Leucine-rich repeat-containing protein 40
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30000082 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Match: LRRC40 (leucine rich repeat containing 40 [Source:HGNC Symbol;Acc:HGNC:26004]) HSP 1 Score: 300.442 bits (768), Expect = 1.294e-92 Identity = 207/589 (35.14%), Postives = 341/589 (57.89%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDE--KSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMR-----NTQEEEPKSFGPGLQALNRATIKD--DSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
+ LLK A+KSG LNL+ RN+SE+P V++IN+ ++ +E +++SF ++ WW+ LTKLI++ N + ++ D+ LL L+ LDI DN ++SLP +I L L+ N++ NK++ LP++I N L+ L +N L + +G LSNL +DLS+N ++ P + L L +L+LS N++ S+P + R+ L+ LD + N L+T + ++L N+L P LKE+ + N I + +HL + +I L + +NK+ +P+EI +L SL LDLSNND+ +LP SLG++ LK L+++GNP R ++R II+ G + +YLR + +Q E L + +R I +D +D +AT I DE+ +++ S V IN + N+ P ++ + + + D+DLS N++S + + L L LD+ N + LPE + + L LS+N +P+V+ R+ L+T+++S+ + +D +K+KM+ NL L++ NN + IPPELG C +++L LDGN F+VPR AI+ KGTA+++EYLR RI T
Sbjct: 29 QGLLKAARKSGQLNLSGRNLSEVPQCVWRINV-DIPEEANQNLSFGATER-WWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLI-----------PDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRF-KMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIPT 602
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Match: LRRD1 (leucine rich repeats and death domain containing 1 [Source:HGNC Symbol;Acc:HGNC:34300]) HSP 1 Score: 125.946 bits (315), Expect = 2.381e-29 Identity = 165/595 (27.73%), Postives = 277/595 (46.55%), Query Frame = 2
Query: 164 SLNLANRNISEIPNSVYKINMPN---VNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSIT---NLTQLKYFN--------------------INKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFS---EGF----------------------CAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNL-ADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSY--NDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGN 1783
++NL + + E P + KI ++ + +F+ +DS D + L L L N +S + +I LL L L++S N+IS +P I+ N+ QL ++N + KNK++ +PD + + L+ L+ YN L + PK L L L +DL+ N IS P +I EL L L + +N++T + + +L ++ L L+ NKL+ S E F CA + + L N+LT+ P + NL+++ + N + +IT D +S + NIC+L + N I D+P EI + ++LS N + PL L ++ L LS++GN + I S K+ L + ++ N+ I + F +L+ + K + + A +S+ I SLH + L NKF FP ++ ++LQ LDLS NQ+ ++ + I +L G+++L+ S N+ P L ++ L +S +P +S M L+ L +S+ + I I L NL L+ NN IS +PP L ++ LNL GN
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSG--DLLGLEILSLQENGLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKIT-DCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEIPVDISFS-----KQLLHLELSE--------------NKLLIFSEH-FCSLINLKYLDLGKNQIKKIPASISNMI--SLHVLI-----LCCNKFETFPRELCTL-ENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIP-RNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGN 707 HSP 2 Score: 104.76 bits (260), Expect = 1.403e-22 Identity = 92/294 (31.29%), Postives = 157/294 (53.40%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSI-INSGAD--SIKRYLRMRNTQEEE 1165
L L + N IS I DIS +L HL++S+N + + +L LKY ++ KN+I+K+P I N + L L N ++ P+ L L NL ++DLS N++ + I L + KL+ S NQ P L +L +L+ L++SQ K + +LT+ P L N LKE+ +++N I EI ++ + ++ N+ +L NN+I+ +P + L L L+LS N++ ALP ++ ++ LK ++ D NP +L+ + I G +I RYL+ + ++E+
Sbjct: 489 LYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGR------------------KLTRLPGELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNIFSLKEINFDDNP--LLRPPVEICKGKQLYTIARYLQRADERDEK 761 HSP 3 Score: 92.8189 bits (229), Expect = 8.667e-19 Identity = 92/322 (28.57%), Postives = 157/322 (48.76%), Query Frame = 2
Query: 167 LNLANRNISEIPNSVYKIN---MPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITK--DHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIIN 1108
L+L++ ++E+P ++K+N +VN + S + + L + N I+ + +I K+ +++S N I P + L L Y ++N N I ++P I +L L S N L + L NL +DL N+I + P I+ + L L L N+ + P L L NLQ+LDLS+N+LQ S C + ++ N+ FPI L ++L++++++ ++T+ LS + + L I+NN I +IP I L +L +L NN + LP SL + L+ L++ GN L +I N
Sbjct: 400 LSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLNN---ICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYN 718 HSP 4 Score: 54.299 bits (129), Expect = 8.149e-7 Identity = 89/363 (24.52%), Postives = 165/363 (45.45%), Query Frame = 2
Query: 587 LSHNEISEFPPQINE-----LYLLT---KLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFS---EGFCAPVHQIWLHVNRLTKFP--IVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMS 1636
LSH + E PQ++E L L ++L + P + ++ ++ L L +N+++TF G + + L N L+ P I L + NL+ ++++HN IS I K+ +S++ NI L NN I + P ++ L +L L L N ++ +P +L ++ L+ L+++ N +++ F P L +L+ S + +L+ + + L L+ EI L +K + L NK + KI F + L+ L L N + +P IS + L L +S NK+ LP+ + +++ L ++ N++ I D +S +N + +L S
Sbjct: 117 LSHETVGEVSPQVSEENQKQLGLGADNFTVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLPSEIQLLH-NLRILNVSHNHISHIPKE-ISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKAL-----------------------CFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLL---KIKELQLADNKLEVISHKIENFRE-LRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVK-ITDCISHLNNICSLEFS 449
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Match: LRRD1 (leucine rich repeats and death domain containing 1 [Source:HGNC Symbol;Acc:HGNC:34300]) HSP 1 Score: 125.946 bits (315), Expect = 2.381e-29 Identity = 165/595 (27.73%), Postives = 277/595 (46.55%), Query Frame = 2
Query: 164 SLNLANRNISEIPNSVYKINMPN---VNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSIT---NLTQLKYFN--------------------INKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFS---EGF----------------------CAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNL-ADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSY--NDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGN 1783
++NL + + E P + KI ++ + +F+ +DS D + L L L N +S + +I LL L L++S N+IS +P I+ N+ QL ++N + KNK++ +PD + + L+ L+ YN L + PK L L L +DL+ N IS P +I EL L L + +N++T + + +L ++ L L+ NKL+ S E F CA + + L N+LT+ P + NL+++ + N + +IT D +S + NIC+L + N I D+P EI + ++LS N + PL L ++ L LS++GN + I S K+ L + ++ N+ I + F +L+ + K + + A +S+ I SLH + L NKF FP ++ ++LQ LDLS NQ+ ++ + I +L G+++L+ S N+ P L ++ L +S +P +S M L+ L +S+ + I I L NL L+ NN IS +PP L ++ LNL GN
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSG--DLLGLEILSLQENGLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKIT-DCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEIPVDISFS-----KQLLHLELSE--------------NKLLIFSEH-FCSLINLKYLDLGKNQIKKIPASISNMI--SLHVLI-----LCCNKFETFPRELCTL-ENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIP-RNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGN 707 HSP 2 Score: 104.76 bits (260), Expect = 1.403e-22 Identity = 92/294 (31.29%), Postives = 157/294 (53.40%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSI-INSGAD--SIKRYLRMRNTQEEE 1165
L L + N IS I DIS +L HL++S+N + + +L LKY ++ KN+I+K+P I N + L L N ++ P+ L L NL ++DLS N++ + I L + KL+ S NQ P L +L +L+ L++SQ K + +LT+ P L N LKE+ +++N I EI ++ + ++ N+ +L NN+I+ +P + L L L+LS N++ ALP ++ ++ LK ++ D NP +L+ + I G +I RYL+ + ++E+
Sbjct: 489 LYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGR------------------KLTRLPGELSNMTQLKELDISNNAIREIPRN-IGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNIFSLKEINFDDNP--LLRPPVEICKGKQLYTIARYLQRADERDEK 761 HSP 3 Score: 92.8189 bits (229), Expect = 8.667e-19 Identity = 92/322 (28.57%), Postives = 157/322 (48.76%), Query Frame = 2
Query: 167 LNLANRNISEIPNSVYKIN---MPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITK--DHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIIN 1108
L+L++ ++E+P ++K+N +VN + S + + L + N I+ + +I K+ +++S N I P + L L Y ++N N I ++P I +L L S N L + L NL +DL N+I + P I+ + L L L N+ + P L L NLQ+LDLS+N+LQ S C + ++ N+ FPI L ++L++++++ ++T+ LS + + L I+NN I +IP I L +L +L NN + LP SL + L+ L++ GN L +I N
Sbjct: 400 LSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLNN---ICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYN 718 HSP 4 Score: 54.299 bits (129), Expect = 8.149e-7 Identity = 89/363 (24.52%), Postives = 165/363 (45.45%), Query Frame = 2
Query: 587 LSHNEISEFPPQINE-----LYLLT---KLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFS---EGFCAPVHQIWLHVNRLTKFP--IVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMS 1636
LSH + E PQ++E L L ++L + P + ++ ++ L L +N+++TF G + + L N L+ P I L + NL+ ++++HN IS I K+ +S++ NI L NN I + P ++ L +L L L N ++ +P +L ++ L+ L+++ N +++ F P L +L+ S + +L+ + + L L+ EI L +K + L NK + KI F + L+ L L N + +P IS + L L +S NK+ LP+ + +++ L ++ N++ I D +S +N + +L S
Sbjct: 117 LSHETVGEVSPQVSEENQKQLGLGADNFTVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLPSEIQLLH-NLRILNVSHNHISHIPKE-ISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKAL-----------------------CFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLL---KIKELQLADNKLEVISHKIENFRE-LRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVK-ITDCISHLNNICSLEFS 449
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Match: MFHAS1 (malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]) HSP 1 Score: 112.849 bits (281), Expect = 5.214e-25 Identity = 88/308 (28.57%), Postives = 147/308 (47.73%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDK-LSHLDISDNNISSL-PDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFP------------------------IVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRY 1135
L L+L N + + ++ L L+ LD+S N +++L + ++ L +L+ N++ N++ LP Q+ L+ L S+N L LP L+CLS L +D+ HN+++ FP Q+ +L L +LD+S N++ +P + L L+IL LS +L T GFC A + + L N L P +LP L+E+ L+ N ++ + +S + + TL + NN+I +P+ I LT L L L N + LP G + ++ I NP + G I Y
Sbjct: 89 LRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVP-SLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395 HSP 2 Score: 80.1073 bits (196), Expect = 7.205e-15 Identity = 82/319 (25.71%), Postives = 149/319 (46.71%), Query Frame = 2
Query: 701 LHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLP-----NKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEIL--NSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMN 1612
L +++ L+L N L+ EG + + + + V R +F + P +L E+ ++HN ++ + + +S + + L +++N++ +P ++ L L LD+S N + LP SL + +L+ L +D N R ++ A L + + + AL I SG G + F LA L +L N L ++P +K +NL+ N F FP + + L++L LS NQ++ +P+ IS L L L + N+IR LP+S+ E++ L +L N I +PD +++
Sbjct: 62 LGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVA------LEELDVSSNRLRGLPEDISALRALKILWLSG-------AELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLA-GLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIA-VLPDHFGQLS 365 HSP 3 Score: 64.3142 bits (155), Expect = 5.473e-10 Identity = 58/228 (25.44%), Postives = 95/228 (41.67%), Query Frame = 2
Query: 290 VFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFP-IVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISI 970
V L +L +++N + + +DIS L L L +S + +LP L L+ ++ N +Q LP Q +CL L +++LS N EFP + L L +L LS NQ+TS+P + L L L WL NR+ P ++ L+E+ L N I+ + DH ++ + I +N + P E+ +
Sbjct: 204 VALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQ-----------------------FSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTL---------------------WLDNNRIRYLPDSIVELTGLEELVLQGNQIA-VLPDHFGQLSRVGLWKIKDNPLIQPPYEVCM 386 HSP 4 Score: 52.7582 bits (125), Expect = 2.572e-6 Identity = 44/153 (28.76%), Postives = 81/153 (52.94%), Query Frame = 2
Query: 1343 INLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCE--KIKSLNLDGNCFKV 1795
