CAP-Gly domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30000144 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of CAP-Gly domain-containing protein vs. Ensembl Human
Match: CLIP1 (CAP-Gly domain containing linker protein 1 [Source:HGNC Symbol;Acc:HGNC:10461]) HSP 1 Score: 60.077 bits (144), Expect = 8.043e-10 Identity = 32/88 (36.36%), Postives = 45/88 (51.14%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKS 340 + ++IG V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ K+ Sbjct: 210 RELKIGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKA 293
BLAST of CAP-Gly domain-containing protein vs. Ensembl Human
Match: CLIP1 (CAP-Gly domain containing linker protein 1 [Source:HGNC Symbol;Acc:HGNC:10461]) HSP 1 Score: 55.4546 bits (132), Expect = 4.383e-8 Identity = 31/82 (37.80%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + ++IG V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 210 RELKIGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTT 287
BLAST of CAP-Gly domain-containing protein vs. Ensembl Human
Match: CLIP1 (CAP-Gly domain containing linker protein 1 [Source:HGNC Symbol;Acc:HGNC:10461]) HSP 1 Score: 55.0694 bits (131), Expect = 6.299e-8 Identity = 31/82 (37.80%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + ++IG V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 210 RELKIGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTT 287
BLAST of CAP-Gly domain-containing protein vs. Ensembl Human
Match: CLIP1 (CAP-Gly domain containing linker protein 1 [Source:HGNC Symbol;Acc:HGNC:10461]) HSP 1 Score: 55.0694 bits (131), Expect = 6.310e-8 Identity = 31/82 (37.80%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + ++IG V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 210 RELKIGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTT 287
BLAST of CAP-Gly domain-containing protein vs. Ensembl Human
Match: CLIP1 (CAP-Gly domain containing linker protein 1 [Source:HGNC Symbol;Acc:HGNC:10461]) HSP 1 Score: 55.0694 bits (131), Expect = 6.319e-8 Identity = 31/82 (37.80%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + ++IG V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 210 RELKIGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTT 287
BLAST of CAP-Gly domain-containing protein vs. Ensembl Celegans
Match: tbcb-1 (Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]) HSP 1 Score: 47.3654 bits (111), Expect = 2.960e-6 Identity = 22/68 (32.35%), Postives = 35/68 (51.47%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFT 280 +NI +G EV G+V + G+ ++G W+G++ +G +DG + G RYF P YG F Sbjct: 144 KNIMVGNRCEVTVGAQMARRGEVAYVGATKFKEGVWVGVKYDEPVGKNDGSVAGVRYFDCDPKYGGFV 211
BLAST of CAP-Gly domain-containing protein vs. Ensembl Fly
Match: Khc-73 (gene:FBgn0019968 transcript:FBtr0329957) HSP 1 Score: 55.0694 bits (131), Expect = 2.754e-8 Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 2 Query: 62 KMVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 ++VL + I +G+ V + N + G +RF G+ + G WIG+EL + G +DG + G +YF +P +G+F SDK+ Sbjct: 1776 ELVLPEWIVVGESVLIRPYNTS---GVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKPKHGMFVRSDKL 1850
BLAST of CAP-Gly domain-containing protein vs. Ensembl Fly
Match: Khc-73 (gene:FBgn0019968 transcript:FBtr0346265) HSP 1 Score: 55.0694 bits (131), Expect = 2.850e-8 Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 2 Query: 62 KMVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 ++VL + I +G+ V + N + G +RF G+ + G WIG+EL + G +DG + G +YF +P +G+F SDK+ Sbjct: 1790 ELVLPEWIVVGESVLIRPYNTS---GVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKPKHGMFVRSDKL 1864
BLAST of CAP-Gly domain-containing protein vs. Ensembl Fly
Match: Khc-73 (gene:FBgn0019968 transcript:FBtr0329955) HSP 1 Score: 55.0694 bits (131), Expect = 3.092e-8 Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 2 Query: 62 KMVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 ++VL + I +G+ V + N + G +RF G+ + G WIG+EL + G +DG + G +YF +P +G+F SDK+ Sbjct: 1776 ELVLPEWIVVGESVLIRPYNTS---GVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKPKHGMFVRSDKL 1850
BLAST of CAP-Gly domain-containing protein vs. Ensembl Fly
