HTH CENPB-type domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Homology
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: JRKL (JRK like [Source:HGNC Symbol;Acc:HGNC:6200]) HSP 1 Score: 108.612 bits (270), Expect = 2.291e-40 Identity = 73/209 (34.93%), Postives = 109/209 (52.15%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKR--VKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 +KR+ + K+KL + +L++G QLA GI E+T+R + N+ KI + + D L KR +K + LD A+ +WF Q R +G PISGPI + E F + G D F S GWL RF +RH+ +I + E + D+ A + + F+E +Q+YN DE GL +K LP+R K G+K +RVT Sbjct: 5 RKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASS-SDSTSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL-GMDGDFNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETGLFWKCLPSRISVIK-GKCTVPGHKSIEERVT 210 HSP 2 Score: 79.337 bits (194), Expect = 2.291e-40 Identity = 51/144 (35.42%), Postives = 83/144 (57.64%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKIL----SVVIAR*KFRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNN 2718 ++ C N +G +KL+ ++GK+K PR F + ++LP Y + AW + ++F WF K FV VR +LR L+EKA+LL+DN P H +L + A K+ ++ IQP +QGVI+ K+NYR +++ + + N Sbjct: 211 IMCCANATGLHKLKLCVVGKAKKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFA--KYLPPNVASL-IQPSDQGVIATMKRNYRAGLLQNNLEEGN 351
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD2 (tigger transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:18333]) HSP 1 Score: 103.99 bits (258), Expect = 3.497e-37 Identity = 66/207 (31.88%), Postives = 112/207 (54.11%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGL-QVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRV 2297 +KR+ + K+KL + +L+ G +L+ GI EST+R K N+ +I + N + G+ + K +KS++ LD + +WF Q + +G+P+SG I Q + F + G + F AS+GWL RF +RH + G D+ AA + + F+E+ +Q+Y D+ GL +K LP+RTL +T + G + R+R+ Sbjct: 5 RKRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDAL-GMEGDFNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAAREFCGSFQEFVEKENLQPEQIYGADQTGLFWKCLPSRTLTLET-DQSTSGCRSSRERI 209 HSP 2 Score: 73.1738 bits (178), Expect = 3.497e-37 Identity = 50/142 (35.21%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR--*KFRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNN 2718 ++ C N +G +KL ++GK+K PR F ++ +LP Y + AW +VF WF K FV V+ HL+ L EKA+LL+D PA ++LS R K+ T++ IQP++QGV++ K+ YR +++ + + N Sbjct: 211 IMCCANATGLHKLNLCVVGKAKKPRAFKGTDLSNLPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPARPNEEMLSSDDGRIIVKYLPPNVTSL-IQPMSQGVLATVKRYYRAGLLQKYMDEGN 351
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD2 (tigger transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:18333]) HSP 1 Score: 103.99 bits (258), Expect = 3.497e-37 Identity = 66/207 (31.88%), Postives = 112/207 (54.11%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGL-QVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRV 2297 +KR+ + K+KL + +L+ G +L+ GI EST+R K N+ +I + N + G+ + K +KS++ LD + +WF Q + +G+P+SG I Q + F + G + F AS+GWL RF +RH + G D+ AA + + F+E+ +Q+Y D+ GL +K LP+RTL +T + G + R+R+ Sbjct: 5 RKRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDAL-GMEGDFNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAAREFCGSFQEFVEKENLQPEQIYGADQTGLFWKCLPSRTLTLET-DQSTSGCRSSRERI 209 HSP 2 Score: 73.1738 bits (178), Expect = 3.497e-37 Identity = 50/142 (35.21%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR--*KFRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNN 2718 ++ C N +G +KL ++GK+K PR F ++ +LP Y + AW +VF WF K FV V+ HL+ L EKA+LL+D PA ++LS R K+ T++ IQP++QGV++ K+ YR +++ + + N Sbjct: 211 IMCCANATGLHKLNLCVVGKAKKPRAFKGTDLSNLPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPARPNEEMLSSDDGRIIVKYLPPNVTSL-IQPMSQGVLATVKRYYRAGLLQKYMDEGN 351
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD5 (tigger transposable element derived 5 [Source:HGNC Symbol;Acc:HGNC:18336]) HSP 1 Score: 124.02 bits (310), Expect = 2.256e-36 Identity = 76/224 (33.93%), Postives = 113/224 (50.45%), Query Frame = 3 Query: 1686 RMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDK--------KAANSYP---------FWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKK--RRDRVT 2300 R ++S K+KL A++++K G+RQ + RD G+ TLRGW +E K+R L +G Q K+++ A++ +D A+Y WF+ R GVP+SGP+++AQ E F R I G + FKAS+GW R+ KRH S GE K + P EG Y +Q+Y+ GL +K+LP + + G + R DRVT Sbjct: 53 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVT 276 HSP 2 Score: 50.447 bits (119), Expect = 2.256e-36 Identity = 25/70 (35.71%), Postives = 36/70 (51.43%), Query Frame = 1 Query: 2281 RGETG*LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDV 2490 RG+ +L N +GS+KL+PL+IG+ P H N P Y S +AW + + WF + FV V Sbjct: 271 RGDRVTVLLAANLTGSHKLKPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGV 340
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD5 (tigger transposable element derived 5 [Source:HGNC Symbol;Acc:HGNC:18336]) HSP 1 Score: 124.02 bits (310), Expect = 2.256e-36 Identity = 76/224 (33.93%), Postives = 113/224 (50.45%), Query Frame = 3 Query: 1686 RMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDK--------KAANSYP---------FWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKK--RRDRVT 2300 R ++S K+KL A++++K G+RQ + RD G+ TLRGW +E K+R L +G Q K+++ A++ +D A+Y WF+ R GVP+SGP+++AQ E F R I G + FKAS+GW R+ KRH S GE K + P EG Y +Q+Y+ GL +K+LP + + G + R DRVT Sbjct: 53 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVT 276 HSP 2 Score: 50.447 bits (119), Expect = 2.256e-36 Identity = 25/70 (35.71%), Postives = 36/70 (51.43%), Query Frame = 1 Query: 2281 RGETG*LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDV 2490 RG+ +L N +GS+KL+PL+IG+ P H N P Y S +AW + + WF + FV V Sbjct: 271 RGDRVTVLLAANLTGSHKLKPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGV 340
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Celegans
Match: adpr-1 (ADiPose (Drosophila obesity gene) Related [Source:UniProtKB/TrEMBL;Acc:Q4W5Q8]) HSP 1 Score: 56.6102 bits (135), Expect = 7.327e-8 Identity = 49/192 (25.52%), Postives = 87/192 (45.31%), Query Frame = 1 Query: 73 TENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQ-IVSASKCGSIFLVDVN-STNKELNVFYKHSGPTLNIATFE-DEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSL---SAIAIHPLCSYKIAIGGSDSCVRVFDKRYLN 630 ++L+ F LEGH GCVNT+ W+K+G + SG DD ++I W ++ + + N+ + +F+ +Q +V+ + + L D+ ST K+ ++ G I T E D +A D FD R N ++ ++A+ I +G ++ VR++D+R LN Sbjct: 28 VDSLESFHMLEGHSGCVNTLRWNKTGALLASGSDDRNVKI------WKS---GREIHNLVTGHEGNVFAVEFLQNSGDQKLVTGAADRVVALHDIEASTCKK----WELDGRVKRICTVEHDPTLFWAAVECDNGVQQFDTRTENPEVIIRHTADREFHDAKSVAVSEARPNLIVVGFDETAVRLYDRRNLN 206
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Celegans
Match: eif-3.I (Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/Swiss-Prot;Acc:Q965S8]) HSP 1 Score: 48.1358 bits (113), Expect = 7.466e-7 Identity = 19/41 (46.34%), Postives = 28/41 (68.29%), Query Frame = 1 Query: 91 FEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDW 213 F + +GH G +NT+AW SGT I +GG+D +RI +F D+ Sbjct: 26 FARFKGHFGPINTMAWHPSGTIIATGGEDGYIRIQEFDEDY 66
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Fly
Match: adp (gene:FBgn0000057 transcript:FBtr0340288) HSP 1 Score: 82.8037 bits (203), Expect = 8.246e-16 Identity = 64/212 (30.19%), Postives = 95/212 (44.81%), Query Frame = 1 Query: 61 SASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGS-IFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESN------NIPFLKMNLPCSLS-----AIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFNSKFILC 660 S +Y + L+ L GH GCVN + W G + SG DD + I WD P+ K V+ I + N+ S KF+P NN IV+ I++ D+N N+ L H +AT +D F +A D DIRE + I +NL L +AI+P + +A+G +D RV+D+R L + + C Sbjct: 50 SPAYVDRLEQEAVLVGHEGCVNCLEWTTDGMWLASGSDDYRVMI------WD-PFRKKLVHVIRTKHLGNVFSVKFLPKTNNSIVATCAADKFIYVYDINDPNETLFSCICHFSRAKRLATAQDSPHVFWSAGEDGCILQLDIREPHRCRPEEGIGVRLLNLHDQLENTEAKCLAINPRRTEYLAVGTNDPFARVYDRRKLPSTNGNGLSAC 254
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Fly
