+ELQ+ALKNYDPQKDKRF+GSV+L+N+PRPKMK+C+LGDQQH DEANANNIP M+ E LKKLNK+KKLIKKLAK YDAFLAS+++IKQIPRILGPGLNKAGKFP +++H E L  KV++++STIKFQMKKVLCL VAVG+V+M+Q+EL  NI++SINFLVSLLKK WQNVR+L++KS+MG  QRLY
Sbjct:    1 MSKVPRDTLIECVGEVLKFSQEKK-RKFRETVELQVALKNYDPQKDKRFSGSVRLKNVPRPKMKVCILGDQQHCDEANANNIPCMNAEDLKKLNKNKKLIKKLAKSYDAFLASEALIKQIPRILGPGLNKAGKFPTVVAHSEPLAAKVEEIRSTIKFQMKKVLCLSVAVGHVEMSQDELVSNIALSINFLVSLLKKSWQNVRSLHVKSTMGPPQRLY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Cavefish
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:103045470])

HSP 1 Score: 291.582 bits (745), Expect = 4.543e-100
Identity = 154/217 (70.97%), Postives = 187/217 (86.18%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+S+DTL E V  V   S+  K +KF ET+ELQI+LKNYDPQKDKRF+G+V+L+  PRPK  +CVLGDQQH DEA A  IP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL  KVD++KSTIKFQMKKVLCL VAVG+V+M+++EL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    1 MSKVSRDTLYEAVREVQSGSI-AKRKKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKAAEIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVRMSEDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Sea Lamprey
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:323305])

HSP 1 Score: 295.819 bits (756), Expect = 1.700e-102
Identity = 154/217 (70.97%), Postives = 189/217 (87.10%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+S+DTL+E V  +L  S + + R F ET+ELQI+LKNYDPQKDKRF+G+V+L+N PRPK  +C+LGDQQH DEA A NIP MD+E+LKKLNK+KKL+KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H EN+  KVD++KSTIKFQMKKVLCL VAVG+VKMT++EL  N+ ++INFLVSLLKK WQNVRALY+KS+MG  QRLY
Sbjct:    1 MSKVSRDTLHEAVRELLLGSQKNRKR-FRETVELQISLKNYDPQKDKRFSGTVRLKNTPRPKFSVCLLGDQQHCDEAEAANIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMASKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVSNLHLAINFLVSLLKKNWQNVRALYLKSTMGRPQRLY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Yeast
Match: RPL1A (Ribosomal 60S subunit protein L1A; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1A has a paralog, RPL1B, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal [Source:SGD;Acc:S000006141])

HSP 1 Score: 239.195 bits (609), Expect = 2.163e-80
Identity = 130/217 (59.91%), Postives = 168/217 (77.42%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSKI+   + E V  +LK+S ETK R F ET+ELQ+ LKNYDPQ+DKRF+GS+KL N PRP M IC+ GD   +D A +  + +M V+ LKKLNK+KKLIKKL+K+Y+AF+AS+ +IKQ+PR+LGP L+KAGKFP  +SH ++L  KV D++STIKFQ+KKVLCL VAVGNV+M ++ L   I +S+NF VSLLKK WQNV +L +KSSMG   RLY
Sbjct:    1 MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Yeast
Match: RPL1B (Ribosomal 60S subunit protein L1B; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1B has a paralog, RPL1A, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal [Source:SGD;Acc:S000003103])

HSP 1 Score: 239.195 bits (609), Expect = 2.163e-80
Identity = 130/217 (59.91%), Postives = 168/217 (77.42%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSKI+   + E V  +LK+S ETK R F ET+ELQ+ LKNYDPQ+DKRF+GS+KL N PRP M IC+ GD   +D A +  + +M V+ LKKLNK+KKLIKKL+K+Y+AF+AS+ +IKQ+PR+LGP L+KAGKFP  +SH ++L  KV D++STIKFQ+KKVLCL VAVGNV+M ++ L   I +S+NF VSLLKK WQNV +L +KSSMG   RLY
Sbjct:    1 MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Nematostella
Match: EDO48328 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJT6])