Match: Khc-73 (gene:FBgn0019968 transcript:FBtr0087357) HSP 1 Score: 55.0694 bits (131), Expect = 3.181e-8 Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 2 Query: 62 KMVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 ++VL + I +G+ V + N + G +RF G+ + G WIG+EL + G +DG + G +YF +P +G+F SDK+ Sbjct: 1798 ELVLPEWIVVGESVLIRPYNTS---GVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKPKHGMFVRSDKL 1872
BLAST of CAP-Gly domain-containing protein vs. Ensembl Fly
Match: Khc-73 (gene:FBgn0019968 transcript:FBtr0329956) HSP 1 Score: 55.0694 bits (131), Expect = 3.208e-8 Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 2 Query: 62 KMVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 ++VL + I +G+ V + N + G +RF G+ + G WIG+EL + G +DG + G +YF +P +G+F SDK+ Sbjct: 1785 ELVLPEWIVVGESVLIRPYNTS---GVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKPKHGMFVRSDKL 1859
BLAST of CAP-Gly domain-containing protein vs. Ensembl Zebrafish
Match: CABZ01072096.1 (pep chromosome:GRCz11:10:44408675:44411032:-1 gene:ENSDARG00000079483.4 transcript:ENSDART00000111509.4 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CABZ01072096.1) HSP 1 Score: 55.8398 bits (133), Expect = 9.405e-9 Identity = 28/73 (38.36%), Postives = 38/73 (52.05%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKS 340 G G VRF G + KG+W G+EL +G +DG + G RYF P YGLF + K+ I T+ K+ Sbjct: 185 GGSKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGGRYFQCLPKYGLFAPTHKVTRIGFPSTTPAKSKA 257
BLAST of CAP-Gly domain-containing protein vs. Ensembl Zebrafish
Match: clip1a (CAP-GLY domain containing linker protein 1a [Source:ZFIN;Acc:ZDB-GENE-060526-282]) HSP 1 Score: 54.299 bits (129), Expect = 7.479e-8 Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 2 Query: 137 GKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 204 GVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTT 265
BLAST of CAP-Gly domain-containing protein vs. Ensembl Zebrafish
Match: kif13bb (kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]) HSP 1 Score: 53.1434 bits (126), Expect = 1.725e-7 Identity = 23/58 (39.66%), Postives = 33/58 (56.90%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 GT G VR+ G + KG W+G+EL G +DG + GR YF PGYG+ +++ Sbjct: 1985 GTNKTGTVRYVGQTDFAKGVWVGVELDVPAGKNDGSVGGRHYFHCNPGYGVLVRPNRV 2042
BLAST of CAP-Gly domain-containing protein vs. Ensembl Zebrafish
Match: si:dkeyp-47f9.4 (si:dkeyp-47f9.4 [Source:ZFIN;Acc:ZDB-GENE-131126-9]) HSP 1 Score: 52.7582 bits (125), Expect = 1.842e-7 Identity = 24/77 (31.17%), Postives = 42/77 (54.55%), Query Frame = 2 Query: 83 IQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISIN 313 + +G V ++ +N + +R+ G+ G W+G+EL S G +DG + RRYF RPG+G+ ++ + IN Sbjct: 399 LHLGMQVLLISAN---EMATIRYIGTAEFAPGLWLGLELRSPKGKNDGSVGSRRYFSCRPGHGVLVRPSRVTYRGIN 472
BLAST of CAP-Gly domain-containing protein vs. Ensembl Zebrafish
Match: si:dkeyp-47f9.4 (si:dkeyp-47f9.4 [Source:ZFIN;Acc:ZDB-GENE-131126-9]) HSP 1 Score: 50.447 bits (119), Expect = 2.337e-7 Identity = 27/91 (29.67%), Postives = 44/91 (48.35%), Query Frame = 2 Query: 83 IQIGQDVEVLRSNGTISL--------------GKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISIN 313 I++G + S+GT+ L +R+ G+ G W+G+EL S G +DG + RRYF RPG+G+ ++ + IN Sbjct: 63 IRVGGNTSCPGSDGTVKLHLGMQVLLISANEMATIRYIGTAEFAPGLWLGLELRSPKGKNDGSVGSRRYFSCRPGHGVLVRPSRVTYRGIN 153
BLAST of CAP-Gly domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000016691.1 (uncharacterized LOC100495307 [Source:NCBI gene;Acc:100495307]) HSP 1 Score: 60.077 bits (144), Expect = 8.242e-10 Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 2 Query: 80 NIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIEL-ASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 ++++G V+ R G IS G +++KG + GR ++G+EL S++G DG+ G RYF+ +P G+F KI Sbjct: 401 DLKVGDLVKFSRPAGKISKGTIQYKGCLPGRVEVYLGVELEGSEVGKHDGIFQGTRYFLCKPNKGVFVNFSKI 473
BLAST of CAP-Gly domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000016706.1 (uncharacterized LOC100495307 [Source:NCBI gene;Acc:100495307]) HSP 1 Score: 59.6918 bits (143), Expect = 1.226e-9 Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 2 Query: 80 NIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIEL-ASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 ++++G V+ R G IS G +++KG + GR ++G+EL S++G DG+ G RYF+ +P G+F KI Sbjct: 655 DLKVGDLVKFSRPAGKISKGTIQYKGCLPGRVEVYLGVELEGSEVGKHDGIFQGTRYFLCKPNKGVFVNFSKI 727