++++ N+ + ++ L+ L+LS+NQ+ LP + +L+ L LD+SFN++ LP+SLS +S L + +N + P + ++ L+ L +S L + E I L L++L +S + +P G CE ++SL LD N +
Sbjct: 116 LDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQL-TAFPRQLLQLVALEELDVSSNRLRGLP-EDISALRALKILWLSGAELGTLP--AGFCELASLESLMLDNNGLQA 264
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Match: MFHAS1 (malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]) HSP 1 Score: 112.464 bits (280), Expect = 5.446e-25 Identity = 88/308 (28.57%), Postives = 147/308 (47.73%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDK-LSHLDISDNNISSL-PDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFP------------------------IVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRY 1135
L L+L N + + ++ L L+ LD+S N +++L + ++ L +L+ N++ N++ LP Q+ L+ L S+N L LP L+CLS L +D+ HN+++ FP Q+ +L L +LD+S N++ +P + L L+IL LS +L T GFC A + + L N L P +LP L+E+ L+ N ++ + +S + + TL + NN+I +P+ I LT L L L N + LP G + ++ I NP + G I Y
Sbjct: 89 LRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVP-SLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395 HSP 2 Score: 80.1073 bits (196), Expect = 9.010e-15 Identity = 82/319 (25.71%), Postives = 149/319 (46.71%), Query Frame = 2
Query: 701 LHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLP-----NKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEIL--NSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMN 1612
L +++ L+L N L+ EG + + + + V R +F + P +L E+ ++HN ++ + + +S + + L +++N++ +P ++ L L LD+S N + LP SL + +L+ L +D N R ++ A L + + + AL I SG G + F LA L +L N L ++P +K +NL+ N F FP + + L++L LS NQ++ +P+ IS L L L + N+IR LP+S+ E++ L +L N I +PD +++
Sbjct: 62 LGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVA------LEELDVSSNRLRGLPEDISALRALKILWLSG-------AELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLA-GLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIA-VLPDHFGQLS 365 HSP 3 Score: 64.3142 bits (155), Expect = 5.861e-10 Identity = 58/228 (25.44%), Postives = 95/228 (41.67%), Query Frame = 2
Query: 290 VFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFP-IVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISI 970
V L +L +++N + + +DIS L L L +S + +LP L L+ ++ N +Q LP Q +CL L +++LS N EFP + L L +L LS NQ+TS+P + L L L WL NR+ P ++ L+E+ L N I+ + DH ++ + I +N + P E+ +
Sbjct: 204 VALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQ-----------------------FSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTL---------------------WLDNNRIRYLPDSIVELTGLEELVLQGNQIA-VLPDHFGQLSRVGLWKIKDNPLIQPPYEVCM 386 HSP 4 Score: 52.373 bits (124), Expect = 2.801e-6 Identity = 44/153 (28.76%), Postives = 81/153 (52.94%), Query Frame = 2
Query: 1343 INLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCE--KIKSLNLDGNCFKV 1795
++++ N+ + ++ L+ L+LS+NQ+ LP + +L+ L LD+SFN++ LP+SLS +S L + +N + P + ++ L+ L +S L + E I L L++L +S + +P G CE ++SL LD N +
Sbjct: 116 LDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQL-TAFPRQLLQLVALEELDVSSNRLRGLP-EDISALRALKILWLSGAELGTLP--AGFCELASLESLMLDNNGLQA 264
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Match: soc-2 (Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]) HSP 1 Score: 118.627 bits (296), Expect = 7.179e-28 Identity = 139/511 (27.20%), Postives = 246/511 (48.14%), Query Frame = 2
Query: 371 HLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPG--LQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR 1849
LD+S I+S+P I LTQL + KNK+ LP +I + L+ L S N L SLP L L +L +DL HN+++E P I ++ L L L YN+I ++ + L L++LD+ +NK++ G + + N LT+ P + + +L ++ L HN +SE+ + K+ N+ + I NKI IP E L +QL+ ++ N ++L +++ ++ + N E +F G Q ++ TI + I + + +AT + KL+ + N L S+P + +NL+ N+ + P I + + L+ L LSNNQ+ +LPN I +L+ LR LD+ N++ +P + + L+ + N I T+P + + LQ L + LT I E+I L +L+ L +++N+ + P EL LC+ ++ ++++ + P I + G + V++YL+
Sbjct: 67 RLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYS-IGKLVNLVRIGIRYNKIRCIPSE-----------------------LESCQQLEEFIVESNHLQLLPPNLL-----TMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKE---------NELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN-LEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIL-TLPRSIGNLCSLQDLRLGENNLTAIP-EEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLK 536 HSP 2 Score: 98.5969 bits (244), Expect = 2.748e-21 Identity = 101/401 (25.19%), Postives = 170/401 (42.39%), Query Frame = 2
Query: 74 DNSLFIDIGNSESQNNKAFENLLKQAKKSGS-----LNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDS----------------------------------------------ITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA---PVHQIWLHVNRLTKFPIVLPNKNLKEIS--LTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIIN 1108
D + F+ N + A ++LLK+ K L+L++ I+ IP+ + ++ LT+L L N ++ + +I L L L +S+N ++SLPDS I NL++LK ++ +NKI++LP I L SYN L +P+ + +LT +DL HN++SE P I +L L ++ + YN+I +P LE L+ + N LQ +H + L N LT FP P + + ++ + HN IS+I SK + L + N++ +P ++ TS++ L+LS N +K LP + + L+ L + N + L I N
Sbjct: 32 DRAYFLRQKNMRNNKGHAEKDLLKEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQ-----------------------LTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGN 409 HSP 3 Score: 58.9214 bits (141), Expect = 8.516e-9 Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 2
Query: 320 NSISFISKDI-SLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE 757
N IS I I S +L+ L++ +N + SLP + + T + N++ N+++ LP+ IE + L+ L S N LK LP + L+ L +DL NE+ P +I L LTKL + N+I ++P ++ L +LQ L L +N L E
Sbjct: 328 NQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPE 474 HSP 4 Score: 55.8398 bits (133), Expect = 7.860e-8 Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQN 736
LTKL L N + + D+ ++ L++S N + LP+ I L L+ ++ N+++KLP+QI N +L+ L N L+++P + L +LT + + N+I P I L L L L N +T++P + L +L+ L L+ N
Sbjct: 344 LTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN 490
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Match: soc-2 (Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]) HSP 1 Score: 118.627 bits (296), Expect = 7.441e-28 Identity = 139/511 (27.20%), Postives = 246/511 (48.14%), Query Frame = 2
Query: 371 HLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPG--LQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR 1849
LD+S I+S+P I LTQL + KNK+ LP +I + L+ L S N L SLP L L +L +DL HN+++E P I ++ L L L YN+I ++ + L L++LD+ +NK++ G + + N LT+ P + + +L ++ L HN +SE+ + K+ N+ + I NKI IP E L +QL+ ++ N ++L +++ ++ + N E +F G Q ++ TI + I + + +AT + KL+ + N L S+P + +NL+ N+ + P I + + L+ L LSNNQ+ +LPN I +L+ LR LD+ N++ +P + + L+ + N I T+P + + LQ L + LT I E+I L +L+ L +++N+ + P EL LC+ ++ ++++ + P I + G + V++YL+
Sbjct: 76 RLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYS-IGKLVNLVRIGIRYNKIRCIPSE-----------------------LESCQQLEEFIVESNHLQLLPPNLL-----TMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKE---------NELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN-LEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIL-TLPRSIGNLCSLQDLRLGENNLTAIP-EEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLK 545 HSP 2 Score: 98.5969 bits (244), Expect = 2.349e-21 Identity = 101/401 (25.19%), Postives = 170/401 (42.39%), Query Frame = 2
Query: 74 DNSLFIDIGNSESQNNKAFENLLKQAKKSGS-----LNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDS----------------------------------------------ITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA---PVHQIWLHVNRLTKFPIVLPNKNLKEIS--LTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIIN 1108
D + F+ N + A ++LLK+ K L+L++ I+ IP+ + ++ LT+L L N ++ + +I L L L +S+N ++SLPDS I NL++LK ++ +NKI++LP I L SYN L +P+ + +LT +DL HN++SE P I +L L ++ + YN+I +P LE L+ + N LQ +H + L N LT FP P + + ++ + HN IS+I SK + L + N++ +P ++ TS++ L+LS N +K LP + + L+ L + N + L I N
Sbjct: 41 DRAYFLRQKNMRNNKGHAEKDLLKEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQ-----------------------LTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGN 418 HSP 3 Score: 58.9214 bits (141), Expect = 8.178e-9 Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 2
Query: 320 NSISFISKDI-SLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE 757
N IS I I S +L+ L++ +N + SLP + + T + N++ N+++ LP+ IE + L+ L S N LK LP + L+ L +DL NE+ P +I L LTKL + N+I ++P ++ L +LQ L L +N L E
Sbjct: 337 NQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPE 483 HSP 4 Score: 55.8398 bits (133), Expect = 7.285e-8 Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQN 736
LTKL L N + + D+ ++ L++S N + LP+ I L L+ ++ N+++KLP+QI N +L+ L N L+++P + L +LT + + N+I P I L L L L N +T++P + L +L+ L L+ N
Sbjct: 353 LTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN 499
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Match: soc-2 (Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]) HSP 1 Score: 118.242 bits (295), Expect = 1.167e-27 Identity = 139/511 (27.20%), Postives = 246/511 (48.14%), Query Frame = 2
Query: 371 HLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPG--LQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR 1849
LD+S I+S+P I LTQL + KNK+ LP +I + L+ L S N L SLP L L +L +DL HN+++E P I ++ L L L YN+I ++ + L L++LD+ +NK++ G + + N LT+ P + + +L ++ L HN +SE+ + K+ N+ + I NKI IP E L +QL+ ++ N ++L +++ ++ + N E +F G Q ++ TI + I + + +AT + KL+ + N L S+P + +NL+ N+ + P I + + L+ L LSNNQ+ +LPN I +L+ LR LD+ N++ +P + + L+ + N I T+P + + LQ L + LT I E+I L +L+ L +++N+ + P EL LC+ ++ ++++ + P I + G + V++YL+
Sbjct: 77 RLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYS-IGKLVNLVRIGIRYNKIRCIPSE-----------------------LESCQQLEEFIVESNHLQLLPPNLL-----TMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKE---------NELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN-LEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIL-TLPRSIGNLCSLQDLRLGENNLTAIP-EEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLK 546 HSP 2 Score: 97.8265 bits (242), Expect = 4.347e-21 Identity = 88/322 (27.33%), Postives = 143/322 (44.41%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDS----------------------------------------------ITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA---PVHQIWLHVNRLTKFPIVLPNKNLKEIS--LTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIIN 1108
LT+L L N ++ + +I L L L +S+N ++SLPDS I NL++LK ++ +NKI++LP I L SYN L +P+ + +LT +DL HN++SE P I +L L ++ + YN+I +P LE L+ + N LQ +H + L N LT FP P + + ++ + HN IS+I SK + L + N++ +P ++ TS++ L+LS N +K LP + + L+ L + N + L I N
Sbjct: 98 LTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGN 419 HSP 3 Score: 58.5362 bits (140), Expect = 9.651e-9 Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 2
Query: 320 NSISFISKDI-SLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE 757
N IS I I S +L+ L++ +N + SLP + + T + N++ N+++ LP+ IE + L+ L S N LK LP + L+ L +DL NE+ P +I L LTKL + N+I ++P ++ L +LQ L L +N L E
Sbjct: 338 NQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPE 484 HSP 4 Score: 55.8398 bits (133), Expect = 8.519e-8 Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQN 736
LTKL L N + + D+ ++ L++S N + LP+ I L L+ ++ N+++KLP+QI N +L+ L N L+++P + L +LT + + N+I P I L L L L N +T++P + L +L+ L L+ N
Sbjct: 354 LTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN 500
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Match: soc-2 (Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]) HSP 1 Score: 118.242 bits (295), Expect = 1.167e-27 Identity = 139/511 (27.20%), Postives = 246/511 (48.14%), Query Frame = 2
Query: 371 HLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPG--LQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR 1849