HSP 1 Score: 54.6842 bits (130), Expect = 5.092e-9
Identity = 28/104 (26.92%), Postives = 55/104 (52.88%), Query Frame = 2 
Query:  383 YDAFLASDSVIKQIPRILGPGLNKAGKFPVMIS-HGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSS 691
            YD FL  D++   +PR+LG       KFP+ ++    NL  +++    +    +    C  + VG+    ++E+  NI  +++ L  ++ +GW N+++L IK+S
Sbjct:  111 YDIFLCDDAIYHLLPRVLGKAFFAKKKFPLPVNLKKTNLQGEINKALQSTYISLGHGSCSAMKVGHTGQEKKEVISNIVEAVSGLAKIIPRGWNNIQSLNIKTS 214
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Medaka
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:101161636])

HSP 1 Score: 304.294 bits (778), Expect = 4.153e-105
Identity = 157/217 (72.35%), Postives = 193/217 (88.94%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSK+S+DTL E V  VL+ S+  KPRKFTE++ELQI+LKNYDPQKDKRF+G+V+L+ +PRPK  +CVLGDQQH DEA A ++P MD+E+LKKLNK+KK++KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL  KVD++KSTIKFQMKKVLCL VAVG+VKMT++EL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:    1 MSKVSRDTLYEAVKEVLQGSV-AKPRKFTESVELQISLKNYDPQKDKRFSGTVRLKTLPRPKFSVCVLGDQQHCDEAKAADMPHMDIEALKKLNKNKKMVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
[Close]
BLAST of 60S ribosomal protein L10a vs. Ensembl Medaka
Match: rpl10a (ribosomal protein L10a [Source:NCBI gene;Acc:101161636])

HSP 1 Score: 299.671 bits (766), Expect = 6.374e-103
Identity = 155/215 (72.09%), Postives = 191/215 (88.84%), Query Frame = 2 
Query:   71 KISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            K+S+DTL E V  VL+ S+  KPRKFTE++ELQI+LKNYDPQKDKRF+G+V+L+ +PRPK  +CVLGDQQH DEA A ++P MD+E+LKKLNK+KK++KKLAK+YDAFLAS+S+IKQIPRILGPGLNKAGKFP +++H ENL  KVD++KSTIKFQMKKVLCL VAVG+VKMT++EL  NI +++NFLVSLLKK WQNVRALYIKS+MG+ QRLY
Sbjct:   26 KVSRDTLYEAVKEVLQGSV-AKPRKFTESVELQISLKNYDPQKDKRFSGTVRLKTLPRPKFSVCVLGDQQHCDEAKAADMPHMDIEALKKLNKNKKMVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 239
[Close]
BLAST of 60S ribosomal protein L10a vs. Planmine SMEST
Match: SMESG000027088.1 (SMESG000027088.1)

HSP 1 Score: 405.601 bits (1041), Expect = 2.276e-145
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY
Sbjct:    1 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. Planmine SMEST
Match: SMESG000025746.1 (SMESG000025746.1)

HSP 1 Score: 399.053 bits (1024), Expect = 1.011e-142
Identity = 213/217 (98.16%), Postives = 215/217 (99.08%), Query Frame = 2 
Query:   65 MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MSKISKDTLNET+ASVLK SLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKM+ EELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY
Sbjct:    1 MSKISKDTLNETIASVLKHSLETKPRKFTETIELQIALKNYDPQKDKRFNGSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMSHEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 217
[Close]
BLAST of 60S ribosomal protein L10a vs. Planmine SMEST
Match: SMESG000025746.1 (SMESG000025746.1)

HSP 1 Score: 276.944 bits (707), Expect = 2.010e-95
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 2 
Query:  251 MKICVLGDQQHIDEANANNIPSMDVESXXXXXXXXXXXXXXXXRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            MKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKM+ EELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY
Sbjct:    1 MKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLIKKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMSHEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 155
[Close]
BLAST of 60S ribosomal protein L10a vs. Planmine SMEST
Match: SMESG000022929.1 (SMESG000022929.1)