BLAST of CAP-Gly domain-containing protein vs. Ensembl Xenopus
Match: clip1 (CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:100124823]) HSP 1 Score: 58.9214 bits (141), Expect = 2.304e-9 Identity = 26/71 (36.62%), Postives = 39/71 (54.93%), Query Frame = 2 Query: 137 GKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIK 349 G +RF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ K+ ++ Sbjct: 161 GVIRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTSVR 231
BLAST of CAP-Gly domain-containing protein vs. Ensembl Xenopus
Match: vstm5 (V-set and transmembrane domain containing 5 [Source:Xenbase;Acc:XB-GENE-940096]) HSP 1 Score: 56.6102 bits (135), Expect = 1.641e-8 Identity = 22/58 (37.93%), Postives = 36/58 (62.07%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 G G VR+ G+++ +G W+GIEL +Q+G DG + G+ YF +P YG+F ++ Sbjct: 1407 GENKTGTVRYIGTVDFSRGTWVGIELHAQLGKHDGTVKGKEYFRCKPKYGVFVRPSRL 1464
BLAST of CAP-Gly domain-containing protein vs. Ensembl Xenopus
Match: vstm5 (V-set and transmembrane domain containing 5 [Source:Xenbase;Acc:XB-GENE-940096]) HSP 1 Score: 56.6102 bits (135), Expect = 1.771e-8 Identity = 22/58 (37.93%), Postives = 36/58 (62.07%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 G G VR+ G+++ +G W+GIEL +Q+G DG + G+ YF +P YG+F ++ Sbjct: 1453 GENKTGTVRYIGTVDFSRGTWVGIELHAQLGKHDGTVKGKEYFRCKPKYGVFVRPSRL 1510
BLAST of CAP-Gly domain-containing protein vs. Ensembl Mouse
Match: Kif13b (kinesin family member 13B [Source:MGI Symbol;Acc:MGI:1098265]) HSP 1 Score: 55.0694 bits (131), Expect = 4.147e-8 Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIR 298 GT G VR+ G + ++G WIG+EL G +DG + G++YF PGYGL ++R Sbjct: 1730 GTNKTGIVRYIGPTDFQEGTWIGVELDLPAGKNDGSIGGKQYFRCNPGYGLLVRPSRVR 1788
BLAST of CAP-Gly domain-containing protein vs. Ensembl Mouse
Match: Clip1 (CAP-GLY domain containing linker protein 1 [Source:MGI Symbol;Acc:MGI:1928401]) HSP 1 Score: 55.0694 bits (131), Expect = 4.225e-8 Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + +++G V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 209 RELKVGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTT 286
BLAST of CAP-Gly domain-containing protein vs. Ensembl Mouse
Match: Kif13b (kinesin family member 13B [Source:MGI Symbol;Acc:MGI:1098265]) HSP 1 Score: 55.0694 bits (131), Expect = 4.261e-8 Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIR 298 GT G VR+ G + ++G WIG+EL G +DG + G++YF PGYGL ++R Sbjct: 1726 GTNKTGIVRYIGPTDFQEGTWIGVELDLPAGKNDGSIGGKQYFRCNPGYGLLVRPSRVR 1784
BLAST of CAP-Gly domain-containing protein vs. Ensembl Mouse
Match: Clip1 (CAP-GLY domain containing linker protein 1 [Source:MGI Symbol;Acc:MGI:1928401]) HSP 1 Score: 54.6842 bits (130), Expect = 5.539e-8 Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + +++G V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 209 RELKVGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTT 286
BLAST of CAP-Gly domain-containing protein vs. Ensembl Mouse
Match: Clip1 (CAP-GLY domain containing linker protein 1 [Source:MGI Symbol;Acc:MGI:1928401]) HSP 1 Score: 54.6842 bits (130), Expect = 5.683e-8 Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + +++G V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 209 RELKVGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTT 286
BLAST of CAP-Gly domain-containing protein vs. UniProt/SwissProt
Match: sp|O42184|CLIP1_CHICK (CAP-Gly domain-containing linker protein 1 OS=Gallus gallus OX=9031 GN=CLIP1 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 1.907e-7 Identity = 32/91 (35.16%), Postives = 47/91 (51.65%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIK 349 + ++IG V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ K+ ++ Sbjct: 213 RELKIGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLFAPVHKVTKIGFPSTTPAKAKTTVR 299
BLAST of CAP-Gly domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9JK25|CLIP1_RAT (CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 2.527e-7 Identity = 31/82 (37.80%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + ++IG V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 209 RELKIGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTT 286