LD+S I+S+P I LTQL + KNK+ LP +I + L+ L S N L SLP L L +L +DL HN+++E P I ++ L L L YN+I ++ + L L++LD+ +NK++ G + + N LT+ P + + +L ++ L HN +SE+ + K+ N+ + I NKI IP E L +QL+ ++ N ++L +++ ++ + N E +F G Q ++ TI + I + + +AT + KL+ + N L S+P + +NL+ N+ + P I + + L+ L LSNNQ+ +LPN I +L+ LR LD+ N++ +P + + L+ + N I T+P + + LQ L + LT I E+I L +L+ L +++N+ + P EL LC+ ++ ++++ + P I + G + V++YL+
Sbjct: 77 RLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYS-IGKLVNLVRIGIRYNKIRCIPSE-----------------------LESCQQLEEFIVESNHLQLLPPNLL-----TMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKE---------NELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN-LEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIL-TLPRSIGNLCSLQDLRLGENNLTAIP-EEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLK 546 HSP 2 Score: 97.8265 bits (242), Expect = 4.347e-21 Identity = 88/322 (27.33%), Postives = 143/322 (44.41%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDS----------------------------------------------ITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA---PVHQIWLHVNRLTKFPIVLPNKNLKEIS--LTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIIN 1108
LT+L L N ++ + +I L L L +S+N ++SLPDS I NL++LK ++ +NKI++LP I L SYN L +P+ + +LT +DL HN++SE P I +L L ++ + YN+I +P LE L+ + N LQ +H + L N LT FP P + + ++ + HN IS+I SK + L + N++ +P ++ TS++ L+LS N +K LP + + L+ L + N + L I N
Sbjct: 98 LTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGN 419 HSP 3 Score: 58.5362 bits (140), Expect = 9.651e-9 Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 2
Query: 320 NSISFISKDI-SLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE 757
N IS I I S +L+ L++ +N + SLP + + T + N++ N+++ LP+ IE + L+ L S N LK LP + L+ L +DL NE+ P +I L LTKL + N+I ++P ++ L +LQ L L +N L E
Sbjct: 338 NQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPE 484 HSP 4 Score: 55.8398 bits (133), Expect = 8.519e-8 Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQN 736
LTKL L N + + D+ ++ L++S N + LP+ I L L+ ++ N+++KLP+QI N +L+ L N L+++P + L +LT + + N+I P I L L L L N +T++P + L +L+ L L+ N
Sbjct: 354 LTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN 500
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Match: soc-2 (Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]) HSP 1 Score: 117.857 bits (294), Expect = 1.989e-27 Identity = 139/511 (27.20%), Postives = 246/511 (48.14%), Query Frame = 2
Query: 371 HLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPG--LQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR 1849
LD+S I+S+P I LTQL + KNK+ LP +I + L+ L S N L SLP L L +L +DL HN+++E P I ++ L L L YN+I ++ + L L++LD+ +NK++ G + + N LT+ P + + +L ++ L HN +SE+ + K+ N+ + I NKI IP E L +QL+ ++ N ++L +++ ++ + N E +F G Q ++ TI + I + + +AT + KL+ + N L S+P + +NL+ N+ + P I + + L+ L LSNNQ+ +LPN I +L+ LR LD+ N++ +P + + L+ + N I T+P + + LQ L + LT I E+I L +L+ L +++N+ + P EL LC+ ++ ++++ + P I + G + V++YL+
Sbjct: 149 RLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYS-IGKLVNLVRIGIRYNKIRCIPSE-----------------------LESCQQLEEFIVESNHLQLLPPNLL-----TMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKE---------NELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN-LEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIL-TLPRSIGNLCSLQDLRLGENNLTAIP-EEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLK 618 HSP 2 Score: 98.9821 bits (245), Expect = 2.244e-21 Identity = 101/401 (25.19%), Postives = 170/401 (42.39%), Query Frame = 2
Query: 74 DNSLFIDIGNSESQNNKAFENLLKQAKKSGS-----LNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDS----------------------------------------------ITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA---PVHQIWLHVNRLTKFPIVLPNKNLKEIS--LTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIIN 1108
D + F+ N + A ++LLK+ K L+L++ I+ IP+ + ++ LT+L L N ++ + +I L L L +S+N ++SLPDS I NL++LK ++ +NKI++LP I L SYN L +P+ + +LT +DL HN++SE P I +L L ++ + YN+I +P LE L+ + N LQ +H + L N LT FP P + + ++ + HN IS+I SK + L + N++ +P ++ TS++ L+LS N +K LP + + L+ L + N + L I N
Sbjct: 114 DRAYFLRQKNMRNNKGHAEKDLLKEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQ-----------------------LTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGN 491 HSP 3 Score: 59.3066 bits (142), Expect = 6.206e-9 Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 2
Query: 320 NSISFISKDI-SLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE 757
N IS I I S +L+ L++ +N + SLP + + T + N++ N+++ LP+ IE + L+ L S N LK LP + L+ L +DL NE+ P +I L LTKL + N+I ++P ++ L +LQ L L +N L E
Sbjct: 410 NQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPE 556 HSP 4 Score: 56.225 bits (134), Expect = 5.780e-8 Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQN 736
LTKL L N + + D+ ++ L++S N + LP+ I L L+ ++ N+++KLP+QI N +L+ L N L+++P + L +LT + + N+I P I L L L L N +T++P + L +L+ L L+ N
Sbjct: 426 LTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN 572
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Match: f-cup (gene:FBgn0028487 transcript:FBtr0082847) HSP 1 Score: 229.18 bits (583), Expect = 8.110e-66 Identity = 181/596 (30.37%), Postives = 301/596 (50.50%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQ----SDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFG-------PGLQALNRATIKDDSG-----FIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
+ L K A+KSG+LNL+N+ ++ +P +Y IN + D K+++ EQ + +WW+ V L L L++N+++ IS I L L+ L + DN + LP I L +L N++ NK+ +LP + + EL+ L+ SYN L ++ L L +D HN I P I L LT L L YN I +P L + +LQ +DL N L + E G + ++L N + + P N+ L E+ ++N I I K S +P++ L + +NKI ++P+E+ +L +L+ LD+SNN + LP++L + L L ++GNP + ++R I+ G I + L R + + + G G+ + D G F D+ LR T + ++ L + D++ V ++ N+ S P + D + +L LSNN I +P IS + + L++S N + LP ++ L ++ N IP+ V + L+ L+ S + +++ ++ + L L++ NN I +PP LG I L L GN F+ PR I+ KGT ++M YLR RI T
Sbjct: 57 QELWKLARKSGTLNLSNKALARVPKRLYDINEADA-DSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFP-CIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIPT 650
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Match: f-cup (gene:FBgn0028487 transcript:FBtr0082846) HSP 1 Score: 228.794 bits (582), Expect = 2.337e-65 Identity = 181/596 (30.37%), Postives = 301/596 (50.50%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQ----SDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFG-------PGLQALNRATIKDDSG-----FIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
+ L K A+KSG+LNL+N+ ++ +P +Y IN + D K+++ EQ + +WW+ V L L L++N+++ IS I L L+ L + DN + LP I L +L N++ NK+ +LP + + EL+ L+ SYN L ++ L L +D HN I P I L LT L L YN I +P L + +LQ +DL N L + E G + ++L N + + P N+ L E+ ++N I I K S +P++ L + +NKI ++P+E+ +L +L+ LD+SNN + LP++L + L L ++GNP + ++R I+ G I + L R + + + G G+ + D G F D+ LR T + ++ L + D++ V ++ N+ S P + D + +L LSNN I +P IS + + L++S N + LP ++ L ++ N IP+ V + L+ L+ S + +++ ++ + L L++ NN I +PP LG I L L GN F+ PR I+ KGT ++M YLR RI T
Sbjct: 100 QELWKLARKSGTLNLSNKALARVPKRLYDINEADA-DSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFP-CIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIPT 693
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Match: f-cup (gene:FBgn0028487 transcript:FBtr0112939) HSP 1 Score: 208.379 bits (529), Expect = 1.996e-58 Identity = 171/575 (29.74%), Postives = 285/575 (49.57%), Query Frame = 2
Query: 194 EIPNSVYKINMPNVNDEKSISFEQ----SDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFG-------PGLQALNRATIKDDSG-----FIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
++P +Y IN + D K+++ EQ + +WW+ V L L L++N+++ IS I L L+ L + DN + LP I L +L N++ NK+ +LP + + EL+ L+ SYN L ++ L L +D HN I P I L LT L L YN I +P L + +LQ +DL N L + E G + ++L N + + P N+ L E+ ++N I I K S +P++ L + +NKI ++P+E+ +L +L+ LD+SNN + LP++L + L L ++GNP + ++R I+ G I + L R + + + G G+ + D G F D+ LR T + ++ L + D++ V ++ N+ S P + D + +L LSNN I +P IS + + L++S N + LP ++ L ++ N IP+ V + L+ L+ S + +++ ++ + L L++ NN I +PP LG I L L GN F+ PR I+ KGT ++M YLR RI T
Sbjct: 48 DLPKRLYDINEADA-DSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFP-CIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIPT 620
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Match: f-cup (gene:FBgn0028487 transcript:FBtr0334528) HSP 1 Score: 166.007 bits (419), Expect = 1.099e-43 Identity = 116/356 (32.58%), Postives = 193/356 (54.21%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQ----SDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFG 1180
+ L K A+KSG+LNL+N+ ++ +P +Y IN + D K+++ EQ + +WW+ V L L L++N+++ IS I L L+ L + DN + LP I L +L N++ NK+ +LP + + EL+ L+ SYN L ++ L L +D HN I P I L LT L L YN I +P L + +LQ +DL N L + E G + ++L N + + P N+ L E+ ++N I I K S +P++ L + +NKI ++P+E+ +L +L+ LD+SNN + LP++L + L L ++GNP + ++R I+ G I + L R + + + G
Sbjct: 57 QELWKLARKSGTLNLSNKALARVPKRLYDINEADA-DSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKEEGGG 411 HSP 2 Score: 51.2174 bits (121), Expect = 2.618e-6 Identity = 94/344 (27.33%), Postives = 155/344 (45.06%), Query Frame = 2
Query: 641 LTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADL----SDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTII 1657
L LDLS N +T + +E L +L +L L H N L + P + + L ++++HN +S++ + S +P + L I+ N+ ++ +IS L L LD +N++++LP +G + +L L + N + L ++N MR+ Q+ + L + ++ +D G LR + L ++ +L +E LN LH+ + N I P + L+ LDL +N+I+ELP+ + L L RLD+S N I VLP +LS L+H I S GN I + R + LQ CG T I
Sbjct: 115 LNNLDLSSNTLTHISPKIENLQSLTVLTL---------------------HDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYS-LPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVN-----------MRSLQKID-------LMHNDLTSLPEDMGL-----LRKLDCLYLQHNDILELPEFEGNEALNELHA--------SNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSS---LAHLI-SLQVEGNPIKTI--RRDILQ------CGTTRI 393
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Match: f-cup (gene:FBgn0028487 transcript:FBtr0334527) HSP 1 Score: 167.162 bits (422), Expect = 2.885e-43 Identity = 116/356 (32.58%), Postives = 193/356 (54.21%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQ----SDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFG 1180
+ L K A+KSG+LNL+N+ ++ +P +Y IN + D K+++ EQ + +WW+ V L L L++N+++ IS I L L+ L + DN + LP I L +L N++ NK+ +LP + + EL+ L+ SYN L ++ L L +D HN I P I L LT L L YN I +P L + +LQ +DL N L + E G + ++L N + + P N+ L E+ ++N I I K S +P++ L + +NKI ++P+E+ +L +L+ LD+SNN + LP++L + L L ++GNP + ++R I+ G I + L R + + + G
Sbjct: 57 QELWKLARKSGTLNLSNKALARVPKRLYDINEADA-DSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKEEGGG 411 HSP 2 Score: 72.0182 bits (175), Expect = 1.144e-12 Identity = 60/206 (29.13%), Postives = 100/206 (48.54%), Query Frame = 2
Query: 1247 LRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
LR T + ++ L + D++ V ++ N+ S P + D + +L LSNN I +P IS + + L++S N + LP ++ L ++ N IP+ V + L+ L+ S + +++ ++ + L L++ NN I +PP LG I L L GN F+ PR I+ KGT ++M YLR RI T
Sbjct: 555 LRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFP-CIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIPT 759 HSP 3 Score: 51.6026 bits (122), Expect = 2.444e-6 Identity = 94/343 (27.41%), Postives = 154/343 (44.90%), Query Frame = 2
Query: 641 LTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADL----SDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTII 1657
L LDLS N +T + +E L +L +L L N L + +L K L ++++HN +S++ + S +P + L I+ N+ ++ +IS L L LD +N++++LP +G + +L L + N + L ++N MR+ Q+ + L + ++ +D G LR + L ++ +L +E LN LH+ + N I P + L+ LDL +N+I+ELP+ + L L RLD+S N I VLP +L S L+H I S GN I + R + LQ CG T I