Match: adp (gene:FBgn0000057 transcript:FBtr0086744) HSP 1 Score: 82.8037 bits (203), Expect = 8.246e-16 Identity = 64/212 (30.19%), Postives = 95/212 (44.81%), Query Frame = 1 Query: 61 SASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGS-IFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESN------NIPFLKMNLPCSLS-----AIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFNSKFILC 660 S +Y + L+ L GH GCVN + W G + SG DD + I WD P+ K V+ I + N+ S KF+P NN IV+ I++ D+N N+ L H +AT +D F +A D DIRE + I +NL L +AI+P + +A+G +D RV+D+R L + + C Sbjct: 50 SPAYVDRLEQEAVLVGHEGCVNCLEWTTDGMWLASGSDDYRVMI------WD-PFRKKLVHVIRTKHLGNVFSVKFLPKTNNSIVATCAADKFIYVYDINDPNETLFSCICHFSRAKRLATAQDSPHVFWSAGEDGCILQLDIREPHRCRPEEGIGVRLLNLHDQLENTEAKCLAINPRRTEYLAVGTNDPFARVYDRRKLPSTNGNGLSAC 254
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Fly
Match: CG8001 (gene:FBgn0035268 transcript:FBtr0072774) HSP 1 Score: 61.2326 bits (147), Expect = 5.099e-9 Identity = 61/227 (26.87%), Postives = 97/227 (42.73%), Query Frame = 1 Query: 16 WRFMNSRSKSSF---YHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKD-HVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNSTNKELNV--FYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPC-----------SLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 642 WR ++ S SSF Y+ S E + + L H GCVN++ ++++G I SG DD + + WD W K+ ++ ++ NI KF+ IVS+S+ G + + + + Y HS I +A D FD+R SN + + C L +IA HP + + GSD +RV+DKR L K+ + Sbjct: 292 WRGGHT-SASSFGQGYYGSRQVVEQMTLLSSLNVHHGCVNSLNFNRAGDLICSGSDDLTIVV------WD--WAKEKQLHRFRSGHNMNIFQTKFIDSAGCLDIVSSSRDGQVRRSVIPPSGGVIKPIRLYTHSESVHKIIVVPHSRHELMSAGEDAAVKHFDLRASNAATTM---MRCVYNDENERGRVRLFSIAHHPYAP-EFCVSGSDDILRVYDKRNLAKAIH 505
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Fly
Match: CG8001 (gene:FBgn0035268 transcript:FBtr0334073) HSP 1 Score: 61.2326 bits (147), Expect = 5.099e-9 Identity = 61/227 (26.87%), Postives = 97/227 (42.73%), Query Frame = 1 Query: 16 WRFMNSRSKSSF---YHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKD-HVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNSTNKELNV--FYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPC-----------SLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 642 WR ++ S SSF Y+ S E + + L H GCVN++ ++++G I SG DD + + WD W K+ ++ ++ NI KF+ IVS+S+ G + + + + Y HS I +A D FD+R SN + + C L +IA HP + + GSD +RV+DKR L K+ + Sbjct: 292 WRGGHT-SASSFGQGYYGSRQVVEQMTLLSSLNVHHGCVNSLNFNRAGDLICSGSDDLTIVV------WD--WAKEKQLHRFRSGHNMNIFQTKFIDSAGCLDIVSSSRDGQVRRSVIPPSGGVIKPIRLYTHSESVHKIIVVPHSRHELMSAGEDAAVKHFDLRASNAATTM---MRCVYNDENERGRVRLFSIAHHPYAP-EFCVSGSDDILRVYDKRNLAKAIH 505
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Fly
Match: CG8001 (gene:FBgn0035268 transcript:FBtr0334074) HSP 1 Score: 60.8474 bits (146), Expect = 5.535e-9 Identity = 61/227 (26.87%), Postives = 97/227 (42.73%), Query Frame = 1 Query: 16 WRFMNSRSKSSF---YHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKD-HVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNSTNKELNV--FYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPC-----------SLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 642 WR ++ S SSF Y+ S E + + L H GCVN++ ++++G I SG DD + + WD W K+ ++ ++ NI KF+ IVS+S+ G + + + + Y HS I +A D FD+R SN + + C L +IA HP + + GSD +RV+DKR L K+ + Sbjct: 287 WRGGHT-SASSFGQGYYGSRQVVEQMTLLSSLNVHHGCVNSLNFNRAGDLICSGSDDLTIVV------WD--WAKEKQLHRFRSGHNMNIFQTKFIDSAGCLDIVSSSRDGQVRRSVIPPSGGVIKPIRLYTHSESVHKIIVVPHSRHELMSAGEDAAVKHFDLRASNAATTM---MRCVYNDENERGRVRLFSIAHHPYAP-EFCVSGSDDILRVYDKRNLAKAIH 500
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Zebrafish
Match: dcaf6 (ddb1 and cul4 associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-090206-2]) HSP 1 Score: 91.2781 bits (225), Expect = 4.122e-18 Identity = 67/205 (32.68%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 70 YTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNSTNKELN---VFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFNSKFI 654 + + LK+ L H GCVNT++W+ +G ILSG DD L I P+ + I + NI SAKFMP N+ QIVS S G IF + +E+N F H G I T ++ + F + D T FD+R + + +N + ++I+I PL Y +A+G SDS VR++D+R L ++ Sbjct: 34 FVQRLKLEAVLNVHDGCVNTISWNDTGEYILSGSDDTNLVI-------TNPYNRKVKTTIRSGHRANIFSAKFMPHTNDQQIVSCSGDGIIFYTHTEKS-QEINRQCQFTCHYGTAYEIMTVPNDPYTFLSCGEDGTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISICPLVPYYLAVGCSDSSVRIYDRRMLGTRATGNYM 230
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Zebrafish
Match: dcaf8 (DDB1 and CUL4 associated factor 8 [Source:ZFIN;Acc:ZDB-GENE-070912-578]) HSP 1 Score: 77.411 bits (189), Expect = 5.191e-14 Identity = 59/230 (25.65%), Postives = 108/230 (46.96%), Query Frame = 1 Query: 16 WRFMNSRSKSSFYHDSASYT----------ENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVS-ASKCGSIFLVDVNSTNKELNV--FYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDI---RESNNIPFLKMN-LPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFNSKFI 654 WR + S DS + + L++ +LE H GCVNT+ ++ SGT++ SG DD LR+ + DW + + E + N+ AKF+P + ++ ++ G I + ++++T + N +H G +A D +F +A D D+ R +N + +K L I ++P ++ A+GG D VR++D+R +N+ N+ + Sbjct: 163 WRAIPSLRAREIGRDSQQFVRKVCGARGLVQRLELQGRLERHTGCVNTLHFNPSGTRLASGSDD--LRV--VIWDWAR---RKAELEFDSGHKSNVFQAKFLPHSGDSTLAMCARDGQIRVAELSATQRCKNTKRVAQHKGAAHKLALEPDSPCSFLSAGEDAVVFGIDLRLDRPANKLVVVKEGEKKVGLYTIYVNPANTHHFAVGGRDQYVRIYDQRKINEHDNNGVL 385
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Zebrafish
Match: dcaf8 (DDB1 and CUL4 associated factor 8 [Source:ZFIN;Acc:ZDB-GENE-070912-578]) HSP 1 Score: 77.411 bits (189), Expect = 5.191e-14 Identity = 59/230 (25.65%), Postives = 108/230 (46.96%), Query Frame = 1 Query: 16 WRFMNSRSKSSFYHDSASYT----------ENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVS-ASKCGSIFLVDVNSTNKELNV--FYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDI---RESNNIPFLKMN-LPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFNSKFI 654 WR + S DS + + L++ +LE H GCVNT+ ++ SGT++ SG DD LR+ + DW + + E + N+ AKF+P + ++ ++ G I + ++++T + N +H G +A D +F +A D D+ R +N + +K L I ++P ++ A+GG D VR++D+R +N+ N+ + Sbjct: 163 WRAIPSLRAREIGRDSQQFVRKVCGARGLVQRLELQGRLERHTGCVNTLHFNPSGTRLASGSDD--LRV--VIWDWAR---RKAELEFDSGHKSNVFQAKFLPHSGDSTLAMCARDGQIRVAELSATQRCKNTKRVAQHKGAAHKLALEPDSPCSFLSAGEDAVVFGIDLRLDRPANKLVVVKEGEKKVGLYTIYVNPANTHHFAVGGRDQYVRIYDQRKINEHDNNGVL 385
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Zebrafish
Match: wdtc1 (WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]) HSP 1 Score: 69.707 bits (169), Expect = 1.272e-11 Identity = 49/199 (24.62%), Postives = 95/199 (47.74%), Query Frame = 1 Query: 52 YHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLP------CSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLN 630 YH + + + L + +L+GH GCVN + W++ G + SG DD Q WD P+ + + ++ NI S KF+P +++I+ + V + + +++F H+ IAT F +A+ D +D+RES+ + ++L +A++P + +A+G + VR++D R ++ Sbjct: 33 YHVTDPFIKRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDD------QHAIIWD-PFRHSKLITMHTGHAANIFSVKFLPHSDDRILITGAADTKVHVHDVTAKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRESSKRSDVLIDLTEYCGQLVEAKCLAVNPRDNNYLAVGANGPFVRLYDIRMIH 224
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Match: apmapl (adipocyte plasma membrane associated protein LIKE [Source:Xenbase;Acc:XB-GENE-5754317]) HSP 1 Score: 126.716 bits (317), Expect = 8.273e-43 Identity = 60/154 (38.96%), Postives = 99/154 (64.29%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSG--EIRSTDKKAANSYP 2135 K+ +++S K+KL A++++KNG+RQ ++RD G+ TLRGW +E K+R + L +G K+++ A++ +D A+Y WF+ R +G+P+SGPI++AQ E F + I G++ FKAS+GW R+ KRH S + G E+R T+ +P Sbjct: 7 KQILTYSIKDKLEAIERVKNGERQASVSRDFGVPGGTLRGWLKDEQKLRWFLDQLGGDVGTHRKKMRLANEEEIDRAVYSWFISLRQQGIPLSGPIIQAQAEAFAKQIYGDECTFKASHGWFWRWQKRHGISSQRIYGESEVRQTEMDPVIIFP 160 HSP 2 Score: 69.707 bits (169), Expect = 8.273e-43 Identity = 55/168 (32.74%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 2230 IAPSQLRLPIINEKVIRRGETG*LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR*K-FRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNNGSVD 2730 I P Q P+ + G+ +L N +GS+KL+PL++GK + P H N P Y S NAW + +WF + FV V+ +L++ L++KA+LL++ P + L + S+ T +I ++QGVIS FKQ YRR ++K MV ++ D Sbjct: 158 IFPEQPNTPVADSGY---GDEVTVLLAANLTGSHKLKPLVVGKLRDPPSLRHHNQDKFPAVYHYSRNAWVTQELLREWFLEEFVPAVKRYLKRCCLQQKAVLLVNQCPGKPPEEDLQTADGNIRVLFLSKTTRSKIPSMDQGVISSFKQLYRRELLKLMVSCDSSPSD 322