BLAST of CAP-Gly domain-containing protein vs. UniProt/SwissProt
Match: sp|P30622|CLIP1_HUMAN (CAP-Gly domain-containing linker protein 1 OS=Homo sapiens OX=9606 GN=CLIP1 PE=1 SV=2) HSP 1 Score: 54.6842 bits (130), Expect = 3.745e-7 Identity = 31/82 (37.80%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + ++IG V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 210 RELKIGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTT 287
BLAST of CAP-Gly domain-containing protein vs. UniProt/SwissProt
Match: sp|Q922J3|CLIP1_MOUSE (CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 3.975e-7 Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + +++G V V G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ Sbjct: 209 RELKVGDRVLV----GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTT 286
BLAST of CAP-Gly domain-containing protein vs. UniProt/SwissProt
Match: sp|Q54Z01|TBCB_DICDI (Tubulin-specific chaperone B OS=Dictyostelium discoideum OX=44689 GN=tbcb PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 7.719e-7 Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 2 Query: 83 IQIGQDVEVLRSNGT---ISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFT 280 I++G +V+ + T LGKV++ G++ G WIG+EL +G +DG + G++YF P YG F Sbjct: 187 IKVGDRCKVISDDPTNYDERLGKVQYVGTVEFSSGVWIGVELDLPLGKNDGSVKGKQYFQCSPKYGCFA 255
BLAST of CAP-Gly domain-containing protein vs. TrEMBL
Match: A0A267EQM2 (CAP-Gly domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig004166g1 PE=4 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.885e-31 Identity = 82/242 (33.88%), Postives = 127/242 (52.48%), Query Frame = 2 Query: 65 MVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYK-SLIKTEIGDNFLKNEISDRSLDTEKKIIISKDFLEKSFCLDKRINSSDTFTQNRYPLRHLIGKIEVEXXXXXXXXXXXSYQIPLQRNSYYLHHEDFITPSAIPDYYIPRQKLK---SLTHENLAKIHTPKTHNHYEMRDFLH-ENWWNDV 775 MVLF NI IGQ+VEV N + KVR+KG +N KGDW+G+EL +G +DG+ G RYF VR YG+F T+D+IRF + R FN YK + + D L N + D + +S ++ + R+ S+ + P + + + V+K P+P + + +FI+P++IPDY +P L+ + +N + PK H+ + +RDFLH N+WND+ Sbjct: 3 MVLFDNIAIGQNVEVKHLN-ELYPAKVRYKGGLNSMKGDWVGLELYEPVGYTDGLYRGHRYFFVRKDYGIFVTADQIRFPRMKRRLFNKYKVADPEQATTDASLFNTQRPATADPRDPVYLSDEYSRLAM---HRLPSAGACSLFEPPRNYHLKQSCVKKPPEPPEPEKPA--------------PEFISPASIPDYVVPPSVLRRHVARHRDNPEALRFPKHHSLHTIRDFLHSSNYWNDM 226
BLAST of CAP-Gly domain-containing protein vs. TrEMBL
Match: A0A267DHE0 (CAP-Gly domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig016323g2 PE=4 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.013e-30 Identity = 82/242 (33.88%), Postives = 127/242 (52.48%), Query Frame = 2 Query: 65 MVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYK-SLIKTEIGDNFLKNEISDRSLDTEKKIIISKDFLEKSFCLDKRINSSDTFTQNRYPLRHLIGKIEVEXXXXXXXXXXXSYQIPLQRNSYYLHHEDFITPSAIPDYYIPRQKLK---SLTHENLAKIHTPKTHNHYEMRDFLH-ENWWNDV 775 MVLF NI IGQ+VEV N + KVR+KG +N KGDW+G+EL +G +DG+ G RYF VR YG+F T+D+IRF + R FN YK + + D L N + D + +S ++ + R+ S+ + P + + + V+K P+P + + +FI+P++IPDY +P L+ + +N + PK H+ + +RDFLH N+WND+ Sbjct: 9 MVLFDNIAIGQNVEVKHLN-ELYPAKVRYKGGLNSMKGDWVGLELYEPVGYTDGLYRGHRYFFVRKDYGIFVTADQIRFPRMKRRLFNKYKVADPEQATTDASLFNTQRPATADPRDPVYLSDEYSRLAM---HRLPSAGACSLFEPPRNYHLKQSCVKKPPEPPEPEKPA--------------PEFISPASIPDYVVPPSVLRRHVARHRDNPEALRFPKHHSLHTIRDFLHSSNYWNDM 232
BLAST of CAP-Gly domain-containing protein vs. TrEMBL
Match: R7VFT5 (CAP-Gly domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_228358 PE=4 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.603e-27 Identity = 81/258 (31.40%), Postives = 122/258 (47.29%), Query Frame = 2 Query: 65 MVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIKTEIGDNFLKNEISDRSLDTEKKIIISK-----------DFLEKSFCLDKRINSSDTFTQ-------NRYPLRHLIG---KIEVEXXXXXXXXXXXSYQIPLQRNSYYLHHEDFITPSAIPDYYIPRQKLKSLTHENLAKIHTPKTHNHYEMRDFLHENWWNDV 775 MVLF NI IGQ VEVLR G + LG VRFKG +N G+W+G+EL + G DGM+NGRRYF G+G+FT S KIRF+ + R +N+Y+S + D SL + K + S L + +N+S + Q +PL H++ + +K + + +K +YQ Y + + FIT +IP ++P K + H P+ R+ ++ N WN + Sbjct: 1 MVLFDNIAIGQRVEVLR-GGRVFLGNVRFKGFLNSIPGEWVGVELDLKAGKHDGMMNGRRYFKCPAGHGIFTPSAKIRFVKMKRCLYNSYRS-----------SPTVVDESLFSSKGYLTSTLPYQIYHGYVVLVLGNVSVTTQDVNASHSANQPDVLSDRPHFPLTHMVSNSIQAATLRKQQLQRSKCFAYQSSPIHVEYDVEYNQFITSPSIPKTHMPHAVQKKRVMSGWDRDHLPRDMTVNTARESVYYNTWNHL 246