Sbjct: 115 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPP-----------EIGKLEK---------LVRLNVSHNKLSQLPRAMYS-LPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVN-----------MRSLQKID-------LMHNDLTSLPEDMGL-----LRKLDCLYLQHNDILELPEFEGNEALNELHA--------SNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTL---SSLAHLI-SLQVEGNPIKTI--RRDILQ------CGTTRI 393
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:334130]) HSP 1 Score: 314.694 bits (805), Expect = 3.364e-98 Identity = 205/586 (34.98%), Postives = 335/586 (57.17%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKS-ISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQ------EEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
LLK A+KSG LNL+ R ++E+P SV+++N+ + K +SF D WW+ LTKL+L++N + I D+ LL L LDI DN +SSLPDSI +L QL+ ++ NK+ +LP + L+ L N ++ +P+ L L NL +DLS+N + + P + L L KLDLS N++ S+P + ++ NL++LD S+N++++ + Q++L N+L P + K LKE+ +N I + +HL + + L + +NK+ +PEEI++L L LDL+NND+ +LP LG + +LK LS++GNP R ++R ++ G + +YLR R + +EEPK+ A I+ ++ + S + A + D++ +++ PV +N + N+ + P +I D+L D++L N+++ +P L L +D+ N + LP L + L ILS+N + P+V+ R+ L+T+++S + ID ++K LS L L++SNN I +PPELG C +++L LDGN F+ PR AI+ KGT +V+EYLRSRI T
Sbjct: 28 GLLKAARKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDR-WWEQTDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRFLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKT----------AMTFPSQAKINVHAIKTLKTLDYSEKQDASIPDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDLKDTLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRF-KSFPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAVLEYLRSRIPT 601
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:555476]) HSP 1 Score: 119.013 bits (297), Expect = 1.158e-27 Identity = 141/508 (27.76%), Postives = 245/508 (48.23%), Query Frame = 2
Query: 371 HLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIPVK--------GINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDY--EKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR 1849
LD+S +I LP SI LTQL + NK+Q LP ++ L TL+ S N+L SLP L+ L L ++DL HN++ E P + + LT L L +N+IT++ ++ L L +L + +NK++ Q+ + L NL + + HN + + K+ + I L + +N + D+PE I L S++ L L N + A+P SL +L+ L+++ N +L +++S + L RN + P GP Q ++ + I++ RA + KL+ ++ N L S+P+ +NL N+ + P I SL+ L LSNN + +LP I +L LR LD+ NK+ LP ++ + L +L+ N + T+P + + L L + G ++ + E+I L NLE L +++N + P EL LC K+ ++++ P I++ G + ++++L+
Sbjct: 83 RLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIK-----------QLPAEIGELC---------NLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTL-ARNCFQSYPVG-GPS-QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKD---------NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLV-SLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQL-TTLPRGIGHLTNLTYLGL---GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLK 552 HSP 2 Score: 113.235 bits (282), Expect = 9.179e-26 Identity = 127/474 (26.79%), Postives = 227/474 (47.89%), Query Frame = 2
Query: 272 SSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQ-EEEPKSFG--PGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLT 1651
SS + LT+L L +N + + ++ L L L +S+N+++SLPDS+ NL +L+ ++ NK++++P + L TL +N + ++ K + LS LT++ + N+I + P +I EL L LD+++NQ+ +P + + LDL N L E G A ++++ L NRL+ P L + L+E++L +N IS + + LS + N+ +LT+A N P + + +L +ME + I+ PF + R+ + S L M++ Q P FG + LN AT + + + G+V L L++ N L +P ++ ++L NK P +I D LQ L L+NNQ++ LP I L+ L L + N ++ LPE + + L L+ N +++P ++ + L + + +C L+
Sbjct: 96 SSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYP---------VGGPSQFSTIYSL-----NMEHNR---INKIPFGIFSRAKVLSK-------LNMKDNQLTSLPLDFGTWTSMVELNLATNQ-----LTKIPEDICGLVSLEMLTLSN------NLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKD-LQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLS 533 HSP 3 Score: 79.337 bits (194), Expect = 6.223e-15 Identity = 60/193 (31.09%), Postives = 101/193 (52.33%), Query Frame = 2
Query: 164 SLNLANRNISEIPNSVYK----INMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYN-QITSMPFTLERLHNLQILDL 727
SLN+ + I++IP ++ ++ N+ D + S +W V +L L N ++ I +DI L L L +S+N + LP I NL +L+ ++ +NK++ LP++I +LQ L + N L +LP+G+ L+NLT + L N + P +I L L L L+ N + S+PF L L I+ +
Sbjct: 338 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMV---ELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSI 527
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:555476]) HSP 1 Score: 119.013 bits (297), Expect = 1.158e-27 Identity = 141/508 (27.76%), Postives = 245/508 (48.23%), Query Frame = 2
Query: 371 HLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIPVK--------GINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDY--EKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR 1849
LD+S +I LP SI LTQL + NK+Q LP ++ L TL+ S N+L SLP L+ L L ++DL HN++ E P + + LT L L +N+IT++ ++ L L +L + +NK++ Q+ + L NL + + HN + + K+ + I L + +N + D+PE I L S++ L L N + A+P SL +L+ L+++ N +L +++S + L RN + P GP Q ++ + I++ RA + KL+ ++ N L S+P+ +NL N+ + P I SL+ L LSNN + +LP I +L LR LD+ NK+ LP ++ + L +L+ N + T+P + + L L + G ++ + E+I L NLE L +++N + P EL LC K+ ++++ P I++ G + ++++L+
Sbjct: 83 RLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIK-----------QLPAEIGELC---------NLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTL-ARNCFQSYPVG-GPS-QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKD---------NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLV-SLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQL-TTLPRGIGHLTNLTYLGL---GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLK 552 HSP 2 Score: 113.235 bits (282), Expect = 9.179e-26 Identity = 127/474 (26.79%), Postives = 227/474 (47.89%), Query Frame = 2
Query: 272 SSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQ-EEEPKSFG--PGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLT 1651
SS + LT+L L +N + + ++ L L L +S+N+++SLPDS+ NL +L+ ++ NK++++P + L TL +N + ++ K + LS LT++ + N+I + P +I EL L LD+++NQ+ +P + + LDL N L E G A ++++ L NRL+ P L + L+E++L +N IS + + LS + N+ +LT+A N P + + +L +ME + I+ PF + R+ + S L M++ Q P FG + LN AT + + + G+V L L++ N L +P ++ ++L NK P +I D LQ L L+NNQ++ LP I L+ L L + N ++ LPE + + L L+ N +++P ++ + L + + +C L+
Sbjct: 96 SSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYP---------VGGPSQFSTIYSL-----NMEHNR---INKIPFGIFSRAKVLSK-------LNMKDNQLTSLPLDFGTWTSMVELNLATNQ-----LTKIPEDICGLVSLEMLTLSN------NLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKD-LQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLS 533 HSP 3 Score: 79.337 bits (194), Expect = 6.223e-15 Identity = 60/193 (31.09%), Postives = 101/193 (52.33%), Query Frame = 2
Query: 164 SLNLANRNISEIPNSVYK----INMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYN-QITSMPFTLERLHNLQILDL 727
SLN+ + I++IP ++ ++ N+ D + S +W V +L L N ++ I +DI L L L +S+N + LP I NL +L+ ++ +NK++ LP++I +LQ L + N L +LP+G+ L+NLT + L N + P +I L L L L+ N + S+PF L L I+ +
Sbjct: 338 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMV---ELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSI 527
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:555476]) HSP 1 Score: 119.013 bits (297), Expect = 1.158e-27 Identity = 141/508 (27.76%), Postives = 245/508 (48.23%), Query Frame = 2
Query: 371 HLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIPVK--------GINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDY--EKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR 1849
LD+S +I LP SI LTQL + NK+Q LP ++ L TL+ S N+L SLP L+ L L ++DL HN++ E P + + LT L L +N+IT++ ++ L L +L + +NK++ Q+ + L NL + + HN + + K+ + I L + +N + D+PE I L S++ L L N + A+P SL +L+ L+++ N +L +++S + L RN + P GP Q ++ + I++ RA + KL+ ++ N L S+P+ +NL N+ + P I SL+ L LSNN + +LP I +L LR LD+ NK+ LP ++ + L +L+ N + T+P + + L L + G ++ + E+I L NLE L +++N + P EL LC K+ ++++ P I++ G + ++++L+
Sbjct: 83 RLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIK-----------QLPAEIGELC---------NLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTL-ARNCFQSYPVG-GPS-QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKD---------NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLV-SLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQL-TTLPRGIGHLTNLTYLGL---GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLK 552 HSP 2 Score: 113.235 bits (282), Expect = 9.179e-26 Identity = 127/474 (26.79%), Postives = 227/474 (47.89%), Query Frame = 2
Query: 272 SSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQ-EEEPKSFG--PGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLT 1651
SS + LT+L L +N + + ++ L L L +S+N+++SLPDS+ NL +L+ ++ NK++++P + L TL +N + ++ K + LS LT++ + N+I + P +I EL L LD+++NQ+ +P + + LDL N L E G A ++++ L NRL+ P L + L+E++L +N IS + + LS + N+ +LT+A N P + + +L +ME + I+ PF + R+ + S L M++ Q P FG + LN AT + + + G+V L L++ N L +P ++ ++L NK P +I D LQ L L+NNQ++ LP I L+ L L + N ++ LPE + + L L+ N +++P ++ + L + + +C L+
Sbjct: 96 SSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYP---------VGGPSQFSTIYSL-----NMEHNR---INKIPFGIFSRAKVLSK-------LNMKDNQLTSLPLDFGTWTSMVELNLATNQ-----LTKIPEDICGLVSLEMLTLSN------NLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKD-LQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLS 533 HSP 3 Score: 79.337 bits (194), Expect = 6.223e-15 Identity = 60/193 (31.09%), Postives = 101/193 (52.33%), Query Frame = 2
Query: 164 SLNLANRNISEIPNSVYK----INMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYN-QITSMPFTLERLHNLQILDL 727
SLN+ + I++IP ++ ++ N+ D + S +W V +L L N ++ I +DI L L L +S+N + LP I NL +L+ ++ +NK++ LP++I +LQ L + N L +LP+G+ L+NLT + L N + P +I L L L L+ N + S+PF L L I+ +
Sbjct: 338 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMV---ELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSI 527
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Match: lrrc7 (leucine rich repeat containing 7 [Source:ZFIN;Acc:ZDB-GENE-130530-876]) HSP 1 Score: 103.605 bits (257), Expect = 2.590e-22 Identity = 89/297 (29.97%), Postives = 148/297 (49.83%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLT-----------------------IMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTF--SEGFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIIN 1108
L +L L AN I + K + L L + DN++S+LP +I +L LK +I+KN IQ+ PD I+ L + S N + LP+G L NLT I++L N + P I+ L L +LDL N+ + +P LE++H+L+ L L N LQT S G + + L NR+ + ++L+++ L+ NM+ ++ D + K+ + TL + +N++ +P I L+ L D S N++++LP ++G + L+ + D N L R I N
Sbjct: 48 LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKCLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLP-DSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLSDLPREIGN 343 HSP 2 Score: 86.6557 bits (213), Expect = 4.796e-17 Identity = 65/217 (29.95%), Postives = 113/217 (52.07%), Query Frame = 2
Query: 89 IDIGNSESQNNKAFENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNK 739
+D+G++E +L+Q L L N ++ IP S+ K+ D E D+ L L+L+AN + + I L KL+ L + DN ++SLP++I +L+ L+ F+ + N+++ LP I L+T + N L LP+ + N+T+M L N++ P +I ++ L L+LS N++ ++PFT +L +L L LS N+
Sbjct: 189 LDLGSNEFSE---LPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLSDLPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQ 402 HSP 3 Score: 80.8777 bits (198), Expect = 3.331e-15 Identity = 68/268 (25.37%), Postives = 135/268 (50.37%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRML 1090