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Match: kif6 (kinesin family member 6 [Source:Xenbase;Acc:XB-GENE-1014042]) HSP 1 Score: 83.5741 bits (205), Expect = 2.068e-27 Identity = 60/213 (28.17%), Postives = 107/213 (50.23%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSL------PNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 +KR+S S K+K+ L L+NG L GI ST+ K + K+ + P+++ D K + A + +D L +W Q R E P+S ++ AQ +KF+ L+N + + S+GW +F KR+ S + ++GE S + A+++ L + + +A+QVYN + L ++ LP + +AT G + ++R+T Sbjct: 182 RKRVSLSIKDKVTLLQDLENGASVKSLCDKYGIGTSTIYDLKKQKDKLLTFYSNSDAPDLMADR-----KTLHQAKNVSVDKVLMEWIRQRRRENFPLSRSLIMAQAKKFHVLLNI-STPCEYSSGWYGKFKKRNGLSILSINGEKASEEYNVADNFVKKLNKLVSDEHLSAEQVYNAAKASLFWRHLPQKLVAT-AQKPPSSGLEDPKERLT 387 HSP 2 Score: 60.8474 bits (146), Expect = 2.068e-27 Identity = 46/148 (31.08%), Postives = 74/148 (50.00%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXX--XXXXXXXXXXXXXXMDNYPAHHQRKIL------SVVIAR*KFRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNN 2718 +L C N +G++K R L+IGKS+ PR F V + P Y + A +F DWF FV + RA L + K +L++D+ P H + L +V + T IQP++QG++ +FK NY+ ++ M+ + N Sbjct: 388 VLACSNAAGTHKARLLVIGKSRNPRAFKGVRV--FPVTYTANKQAGITREIFQDWFENHFVPEARAHCMSVGLSQDAKVMLILDHCPTHPSAEFLVKDNVFAVCLP-------PDCTSFIQPLDQGILRLFKSNYKSEFLQRMLTECN 526
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000046714.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:KV460367.1:582927:585046:-1 gene:ENSXETG00000018570.1 transcript:ENSXETT00000046714.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 78.9518 bits (193), Expect = 3.672e-25 Identity = 69/199 (34.67%), Postives = 96/199 (48.24%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLK--NGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDN---VLDSALYQWFVQARFEGVPISGPILKAQGEKF-NRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAA-----NSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLA 2243 KKR S S +EK+ LD+ +G R LA++LGI STL +K R+ D G Q K+ K + + ++ L +WF VPISG +L+ + RL G D+ F ASNGW+DRF KR+ V GE +S D N P +L EG Y ++N DE GL + +LP +T Sbjct: 6 KKRKSLSLEEKIAILDRADSYHGTR-VALAKELGIPVSTLGTI----IKQRASTEGSADKCGPQAKKRKYVTQSKYEQMEKLLQEWFAGLHASNVPISGIMLREKAVHIATRL--GIDN-FTASNGWIDRFKKRYNVVYKAVCGESKSVDIDTVTNWKTNQLPCYL-----EG-YELKNIFNTDETGLFFNVLPGKTFC 190 HSP 2 Score: 58.151 bits (139), Expect = 3.672e-25 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFH 2469 +LF N GS KL+PL+IGKS PRCF +VN +LP +Y + AW T +F + H Sbjct: 208 VLFTTNADGSEKLKPLVIGKSVKPRCFKNVN--TLPTNYTANTKAWMTTKLFEEQMH 262
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:733780]) HSP 1 Score: 99.7525 bits (247), Expect = 1.745e-21 Identity = 68/205 (33.17%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 46 SFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNS---TNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLN 630 S Y + + LK+ L H GCVN+++W +G ILSG DD L I P+ K + I + NI SAKF+P+ N+ QI+S S G IF D+ TN++ F H G I T ++ + F + D T FD R + + +N + ++IAI P Y +A+G SDS VR++D+R L Sbjct: 27 SNYLGRREFVQRLKLEATLNIHDGCVNSISWGSTGEYILSGSDDTTLVITN-------PYNKKVLTRIRSGHRANIFSAKFLPLTNDKQIISCSGDGVIFFTDIEKDADTNRQCQ-FTCHYGTAYEIMTVPNDPYTFLSCGEDGTVRWFDTRTKTSCTKEDCKDDILINCRRAATSIAICPTAPYYLAVGCSDSSVRIYDRRMLG 223
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:733780]) HSP 1 Score: 99.7525 bits (247), Expect = 1.193e-20 Identity = 66/196 (33.67%), Postives = 98/196 (50.00%), Query Frame = 1 Query: 70 YTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNS---TNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYL 627 + + LK+ L H GCVN+++W +G ILSG DD L I P+ K + I + NI SAKF+P+ N+ QI+S S G IF D+ TN++ F H G I T ++ + F + D T FD R + + +N + ++IAI P Y +A+G SDS VR++D+R L Sbjct: 30 FVQRLKLEATLNIHDGCVNSISWGSTGEYILSGSDDTTLVI-------TNPYNKKVLTRIRSGHRANIFSAKFLPLTNDKQIISCSGDGVIFFTDIEKDADTNRQCQ-FTCHYGTAYEIMTVPNDPYTFLSCGEDGTVRWFDTRTKTSCTKEDCKDDILINCRRAATSIAICPTAPYYLAVGCSDSSVRIYDRRML 217
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Tigd5 (tigger transposable element derived 5 [Source:MGI Symbol;Acc:MGI:2145902]) HSP 1 Score: 142.895 bits (359), Expect = 8.103e-42 Identity = 81/224 (36.16%), Postives = 121/224 (54.02%), Query Frame = 3 Query: 1686 RMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAA----------------NSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRR---DRVT 2300 R ++S K+KL A++++K G+RQ + RD G+ TLRGW +E K+R + L +G Q K+++ A++ +D A+Y WF+ R GVP+SGP+++AQ E F R I G + FKAS+GW R+ KRH S + GE S A + P L EG Y +Q+YN + GL +++LP + T ++K G RR DRVT Sbjct: 63 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLDQLGGEVGTQRKKMRLANEEEIDRAVYSWFLTLRQHGVPLSGPVIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRIYGEAESPVAGPAPVKEEPAQSPGAVLVPDGAPATLPH--SEGGYGDEQIYNANVTGLYWRLLPEQASTPGTGDSKEPGGCSRRWRSDRVT 284 HSP 2 Score: 49.2914 bits (116), Expect = 8.103e-42 Identity = 23/64 (35.94%), Postives = 33/64 (51.56%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDV 2490 +L N +GS+KL+PL+IG+ P H N P Y S +AW + + WF + FV V Sbjct: 285 VLLAANLTGSHKLKPLVIGQLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGV 348
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Jrkl (Jrk-like [Source:MGI Symbol;Acc:MGI:1924782]) HSP 1 Score: 109.383 bits (272), Expect = 1.992e-40 Identity = 69/192 (35.94%), Postives = 104/192 (54.17%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKR--VKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATK 2249 +KR+ + K+KL + +L++G QLA GI E+T+R + N+ KI + + D L KR +K + LD A+ +WF Q R +G PISGPI + E F + G D F S GWL RF +RH+ +I + E + D+ A + + F+E+ +Q+YN DE GL +K LP+RT K Sbjct: 5 RKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASS-SDSTSLLAKRKSMKPSMYEELDKAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL-GMDGDFNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIEQENLQPEQIYNADETGLFWKCLPSRTTVIK 194 HSP 2 Score: 78.1814 bits (191), Expect = 1.992e-40 Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKIL----SVVIAR*KFRTSRKTTIEIQPINQGVISVFKQNYR 2682 ++ C N +G +KL+ ++GK++ PR F + ++LP Y + AW + ++F WF K FV VR +LR L+EKA+LL+DN P H +L + A K+ ++ IQP+ QGVI+ K+NYR Sbjct: 211 VMCCTNATGLHKLKLCVVGKARKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFA--KYLPPNVASL-IQPLGQGVIAAMKRNYR 339
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Tigd2 (tigger transposable element derived 2 [Source:MGI Symbol;Acc:MGI:1915390]) HSP 1 Score: 105.531 bits (262), Expect = 2.308e-38 Identity = 68/207 (32.85%), Postives = 111/207 (53.62%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGL-QVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRV 2297 +KR+ + K+KL + +L+ G +L+ GI EST+R K N+ +I + N + G+ + K +KS++ LD + +WF Q + +G+P+SG I Q F + G + F AS+GWL RF +RH + G D+ AA+ + + F+E +Q+Y D+ GL +K LP RTLA T + E Y+ R+R+ Sbjct: 5 RKRVVLTIKDKLDIIKKLEEGNSFKKLSVLYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQARFFFDAL-GMEGDFNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAASEFCGNFQEFVERENLLPEQIYGADQTGLFWKCLPTRTLAFDTDQSTCE-YRTSRERI 209 HSP 2 Score: 75.485 bits (184), Expect = 2.308e-38 Identity = 51/142 (35.92%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR--*KFRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNN 2718 ++ C N +GS+KL ++GK+K PR F ++ +LP Y + +AW +V WF K FV V+ HL+ L EKA+LL+D AH ++LS R K+ T++ IQP++QGV++ K+ YR +I+ + + N Sbjct: 211 IMCCANATGSHKLNLCVVGKAKRPRAFKGTDLSNLPVTYFSQKSAWIEPSVLKQWFEKCFVPQVQKHLKSKGLREKAVLLLDFPAAHPAEELLSSDDGRIIVKYLPPNVTSL-IQPMSQGVLTTVKRYYRAGLIQKYMDEGN 351