BLAST of CAP-Gly domain-containing protein vs. TrEMBL
Match: A0A1S3JG89 (CAP-Gly domain-containing linker protein 2 isoform X2 OS=Lingula unguis OX=7574 GN=LOC106172661 PE=4 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.542e-26 Identity = 78/247 (31.58%), Postives = 118/247 (47.77%), Query Frame = 2 Query: 65 MVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNY-----KSLIKTEIGDNFLKNEISDRSLDTEKKIIISKDFLEKSFCLDKRINSSDTFTQNR-YPLRHLIG---KIEVEXXXXXXXXXXXSYQIPLQRNSYYLHHEDFITPSAIPDYYIPRQKLKSLTHENLAKIHTPKTHNHYEMRDFLHENWWNDVS 778 MVL NI + Q VEV R NG+I G VR+KG + + GDW+G+ L +G DG+ GRRYF + G+G+FT + +IRFI + R +N Y KS + + N K E DR D I IS D+ ++ +S D + + + Y L H + +P +++ Y P+ + Y L + FI+ +IP ++P LK H + + RD WND+S Sbjct: 1 MVLHSNINVNQRVEVKR-NGSIYTGMVRYKGPLVTQAGDWVGVALDEPVGTHDGLFKGRRYFSCKDGHGIFTRAQQIRFIPLTRCLYNKYYCVSRKSYVDETLFGNTSKPEPDDRPYD---PISISGDYTRRA--KSAFFDSEDMYARPKSYHLSHRVSNRIPAATMTRPYTSMSQYSYYSTPIS-SEYALDRDSFISSPSIPKIHMPHSALKRQVSRGWENSHYVREMSVASGRDSAKLLQWNDIS 240
BLAST of CAP-Gly domain-containing protein vs. TrEMBL
Match: A0A1S3JES1 (dynactin, 150 kDa isoform isoform X1 OS=Lingula unguis OX=7574 GN=LOC106172661 PE=4 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.330e-25 Identity = 78/247 (31.58%), Postives = 117/247 (47.37%), Query Frame = 2 Query: 65 MVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNY-----KSLIKTEIGDNFLKNEISDRSLDTEKKIIISKDFLEKSFCLDKRINSSDTFTQNR-YPLRHLIG---KIEVEXXXXXXXXXXXSYQIPLQRNSYYLHHEDFITPSAIPDYYIPRQKLKSLTHENLAKIHTPKTHNHYEMRDFLHENWWNDVS 778 MVL NI + Q VEV R NG I G VR+KG + + GDW+G+ L +G DG+ GRRYF + G+G+FT + +IRFI + R +N Y KS + + N K E DR D I IS D+ ++ N+ D + + + Y L H + +P +++ Y P+ + Y L + FI+ +IP ++P LK H + + RD WND+S Sbjct: 1 MVLHSNINVNQRVEVKR-NGGIYTGMVRYKGPLVTQAGDWVGVALDEPVGTHDGLFKGRRYFSCKDGHGIFTRAQQIRFIPMTRCLYNKYYCVNRKSYVDETLFGNTSKPEPDDRPYD---PISISGDYTRRA--KSAFFNNEDMYARPKSYHLSHRVSNRIPAATMTRPYTSMSQYSYYSTPIS-SEYALDRDSFISSPSIPKIHMPHSALKRQVSRGWENSHYVREMSVASGRDSAKLLQWNDIS 240
BLAST of CAP-Gly domain-containing protein vs. Ensembl Cavefish
Match: clip1a (CAP-Gly domain-containing linker protein 1-like [Source:NCBI gene;Acc:111191575]) HSP 1 Score: 55.4546 bits (132), Expect = 2.472e-8 Identity = 27/71 (38.03%), Postives = 39/71 (54.93%), Query Frame = 2 Query: 137 GKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIK 349 G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ K+ ++ Sbjct: 209 GVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVR 279
BLAST of CAP-Gly domain-containing protein vs. Ensembl Cavefish
Match: clip1a (CAP-Gly domain-containing linker protein 1-like [Source:NCBI gene;Acc:111191575]) HSP 1 Score: 55.4546 bits (132), Expect = 2.475e-8 Identity = 27/71 (38.03%), Postives = 39/71 (54.93%), Query Frame = 2 Query: 137 GKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIK 349 G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ K+ ++ Sbjct: 209 GVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVR 279
BLAST of CAP-Gly domain-containing protein vs. Ensembl Cavefish
Match: kif13ba (kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]) HSP 1 Score: 54.299 bits (129), Expect = 6.114e-8 Identity = 26/71 (36.62%), Postives = 40/71 (56.34%), Query Frame = 2 Query: 83 IQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 +++G+ V V S G VR+ G + G W+G+EL S G +DG + GR+YF PGYG+ D++ Sbjct: 1606 LKVGESVTVAGSK----CGTVRYIGLTDFSDGIWVGVELDSPAGKNDGSVGGRQYFRCNPGYGVLVRPDRV 1672
BLAST of CAP-Gly domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000037622.1 (pep primary_assembly:Astyanax_mexicanus-2.0:9:32938202:32940307:-1 gene:ENSAMXG00000034654.1 transcript:ENSAMXT00000037622.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 50.0618 bits (118), Expect = 2.392e-7 Identity = 22/60 (36.67%), Postives = 35/60 (58.33%), Query Frame = 2 Query: 134 LGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISIN 313 +G +R+ G+ + G W+G+EL S G +DG + RRYF R GYG+ ++ + IN Sbjct: 93 MGTIRYLGTADFAPGLWLGLELRSAKGKNDGSVGSRRYFSCRSGYGVLVRPSRVSYRGIN 152
BLAST of CAP-Gly domain-containing protein vs. Ensembl Cavefish