LT+L L + ++ + L KL L++ +N++ ++P SI L+QL+ ++ N+ +LP+ +E L+ L N+L+++P + L L +DL+ N I I+ L L LS N + +P ++ +L L L + N+L + G + + + N L P + +L+ + N +S++ ++ + N+ +++ +NK+ +P+EI +T L L+LS+N +K LP + ++ L L + N + L
Sbjct: 140 LTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLSDLPRE-IGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKAL 406 HSP 4 Score: 76.6406 bits (187), Expect = 6.352e-14 Identity = 115/425 (27.06%), Postives = 192/425 (45.18%), Query Frame = 2
Query: 365 LSHLDISDNNISSLPDSITNLTQ-LKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMS 1636
+S LD S ++ +P I + + L+ ++ N+I++LP Q+ N L+ LS N L +LP + L NL +D+S N I EFP I L+ ++ S N I +P +L NL L L+ L+ F RL+K L+ + L N + + K + ++ + L + +N+ +++PE + + SL L L NN ++ +P S+G + QL+ L + N L I SG +S++ L N ++ P S G L+ L T+K D + T L T I LS D S N L S+P + SL+ N +S+LP I + + + + NK+ LP+ + +M+ L LS N + N +P +++ L L +S
Sbjct: 24 ISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKCLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYLPANF-----------GRLSK---------LRILELRENHLKTMPKS-IHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADI--SGCESLEDLLLSANMLQQLPDSIG-KLKKL--TTLKVDDNQL--TSLPNT-IGSLSLLEEFDCS---CNELESLP----------------PTIGYLHSLRTFAADENFLSDLPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKN-LPFTFTKLKDLAALWLS 399 HSP 5 Score: 57.3806 bits (137), Expect = 6.079e-8 Identity = 95/412 (23.06%), Postives = 182/412 (44.17%), Query Frame = 2
Query: 626 NELYLLTKLDLSYNQITSMP---FTLERLHNLQILDLSQNKLQTFSEGF--CAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEIL---------NSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFK 1792
E +++ LD S+ + +P F+ ER L+ L L N+++ + C + ++ + N L+ P + + NLKE+ ++ N I E D++ + + + N IA +PE + L +L+ L L++ ++ LP + G + +L+ L + N + + + SI R L L R + + F L ++ ++I NSL +IP ++ ++L N+ I +SL+DL LS N + +LP++I L L L + N++ LP ++ +S L F S N++ ++P + ++ L+T L+ + E I N+ V+++ +N + +P E+G K++ LNL N K
Sbjct: 19 GEEEVISVLDYSHCSLQQVPKEIFSFER--TLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFP-DNIKCCKCLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPK--------SIHR------------------LSQLERLDLGSNE-----------------FSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADI-SGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNEL-ESLPPTIGYLHSLRTFAADENFLSDLPRE-IGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLK 381
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Match: pparg (peroxisome proliferator activated receptor gamma [Source:Xenbase;Acc:XB-GENE-483136]) HSP 1 Score: 295.049 bits (754), Expect = 1.542e-90 Identity = 201/586 (34.30%), Postives = 333/586 (56.83%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVND-EKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMR------NTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
L+K A+KSG LNL+ R ++++P SV++IN+ + +++ F SD WW+ LTKLIL +N + +S+DISLL L LDI DN I SLP +I LT L+ NI+ NKI++LP ++++ L++L +N L+ LP + LS L +D+S+N + + +L L K +LS N++T++P + ++ NL+ LD + N L+ + Q++L N+LT P + LKE+ + +N I + +HL + ++ L + NK+ +PEEIS+L L LDLSNND+ +LP +LG + LK L ++GNP R ++R I+N G + +YL+ R TQE+E + A ++ + ++ + + + + + N+ S + +N + N+ + P +I + DS+ D++L N+IS + + L L +D+ N + LP + M+ L ILS+N + PDV+ R+ L+T+++S + ID K+ LS L++ NN + IPP LG CE ++L+L+GN F+ PR AI++KGT +V+EYLRSRI T
Sbjct: 30 GLIKAARKSGQLNLSARGLTDVPVSVWRINVDTPPEAHQNVDFGGSDR-WWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQVPDVKTQEDE--------NSTATAMTLPSESVVNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTRLQSVILSFNRFKH-FPDVLYRIPTLETILISSNQIGSIDPIKMTKLSTLDL---QNNDLLQIPPALGNCESQRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRIPT 602
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Match: pparg (peroxisome proliferator activated receptor gamma [Source:Xenbase;Acc:XB-GENE-483136]) HSP 1 Score: 289.271 bits (739), Expect = 1.174e-88 Identity = 202/583 (34.65%), Postives = 328/583 (56.26%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVND-EKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCE--KIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
L+K A+KSG LNL+ R ++++P SV++IN+ + +++ F SD WW+ LTKLIL +N + +S+DISLL L LDI DN I SLP +I LT L+ NI+ NKI++LP ++++ L++L +N L+ LP + LS L +D+S+N + + +L L K +LS N++T++P + ++ NL+ LD + N L+ + Q++L N+LT P + LKE+ + +N I + +HL + ++ L + NK+ +PEEIS+L L LDLSNND+ +LP +LG + LK L ++GNP R ++R I+N G + +YL+ R PG ++ ++ + I + ATG SF + +N + N+ + P +I + DS+ D++L N+IS + + L L +D+ N + LP + M+ L ILS+N + PDV+ R+ L+T+++S + ID K+ LS L++ NN + IPP LG CE +++L+L+GN F+ PR AI++KGT +V+EYLRSRI T
Sbjct: 29 HGLIKAARKSGQLNLSARGLTDVPVSVWRINVDTPPEAHQNVDFGGSDR-WWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQV--------PGKLFIHPKILEKQASLIPEAVFNATGS---SF------------------ITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTRLQSVILSFNRFKH-FPDVLYRIPTLETILISSNQIGSIDPIKMTKLSTLDL---QNNDLLQIPPALGNCESQSLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRIPT 577
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Match: pparg (peroxisome proliferator activated receptor gamma [Source:Xenbase;Acc:XB-GENE-483136]) HSP 1 Score: 280.411 bits (716), Expect = 3.532e-85 Identity = 198/582 (34.02%), Postives = 331/582 (56.87%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVND-EKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCE--KIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
L+K A+KSG LNL+ R ++++P SV++IN+ + +++ F SD WW+ LTKLIL +N + +S+DISLL L LDI DN I SLP +I LT L+ NI+ NKI++LP ++++ L++L +N L+ LP + LS L +D+S+N + + +L L K +LS N++T++P + ++ NL+ LD + N L+ + Q++L N+LT P + LKE+ + +N I + +HL + ++ L + NK+ +PEEIS+L L LDLSNND+ +LP +LG + LK L ++GNP R ++R I+N + L ++ TQE+E + A ++ + ++ + + + + + N+ S + +N + N+ + P +I + DS+ D++L N+IS + + L L +D+ N + LP + M+ L ILS+N + PDV+ R+ L+T+++S + ID K+ LS L++ NN + IPP LG CE +++L+L+GN F+ PR AI++KGT +V+EYLRSRI T
Sbjct: 26 GLIKAARKSGQLNLSARGLTDVPVSVWRINVDTPPEAHQNVDFGGSDR-WWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNVIIAYLYCSLDVK-TQEDE--------NSTATAMTLPSESVVNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTRLQSVILSFNRFKH-FPDVLYRIPTLETILISSNQIGSIDPIKMTKLSTLDL---QNNDLLQIPPALGNCESQSLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRIPT 593
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Match: pparg (peroxisome proliferator activated receptor gamma [Source:Xenbase;Acc:XB-GENE-483136]) HSP 1 Score: 280.026 bits (715), Expect = 5.927e-85 Identity = 198/583 (33.96%), Postives = 331/583 (56.78%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVND-EKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCE--KIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
L+K A+KSG LNL+ R ++++P SV++IN+ + +++ F SD WW+ LTKLIL +N + +S+DISLL L LDI DN I SLP +I LT L+ NI+ NKI++LP ++++ L++L +N L+ LP + LS L +D+S+N + + +L L K +LS N++T++P + ++ NL+ LD + N L+ + Q++L N+LT P + LKE+ + +N I + +HL + ++ L + NK+ +PEEIS+L L LDLSNND+ +LP +LG + LK L ++GNP R ++R I+N + L ++ TQE+E + A ++ + ++ + + + + + N+ S + +N + N+ + P +I + DS+ D++L N+IS + + L L +D+ N + LP + M+ L ILS+N + PDV+ R+ L+T+++S + ID K+ LS L++ NN + IPP LG CE +++L+L+GN F+ PR AI++KGT +V+EYLRSRI T
Sbjct: 29 HGLIKAARKSGQLNLSARGLTDVPVSVWRINVDTPPEAHQNVDFGGSDR-WWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNVIIAYLYCSLDVK-TQEDE--------NSTATAMTLPSESVVNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTRLQSVILSFNRFKH-FPDVLYRIPTLETILISSNQIGSIDPIKMTKLSTLDL---QNNDLLQIPPALGNCESQSLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRIPT 597
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Match: pparg (peroxisome proliferator activated receptor gamma [Source:Xenbase;Acc:XB-GENE-483136]) HSP 1 Score: 271.552 bits (693), Expect = 3.917e-82 Identity = 198/584 (33.90%), Postives = 323/584 (55.31%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVND-EKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDS--LQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCE--KIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
L+K A+KSG LNL+ R ++++P SV++IN+ + +++ F SD WW+ LTKLIL +N + +S+DISLL L LDI DN I SLP +I LT L+ NI+ NKI++LP ++++ L++L +N L+ LP + LS L +D+S+N + + +L L K +LS N++T++P + ++ NL+ LD + N L+ + Q++L N+LT P + LKE+ + +N I + +HL + ++ L + NK+ +PEEIS+L L LDLSNND+ +LP +LG + LK L ++GNP R ++R I+N G + +YL+ R TQE+E + AT + S+ ++N+ + +K + + S+ P +F + S + ++ S NQ++E+P N + LP + M+ L ILS+N + PDV+ R+ L+T+++S + ID K+ LS L++ NN + IPP LG CE +++L+L+GN F+ PR AI++KGT +V+EYLRSRI T
Sbjct: 30 GLIKAARKSGQLNLSARGLTDVPVSVWRINVDTPPEAHQNVDFGGSDR-WWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGR-TQEDENST--------------------------ATAMTL--------PSESVVNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVP-------------ARNNVLTSLPSEMEAMTRLQSVILSFNRFKH-FPDVLYRIPTLETILISSNQIGSIDPIKMTKLSTLDL---QNNDLLQIPPALGNCESQSLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRIPT 560
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Match: Lrrc40 (leucine rich repeat containing 40 [Source:MGI Symbol;Acc:MGI:1914394]) HSP 1 Score: 294.278 bits (752), Expect = 2.339e-90 Identity = 207/587 (35.26%), Postives = 338/587 (57.58%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDE--KSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRM-----RNTQEEEPKSFGPGLQALNRATIKDDS--GFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRI 1858
+ LLK A+ SG LNLA RN+ E+P V++IN+ ++ +E +++SF S WWD LTKLI+++N + +S D+ LL L+ LDI DN ++SLP +I L L+ N++ NK++ LP++I + L+TL +N L +P+G LS L +DLS N ++ P L L +L+LS NQ+ ++P + R+ L+ LD N L+T G + ++L N+L P + LKE+ L N I ++ +HL + I L + NK+ +PEE+++L SL LDLSNND+ +LP SLG++ LK L+++GNP R ++R II G + +YLR R Q + L + R I + +D +D +AT I D++ ++ + + IN + N+ P +I + + + D++LS N++S + + + L L LD+ N + LPE +S ++ L LS+N P+V+ R++ L+ +++S+ + +D +K+K++ NL L++ NN + IPPELG C ++++L LDGN F+VPR AI+ KGTA+V+EYLR RI
Sbjct: 29 QGLLKAARSSGQLNLAGRNLGEVPQCVWRINV-DIPEEANQNLSF-SSTERWWDQTDLTKLIISSNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYSDKQATLI-----------PDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRF-KVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRI 600
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Match: Lrrc1 (leucine rich repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442313]) HSP 1 Score: 108.997 bits (271), Expect = 2.257e-25 Identity = 89/272 (32.72%), Postives = 139/272 (51.10%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVH--QIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSI 1102
L +L+L AN + + + L KL L +SDN I LP I N QL ++++N I ++P+ I LQ S N L LP+ L NLT + ++ + P I LY L L+L N +T +P +L +L L+ LDL N++ E A +H +WL N+L++ P + N KNL + ++ N + + ++ +S + ++ L I+ N + IPE I L LS L L N + LP ++GD E L L + N L +SI
Sbjct: 38 LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEE-ISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSI 308 HSP 2 Score: 73.559 bits (179), Expect = 1.430e-13 Identity = 96/363 (26.45%), Postives = 148/363 (40.77%), Query Frame = 2
Query: 473 LPDQIENYLE-LQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVN--RLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLP--ESLSEMSC 1543
+P++I Y L+ L N L+ LP+ L L + LS NEI PP+I L +LD+S N I +P ++ LQ+ D S N L E F + L VN L P + N NL + L N+++ + D L+++ + L + NN+I ++PE I L L +L L N + LP +G+++ L CL + N L I SG S+ + +N E P+ G G D N+ + P I ++L +L L+ N++ LP +I L L L+ NK+ LP E +S C