HSP 1 Score: 67.781 bits (164), Expect = 1.536e-13
Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 2 
Query:  446 LNKAGKFPVMISHGENLVQKVDDLKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQNVRALYIKSSMGEVQRLY 715
            +N  GKFP+ IS  +   +  D  +    F ++ V+CL + VGN  M+ EE+ +NIS+ INF+ S  K GW+++  ++IK S  E  RLY
Sbjct:  124 INTYGKFPIRISLQK---ENCDCDEPICFFIVENVICLSICVGNTIMSAEEIFKNISLVINFITSHSKNGWESICDMFIKMSDQETVRLY 210
The following BLAST results are available for this feature:
BLAST of 60S ribosomal protein L10a vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 1
Match NameE-valueIdentityDescription
RPL10A4.753e-10172.22ribosomal protein L10a [Source:HGNC Symbol;Acc:HGN... [more]
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BLAST of 60S ribosomal protein L10a vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rpl-11.228e-10271.8960S ribosomal protein L10a [Source:UniProtKB/Swis... [more]
rpl-11.228e-10271.8960S ribosomal protein L10a [Source:UniProtKB/Swis... [more]
rpl-16.865e-6872.2660S ribosomal protein L10a [Source:UniProtKB/Swis... [more]
rpl-16.865e-6872.2660S ribosomal protein L10a [Source:UniProtKB/Swis... [more]
rpl-16.865e-6872.2660S ribosomal protein L10a [Source:UniProtKB/Swis... [more]
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BLAST of 60S ribosomal protein L10a vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
RpL10Ab4.154e-9970.37gene:FBgn0036213 transcript:FBtr0076032[more]
RpL10Aa2.654e-6554.38gene:FBgn0038281 transcript:FBtr0083024[more]
RpL10Ab5.143e-1564.15gene:FBgn0036213 transcript:FBtr0345073[more]
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BLAST of 60S ribosomal protein L10a vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rpl10a6.422e-10171.89ribosomal protein L10a [Source:NCBI gene;Acc:32330... [more]
rpl10a1.144e-7574.23ribosomal protein L10a [Source:NCBI gene;Acc:32330... [more]
rpl10a2.365e-1563.64ribosomal protein L10a [Source:NCBI gene;Acc:32330... [more]
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BLAST of 60S ribosomal protein L10a vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
dnajc65.244e-10373.61DnaJ heat shock protein family (Hsp40) member C6 [... [more]
dnajc62.410e-10271.05DnaJ heat shock protein family (Hsp40) member C6 [... [more]
dnajc67.639e-10272.81DnaJ heat shock protein family (Hsp40) member C6 [... [more]
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BLAST of 60S ribosomal protein L10a vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rpl10a4.259e-10272.35ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:... [more]
Rpl10a3.263e-10172.22ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:... [more]
Rpl10a2.589e-7862.50ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:... [more]
Rpl10a5.964e-5853.76ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:... [more]
Rpl10a2.520e-3463.64ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:... [more]
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BLAST of 60S ribosomal protein L10a vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q7ZYS8|RL10A_XENLA3.857e-10273.6160S ribosomal protein L10a OS=Xenopus laevis OX=83... [more]
sp|Q9N4I4|RL10A_CAEEL1.562e-10171.8960S ribosomal protein L10a OS=Caenorhabditis elega... [more]
sp|Q90YV8|RL10A_ICTPU1.276e-10071.4360S ribosomal protein L10a OS=Ictalurus punctatus ... [more]
sp|P62907|RL10A_RAT2.282e-10072.2260S ribosomal protein L10a OS=Rattus norvegicus OX... [more]
sp|P62906|RL10A_HUMAN2.282e-10072.2260S ribosomal protein L10a OS=Homo sapiens OX=9606... [more]
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BLAST of 60S ribosomal protein L10a vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
T1G5H85.896e-10575.58Ribosomal protein OS=Helobdella robusta OX=6412 GN... [more]
B0Z9L51.056e-10372.81Ribosomal protein OS=Lineus viridis OX=56195 PE=2 ... [more]
F1LDI62.194e-10375.12Ribosomal protein OS=Ascaris suum OX=6253 PE=2 SV=... [more]
A0A0N4VPE12.316e-10372.40Ribosomal protein OS=Enterobius vermicularis OX=51... [more]
A0A0B2VN183.474e-10373.73Ribosomal protein OS=Toxocara canis OX=6265 GN=rpl... [more]
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BLAST of 60S ribosomal protein L10a vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rpl10a4.543e-10070.97ribosomal protein L10a [Source:NCBI gene;Acc:10304... [more]
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BLAST of 60S ribosomal protein L10a vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rpl10a1.700e-10270.97ribosomal protein L10a [Source:NCBI gene;Acc:32330... [more]
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BLAST of 60S ribosomal protein L10a vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
RPL1A2.163e-8059.91Ribosomal 60S subunit protein L1A; N-terminally ac... [more]
RPL1B2.163e-8059.91Ribosomal 60S subunit protein L1B; N-terminally ac... [more]
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BLAST of 60S ribosomal protein L10a vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO483285.092e-926.92Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 60S ribosomal protein L10a vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rpl10a4.153e-10572.35ribosomal protein L10a [Source:NCBI gene;Acc:10116... [more]
rpl10a6.374e-10372.09ribosomal protein L10a [Source:NCBI gene;Acc:10116... [more]
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BLAST of 60S ribosomal protein L10a vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000027088.12.276e-145100.00SMESG000027088.1[more]
SMESG000025746.11.011e-14298.16SMESG000025746.1[more]
SMESG000025746.12.010e-9598.71SMESG000025746.1[more]
SMESG000022929.11.536e-1338.89SMESG000022929.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30000240 ID=SMED30000240|Name=60S ribosomal protein L10a|organism=Schmidtea mediterranea sexual|type=transcript|length=764bp
ATAAAAACAATGCTTGTTTGAATTATATCATTATTTTAATTACAAACTTT
TTAAATTTTGCACTATGAGTAAAATATCTAAAGATACTCTAAACGAAACA
GTTGCTAGCGTTTTAAAGTTCTCTCTTGAGACTAAACCAAGGAAGTTCAC
TGAAACAATTGAATTACAAATTGCATTGAAAAACTATGATCCTCAAAAGG
ACAAGCGTTTCAATGGTTCAGTAAAGTTGAGAAATATTCCGAGACCAAAA
ATGAAAATTTGTGTTCTTGGTGACCAACAACATATCGATGAAGCTAATGC
TAACAACATCCCATCAATGGATGTTGAATCGCTAAAGAAATTGAACAAAG
ATAAAAAATTGATCAAGAAATTAGCTAAACGATATGATGCATTCTTGGCC
TCAGATTCAGTAATTAAACAAATTCCTAGAATTTTGGGTCCAGGTTTGAA
TAAGGCTGGTAAGTTTCCAGTAATGATCTCTCACGGAGAAAATTTGGTGC
AAAAAGTTGACGATTTAAAGAGCACTATCAAATTTCAAATGAAGAAAGTT
TTGTGCTTAGGAGTTGCAGTTGGAAACGTTAAAATGACTCAAGAAGAATT
GTCACAAAATATTTCGGTATCAATCAATTTCTTGGTTTCACTTTTAAAGA
AAGGATGGCAAAACGTTAGAGCGCTGTACATTAAATCATCTATGGGTGAA
GTTCAAAGATTGTACTAAGCTTTTGAATAAATAATTTCTGGATTTTTCAA
AAAAAAGATCGGAA
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protein sequence of SMED30000240-orf-1