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Jrk (jerky [Source:MGI Symbol;Acc:MGI:106214]) HSP 1 Score: 92.4337 bits (228), Expect = 8.347e-32 Identity = 60/209 (28.71%), Postives = 107/209 (51.20%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKR-VKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLIN-GEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 +KR+ + KEK+ +L+ G+ + L ++ + STL K ++ ++ + L+ +R + + LD LY+WF+ R EG+P+SGP+L + + F + + E F S GWL RF RH ++ S E ++ D +AA + + + E + +QVY+ DE GL ++ LPN T + +K+ +DR+T Sbjct: 15 RKRVVLTLKEKIDICTRLERGESRKALMQEYNVGMSTLYDIKAHKAQLLRFFASSDSRQALEQRRTLHTPKLEHLDRVLYEWFLVKRAEGIPVSGPMLIEKAKDFYKQMRLTEPCVF--SGGWLWRFKARHGIKKLDASSEKQAADHQAAEQFCGFFRSLAAEHGLSPEQVYSADETGLVWRCLPNSAPDDGTVPH----FKQGKDRLT 217 HSP 2 Score: 66.2402 bits (160), Expect = 8.347e-32 Identity = 46/125 (36.80%), Postives = 63/125 (50.40%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXX--XXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR*KFRTSRKTTIEIQPINQGVISVF 2667 +L C N +GS++++PL IGK PR F + LP Y NAW + +F DWFH FV VR L + KA+LL+D+ AH Q L F S T++ +QP QG+ F Sbjct: 218 VLMCANATGSHRIKPLAIGKGGGPRAFR--GIQHLPIAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDSKAILLLDHSRAHSQESELVSENVFTIFLPSSVTSL-LQPTEQGIRRAF 339
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Tigd4 (tigger transposable element derived 4 [Source:MGI Symbol;Acc:MGI:2685264]) HSP 1 Score: 88.9669 bits (219), Expect = 1.443e-28 Identity = 62/196 (31.63%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 1677 VKKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRH--AFSQILVSGEIRSTDKKAA---NSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATK 2249 VKK+ S S +EK+ ++ +++GK++ ++A + GI +++L N+ K+ L + KR+++A L+ AL +W+ A+ VP++GP+L+ + F + + D FK SNGWLDRF R+ F V S D N P++L Y V+N E GL Y+MLP T A K Sbjct: 15 VKKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLR--FDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHND--FKCSNGWLDRFKSRYGLVFRAQPVEATGISIDPSTVWYQNVLPYYLND------YHPKNVFNVKETGLLYRMLPTNTFAFK 200 HSP 2 Score: 58.5362 bits (140), Expect = 1.443e-28 Identity = 48/159 (30.19%), Postives = 73/159 (45.91%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKIL-SVVIAR*KFRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNNGSVDQSLVLLTLKEVCHF 2772 L N GS KL L+IGK++APRCF + SLP +Y + AW +F W K + + + ++ +D+ PAH + K L S+ +A F S ++ +NQGVI K YR +IK + S + + LL + H Sbjct: 216 LALGTNMDGSEKLPLLIIGKNRAPRCFKGIK--SLPVYYEANRTAWMTAAIFEQWMQK-------LDEKFQAQKRRVVIFVDSCPAHPEVKNLKSIELA---FFPSCLSS-GFAAMNQGVIKSLKIKYRHCLIKKFLSSVESSKEFTFSLLDAVDTLHL 361
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|B1WC39|TIGD5_RAT (Tigger transposable element derived 5 OS=Rattus norvegicus OX=10116 GN=Tigd5 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.537e-41 Identity = 79/222 (35.59%), Postives = 122/222 (54.95%), Query Frame = 3 Query: 1686 RMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAA-----NSYPFWLKMFLE---------EGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRR---DRVT 2300 R ++S K+KL A++++K G+RQ + RD G+ TLRGW +E K+R + L +G Q K+++ A++ +D A+Y WF+ R GVP+SGP+++AQ E F R I G + FKAS+GW R+ KRH S + GE A + P + L+ EG Y +Q+YN + GL +++LP + T +++ G RR DRVT Sbjct: 62 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLDQLGGEVGTQRKKMRLANEEEIDRAVYSWFLTLRQHGVPLSGPVIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRIYGEAEPPVAGPAPVKEEPAQPSSAGLLLDGTPATLPHSEGGYGDEQIYNANVTGLYWRLLPEQNATPGTGDSREPGECSRRWCSDRVT 283 HSP 2 Score: 49.2914 bits (116), Expect = 4.537e-41 Identity = 23/64 (35.94%), Postives = 33/64 (51.56%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDV 2490 +L N +GS+KL+PL+IG+ P H N P Y S +AW + + WF + FV V Sbjct: 284 VLLAANLTGSHKLKPLVIGQLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGV 347
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q499M4|TIGD5_MOUSE (Tigger transposable element derived 5 OS=Mus musculus OX=10090 GN=Tigd5 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.969e-41 Identity = 81/224 (36.16%), Postives = 121/224 (54.02%), Query Frame = 3 Query: 1686 RMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAA----------------NSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRR---DRVT 2300 R ++S K+KL A++++K G+RQ + RD G+ TLRGW +E K+R + L +G Q K+++ A++ +D A+Y WF+ R GVP+SGP+++AQ E F R I G + FKAS+GW R+ KRH S + GE S A + P L EG Y +Q+YN + GL +++LP + T ++K G RR DRVT Sbjct: 63 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLDQLGGEVGTQRKKMRLANEEEIDRAVYSWFLTLRQHGVPLSGPVIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRIYGEAESPVAGPAPVKEEPAQSPGAVLVPDGAPATLPH--SEGGYGDEQIYNANVTGLYWRLLPEQASTPGTGDSKEPGGCSRRWRSDRVT 284 HSP 2 Score: 49.2914 bits (116), Expect = 4.969e-41 Identity = 23/64 (35.94%), Postives = 33/64 (51.56%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDV 2490 +L N +GS+KL+PL+IG+ P H N P Y S +AW + + WF + FV V Sbjct: 285 VLLAANLTGSHKLKPLVIGQLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGV 348
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9Y4A0|JERKL_HUMAN (Jerky protein homolog-like OS=Homo sapiens OX=9606 GN=JRKL PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.018e-39 Identity = 73/209 (34.93%), Postives = 109/209 (52.15%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKR--VKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 +KR+ + K+KL + +L++G QLA GI E+T+R + N+ KI + + D L KR +K + LD A+ +WF Q R +G PISGPI + E F + G D F S GWL RF +RH+ +I + E + D+ A + + F+E +Q+YN DE GL +K LP+R K G+K +RVT Sbjct: 5 RKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASS-SDSTSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL-GMDGDFNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETGLFWKCLPSRISVIK-GKCTVPGHKSIEERVT 210 HSP 2 Score: 79.337 bits (194), Expect = 1.018e-39 Identity = 51/144 (35.42%), Postives = 83/144 (57.64%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKIL----SVVIAR*KFRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNN 2718 ++ C N +G +KL+ ++GK+K PR F + ++LP Y + AW + ++F WF K FV VR +LR L+EKA+LL+DN P H +L + A K+ ++ IQP +QGVI+ K+NYR +++ + + N Sbjct: 211 IMCCANATGLHKLKLCVVGKAKKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFA--KYLPPNVASL-IQPSDQGVIATMKRNYRAGLLQNNLEEGN 351
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|B2RRL2|JERKL_MOUSE (Jerky protein homolog-like OS=Mus musculus OX=10090 GN=Jrkl PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.222e-39 Identity = 69/192 (35.94%), Postives = 104/192 (54.17%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKR--VKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATK 2249 +KR+ + K+KL + +L++G QLA GI E+T+R + N+ KI + + D L KR +K + LD A+ +WF Q R +G PISGPI + E F + G D F S GWL RF +RH+ +I + E + D+ A + + F+E+ +Q+YN DE GL +K LP+RT K Sbjct: 5 RKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASS-SDSTSLLAKRKSMKPSMYEELDKAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL-GMDGDFNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIEQENLQPEQIYNADETGLFWKCLPSRTTVIK 194 HSP 2 Score: 78.1814 bits (191), Expect = 1.222e-39 Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKIL----SVVIAR*KFRTSRKTTIEIQPINQGVISVFKQNYR 2682 ++ C N +G +KL+ ++GK++ PR F + ++LP Y + AW + ++F WF K FV VR +LR L+EKA+LL+DN P H +L + A K+ ++ IQP+ QGVI+ K+NYR Sbjct: 211 VMCCTNATGLHKLKLCVVGKARKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFA--KYLPPNVASL-IQPLGQGVIAAMKRNYR 339