Sbjct: 27 VPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLP-DSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI--SGLTSLTYLVISQNLLETIPE--GIGKLKKLSILKLDQ---------------------------------------------NRLTQLPEAIGD-CENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEEHISGKVC 338 HSP 3 Score: 67.0106 bits (162), Expect = 2.099e-11 Identity = 50/168 (29.76%), Postives = 91/168 (54.17%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTF--SEGFCAPVHQIWLH 793
L +L L N I + + I L L L + N +S LP I NL L ++++N++++LP++I L L S N L+++P+G+ L L+I+ L N +++ P I + LT+L L+ N++ ++P ++ +L L L+ +NKL + E V +++ H
Sbjct: 176 LEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEEHISGKVCRLFYH 343 HSP 4 Score: 64.6994 bits (156), Expect = 1.313e-10 Identity = 50/182 (27.47%), Postives = 84/182 (46.15%), Query Frame = 2
Query: 140 LKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMP 685
L Q ++ L+L N I +P S+ + + L L L N +S + ++I L L LD+S+N + LP+ I+ LT L Y I++N ++ +P+ I +L L N L LP+ + NLT + L+ N + P I +L L+ L+ N++ S+P
Sbjct: 170 LTQLRRLEELDLGNNEIYNLPESIGAL-----------------------LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLP 328 HSP 5 Score: 57.3806 bits (137), Expect = 2.666e-8 Identity = 93/351 (26.50%), Postives = 160/351 (45.58%), Query Frame = 2
Query: 764 CAPVHQIWLHVNRLTKFP---IVLPN------KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDS-GFIDQTDLRATGIVKLSFR-NLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGN 1783
C P+ + HV + K + +P ++L+E+ L N + E+ + ++ + L +++N+I +P EI+ L LD+S ND+ +P S+ + L+ GNP L P+SF P LQ L ++ D S + + + L R NL + L L + + ++L N+ P I L+DL L NQ+SELP I +L L LD+S N++ LPE +S ++ L++ ++S N + TIP+ + ++ L L + LT + E I NL L ++ N + +P +G +K+ +LN D N
Sbjct: 4 CIPLWRCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELP-EQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRL-------------------------PESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL--EELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQN-LLETIPEGIGKLKKLSILKLDQNRLTQLP-EAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRN 322
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Match: Lrrd1 (leucine rich repeats and death domain containing 1 [Source:MGI Symbol;Acc:MGI:3045299]) HSP 1 Score: 112.079 bits (279), Expect = 5.079e-25 Identity = 150/557 (26.93%), Postives = 261/557 (46.86%), Query Frame = 2
Query: 164 SLNLANRNISEIPNSVYKINMPN---VNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFS-EGFCAP-VHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRY-LRMRNTQEEEPKSFGPGLQALNRATIKDDSG-FIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYE--KIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFK-VPR 1801
++NL + + E P + K+ ++ + +F+ D D + L L L N +S I +I L L L+ S N IS +P + L ++ +N N I LP +E+ L+TLS N L +P L+ L NL I++L +N+++ F + L L L+L+ N I S+P + L NL+ L + NKL + E F P + ++ L N+L + N K L+ ++L N++ I K +S N+ +L++++N I ++P++I L +L L ++ N M + + + + L GN + I N I R L N F GL AL +G +I + V +SF S ++L+ + LN NK ++F + ++ L+ LDL+ NQI +P+ IS++ L L +S NK P+ L + L +S N + IP +S++ +Q L +S+ T E +++ L L + S ++ +P E+ ++K LN+ N K +P+
Sbjct: 139 TVNLDAKGLQEFPVDIVKVKYVKYLYLDKNQIKNFQGIDPG--DLLGLEILSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPK-KISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPIEIKN--CRKITRVELNYNNIM-----YFPVGLCALQSLDYLSFNGNYISEIP------VDMSF------SKQLLH---------LELNRNKLTVFSKHLCSLTN-LEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKL-QKIPLEISKLKRIQKLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKLTRLPEEVSHMTQLKILNISNNAIKDIPK 662 HSP 2 Score: 108.227 bits (269), Expect = 8.885e-24 Identity = 116/420 (27.62%), Postives = 204/420 (48.57%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLP-NKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCL 1546
L L++ N ++F++ +I L K+ L ++DN + ++ I N +L+ N++KN +Q +P +I + + L++LS S N ++ LPK + L NL + ++ N++ +I+ L + L+ S NQIT +P ++ + ++L+ N + F G CA + + + N +++ P+ + +K L + L N ++ +K HL + N+ L +A N+I IP IS + SL L LS+N ++ P L ++ L+ L I N + + I S I++ N P LQ L I SG + L L +E+ H +K +N++ N P I + SL SNNQIS LP++ SL L+ LD+ N + LP + ++S L
Sbjct: 322 LESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSK-HLCSLTNLEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLEI--SKLKRIQKLNLSNNIFTNFPVELC-QLQTLEELNISQTSG-----------------KKLTRLPEEV---SHMTQLKILNISNNAIKDIPKNIGELR-SLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKLSSL 716 HSP 3 Score: 58.9214 bits (141), Expect = 1.636e-8 Identity = 98/423 (23.17%), Postives = 190/423 (44.92%), Query Frame = 2
Query: 548 KGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQI------------------------TSMPFTLERLHNLQILDLSQNKLQTFSEGF--CAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKD-DSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLV---MSHCGLTIIDYEKIKMLSNLEVL 1699
KGL+ S+ ++L + EFP I ++ + L L NQI +S+P ++ HNL+IL+ S N++ + + Q+ L+ N + P L + + L+ +SL NM++ I D LS + N+ L + N++ + + L L++L+L+ N + +LP + +++ L+ L +D N L I IK N E + P ++ + + D + + + V L +L+D N++ +P ++ +++N NK +I S+ + L+ S NQI+ +P I + + R+++++N I P L + L + LS+N GN I ++ M++ + L+ ++ LT+ + + L+NLE L
Sbjct: 129 KGLDMKSDNFTVNLDAKGLQEFPVDIVKVKYVKYLYLDKNQIKNFQGIDPGDLLGLEILSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTYIP-DSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQ--LPKIKELHLADNKLE----AISPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSD------NNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSN-IHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDY--LSFN--GNYISEIPVDMSFSKQLLHLELNRNKLTVFS-KHLCSLTNLEYL 532
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Match: Lrrc1 (leucine rich repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442313]) HSP 1 Score: 109.383 bits (272), Expect = 1.231e-24 Identity = 115/382 (30.10%), Postives = 179/382 (46.86%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVH--QIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSI------INSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIP-------VKGINLNGNKFSIFPLKIFQ 1393
L +L+L AN + + + L KL L +SDN I LP I N QL ++++N I ++P+ I LQ S N L LP+ L NLT + ++ + P I LY L L+L N +T +P +L +L L+ LDL N++ E A +H +WL N+L++ P + N KNL + ++ N + + ++ +S + ++ L I+ N + IPE I L LS L L N + LP ++GD E L L + N L +SI N AD RN PK G G +L I+D+ + + + V+L ++A N LH +P +K + L+ N+ PL FQ
Sbjct: 38 LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEE-ISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNAD--------RNKLVSLPKEIG-GCCSLTMFCIRDNR--LTRLPAEVSQAVELHVLDVAG------NRLHHLPLSLTTLKLKALWLSDNQSQ--PLLTFQ 399 HSP 2 Score: 78.1814 bits (191), Expect = 1.331e-14 Identity = 101/389 (25.96%), Postives = 159/389 (40.87%), Query Frame = 2
Query: 473 LPDQIENYLE-LQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVN--RLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTL 1627
+P++I Y L+ L N L+ LP+ L L + LS NEI PP+I L +LD+S N I +P ++ LQ+ D S N L E F + L VN L P + N NL + L N+++ + D L+++ + L + NN+I ++PE I L L +L L N + LP +G+++ L CL + N L I SG S+ + +N E P+ G G D N+ + P I ++L +L L+ N++ LP +I L L L+ NK+ LP+ + L+ F + N + +P VS+ L L
Sbjct: 27 VPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYL-PDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI--SGLTSLTYLVISQNLLETIPE--GIGKLKKLSILKLDQ---------------------------------------------NRLTQLPEAIGD-CENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRL-TRLPAEVSQAVELHVL 363 HSP 3 Score: 56.6102 bits (135), Expect = 7.494e-8 Identity = 87/319 (27.27%), Postives = 149/319 (46.71%), Query Frame = 2
Query: 833 KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDS-GFIDQTDLRATGIVKLSFR-NLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGN 1783
++L+E+ L N + E+ + ++ + L +++N+I +P EI+ L LD+S ND+ +P S+ + L+ GNP L P+SF P LQ L ++ D S + + + L R NL + L L + + ++L N+ P I L+DL L NQ+SELP I +L L LD+S N++ LPE +S ++ L++ ++S N + TIP+ + ++ L L + LT + E I NL L ++ N + +P +G +K+ +LN D N
Sbjct: 36 RSLEELLLDANQLREL-PEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRL-------------------------PESF-PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL--EELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQN-LLETIPEGIGKLKKLSILKLDQNRLTQLP-EAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRN 322
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Match: Shoc2 (Shoc2, leucine rich repeat scaffold protein [Source:MGI Symbol;Acc:MGI:1927197]) HSP 1 Score: 105.531 bits (262), Expect = 2.800e-23 Identity = 127/461 (27.55%), Postives = 223/461 (48.37%), Query Frame = 2
Query: 371 HLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHV--NRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSL-GDMEQLKCLSIDGNPFRM----------------LKRSIINS---GADSIKRYLRMRNTQEEE----PKSFGP--GLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSL-HSI----PVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLT 1651
LD+S +I LP S+ LTQL + NK+Q LP ++ + L TL+ S N+L SLP L+ L L ++DL HN++ E P + L LT L L +N+IT++ ++ L L +L + +NK++ + I L V N+L P + N + + L HN + ++ D + + ++ L + N+++ IP ++ ++L L+L NN++ LP SL + +L L++ N F++ ++ + IN G S + L N ++ + P FG + LN AT + + + +G+V L + LS+ +L L H + ++ ++L NK P +I D LQ L L+NNQ+S LP I L+ L L + N + LPE + + L L+ N +++P ++ + L + + +C L+
Sbjct: 104 RLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLP-DTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQ-----LTKIPEDVSGLVSLE---VLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKD-LQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLS 554 HSP 2 Score: 93.2041 bits (230), Expect = 2.633e-19 Identity = 87/298 (29.19%), Postives = 146/298 (48.99%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLER------------------------LHNLQILDLSQNKLQTFSEGFCAPVHQIW---LHVNRLTKFP--IVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSI 1102
L L L N + I + LD L+ L + N I+++ I NL +L +I +NKI++LP +I L TL ++N L+ LPK + + +T +DL HN++ + P I L L +L L YN+++++P +L + L L L L++N Q + G + I+ + NR+ K P I K L ++++ N ++ + D ++ L +A N++ IPE++S L SL L LSNN +K LP LG++ +L+ L ++ N L I
Sbjct: 171 LRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEI 467 HSP 3 Score: 92.0485 bits (227), Expect = 6.288e-19 Identity = 114/435 (26.21%), Postives = 202/435 (46.44%), Query Frame = 2
Query: 581 MDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGF--CAPVHQIWLHVNRLTKFP-IVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKG---------INLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYN-------DIGN---------------TIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGN 1783
+DLS I PP + EL LT+L L N++ S+P + L NL L LS+N L + + + + L N+L + P +V +L + L N I+ + KD + +P + L+I NKI +P EI L +L LD+++N ++ LP +G+ Q+ L + N L +I N S+ R N P+S ++ + ++ L + +VKL+ LA N PV G +N+ N+ + P IF + L L++ +NQ++ LP + + + L+++ N++ +PE +S + L ILS N +GN ++P+ ++ + LQ LV+++ L+ + I L+NL L + N ++++P E+G E ++ L L+ N
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGN--LSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL--SSLVKLNSLTLAR------NCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDN 527 HSP 4 Score: 73.559 bits (179), Expect = 4.030e-13 Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 2
Query: 365 LSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVN 799
LS L++ DN ++SLP T + N+ N++ K+P+ + + L+ L S N LK LP GL L L +DL N++ P +I L L KL L+ NQ++++P + L NL L L +N L E G + +++L+ N
Sbjct: 381 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDN 527 HSP 5 Score: 56.6102 bits (135), Expect = 7.823e-8 Identity = 50/205 (24.39%), Postives = 89/205 (43.41%), Query Frame = 2
Query: 164 SLNLANRNISEIPNSVYK----INMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLT-----------------------------------------------IMDLSHNEISEFPPQI 625