Match: clip2 (CAP-Gly domain containing linker protein 2 [Source:NCBI gene;Acc:103031388]) HSP 1 Score: 51.9878 bits (123), Expect = 2.702e-7 Identity = 29/82 (35.37%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 +++++G V V G G VR+ G + KG+W G+EL +G +DG + G RYF P +GLF K+ I TS Sbjct: 208 KDLRVGDRVLV----GGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFAPIHKVIRIGFPSTS 285
BLAST of CAP-Gly domain-containing protein vs. Ensembl Sea Lamprey
Match: si:dkeyp-47f9.4 (si:dkeyp-47f9.4 [Source:ZFIN;Acc:ZDB-GENE-131126-9]) HSP 1 Score: 58.9214 bits (141), Expect = 3.124e-10 Identity = 25/64 (39.06%), Postives = 35/64 (54.69%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISIN 313 GT +G VRF G + G W+G+EL + G DG + G RYF RPG G+ ++ + IN Sbjct: 585 GTGEMGTVRFVGEVGFAAGTWLGLELRAPRGKHDGAVGGHRYFSCRPGCGVMVRPGRVSYRGIN 648 HSP 2 Score: 45.8246 bits (107), Expect = 6.124e-6 Identity = 20/63 (31.75%), Postives = 35/63 (55.56%), Query Frame = 2 Query: 137 GKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSF 325 G +RF+G+ + G W GIEL G +DG + G RYF +G+F +++ ++++ S Sbjct: 451 GVLRFQGTTHFAPGHWYGIELEQPSGRNDGSVAGVRYFQCPAKHGVFAPPSRVQRLTVSMESL 513
BLAST of CAP-Gly domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006027.1 (pep scaffold:Pmarinus_7.0:GL478150:21952:49796:1 gene:ENSPMAG00000005440.1 transcript:ENSPMAT00000006027.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 56.9954 bits (136), Expect = 1.497e-9 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + ++IG V V +GT + G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF + K+ I T+ Sbjct: 234 RELKIGDRVLV---SGTKA-GVVRFLGEADFAKGEWCGVELDEPLGKNDGSVAGTRYFQCQPKYGLFAPTHKVTRIGFPSTT 311
BLAST of CAP-Gly domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006020.1 (pep scaffold:Pmarinus_7.0:GL478150:21952:49796:1 gene:ENSPMAG00000005440.1 transcript:ENSPMAT00000006020.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 56.6102 bits (135), Expect = 1.832e-9 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 + ++IG V V +GT + G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF + K+ I T+ Sbjct: 230 RELKIGDRVLV---SGTKA-GVVRFLGEADFAKGEWCGVELDEPLGKNDGSVAGTRYFQCQPKYGLFAPTHKVTRIGFPSTT 307
BLAST of CAP-Gly domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004647.1 (pep scaffold:Pmarinus_7.0:GL484285:5077:12891:1 gene:ENSPMAG00000004232.1 transcript:ENSPMAT00000004647.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 53.5286 bits (127), Expect = 1.594e-8 Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTS 322 +++++G V V G G VRF G + KG+W G+EL +G +DG + G RYF + YGLF K+ I TS Sbjct: 189 RDLKMGDRVLV----GGTKAGVVRFVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQQRYGLFAPIHKVAKIGFPSTS 266
BLAST of CAP-Gly domain-containing protein vs. Ensembl Sea Lamprey
Match: tbcb (tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]) HSP 1 Score: 48.1358 bits (113), Expect = 5.748e-7 Identity = 23/65 (35.38%), Postives = 33/65 (50.77%), Query Frame = 2 Query: 83 IQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLF 277 I +GQ +V G V F G + + G W+G++ +G +DG + GRRYF P YG F Sbjct: 162 ITVGQRCQVEVMGQPHKRGTVMFVGQTDFKPGFWVGVKYDEPLGKNDGSVGGRRYFECEPRYGAF 226
BLAST of CAP-Gly domain-containing protein vs. Ensembl Yeast
Match: NIP100 (Large subunit of the dynactin complex; dynactin is involved in partitioning the mitotic spindle between mother and daughter cells; putative ortholog of mammalian p150(glued) [Source:SGD;Acc:S000006095]) HSP 1 Score: 48.521 bits (114), Expect = 5.644e-7 Identity = 25/63 (39.68%), Postives = 32/63 (50.79%), Query Frame = 2 Query: 137 GKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPG--------YGLFTTSDKIRF 301 G+V+F G KG W GIEL +G +DG NG RYF + YGLF D ++F Sbjct: 28 GRVKFIGETQFAKGIWYGIELDKPLGKNDGSANGIRYFDIDLKKANSNGGYYGLFCKKDTLQF 90
BLAST of CAP-Gly domain-containing protein vs. Ensembl Nematostella
Match: EDO32673 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUE3]) HSP 1 Score: 99.7525 bits (247), Expect = 2.315e-25 Identity = 70/236 (29.66%), Postives = 111/236 (47.03%), Query Frame = 2 Query: 65 MVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIKTEIGDNFLKNEISDRSLDTEK-------KIIISKDFLEKSFCLD----------KRINSSDTFTQNRYPLRHLIGKIEVEXXXXXXXXXXXSYQIPLQRNSY-YLHHEDFITPSAIPDYYIPRQKLKSLTHENLAKIHTPK 718 MV F NI +G VEVL G + G VR+ G + + G+WIGIEL ++G+ G+ G +YF + G+G+FT + IRF S R+ FNNY+++ D L +++ +LD + ++ +L+ F ++ +R + ++ HL+G K + Q N Y Y H E FITP +IP +PR LKS+ +N P+ Sbjct: 1 MVQFHNINVGARVEVL-WRGEVCKGAVRYTGMLVAKPGEWIGIELDDRVGSHSGLHKGVQYFKCKDGHGIFTRARNIRFNSNKRSVFNNYRTISPNSSVDEVLFKKMNGMTLDVDHPDSIERGPPVVRSSYLKTLFKVNVFNSIFYQILERKEDNLWSRSRQFHKSHLVG-------AHIKPATMQRPQTAQPSNPYGYKHREPFITPPSIPLCGVPRPVLKSMVKQNYFGTSIPR 228