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|G3MY25|TIGD5_BOVIN (Tigger transposable element-derived protein 5 OS=Bos taurus OX=9913 GN=TIGD5 PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.001e-39 Identity = 77/222 (34.68%), Postives = 114/222 (51.35%), Query Frame = 3 Query: 1686 RMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLK-----------------MFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 R ++S K+KL A++++K G+RQ + RD G+ TLRGW +E K+R L +G Q K+++ A++ +D A+Y WF+ R GVP+SGP+++AQ E F R I G + FKAS+GW R+ KRH S + GE A P + EG Y +Q+YN + GL +K+LP + G + R DRVT Sbjct: 58 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQRKKMRLANEEEIDRAVYSWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRIYGEAEPVAAGPAPGPPVKQEPAQPTRAGPLPDRAASTPAPAEGGYGDEQIYNANVTGLYWKLLPEQAAPVGAGGC---GRRWRGDRVT 276 HSP 2 Score: 51.2174 bits (121), Expect = 2.001e-39 Identity = 52/191 (27.23%), Postives = 88/191 (46.07%), Query Frame = 1 Query: 2281 RGETG*LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYP-AHHQRKILSVVIAR*KFRTSRKTTI----EIQ----------------------PINQGVISVFKQNYRR*MIKGMVLDNNGSVDQSLVLLTLKEVCHF 2772 RG+ +L N +GS+KL+PL+IG+ P H N P Y S +AW + + WF + FV VR +LR+ L++KA+LL+ + P + ++ ++ + R R E+Q P+ QGV++ FKQ Y+R +++ V GS + LK++ + Sbjct: 271 RGDRVTVLLAANLTGSHKLKPLVIGQLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVRRYLRRSCLQQKAVLLVAHPPCPSSEARMPALEESEETRRRCRPEPTGPPEELQTPDGAVRVLFLCRGSGRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCAGGSPLDFMRSFMLKDMLYL 461
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A452ICN3 (HTH CENPB-type domain-containing protein OS=Gopherus agassizii OX=38772 PE=4 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 4.297e-102 Identity = 117/178 (65.73%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 1677 VKKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGL 2210 ++KR SFS +EKL ALDQLK GK+Q QLAR+LGI E K+ SLP+ILE+ GLQ K+VK +D LDSALYQWFVQA E VPISGPILKAQ EKF+ LING +SK KAS+ WLDRF KRH SQ+LVS EI S DKKAA+SYP LK LEEGC TADQVY+CDE GL Sbjct: 9 LRKRKSFSAQEKLYALDQLKKGKQQIQLARELGIKE-----------KLCSLPSILEEETGLQSKKVKFPNDKSLDSALYQWFVQAHSERVPISGPILKAQAEKFDHLINGNESKSKASDSWLDRFKKRHTISQVLVSEEIHSADKKAADSYPIELKKLLEEGCNTADQVYSCDETGL 175 HSP 2 Score: 175.252 bits (443), Expect = 4.297e-102 Identity = 104/173 (60.12%), Postives = 124/173 (71.68%), Query Frame = 1 Query: 2263 NEKVIRRGETG*LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR*KFRTS---RKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNNGSVDQSLVLLTLKEVCHF 2772 NEK + RG T LLFC+ KSGS+K+RPLMI K ++PRCFHHVNM +LPF Y NS NAW N+++F WFHKTF+ RAHLRKLK EEKALLL+DN AH + L V K + S + TT EIQP+++G+IS FKQNYRR MI MV+DNN S D SL L LKEVCH Sbjct: 178 NEKALSRGRTKSLLFCIKKSGSHKVRPLMIRKVRSPRCFHHVNMQALPFEYTNSKNAWMNSSMFEGWFHKTFMPAARAHLRKLKQEEKALLLLDNCSAHSTAENL--VSHDSKIKVSYLPKNTTSEIQPLDKGIISAFKQNYRREMIGQMVVDNNSSFDTSLASLNLKEVCHL 348
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A452ICV0 (HTH CENPB-type domain-containing protein OS=Gopherus agassizii OX=38772 PE=4 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 5.281e-98 Identity = 117/178 (65.73%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 1677 VKKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGL 2210 ++KR SFS +EKL ALDQLK GK+Q QLAR+LGI E K+ SLP+ILE+ GLQ K+VK +D LDSALYQWFVQA E VPISGPILKAQ EKF+ LING +SK KAS+ WLDRF KRH SQ+LVS EI S DKKAA+SYP LK LEEGC TADQVY+CDE GL Sbjct: 9 LRKRKSFSAQEKLYALDQLKKGKQQIQLARELGIKE-----------KLCSLPSILEEETGLQSKKVKFPNDKSLDSALYQWFVQAHSERVPISGPILKAQAEKFDHLINGNESKSKASDSWLDRFKKRHTISQVLVSEEIHSADKKAADSYPIELKKLLEEGCNTADQVYSCDETGL 175 HSP 2 Score: 160.999 bits (406), Expect = 5.281e-98 Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 1 Query: 2263 NEKVIRRGETG*LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR*KFRTS---RKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNNGSVDQSLVLLT 2751 NEK + RG T LLFC+ KSGS+K+RPLMI K ++PRCFHHVNM +LPF Y NS NAW N+++F WFHKTF+ RAHLRKLK EEKALLL+DN AH + L V K + S + TT EIQP+++G+IS FKQNYRR MI MV+DNN S D SL T Sbjct: 178 NEKALSRGRTKSLLFCIKKSGSHKVRPLMIRKVRSPRCFHHVNMQALPFEYTNSKNAWMNSSMFEGWFHKTFMPAARAHLRKLKQEEKALLLLDNCSAHSTAENL--VSHDSKIKVSYLPKNTTSEIQPLDKGIISAFKQNYRREMIGQMVVDNNSSFDTSLPEFT 341
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A452HST6 (HTH CENPB-type domain-containing protein OS=Gopherus agassizii OX=38772 PE=4 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 1.157e-87 Identity = 174/316 (55.06%), Postives = 203/316 (64.24%), Query Frame = 3 Query: 1665 MVKQVKKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVTXXXXXXXXXXXXKAFDDWKIESTQMFPSCKYDVTSISLY*Q**CLDEYDRIL*LVSQNIRFRRSGSFKKTQARGKSTPPDG*LPCSSPAENLVSSDSKIKVSYL 2612 M V K SFS +EKL LDQLK GK+QTQLAR LGISESTLRGWK E K+ SLP ILE+ GLQ K+VK A+++ LDSALYQWFVQAR EGVPISGPILKAQ EKF+RLING +SKFKASNGWLDRF KRH SQ+LV GEI S DK+AA+ YP LK LEEGCYT DQVYNCDE GLC+KMLP+ TL TKT ++KREG+K+R+DRVTL K F P+ + + L + ++ L L+ + PP AENLVS + KIKVSYL Sbjct: 1 MDTPVHKCKSFSAQEKLYTLDQLK-GKQQTQLARYLGISESTLRGWKKEE-KLCSLPRILEEETGLQRKKVKFANNDSLDSALYQWFVQARSEGVPISGPILKAQAEKFDRLINGNESKFKASNGWLDRFKKRHTISQVLVFGEICSADKEAADFYPIELKKLLEEGCYTVDQVYNCDETGLCFKMLPDCTLTTKTDSHKREGFKQRKDRVTLSCFASTSLAFHKTFT----------PAVRAHLRK---------LKQEEKALLLLDN----------------CPAHPP---------AENLVSHEGKIKVSYL 270
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: H3AEI1 (HTH CENPB-type domain-containing protein OS=Latimeria chalumnae OX=7897 PE=4 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 8.716e-76 Identity = 98/206 (47.57%), Postives = 138/206 (66.99%), Query Frame = 3 Query: 1683 KRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 KR ++ EKL + ++ G+ + ++ D G+ ESTL+GW E K++S + + GL KR ++ASD LD+A+Y WFVQ R G PISGPI+KAQ EKF + +NG D+ F AS GWLDRF +RH SQ+ +SGEIRS D +AA+++P LK +LEE +T +QV N DE GL +KM P+ TLA K K EG+K+ ++R+T Sbjct: 4 KRKAYIVHEKLELIGRIHAGQSKAKIIHDTGVPESTLQGWLKEEYKLQSFVMTVSETKGLSRKRARTASDAPLDTAVYNWFVQERAVGTPISGPIVKAQAEKFCQELNG-DNNFSASQGWLDRFRRRHGISQVKISGEIRSADSEAASTFPDELKAYLEEEGFTEEQVCNADESGLYFKMFPDTTLAAKNDEKKSEGFKQDKNRIT 208 HSP 2 Score: 115.931 bits (289), Expect = 8.716e-76 Identity = 69/145 (47.59%), Postives = 88/145 (60.69%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR*K-FRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNNGSVD 2730 LF NK+G+ KL PL IGKS+ P CFHH NM SLP Y NS AW +F DWF +FV +R HL +L EKA+LL+DN PAH + L K F + TT +IQP+NQG+I FK+ YR+ ++K +V NN D Sbjct: 209 FLFACNKTGNRKLTPLCIGKSRQPHCFHHTNMKSLPIEYKNSKKAWMTGDLFKDWFFNSFVPSMRHHLYSKRLPEKAVLLLDNCPAHPPAESLKTSDGNIKVFYLPKNTTSKIQPLNQGIIVNFKKAYRKGLVKELVASNNSITD 353
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: H3AAS9 (Uncharacterized protein OS=Latimeria chalumnae OX=7897 GN=TIGD7 PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.100e-75 Identity = 100/211 (47.39%), Postives = 143/211 (67.77%), Query Frame = 3 Query: 1668 VKQVKKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 V + KR +++ EKL +D++ G+ + +++ D G+ ESTL+GW E +R+ + + GL KR ++ASD LD+A+Y WFVQ R G PISGPI+KAQ EKF + +NGE++ F AS GWLDRF +RH SQ+ +SGEIRS D +AAN++ K +LEE +T +QVYN DE GL +KMLP+ TLA K+ EG+K+ ++RVT Sbjct: 1 VTAMGKRKAYNVHEKLELIDRIHAGQSKAKISYDTGVPESTLQGWLKEEYNLRAFVMTVSETEGLSRKRARTASDAPLDTAVYNWFVQERAVGTPISGPIVKAQAEKFCKELNGENN-FAASQGWLDRFKRRHGISQVKISGEIRSADSEAANTFSNEFKAYLEEEGFTEEQVYNADESGLYFKMLPHTTLAAKS-----EGFKQDKNRVT 205 HSP 2 Score: 114.39 bits (285), Expect = 1.100e-75 Identity = 72/159 (45.28%), Postives = 99/159 (62.26%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR*K-FRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNNGSVDQSLVLLTLKEVCHF 2772 LF NK+G++KL PL IGKS PRCF+H NM SLP Y NS AW +F DWF K V VR HLR +L EKA+LL+DN PAH + L K F + TT +IQP++QG+I+ FK+ YR+ ++K +V +N S+ L + +LK++ + Sbjct: 206 FLFACNKTGNHKLTPLCIGKSCQPRCFYHTNMKSLPIEYKNSKKAWMTGDIFKDWFFKFCVPSVRRHLRSKRLPEKAVLLLDNCPAHPPAESLKTSDGNIKVFYLPKNTTSKIQPLDQGIIANFKKAYRKELVKELVASDN-SITNHLKMYSLKDMMYL 363
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Cavefish
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:103030561]) HSP 1 Score: 90.8929 bits (224), Expect = 3.993e-18 Identity = 66/211 (31.28%), Postives = 101/211 (47.87%), Query Frame = 1 Query: 52 YHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNST---NKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFNSKFI 654 Y + + LK+ L H GCVNT++W+ +G ILSG DD L I P+ + I + NI SAKFMP+ N+ QIVS S G I+ + N++ F H G I T ++ + F + D T FD+R + + +N + ++I+I PL Y +A+G SDS VR++D+R L ++ Sbjct: 28 YLGRREFVQRLKLEAILNVHDGCVNTISWNDTGEYILSGSDDTNLVI-------TNPYNRKVKTTIRSGHRANIFSAKFMPLTNDQQIVSCSGDGIIYYTHTEKSADINRQCQ-FTCHYGTAYEIMTVPNDPYTFLSCGEDGTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLGTRATGNYM 230