SLN+ + I++IP ++ ++ N+ D + S +W + +L L N ++ I +D+S L L L +S+N + LP + NL +L+ ++ +NK++ LP++I +LQ L + N L +LP+G+ L+NLT IM + + +S PPQI
Sbjct: 359 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTS---MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 560
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Match: sp|Q7SXW3|LRC40_DANRE (Leucine-rich repeat-containing protein 40 OS=Danio rerio OX=7955 GN=lrrc40 PE=2 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 9.900e-98 Identity = 206/586 (35.15%), Postives = 335/586 (57.17%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKS-ISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQ------EEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
LLK A+KSG LNL+ R ++E+P SV+++N+ + K +SF D WW+ LTKL+L++N + I D+ LL L LDI DN +SSLPDSI +L QL+ ++ NK+ +LP + L+ L N ++ +P+ L L NL +DLS+N + + P + L L KLDLS N++ S+P + ++ NL++LD S+N++++ + Q++L N+L P + K LKE+ +N I + +HL + + L + +NK+ +PEEI++L L LDL+NND+ +LP LG + +LK LS++GNP R ++R ++ G + +YLR R + +EEPK+ A I+ ++ + S + A + D++ +++ PV +N + N+ + P +I DSL D++L N+++ +P L L +D+ N + LP L + L ILS+N + P+V+ R+ L+T+++S + ID ++K LS L L++SNN I +PPELG C +++L LDGN F+ PR AI+ KGT +V+EYLRSRI T
Sbjct: 28 GLLKAARKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDR-WWEQTDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKT----------AMTFPSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRF-KSFPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAVLEYLRSRIPT 601
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Match: sp|Q5ZLN0|LRC40_CHICK (Leucine-rich repeat-containing protein 40 OS=Gallus gallus OX=9031 GN=LRRC40 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.764e-97 Identity = 197/593 (33.22%), Postives = 348/593 (58.68%), Query Frame = 2
Query: 104 SESQNNKAFENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVND-EKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKL---SFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
+E Q+ + L++ A+KSG LNLA R + E+P V++IN+ + +++SF +D WW+ LTKLIL +N + +S+D+ LL L+ LD+ DN ++SLP ++ L L+ +++ NK++ +P+++ L+ L +N L LP G L +L +DLS+N +++ P L L +L+L+ NQ+ +P + + +L+ LD ++N L++ A + Q++L N+L P + K LKE+ N I + ++L + ++ L + +NKI +P+EI++L L LDL+NND+ LP +LG++ QLK L+++GNP R ++R ++ G + +YLR R ++ + P + A+ T+ +S + ++ A +KL S + +A + D++ +++ S PV +N + N+ + P +I + DS+ D++ N+IS + + +L L LDI N + LPE + ++ L LS+N P V+ RM L+T+++S+ + ID ++K + L L++ NN + +PPELG CE +++L L+GN F+ PR AI++KGTA+V+EYLRSRI T
Sbjct: 20 AEEQSPAVPQGLIRAARKSGQLNLAGRGLGEVPQHVWRINLDTPEEAHQNLSFGAADR-WWEQTDLTKLILASNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRLNLACNQLKDLPADISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSLPELPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRIQDDKASPNEEPPVTAM---TLPSES----RINMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTAIPPRIVELKDSVCDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFNRF-KVFPSVLYRMLALETILLSNNQVGSIDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCETLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSRIPT 603
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Match: sp|Q9H9A6|LRC40_HUMAN (Leucine-rich repeat-containing protein 40 OS=Homo sapiens OX=9606 GN=LRRC40 PE=1 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 6.216e-92 Identity = 207/589 (35.14%), Postives = 341/589 (57.89%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDE--KSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMR-----NTQEEEPKSFGPGLQALNRATIKD--DSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
+ LLK A+KSG LNL+ RN+SE+P V++IN+ ++ +E +++SF ++ WW+ LTKLI++ N + ++ D+ LL L+ LDI DN ++SLP +I L L+ N++ NK++ LP++I N L+ L +N L + +G LSNL +DLS+N ++ P + L L +L+LS N++ S+P + R+ L+ LD + N L+T + ++L N+L P LKE+ + N I + +HL + +I L + +NK+ +P+EI +L SL LDLSNND+ +LP SLG++ LK L+++GNP R ++R II+ G + +YLR + +Q E L + +R I +D +D +AT I DE+ +++ S V IN + N+ P ++ + + + D+DLS N++S + + L L LD+ N + LPE + + L LS+N +P+V+ R+ L+T+++S+ + +D +K+KM+ NL L++ NN + IPPELG C +++L LDGN F+VPR AI+ KGTA+++EYLR RI T
Sbjct: 29 QGLLKAARKSGQLNLSGRNLSEVPQCVWRINV-DIPEEANQNLSFGATER-WWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLI-----------PDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRF-KMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIPT 602
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Match: sp|Q6GPJ5|LRC40_XENLA (Leucine-rich repeat-containing protein 40 OS=Xenopus laevis OX=8355 GN=lrrc40 PE=2 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 8.114e-92 Identity = 202/586 (34.47%), Postives = 340/586 (58.02%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVND-EKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMR------NTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
L+K A+KSG LNL+ R ++E+P SV++IN+ + +++ F SD WW+ LTKLIL +N + +S+DISLL L LDI DN I+SLP +I LT L+ NI+ NKI++LP+++++ L++ +N L+ LP + LS L +D+S+N + + +L L K +LS N++T++P + ++ NL+ LD + N L+ + Q++L N+LT P + LKE+ + +N I + +HL + ++ L + NK+ +P+EIS+L L LDLSNND+ +LP +LG + LK L +DGNP R ++R I+N G + +YL+ R TQE + P A+ T+ DS I+ + ++ + + + + + N+ S P+ +N + N+ + P +I + DS+ D++L N+IS + + L L LD+ N + LP + ++ L ILS+N + PDV+ + L+T+++S + ID ++K ++ L L++ NN + IPP LG CE +++L+L+GN F+ PR I++KGT +++EYLRSRI T
Sbjct: 30 GLIKAARKSGQLNLSARGLTEVPVSVWRINVDTPPEAHQNVDFGGSDR-WWEQTDLTKLILASNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGSLPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMTTQE----AANPPDTAM---TLPSDS-VINAHAIMTLKTLEYCEKQASLIPEAVFNAAASSPITTVNFSKNQLTEVPARIVEMKDSVYDVNLGFNKISSISLNLCMLLKLTHLDMRNNALASLPPEMEALTRLQSIILSFNRFKH-FPDVLYTIPNLETILISSNQIGSIDPIQLKKMTKLSTLDLQNNDLLQIPPALGNCESLRALHLEGNPFRNPRATILAKGTVAILEYLRSRIPT 605 HSP 2 Score: 74.7146 bits (182), Expect = 1.117e-12 Identity = 59/209 (28.23%), Postives = 109/209 (52.15%), Query Frame = 2
Query: 122 KAFENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSL-PKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQ 745
K N L+ + S L + + E+P+S+ +++ D + SS L K L++N ++ + +I + L LD + N + ++P S+ + L+ + +NK+ LP+ + +L+ L N +++L P+ L LS+L++++L +N++ P +I+ L L +LDLS N I S+P TL L NL+ L L N L+
Sbjct: 141 KQLPNELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLPE-LPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGSLPDTLGSLPNLKSLQLDGNPLR 348
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Match: sp|Q4R3P6|LRC40_MACFA (Leucine-rich repeat-containing protein 40 OS=Macaca fascicularis OX=9541 GN=LRRC40 PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 8.711e-92 Identity = 206/589 (34.97%), Postives = 340/589 (57.72%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDE--KSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMR-----NTQEEEPKSFGPGLQALNRATIKD--DSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
+ LLK A+KSG LNL+ RN+SE+P V++IN+ ++ +E +++SF ++ WW+ LTKLI++ N + ++ D+ LL L+ LDI DN ++SLP ++ L L+ N++ NK++ P++I N L+ L +N L + +G LSNL +DLS+N ++ P + L L +L+LS NQ+ S+P + R+ L+ LD + N L+T + ++L N+L P LKE+ + N I + +HL + +I L + +NK+ +P+EI +L SL LDLSNND+ +LP SLG++ LK L+++GNP R ++R IIN G + +YLR + +Q E L + +R I +D +D +AT I DE+ N++ S + IN + N+ P ++ + + + D++LS N++S + + L L LD+ N + LPE + + L LS+N +P+V+ R+ L+T+++S+ + +D +K+KM+ NL L++ NN + IPPELG C +++L LDGN F+VPR AI+ KGTA+++EYLR RI T
Sbjct: 29 QGLLKAARKSGQLNLSGRNLSEVPQCVWRINV-DIPEEANQNLSFGATER-WWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQATLI-----------PDEVFNAVKSNIITSINFSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRF-KMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRIPT 602
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Match: K1QH70 (Leucine-rich repeat-containing protein 40 OS=Crassostrea gigas OX=29159 GN=CGI_10024852 PE=4 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 1.726e-102 Identity = 208/581 (35.80%), Postives = 343/581 (59.04%), Query Frame = 2
Query: 137 LLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYL--RMRNTQEEEPKSFGPGLQALNRATIKDDSG-FIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
+LKQA+K+G LNL+ RN+S +P++V+++N+ + + +S + +D WW+ LTKLIL +N ++ IS++IS LS LDI DN + SLP SI L L ++++NK+++LP+ + L++L YN L + +G+ L L +DLS+N++SE PPQ+ LY + K ++S N+++S+P + ++ L+ LD++ N+L E G + Q++L N+L+ P++ KNLKEI L +N I +IT +HL + ++ L I +NKI+++PEEI+ L+ L LDL+NND+ LP LG + LK + +DGNP + ++R II G +K+YL R+ + Q EP + G+Q I SG + D++ + + S + + D+I V +NL+ N+F+ P + +L++ + N++++L IS L LD+ N + LP + + + +LS N T+P + M L+ + + +T ID K L L L++ NN I +PPELG C +IKSL L+GN F+ PRPAI++KGT +++EYLRSRIV+
Sbjct: 29 ILKQARKTGQLNLSGRNLSTVPDTVWRLNLDVPEEARDVSLDNTDERWWEQTELTKLILASNLLTEISQEISNFQALSVLDIHDNRLESLPQSIRELENLVKLDVSRNKLKELPESVTYLRNLRSLHVEYNELVRVSEGIGHLDKLEDLDLSNNQLSELPPQVGHLYHVLKFNVSNNRLSSLPPEIGSMNALKCLDVTHNQLTHLPEDLGNLPNLEQLYLRHNQLSGIPLLKNCKNLKEIHLGNNQIRKITAEHLQHLESVTVLDIRDNKISELPEEITCLSGLQRLDLTNNDLTGLPFVLGTITSLKSIVLDGNPMKSIRRDIIMRGTVELKKYLCSRIEDPQPVEPTN--KGIQNGGDTGIVGGSGEGLKAHDIQQSKSLDYSNKKATAVPDDIWEVAMKAGVTSVNLSKNQFTDLPSNLILLESTLKEFNFGFNKLTKLNPDISLFLRLTTLDLRNNGLSDLPRDMESLQDMREIVLSCNRF-TTLPSSLYEMKKLEIIFADNNKITTIDAAGFKNLPMLATLDLQNNNIDQVPPELGNCTQIKSLLLNGNAFRNPRPAILTKGTLALLEYLRSRIVS 606
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Match: A0A5N5PX81 (Uncharacterized protein OS=Pangasianodon hypophthalmus OX=310915 GN=PHYPO_G00105910 PE=4 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 4.147e-101 Identity = 207/580 (35.69%), Postives = 344/580 (59.31%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINM-PNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
LLK A+KSG LNL+ R +SE+P SV++IN+ P ++++SF ++ WW+ LTKL+L++N + IS+DI LL L LDI DN +++LP SI L QL+ ++ NK+ +LP ++ + L+ L N L+ LP L L +L +D+S+N++ P + +L L KL+LS+N + S+P + + NL++LD S+N+L++ A + Q++L N+L P + K LKE+ +N I + DHL + + L + +NK+ +PEEI++L L LDL+NND+ ++P LG + LK L+++GNP R ++R I+ G + +YLR R +E+P G + N A I+ ++ + S + A + D++ +++++ PV +N + N+ + P +I + D+L D++L N+IS +P S L L +D+ N + LP L ++ L ILS+N PDV+ R+ L+T+++S+ + ID ++K+L L L++ NN I +PPELG C +++L LDGN F+ PR AI++KGT +++EYLRSRI T
Sbjct: 28 GLLKSARKSGQLNLSGRGLSEVPQSVWRINVDPPEEAQQNVSFSAAE-RWWEQTDLTKLLLSSNKLQTISEDIKLLPALVVLDIHDNQLTTLPASIGELEQLQKLILSHNKLTELPTELWSLTNLRCLHLQQNLLEQLPADLGQLCHLEDLDISNNKLMAVPDSLADLSNLVKLNLSFNNLKSLPSAISGMKNLRMLDCSRNQLESVPPVLAQMASLEQLYLRHNKLRFLPELPSCKTLKELHCGNNQIEVLEADHLKHLSALSVLELRDNKVKSLPEEITVLQGLERLDLTNNDISSVPCGLGTLPNLKSLALEGNPLRTIRRDILTKGTSELLKYLRSR--IQEQPD--GKAKEGPNTAMTLPSQAKINVHAIKTLKTLDYSEKQEASIPDDVFDAVNNSPVANVNFSKNQLTAVPPRIVELRDTLADINLGCNKISTIPLEFSKLQQLVHIDLRNNLLTSLPVELEALTKLRSIILSFNKF-KCFPDVLYRILTLETILISNNQVGAIDPVQLKLLDRLSTLDLQNNDIMQVPPELGNCTSLRALLLDGNPFRNPRAAIVAKGTDALLEYLRSRIPT 601
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Match: A0A4W5P7F3 (Leucine rich repeat containing 40 OS=Hucho hucho OX=62062 PE=4 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 2.010e-98 Identity = 198/580 (34.14%), Postives = 344/580 (59.31%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKS-ISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
LLK A+KSG LNL+ R ++E+P SV+++N+ + K +SF +D WWD LTKL+L++N + +S+D+ LL L+ LD+ DN ++SLP SI L L+ +++ NK+++LP+++ + L L N L+ LP+G+ L+NL +DLS+N+++ P + L L KL+LS+N++ S+P + + NL++LD + N+L++ A + Q++L N+L P LP+ LKE+ + +N I + +HL + + L + +NK+ +PEEI +L L LDL NND+ +LP SL + +LK L+++GNP R ++R ++ G + + +YLR R ++ + K P + A I+ ++ + S + +A + D++ +++ S PV +N + N+ + P ++ + DS+ D++L N+++ LP L L +D+ N + LP + + L LS+N P+V+ R+ L+T+++S+ + I+ ++K L L L++ NN I +PPELG C +++L LDGN F+ PR AI+S+GT +V+EYLRSRI T