BLAST of CAP-Gly domain-containing protein vs. Ensembl Nematostella
Match: EDO30311 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T153]) HSP 1 Score: 60.077 bits (144), Expect = 2.852e-10 Identity = 28/73 (38.36%), Postives = 44/73 (60.27%), Query Frame = 2 Query: 77 QNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 Q+IQ+G V V R+ G + G V++ GS+ R +IG+EL S G DG G+R+F +P G+F + +K+ Sbjct: 1186 QDIQLGMRVLVTRTRGNVGRGVVKYVGSLPDRTDTYIGVELDSGEGKHDGSFGGKRFFRCKPNRGIFVSYNKV 1258
BLAST of CAP-Gly domain-containing protein vs. Ensembl Nematostella
Match: EDO30218 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T1F2]) HSP 1 Score: 50.8322 bits (120), Expect = 5.163e-9 Identity = 21/54 (38.89%), Postives = 32/54 (59.26%), Query Frame = 2 Query: 137 GKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIR 298 G +RF G+ G W+G+EL G +DG ++G RYF +P +G F DK++ Sbjct: 3 GVIRFIGATEFSPGPWVGVELDKAGGKNDGSVSGVRYFACKPRFGSFVRPDKVK 56
BLAST of CAP-Gly domain-containing protein vs. Ensembl Nematostella
Match: EDO33600 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SRR5]) HSP 1 Score: 53.1434 bits (126), Expect = 3.444e-8 Identity = 22/54 (40.74%), Postives = 32/54 (59.26%), Query Frame = 2 Query: 134 LGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 +G +R+ G+ KG+W G+EL +G +DG + G RYF GYGLF K+ Sbjct: 106 IGTLRYVGTTEFAKGEWAGVELDEPLGKNDGAVAGTRYFQCIQGYGLFAPVHKV 159 HSP 2 Score: 48.9062 bits (115), Expect = 8.580e-7 Identity = 26/80 (32.50%), Postives = 42/80 (52.50%), Query Frame = 2 Query: 137 GKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFIS-INRTSFNNYKSLIKTEIGDNFL 373 G + F G KGDW GI L G +DG + G +YF +P +G+FT +KI ++ + + + ++ EIGD + Sbjct: 21 GVIAFLGETKFAKGDWAGIILDDPTGKNDGSVAGEKYFECKPLHGVFTKLEKITKVNQVTESPGSPVENSSSLEIGDRVV 100
BLAST of CAP-Gly domain-containing protein vs. Ensembl Nematostella
Match: EDO43343 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZ45]) HSP 1 Score: 51.6026 bits (122), Expect = 1.265e-7 Identity = 26/75 (34.67%), Postives = 41/75 (54.67%), Query Frame = 2 Query: 71 LFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 + ++ QIG+ V V G V+F G G W+GIEL++ +G +DG + G RYF +P +G+F K+ Sbjct: 355 IARDFQIGEHVLVAGQKP----GIVQFIGQTQFASGWWLGIELSNPVGKNDGSVGGVRYFTCKPRFGVFAPVAKV 425 HSP 2 Score: 51.6026 bits (122), Expect = 1.300e-7 Identity = 20/58 (34.48%), Postives = 33/58 (56.90%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 G G +RF G G+W+G+EL +G +DG ++G +YF P +G+F + K+ Sbjct: 237 GGTKSGVLRFCGRTEFASGEWVGVELDQPVGKNDGSVDGVQYFQCEPNHGIFAPASKV 294
BLAST of CAP-Gly domain-containing protein vs. Ensembl Medaka
Match: clip1a (CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:101171418]) HSP 1 Score: 56.6102 bits (135), Expect = 1.088e-8 Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIK 349 G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ K+ ++ Sbjct: 212 GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVR 287
BLAST of CAP-Gly domain-containing protein vs. Ensembl Medaka
Match: si:dkeyp-47f9.4 (CAP-Gly domain containing linker protein family member 4 [Source:NCBI gene;Acc:101171960]) HSP 1 Score: 56.225 bits (134), Expect = 1.120e-8 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 2 Query: 143 VRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNN 331 +R+ G+ + G W+G+EL S G +DG + GRRYF RPGYG+ ++ + IN + N Sbjct: 635 IRYFGTADFAPGLWLGLELRSPKGKNDGSVGGRRYFTCRPGYGVLVRPSRVTYRGINGSRLVN 697
BLAST of CAP-Gly domain-containing protein vs. Ensembl Medaka
Match: clip1a (CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:101171418]) HSP 1 Score: 55.8398 bits (133), Expect = 1.767e-8 Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIK 349 G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ K+ ++ Sbjct: 212 GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVR 287
BLAST of CAP-Gly domain-containing protein vs. Ensembl Medaka