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Cavefish
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:103030561]) HSP 1 Score: 90.8929 bits (224), Expect = 4.532e-18 Identity = 65/205 (31.71%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 70 YTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNST---NKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFNSKFI 654 + + LK+ L H GCVNT++W+ +G ILSG DD L I P+ + I + NI SAKFMP+ N+ QIVS S G I+ + N++ F H G I T ++ + F + D T FD+R + + +N + ++I+I PL Y +A+G SDS VR++D+R L ++ Sbjct: 34 FVQRLKLEAILNVHDGCVNTISWNDTGEYILSGSDDTNLVI-------TNPYNRKVKTTIRSGHRANIFSAKFMPLTNDQQIVSCSGDGIIYYTHTEKSADINRQCQ-FTCHYGTAYEIMTVPNDPYTFLSCGEDGTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLGTRATGNYM 230
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Cavefish
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:103030561]) HSP 1 Score: 90.1225 bits (222), Expect = 6.843e-18 Identity = 65/205 (31.71%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 70 YTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNST---NKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFNSKFI 654 + + LK+ L H GCVNT++W+ +G ILSG DD L I P+ + I + NI SAKFMP+ N+ QIVS S G I+ + N++ F H G I T ++ + F + D T FD+R + + +N + ++I+I PL Y +A+G SDS VR++D+R L ++ Sbjct: 34 FVQRLKLEAILNVHDGCVNTISWNDTGEYILSGSDDTNLVI-------TNPYNRKVKTTIRSGHRANIFSAKFMPLTNDQQIVSCSGDGIIYYTHTEKSADINRQCQ-FTCHYGTAYEIMTVPNDPYTFLSCGEDGTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLGTRATGNYM 230
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Cavefish
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:103030561]) HSP 1 Score: 90.1225 bits (222), Expect = 6.988e-18 Identity = 65/205 (31.71%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 70 YTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNST---NKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFNSKFI 654 + + LK+ L H GCVNT++W+ +G ILSG DD L I P+ + I + NI SAKFMP+ N+ QIVS S G I+ + N++ F H G I T ++ + F + D T FD+R + + +N + ++I+I PL Y +A+G SDS VR++D+R L ++ Sbjct: 34 FVQRLKLEAILNVHDGCVNTISWNDTGEYILSGSDDTNLVI-------TNPYNRKVKTTIRSGHRANIFSAKFMPLTNDQQIVSCSGDGIIYYTHTEKSADINRQCQ-FTCHYGTAYEIMTVPNDPYTFLSCGEDGTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLGTRATGNYM 230
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Cavefish
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:103030561]) HSP 1 Score: 90.1225 bits (222), Expect = 7.878e-18 Identity = 65/205 (31.71%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 70 YTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNN-QIVSASKCGSIFLVDVNST---NKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFNSKFI 654 + + LK+ L H GCVNT++W+ +G ILSG DD L I P+ + I + NI SAKFMP+ N+ QIVS S G I+ + N++ F H G I T ++ + F + D T FD+R + + +N + ++I+I PL Y +A+G SDS VR++D+R L ++ Sbjct: 34 FVQRLKLEAILNVHDGCVNTISWNDTGEYILSGSDDTNLVI-------TNPYNRKVKTTIRSGHRANIFSAKFMPLTNDQQIVSCSGDGIIYYTHTEKSADINRQCQ-FTCHYGTAYEIMTVPNDPYTFLSCGEDGTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLGTRATGNYM 230
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: JRKL (JRK like [Source:HGNC Symbol;Acc:HGNC:6200]) HSP 1 Score: 89.3521 bits (220), Expect = 9.912e-35 Identity = 68/209 (32.54%), Postives = 103/209 (49.28%), Query Frame = 3 Query: 1677 VKKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQ-VKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 ++KR+ S + KL L +L+ G+ QLA + + T+ K + K+ L +L+ GL +K ++ + L+ A+Y+WF Q R G+PI+ +L Q F+ + G F AS GWL F +R+ +++V E S D A + FLEE + QVY E GL +K LP RT A N R G RDR+ Sbjct: 2 LRKRIVLSLETKLRILRRLEKGETAKQLALEFNLGHRTIYDIKKAKEKLWRLNKVLDVDTGLSYMKVIRESRFPQLEEAVYKWFRQHRAMGLPITSSMLIEQARHFHEHL-GLTEPFAASAGWLRNFKRRYCIGEVVV--EKVSDDAAEALAARESFMKFLEEQGLSPQQVYAATETGLYWKSLPART----AAGNCRVG----RDRIA 199 HSP 2 Score: 76.6406 bits (187), Expect = 9.912e-35 Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKIL---SVVIAR*KFRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMVLDNNGSV 2727 LL C + +G+++L ++G++ PR F ++++ LP HY N AW T +F WF + FV +V +L L L KA+LL+DN PAH L + + F ++P+ QG + K YRR + +GM L + + Sbjct: 200 LLLCASAAGTHRLPLAVVGRAAHPRVFRNLDVSLLPVHYYNHRRAWVTTDIFRRWFRERFVPEVTQNLEALGLPPKAVLLLDNSPAHPDDGSLCCGDITV----FYLPPNLAPALKPLEQGAVGHLKVLYRREVARGMALGVDADL 341
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004617.1 (pep scaffold:Pmarinus_7.0:GL477874:26927:28564:-1 gene:ENSPMAG00000004208.1 transcript:ENSPMAT00000004617.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 109.383 bits (272), Expect = 3.401e-34 Identity = 66/215 (30.70%), Postives = 113/215 (52.56%), Query Frame = 3 Query: 1683 KRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDN-VLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSK--------FKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 KR+ S ++K+ L++++ G+ +A D I +T+R + N KI + L+ + ++ ++DN LD+ LY+WF+Q R +G P+SGP+L + + F+ + F AS GWL F +RH ++ V GE +D A Y + +++ A Q+YN DE GL +K LP++TLA+ + N GYK ++ +T Sbjct: 5 KRVFLSLEKKIEVLEKIRTGRSLQAIAADYNIGYTTVRDIRDNADKISKFFSELQSANATKKRKTTRSADNKELDAKLYEWFLQQRAQGHPVSGPMLCEKAKVFSAKLRSRQEGGDEEEEETFMASQGWLRSFKERHGIRRLSVVGERHGSDVDAVREYIARFQAMVDDKGLCASQIYNADETGLFWKSLPSKTLASSSEVNA-AGYKCSKEGMT 218 HSP 2 Score: 54.6842 bits (130), Expect = 3.401e-34 Identity = 34/87 (39.08%), Postives = 49/87 (56.32%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAH 2559 +L C N SG+++L+ +GKSK ++ LP HY AW + F DWF FV VR +L + KL +A+L++DN PAH Sbjct: 219 VLMCANASGTHRLKLTCLGKSKNLGALKDLSEDCLPVHYYGQRKAWMDQFTFKDWFFTKFVPAVRDNLFREKLGSRAILVIDNAPAH 305
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000423.1 (pep scaffold:Pmarinus_7.0:GL480036:4967:5889:-1 gene:ENSPMAG00000000380.1 transcript:ENSPMAT00000000423.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 125.946 bits (315), Expect = 6.059e-34 Identity = 74/210 (35.24%), Postives = 115/210 (54.76%), Query Frame = 3 Query: 1677 VKKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDK-KAANSYPFWLKMFLEEGCYTADQVYNCDEM--GLCYKMLPNRT-LATKTANNKREGYKKRRDR 2294 V +R S++ KEKL ++++K+G + + R+LGI E T+RGW E ++R + L++ GLQ K+ + + + ++D LY WFV R G P+SGP LK Q E F + E KF+AS+GWL R+ KRH +I ++GE S + K S P + +E YT + + M L MLP T L + + ++ +K DR Sbjct: 4 VNRRKSYTIKEKLAIIERVKSGVSKAHINRELGIPEGTIRGWIAEEGRLRWFLDKLDEAPGLQRKKTRLSRNEIVDDCLYAWFVHKRSLGSPVSGPALKMQAETFFCDLKLE-GKFRASDGWLWRWKKRHGIGEITLAGESESHPRPKVPRSIPVEFQCVIERDVYTVTSIISRVAMKSALFSWMLPTDTSLGPEISPETKQAWKLSNDR 212 HSP 2 Score: 37.3502 bits (85), Expect = 6.059e-34 Identity = 22/59 (37.29%), Postives = 33/59 (55.93%), Query Frame = 1 Query: 2305 FCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFV 2481 FC NK+G++KL + GKSK+PR F +S+ + +S+N T V W +FV Sbjct: 216 FCFNKAGTHKLL-CVSGKSKSPRFFKFKEKLSV--QHTSSSNDRMTTNVLLTWLQDSFV 271
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005656.1 (pep scaffold:Pmarinus_7.0:GL476578:539135:542172:1 gene:ENSPMAG00000005132.1 transcript:ENSPMAT00000005656.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 70.8626 bits (172), Expect = 1.091e-19 Identity = 50/195 (25.64%), Postives = 93/195 (47.69%), Query Frame = 3 Query: 1740 GKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLIN------GEDS---KFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRV 2297 G+ +++ LG++ ST+ G I++ + + ++ R +S ++ +L W +P+S +++A K RL N GE + F AS GW +F R+ + ++GE D +AA ++ LK +E G Y+ +QV+N +E GL +K +P T ++ G+K +DR+ Sbjct: 30 GETVRDISKSLGLATSTVCGIHKASENIKARAQRMTPLVAAKLTRKRSPLMENMEESLGMWIKHQNEHRMPLSTALIQA---KALRLFNDFKKRAGESAANETFGASTGWYAKFKGRYNLRHLKMTGETAGADVEAAEAFKSTLKEIIEGGGYSPEQVFNVNETGLFWKRMPASTFLSREEKTA-PGFKASKDRL 220 HSP 2 Score: 44.2838 bits (103), Expect = 1.091e-19 Identity = 30/87 (34.48%), Postives = 44/87 (50.57%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAH 2559 LL N +G KL+PL++ SK PR LP + ++ W +VF DW F + + +K L+ KALLL++N P H Sbjct: 222 LLVGANAAGDCKLKPLLVYHSKTPRALKGCIKADLPVIWRSNKKGWITASVFLDWLKNHFCPAIEKYCKKKNLDHKALLLLNNAPGH 308