>SMED30000240-orf-1 ID=SMED30000240-orf-1|Name=SMED30000240-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=218bp
MSKISKDTLNETVASVLKFSLETKPRKFTETIELQIALKNYDPQKDKRFN
GSVKLRNIPRPKMKICVLGDQQHIDEANANNIPSMDVESLKKLNKDKKLI
KKLAKRYDAFLASDSVIKQIPRILGPGLNKAGKFPVMISHGENLVQKVDD
LKSTIKFQMKKVLCLGVAVGNVKMTQEELSQNISVSINFLVSLLKKGWQN
VRALYIKSSMGEVQRLY*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000429neoblast
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR016095Ribosomal_L1_3-a/b-sand
IPR016094Ribosomal_L1_2-a/b-sand
IPR002143Ribosomal_L1
IPR028364Ribosomal_L1/biogenesis
IPR023674Ribosomal_L1-like
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Vocabulary: biological process
TermDefinition
GO:0006412translation
Vocabulary: cellular component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005840ribosome
GO:0030529intracellular ribonucleoprotein complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3DG3DSA:3.40.50.790coord: 63..152
e-value: 1.8E-66
score: 225.4
NoneNo IPR availableGENE3DG3DSA:3.30.190.20coord: 23..211
e-value: 1.8E-66
score: 225.4
NoneNo IPR availablePANTHERPTHR23105:SF101RIBOSOMAL PROTEINcoord: 3..216
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 3..216
IPR002143Ribosomal protein L1PIRSFPIRSF002155RPL1p_RPL1a_RPL10e_RPL1ocoord: 1..217
e-value: 2.4E-46
score: 155.6
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 22..211
e-value: 9.7E-45
score: 152.8
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinCDDcd00403Ribosomal_L1coord: 9..216
e-value: 2.24245E-59
score: 183.539
IPR023674Ribosomal protein L1-likeSUPERFAMILYSSF56808Ribosomal protein L1coord: 12..217