Match: clip1a (CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:101171418]) HSP 1 Score: 55.8398 bits (133), Expect = 1.938e-8 Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIK 349 G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ K+ ++ Sbjct: 212 GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVR 287
BLAST of CAP-Gly domain-containing protein vs. Ensembl Medaka
Match: clip1a (CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:101171418]) HSP 1 Score: 55.8398 bits (133), Expect = 1.938e-8 Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 2 Query: 122 GTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIK 349 G G VRF G + KG+W G+EL +G +DG + G RYF +P YGLF K+ I T+ K+ ++ Sbjct: 212 GGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVR 287
BLAST of CAP-Gly domain-containing protein vs. Planmine SMEST
Match: SMESG000000637.1 (SMESG000000637.1) HSP 1 Score: 457.603 bits (1176), Expect = 2.489e-165 Identity = 235/239 (98.33%), Postives = 237/239 (99.16%), Query Frame = 2 Query: 65 MVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLIKTEIGDNFLKNEISDRSLDTEKKIIISKDFLEKSFCLDKRINSSDTFTQNRYPLRHLIGKIEVEXXXXXXXXXXXSYQIPLQRNSYYLHHEDFITPSAIPDYYIPRQKLKSLTHENLAKIHTPKTHNHYEMRDFLHENWWNDVSL 781 MVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSL KTEIGDNFLKNEISDRSLDTEKKIIISKDFLEKSFCLD+ INSSDTFTQNRYPLRHLIGK+EVEKKPKPKLTKTKSYQIPLQRNSYYLHHEDFITPSAIPDYYIPRQKLKSLTHENLAKIHTPKTHNHYEMRDFLHENWWNDVSL Sbjct: 1 MVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISINRTSFNNYKSLPKTEIGDNFLKNEISDRSLDTEKKIIISKDFLEKSFCLDEGINSSDTFTQNRYPLRHLIGKVEVEKKPKPKLTKTKSYQIPLQRNSYYLHHEDFITPSAIPDYYIPRQKLKSLTHENLAKIHTPKTHNHYEMRDFLHENWWNDVSL 239
BLAST of CAP-Gly domain-containing protein vs. Planmine SMEST
Match: SMESG000015698.1 (SMESG000015698.1) HSP 1 Score: 58.151 bits (139), Expect = 2.324e-9 Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 2 Query: 116 SNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIR 298 S+ T +G +RF G+ +G W+GIEL + IG +DG ++G RYF + YGLF +K++ Sbjct: 151 SSSTQKIGTLRFIGNTKFAEGIWVGIELDNPIGRNDGSVDGVRYFSCKSQYGLFALENKVQ 211
BLAST of CAP-Gly domain-containing protein vs. Planmine SMEST
Match: SMESG000006189.1 (SMESG000006189.1) HSP 1 Score: 52.373 bits (124), Expect = 1.418e-7 Identity = 25/79 (31.65%), Postives = 40/79 (50.63%), Query Frame = 2 Query: 59 FKMVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKI 295 F + ++ + V+ +R G ++ G V F G + GR +G+EL + G DG+ G RYF R G+F + KI Sbjct: 677 FTPKVASDLHLDDVVKFVRPGGKMATGTVCFIGHLPGRSEVCVGLELGEEAGKHDGLFEGHRYFQCRKNRGVFISFHKI 755
BLAST of CAP-Gly domain-containing protein vs. Planmine SMEST
Match: SMESG000015470.1 (SMESG000015470.1) HSP 1 Score: 51.9878 bits (123), Expect = 1.759e-7 Identity = 24/73 (32.88%), Postives = 42/73 (57.53%), Query Frame = 2 Query: 95 QDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISIN 313 + ++VL +N LG +R+ G++N G W+G+EL + G DG++ +RYF+ P +G+ +I IN Sbjct: 453 EGLQVLCNN---ELGIIRYVGAVNFSDGIWVGVELRHKTGKHDGIVLNKRYFLCPPDHGIMVRPSRISVKGIN 522
BLAST of CAP-Gly domain-containing protein vs. Planmine SMEST
Match: SMESG000015465.1 (SMESG000015465.1) HSP 1 Score: 52.373 bits (124), Expect = 1.802e-7 Identity = 24/73 (32.88%), Postives = 42/73 (57.53%), Query Frame = 2 Query: 95 QDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGNSDGMLNGRRYFIVRPGYGLFTTSDKIRFISIN 313 + ++VL +N LG +R+ G++N G W+G+EL + G DG++ +RYF+ P +G+ +I IN Sbjct: 597 EGLQVLCNN---ELGIIRYVGAVNFSDGIWVGVELRHKTGKHDGIVLNKRYFLCPPDHGIMVRPSRISVKGIN 666 The following BLAST results are available for this feature:
BLAST of CAP-Gly domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of CAP-Gly domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of CAP-Gly domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of CAP-Gly domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000144 ID=SMED30000144|Name=CAP-Gly domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=798bpback to top protein sequence of SMED30000144-orf-1 >SMED30000144-orf-1 ID=SMED30000144-orf-1|Name=SMED30000144-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=240bp MVLFQNIQIGQDVEVLRSNGTISLGKVRFKGSINGRKGDWIGIELASQIGback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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