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001313.1 (pep scaffold:Pmarinus_7.0:GL487606:277:3092:-1 gene:ENSPMAG00000001181.1 transcript:ENSPMAT00000001313.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 69.3218 bits (168), Expect = 1.586e-17 Identity = 45/196 (22.96%), Postives = 93/196 (47.45%), Query Frame = 3 Query: 1722 LDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSK----FKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRV 2297 + Q + G+ +++ LG++ ST+ G + I + + + + R +S ++ +L W +P+S +++ + + + E+S+ F AS GW +F R+ + ++GE D +AA ++ LK +E G Y+ +QV+N +E L +K +P T ++ G+K +DR+ Sbjct: 24 IRQYEGGETVRDISKSLGLATSTVCGIRKASENIEAKAQRMTPFVAATLMRKRSPLMENMEESLGMWIKHQNEHRMPLSTALIQVKALIQAKALRLEESRQAETFGASTGWYAKFKGRYNLHHLKMTGETAGADVEAAEAFKSTLKEIIEGGGYSPEQVFNVNETRLFWKRMPASTFLSREKKTA-PGFKASKDRL 218 HSP 2 Score: 38.5058 bits (88), Expect = 1.586e-17 Identity = 29/87 (33.33%), Postives = 43/87 (49.43%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAH 2559 LL N +G +L+PL++ SK PR LP + ++ W +VF DW F + + +K L+ KALLL +N P H Sbjct: 220 LLVGANGAGDCRLKPLLVYHSKTPRYLKGCIKADLPI-WRSNKKGWITASVFLDWLKNHFCPAIEKYCKKKNLDLKALLLRNNAPGH 305
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Nematostella
Match: EDO44738 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUQ6]) HSP 1 Score: 67.0106 bits (162), Expect = 1.215e-22 Identity = 57/199 (28.64%), Postives = 95/199 (47.74%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNG-KRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLE-EGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKRE 2270 K+R S EK+ + + + G K Q +LA I ++T+ + I DG +V + SD ++ +QW+ + R +G ISGP+L+ + F ++ +D F+ASNGWL+ F +RH S G S + + N W + +E Y + +YN E GL Y+ LP++ L +T + E Sbjct: 1 KRRRELSLSEKIQLIHESQTGTKSQRKLADIYQIGKTTVHEILKKKDDILKAYEQNVDGGRKRVCTRSAYSD--INRLAWQWYERMRAQGNQISGPMLQEKARTFAAELDMKD--FRASNGWLEGFRRRHGIS----FGASFSGYETSVNVTTEWTEKIMEVTDGYRSTDIYNLVETGLYYRALPDKNLVPETESTSTE 191 HSP 2 Score: 58.9214 bits (141), Expect = 1.215e-22 Identity = 44/166 (26.51%), Postives = 76/166 (45.78%), Query Frame = 1 Query: 2305 FCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR*KFRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMV--LDNNG---SVDQSLVLLTLKEVCHFYVDTL 2787 C N G + +PL+IG + P CF ++ LP + + AW T++F DW + + + + LL +DN P H L+ V + S T ++QP+ QG++ F+ YRR ++ + LD++ S Q + +T + C + TL Sbjct: 197 LCCNMDGEFE-KPLVIGPTANPPCFAKLDSECLPVIWRANRRAWITTSIFADWLR-------TLDRKMRQKDRRILLFLDNSPPHPPTLQLTNVKLVFLIKPSNNTVNQLQPLTQGIVEAFRMAYRRKVLFSTLAKLDDSNSPRSAKQLMQEITELDACFWIAATL 354
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Nematostella
Match: EDO40000 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8J7]) HSP 1 Score: 79.337 bits (194), Expect = 3.217e-19 Identity = 49/129 (37.98%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 1869 KRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKF-NRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSY-PFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATK 2249 +R+ + L+ ALY W V+ + +GVPISGP+LK F N LI+ S F SNGW+DR+ KR + VSGEI S + S+ L L + Y + +++ DE GL YK LP++ + K Sbjct: 22 QRLTPCGNEDLEKALYTWSVRMKQQGVPISGPVLKETAIHFANELISIVLSGFVGSNGWIDRWKKRQDVAFKTVSGEILSCTLEMTASWEESTLPTLLSK--YALEDMFDADEFGLFYKALPDKLMHLK 148 HSP 2 Score: 35.039 bits (79), Expect = 3.217e-19 Identity = 18/52 (34.62%), Postives = 26/52 (50.00%), Query Frame = 1 Query: 2320 SGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWT-NTTVFYDWFHK 2472 S KL +IGKS+ PRCF V +LP Y W ++ +F +W + Sbjct: 170 SSGEKLPMFVIGKSQKPRCFSGVR--NLPCRYRAPKKGWILDSNLFEEWVRE 219
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Nematostella
Match: EDO29936 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T282]) HSP 1 Score: 74.3294 bits (181), Expect = 1.677e-13 Identity = 60/206 (29.13%), Postives = 97/206 (47.09%), Query Frame = 1 Query: 55 HDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIP---------FLKMNLPCSLSA----IAIHPLCSYKIAIGGSDSCVRVFDKRYLNK 633 H + E L + ++LEGH GCVN + +SG + SG DD I + LS + K V I+ ++ NI S KF+P ++I++ + + + N+ V++ H G +A + +AS D T FD+R+ + + +N+ S A IAI+PL +AIG +D VR++D R L K Sbjct: 28 HVYPPFVERLGLEKELEGHTGCVNCLELTESGELLASGSDDLNAIIWEPLS-YKKKCV------IATGHTGNIFSIKFLPCTGDRIIATAAADTKVRIHSVEKNETTQVYHCHIGRVKRLAVAPNMPSLVWSASEDGTIRQFDLRQPHCCNSNSKNCNNVLINLNVHSSALAEPKCIAINPLRPNMMAIGCNDPFVRIYDHRMLAK 226
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Nematostella
Match: EDO28293 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SWN2]) HSP 1 Score: 63.1586 bits (152), Expect = 6.572e-12 Identity = 42/115 (36.52%), Postives = 57/115 (49.57%), Query Frame = 1 Query: 76 ENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQ-IVSASKCGSIFLVDVNSTNKELNVFYK-HSGPTLNI 414 + LK L GH GCVNT+AW + G +LSG DD L I+ +P V I + NI SAKFMP NN+ IVS + G + +++ FY H+G T + Sbjct: 7 QCLKRSGTLSGHDGCVNTIAWSECGELLLSGSDDCRLNIY-------RPCENKLVQCIRSGHRANIFSAKFMPCSNNKWIVSCAGDGMLQFTNLDRPEMIGTCFYNCHTGTTYEV 114
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Nematostella
Match: EDO31891 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SWN2]) HSP 1 Score: 63.1586 bits (152), Expect = 6.572e-12 Identity = 42/115 (36.52%), Postives = 57/115 (49.57%), Query Frame = 1 Query: 76 ENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQ-IVSASKCGSIFLVDVNSTNKELNVFYK-HSGPTLNI 414 + LK L GH GCVNT+AW + G +LSG DD L I+ +P V I + NI SAKFMP NN+ IVS + G + +++ FY H+G T + Sbjct: 7 QCLKRSGTLSGHDGCVNTIAWSECGELLLSGSDDCRLNIY-------RPCENKLVQCIRSGHRANIFSAKFMPCSNNKWIVSCAGDGMLQFTNLDRPEMIGTCFYNCHTGTTYEV 114
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000036785.1 (pep primary_assembly:ASM223467v1:22:11796267:11802170:-1 gene:ENSORLG00000024024.1 transcript:ENSORLT00000036785.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 70.4774 bits (171), Expect = 5.569e-21 Identity = 59/208 (28.37%), Postives = 94/208 (45.19%), Query Frame = 3 Query: 1680 KKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYP-FWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 ++R + +K+ LD LK G+ + + R G++EST+R K E IR I KRV + V + + + Q E P + + + E S F AS GW D+F KR + + GE D A +Y K ++EG Y +QV+N E GL +K +P++ A+ G++ ++DRVT Sbjct: 7 RQRKMLTVTQKVGLLDMLKEGRSYSAVGRHYGLNESTVRYIKKEENNIRRTAAI---SFNKDAKRVVT----VRNKTIIRMESQGDVEPSPSTSAL------------HSEPSPFYASKGWFDKFQKRFGLKSVSLQGEATPADAAGAEAYAKTKFKTIIKEGTYKPEQVFNMGETGLFWKQIPSQAKAS--------GFRGQKDRVT 187 HSP 2 Score: 51.6026 bits (122), Expect = 5.569e-21 Identity = 42/136 (30.88%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPFHYINSNNAWTNTTVFYDWFHKTFVSDVXXXXXXXXXXXXXXXXMDNYPAHHQRKILSVVIAR*KFRTSRKTTIEIQPINQGVISVFKQNYRR*MIKGMV 2706 L+ C N +G ++P +I + K PR + NM +LP +++++ AW + +WF F+ +V+ +L + L+ K LLL+DN A LS + +F +++ IQP++QG+I FK Y R ++ +V Sbjct: 188 LVMCGNAAGF-MIKPGLISRLKNPRALKNKNMSALPVYWMHNTMAWMTKALNLNWFKGCFIPEVKGYLTEKGLDFKVLLLIDN--AGGFADDLSHDGVQIEFLPPNTSSL-IQPMDQGIIRTFKALYTRNTLQHLV 319
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:101156538]) HSP 1 Score: 97.4413 bits (241), Expect = 3.437e-20 Identity = 69/211 (32.70%), Postives = 103/211 (48.82%), Query Frame = 1 Query: 28 NSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQ-IVSASKCGSIFLVDVNST---NKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLN 630 N R +S F + + + LK+ L H GCVNT++W+++G ILSG DD L I P+ K I + NI SAKFMP N+Q I+S S G I+ + N++ F H G I T ++ F + D T FD+R + + +N + ++I+I PL Y +A+G SDS VR++D+R L Sbjct: 21 NPRGRSVFLSERREFVQRLKLESTLNVHDGCVNTISWNETGEYILSGSDDTFLVI-------TNPYNKKVKTSIRSGHRANIFSAKFMPHTNDQEIISCSGDGIIYYTHTEKSPEHNRQCQ-FTCHYGTAYEIMTVPNDPCTFLSCGEDGTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLG 223
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:101156538]) HSP 1 Score: 89.7373 bits (221), Expect = 9.602e-18 Identity = 66/203 (32.51%), Postives = 98/203 (48.28%), Query Frame = 1 Query: 52 YHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQ-IVSASKCGSIFLVDVNST---NKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLN 630 Y + + LK+ L H GCVNT++W+++G ILSG DD L I P+ K I + NI SAKFMP N+Q I+S S G I+ + N++ F H G I T ++ F + D T FD+R + + +N + ++I+I PL Y +A+G SDS VR++D+R L Sbjct: 31 YLGRREFVQRLKLESTLNVHDGCVNTISWNETGEYILSGSDDTFLVI-------TNPYNKKVKTSIRSGHRANIFSAKFMPHTNDQEIISCSGDGIIYYTHTEKSPEHNRQCQ-FTCHYGTAYEIMTVPNDPCTFLSCGEDGTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLG 225
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:101156538]) HSP 1 Score: 89.7373 bits (221), Expect = 9.637e-18 Identity = 66/203 (32.51%), Postives = 98/203 (48.28%), Query Frame = 1 Query: 52 YHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQ-IVSASKCGSIFLVDVNST---NKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLN 630 Y + + LK+ L H GCVNT++W+++G ILSG DD L I P+ K I + NI SAKFMP N+Q I+S S G I+ + N++ F H G I T ++ F + D T FD+R + + +N + ++I+I PL Y +A+G SDS VR++D+R L Sbjct: 31 YLGRREFVQRLKLESTLNVHDGCVNTISWNETGEYILSGSDDTFLVI-------TNPYNKKVKTSIRSGHRANIFSAKFMPHTNDQEIISCSGDGIIYYTHTEKSPEHNRQCQ-FTCHYGTAYEIMTVPNDPCTFLSCGEDGTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLG 225
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Match: dcaf6 (DDB1 and CUL4 associated factor 6 [Source:NCBI gene;Acc:101156538]) HSP 1 Score: 89.7373 bits (221), Expect = 1.058e-17 Identity = 66/203 (32.51%), Postives = 98/203 (48.28%), Query Frame = 1 Query: 52 YHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQ-IVSASKCGSIFLVDVNST---NKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPF------LKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLN 630 Y + + LK+ L H GCVNT++W+++G ILSG DD L I P+ K I + NI SAKFMP N+Q I+S S G I+ + N++ F H G I T ++ F + D T FD+R + + +N + ++I+I PL Y +A+G SDS VR++D+R L Sbjct: 31 YLGRREFVQRLKLESTLNVHDGCVNTISWNETGEYILSGSDDTFLVI-------TNPYNKKVKTSIRSGHRANIFSAKFMPHTNDQEIISCSGDGIIYYTHTEKSPEHNRQCQ-FTCHYGTAYEIMTVPNDPCTFLSCGEDGTVRWFDLRMKTSCTKEDCKDDILINCRRAATSISISPLVPYYLAVGCSDSSVRIYDRRMLG 225
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000073620.1 (SMESG000073620.1) HSP 1 Score: 445.662 bits (1145), Expect = 0.000e+0 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1 Query: 4 MLTHWRFMNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 642 MLTHWRFMNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN Sbjct: 1 MLTHWRFMNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 213 HSP 2 Score: 340.117 bits (871), Expect = 0.000e+0 Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 2 Query: 686 DVEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTM 1174 +VEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTM Sbjct: 214 NVEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTM 376
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000073620.1 (SMESG000073620.1) HSP 1 Score: 444.891 bits (1143), Expect = 0.000e+0 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1 Query: 4 MLTHWRFMNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 642 MLTHWRFMNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN Sbjct: 1 MLTHWRFMNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 213 HSP 2 Score: 341.658 bits (875), Expect = 0.000e+0 Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 2 Query: 686 DVEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTME 1177 +VEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTME Sbjct: 214 NVEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTME 377
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000073620.1 (SMESG000073620.1) HSP 1 Score: 428.713 bits (1101), Expect = 0.000e+0 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 Query: 25 MNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 642 MNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN Sbjct: 1 MNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 206 HSP 2 Score: 340.502 bits (872), Expect = 0.000e+0 Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 2 Query: 686 DVEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTM 1174 +VEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTM Sbjct: 207 NVEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTM 369
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000073620.1 (SMESG000073620.1) HSP 1 Score: 427.943 bits (1099), Expect = 0.000e+0 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 Query: 25 MNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 642 MNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN Sbjct: 1 MNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGTKILSGGDDAILRIHQFLSDWDKPWVKDHVYEISLPNSRNILSAKFMPIYNNQIVSASKCGSIFLVDVNSTNKELNVFYKHSGPTLNIATFEDEAFNFATASNDKTFCIFDIRESNNIPFLKMNLPCSLSAIAIHPLCSYKIAIGGSDSCVRVFDKRYLNKSFN 206 HSP 2 Score: 342.428 bits (877), Expect = 0.000e+0 Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 2 Query: 686 DVEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTME 1177 +VEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTME Sbjct: 207 NVEKTLKYVTEICRPLQFPIDNKISNRSPLYNYGRRCVNSVSFEPRLGNHILVSYMYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQERGDIICPPSIQSFLDDLQLNESSYESKIDFTIESQLKSVKRYKEVQIYVGHQNCRTME 370
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000013943.1 (SMESG000013943.1) HSP 1 Score: 371.318 bits (952), Expect = 1.062e-117 Identity = 180/212 (84.91%), Postives = 191/212 (90.09%), Query Frame = 3 Query: 1665 MVKQVKKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEVKIRSLPNILEDGLGLQVKRVKSASDNVLDSALYQWFVQARFEGVPISGPILKAQGEKFNRLINGEDSKFKASNGWLDRFMKRHAFSQILVSGEIRSTDKKAANSYPFWLKMFLEEGCYTADQVYNCDEMGLCYKMLPNRTLATKTANNKREGYKKRRDRVT 2300 M KQV+KRMSFSTKEKLLALDQLKNGK+QTQLARD GISEST+RGWKTNE+ IRSLPNILED L LQ KRVKSASDNVLDSALYQW VQAR EGVPISGPILKA+ EKFNR INGEDSKFKASN WLDRF KRH SQ+LVSGEI S DK+ ANSYPF LK FLEEGCYTADQVYNCDE GLCYKMLPNRTLATKT N+KREG+KKR+DR+T Sbjct: 1 MEKQVQKRMSFSTKEKLLALDQLKNGKQQTQLARDFGISESTVRGWKTNEIMIRSLPNILEDELILQRKRVKSASDNVLDSALYQWLVQARSEGVPISGPILKAKAEKFNRRINGEDSKFKASNIWLDRFKKRHTISQVLVSGEIHSADKEDANSYPFLLKKFLEEGCYTADQVYNCDETGLCYKMLPNRTLATKTDNHKREGFKKRKDRLT 212 HSP 2 Score: 73.559 bits (179), Expect = 1.062e-117 Identity = 32/37 (86.49%), Postives = 34/37 (91.89%), Query Frame = 1 Query: 2299 LLFCVNKSGSNKLRPLMIGKSKAPRCFHHVNMMSLPF 2409 LLFC+NKSGS+KL PLMIGKSKAPRCFHHVNM SLP Sbjct: 213 LLFCINKSGSHKLSPLMIGKSKAPRCFHHVNMKSLPL 249 HSP 3 Score: 51.6026 bits (122), Expect = 3.122e-6 Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 1 Query: 2692 IKGMVLDNNGSVDQSLVLLTLKEVCH 2769 + GMVLDNNGSVDQSL LLTLKEVCH Sbjct: 249 LTGMVLDNNGSVDQSLALLTLKEVCH 274 The following BLAST results are available for this feature:
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 4
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000201 ID=SMED30000201|Name=HTH CENPB-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3202bpback to top protein sequence of SMED30000201-orf-1 >SMED30000201-orf-1 ID=SMED30000201-orf-1|Name=SMED30000201-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=231bp RMLTHWRFMNSRSKSSFYHDSASYTENLKVFEKLEGHRGCVNTVAWDKSGback to top protein sequence of SMED30000201-orf-2 >SMED30000201-orf-2 ID=SMED30000201-orf-2|Name=SMED30000201-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=110bp MYDSIYLFDTRQQENRQSDFQPERLPLDTSSFRIHYNWENTGPPRPEGEQback to top protein sequence of SMED30000201-orf-3 >SMED30000201-orf-3 ID=SMED30000201-orf-3|Name=SMED30000201-orf-3|organism=Schmidtea mediterranea sexual|type=polypeptide|length=217bp MVKQVKKRMSFSTKEKLLALDQLKNGKRQTQLARDLGISESTLRGWKTNEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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