Sbjct: 29 GLLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSF-GADDRWWDQTDLTKLLLSSNKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPEEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLP-ELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKSLPEEIKLLQGLERLDLVNNDISSLPASLALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYLRGRIKEDPDGKGDEP-----DTAMTLPSQAKINVHTIKTLKTLDYSEKQVACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRVVELKDSVSDINLGFNKLTSLPLEFCMLQQLAHIDLRNNLLTSLPMEIEALMKLRSITLSFNRF-KLFPEVLYRVPSLETILISNNQVGAINPLQLKALDKLSTLDLQNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAIVSRGTDAVLEYLRSRIPT 600
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Match: B5DG62 (Leucine rich repeat containing 40 OS=Salmo salar OX=8030 GN=lrrc2 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 3.138e-98 Identity = 198/580 (34.14%), Postives = 343/580 (59.14%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKS-ISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
LLK A+KSG LNL+ R ++E+P SV+++N+ + K +SF +D WWD LTKL+L +N + +S+D+ LL L+ LD+ DN ++SLP SI L L+ +++ NK+++LP ++ + L L N L+ LP+G+ L+NL +DLS+N+++ P + L L KL+LS+N++ S+P + + NL++LD + N+L++ A + Q++L N+L P LP+ LKE+ + +N I + +HL + + L + +NK+ +PEEI +L L LDL NND+ +LP +L + +LK L+++GNP R ++R ++ G + + +YLR R ++ + K P + A I+ ++ I+ S + +A + D++ +++ S PV +N + N+ + P ++ + DS+ D++L N+++ LP L L +D+ N + LP + + L LS+N P+V+ R+ L+T+++S+ + I+ ++K L L L++ NN I +PPELG C +++L LDGN F+ PR AI+S+GT +V+EYLRSRI T
Sbjct: 29 GLLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSF-GADDRWWDQTDLTKLLLPSNKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLP-ELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYLRGRIKEDPDGKGDEP-----DTAMTLPSQAKINVHTIKTLKILDYSEKQMACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRLVELKDSVSDINLGFNKLTSLPLEFCMLQQLAHIDLRNNLLTSLPMEIEALMKLRSITLSFNRF-KLFPEVLYRVPSLETILISNNQVGAINPLQLKALDKLSTLDLQNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAIVSRGTDAVLEYLRSRIPT 600
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Match: A0A060WCC5 (Uncharacterized protein OS=Oncorhynchus mykiss OX=8022 GN=GSONMT00066715001 PE=4 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 3.239e-98 Identity = 197/580 (33.97%), Postives = 343/580 (59.14%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKS-ISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
LLK A+KSG LNL+ R ++E+P SV+++N+ + K +SF +D WWD LTKL+L++N + +S+D+ LL L+ LD+ DN ++SLP SI L L+ +++ NK+++ P++I + L L N L+ LP+G+ L+NL +DLS+N+++ P + L L KL+LS+N++ S+P + + NL++LD + N+L++ A + Q++L N+L P LP+ LKE+ + +N I + +HL + + L + +NK+ +PEEI +L L LDL NND+ +LP +L + +LK L+++GNP R ++R ++ G + + +YLR R ++ + K P + A I+ ++ + S + +A + D++ +++ S PV +N + N+ + P ++ + DS+ D++L N+++ LP L L +D+ N + LP + + L LS+N P+V+ R+ L+T+++S+ + I+ ++K L L L++ NN I +PPELG C +++L LDGN F+ PR AI+S+GT +V+EYLRSRI T
Sbjct: 29 GLLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSF-GADDRWWDQTDLTKLLLSSNKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKEFPEEIWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLP-ELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIKLLQGLERLDLVNNDISSLPAALALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYLRGRIKEDSDGKGDEP-----DTAMTLPSQAKINVHTIKTRKTLDYSEKQMACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRVVELKDSVSDINLGFNKLTSLPLEFCMLQQLAHIDLRNNLLTSLPMEIEALMKLRSITLSFNRF-KLFPEVLYRVPSLETILISNNQVGAINPLQLKALDKLSTLDLQNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAIVSRGTDAVLEYLRSRIPT 600
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:103027596]) HSP 1 Score: 303.138 bits (775), Expect = 6.578e-94 Identity = 203/586 (34.64%), Postives = 337/586 (57.51%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINM-PNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQE------EEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
LLK A++SG LNL+ R ++E+P SV+++N+ P ++++SF SD WW+ LTKL+L++N + +S+D+ LL L LDI DN + +LP +I L QL+ N++ NK+ LP ++ N L+ L N L+ LP L L L +DLS+N++ P + L L KL+LS+N + S+P + + NL++LD S+N+L++ A + Q++L N+L P + K LKE+ +N I + HL + + L + +NK+ +PEEI++L L LDL+NND+ ++P LG++ +L L+++GNP R ++R ++ G + +YLR R +E +EPK+ A I+ ++ ++ S + + D++ +++ V +N + N+ + P +I + D+L DL+L N++S +P S L L +D+ N + LP L + L ILS+N PDV+ R+ L+T++MS+ + ID ++K+L L L++ NN I +PPELG C +++L LDGN F+ PR AI++KGT S++EYLRSRI T
Sbjct: 28 GLLKGARQSGQLNLSGRGLTEVPQSVWRLNIDPPEEAQQNVSFSASDR-WWEQTDLTKLLLSSNKLETLSEDVKLLPALVVLDIHDNQLRTLPATIGELEQLQKLNLSHNKMTHLPLELWNLTNLRCLHLQQNLLEQLPSELGQLCQLEDLDLSNNKLIIVPDGLANLNNLVKLNLSFNSLKSLPSAISEMKNLRMLDCSRNQLESVPPVLAQMASLEQLYLRHNKLRFLPELPSCKTLKELHCGNNQIEVLEAAHLKHLSALSVLELRDNKVKSLPEEITLLQGLQRLDLTNNDLSSIPCGLGNLPKLTSLTLEGNPLRTIRRELLTKGTSELLKYLRSRIQEEPDGNLKDEPKT----------AMTLPSQSRINVHAIKTLKTLEYSQKQEVAIPDDVFDAVSDGAVVNVNFSKNQLTEVPPRIVELKDTLADLNLGFNKLSAVPIEFSKLQQLVHVDLRNNLLTSLPMELESLK-LRSIILSFNRF-KAFPDVLYRILSLETILMSNNQVGAIDPLRLKLLDKLSTLDLQNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAIVAKGTDSLLEYLRSRIPT 600
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:103027596]) HSP 1 Score: 288.115 bits (736), Expect = 1.921e-88 Identity = 195/586 (33.28%), Postives = 326/586 (55.63%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINM-PNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQE------EEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
LLK A++SG LNL+ R ++E+P SV+++N+ P ++++SF SD WW+ LTKL+L++N + +S+D+ LL L LDI DN + +LP +I L QL+ N++ NK+ LP ++ N L+ L N L+ LP L L L +DLS+N++ P + L L KL+LS+N + S+P + + NL++LD S+N+L++ A + Q++L N+L P + K LKE+ +N I + HL + + L + +NK+ +PEEI++L L LDL+NND+ ++P LG++ +L L+++GNP R ++R ++ G + +YLR R +E +EPK+ A I+ ++ ++ S + + D++ +++ V +N + N+ + P +I + D+L DL+L N++S +P S L L +D+ F PDV+ R+ L+T++MS+ + ID ++K+L L L++ NN I +PPELG C +++L LDGN F+ PR AI++KGT S++EYLRSRI T
Sbjct: 28 GLLKGARQSGQLNLSGRGLTEVPQSVWRLNIDPPEEAQQNVSFSASDR-WWEQTDLTKLLLSSNKLETLSEDVKLLPALVVLDIHDNQLRTLPATIGELEQLQKLNLSHNKMTHLPLELWNLTNLRCLHLQQNLLEQLPSELGQLCQLEDLDLSNNKLIIVPDGLANLNNLVKLNLSFNSLKSLPSAISEMKNLRMLDCSRNQLESVPPVLAQMASLEQLYLRHNKLRFLPELPSCKTLKELHCGNNQIEVLEAAHLKHLSALSVLELRDNKVKSLPEEITLLQGLQRLDLTNNDLSSIPCGLGNLPKLTSLTLEGNPLRTIRRELLTKGTSELLKYLRSRIQEEPDGNLKDEPKT----------AMTLPSQSRINVHAIKTLKTLEYSQKQEVAIPDDVFDAVSDGAVVNVNFSKNQLTEVPPRIVELKDTLADLNLGFNKLSAVPIEFSKLQQLVHVDLRF---------------------------KAFPDVLYRILSLETILMSNNQVGAIDPLRLKLLDKLSTLDLQNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAIVAKGTDSLLEYLRSRIPT 575
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:103027596]) HSP 1 Score: 286.96 bits (733), Expect = 6.757e-88 Identity = 197/580 (33.97%), Postives = 329/580 (56.72%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINM-PNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVT 1864
LLK A++SG LNL+ R ++E+P SV+++N+ P ++++SF SD WW+ LTKL+L++N + +S+D+ LL L LDI DN + +LP +I L QL+ N++ NK+ LP ++ N L+ L N L+ LP L L L +DLS+N++ P + L L KL+LS+N + S+P + + NL++LD S+N+L++ A + Q++L N+L P + K LKE+ +N I + HL + + L + +NK+ +PEEI++L L LDL+NND+ ++P LG++ +L L+++GNP R ++R ++ ++EPK+ A I+ ++ ++ S + + D++ +++ V +N + N+ + P +I + D+L DL+L N++S +P S L L +D+ N + LP L + L ILS+N PDV+ R+ L+T++MS+ + ID ++K+L L L++ NN I +PPELG C +++L LDGN F+ PR AI++KGT S++EYLRSRI T
Sbjct: 28 GLLKGARQSGQLNLSGRGLTEVPQSVWRLNIDPPEEAQQNVSFSASDR-WWEQTDLTKLLLSSNKLETLSEDVKLLPALVVLDIHDNQLRTLPATIGELEQLQKLNLSHNKMTHLPLELWNLTNLRCLHLQQNLLEQLPSELGQLCQLEDLDLSNNKLIIVPDGLANLNNLVKLNLSFNSLKSLPSAISEMKNLRMLDCSRNQLESVPPVLAQMASLEQLYLRHNKLRFLPELPSCKTLKELHCGNNQIEVLEAAHLKHLSALSVLELRDNKVKSLPEEITLLQGLQRLDLTNNDLSSIPCGLGNLPKLTSLTLEGNPLRTIRRELLTVKEPD--------GNLKDEPKT----------AMTLPSQSRINVHAIKTLKTLEYSQKQEVAIPDDVFDAVSDGAVVNVNFSKNQLTEVPPRIVELKDTLADLNLGFNKLSAVPIEFSKLQQLVHVDLRNNLLTSLPMELESLK-LRSIILSFNRF-KAFPDVLYRILSLETILMSNNQVGAIDPLRLKLLDKLSTLDLQNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAIVAKGTDSLLEYLRSRIPT 586
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:555476]) HSP 1 Score: 121.709 bits (304), Expect = 9.644e-29 Identity = 142/511 (27.79%), Postives = 250/511 (48.92%), Query Frame = 2
Query: 368 SHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIPVK--------GINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGL--TIIDY--EKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR 1849
+ LD+S +I LP SI LTQL + NK+Q LP ++ L TL+ S N+L SLP L+ L L ++DL HN++ E P + + LT L L +N+IT++ + L L +L + +NK++ Q+ + L NL + + HN + + K+ + I L + +N++ D+PE I L+S++ L L N + A+P SL +L+ L+++ N +L +++S + L RN + P GP Q ++ + I++ RA + KL+ ++ N L S+P+ +NL N+ + P I + SL+ L LSNN + +LP+ I +L LR LD+ NK+ LP ++ + L +L+ N + T+P + + L +H GL ++ + E+I L NLE L +++N + P EL LC K+ ++++ P I++ G + ++++L+
Sbjct: 55 TRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVTSLTTLYLRFNRITTVEKDIRNLAKLTMLSIRENKIK-----------QLPAEIGELC---------NLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTL-ARNCFQSYPVG-GPS-QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKD---------NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLA-SLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQL-TTLPRGIGHLTNL-----THLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLK 525 HSP 2 Score: 114.005 bits (284), Expect = 3.605e-26 Identity = 127/471 (26.96%), Postives = 228/471 (48.41%), Query Frame = 2
Query: 272 SSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQ-EEEPKSFG--PGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSL-HSI----PVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLT 1651
SS + LT+L L +N + + ++ L L L +S+N+++SLPDS+ NL +L+ ++ NK++++P + L TL +N + ++ K + L+ LT++ + N+I + P +I EL L LD+++NQ+ +P + + LDL N+L E G + ++++ L NRL+ P L + L+E++L +N IS + + LS + N+ +LT+A N P + + +L +ME + I+ PF + R+ + S L M++ Q P FG + LN AT +Q I L+ + LS+ +L L H I ++ ++L NK P +I D LQ L L+NNQ++ LP I L+ L L + N ++ LPE + + L L+ N +++P ++ + L + + +C L+
Sbjct: 69 SSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVTSLTTLYLRFNRITTVEKDIRNLAKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYP---------VGGPSQFSTIYSL-----NMEHNR---INKIPFGIFSRAKVLSK-------LNMKDNQLTSLPLDFGTWTSMVELNLAT--------NQLTKIPEDICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKD-LQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLS 506
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:555476]) HSP 1 Score: 122.094 bits (305), Expect = 9.826e-29 Identity = 141/509 (27.70%), Postives = 249/509 (48.92%), Query Frame = 2
Query: 368 SHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIPVK--------GINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDY--EKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR 1849
+ LD+S +I LP SI LTQL + NK+Q LP ++ L TL+ S N+L SLP L+ L L ++DL HN++ E P + + LT L L +N+IT++ + L L +L + +NK++ Q+ + L NL + + HN + + K+ + I L + +N++ D+PE I L+S++ L L N + A+P SL +L+ L+++ N +L +++S + L RN + P GP Q ++ + I++ RA + KL+ ++ N L S+P+ +NL N+ + P I + SL+ L LSNN + +LP+ I +L LR LD+ NK+ LP ++ + L +L+ N + T+P + + L L + G ++ + E+I L NLE L +++N + P EL LC K+ ++++ P I++ G + ++++L+
Sbjct: 86 TRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVTSLTTLYLRFNRITTVEKDIRNLAKLTMLSIRENKIK-----------QLPAEIGELC---------NLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTL-ARNCFQSYPVG-GPS-QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKD---------NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLA-SLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQL-TTLPRGIGHLTNLTHLGL---GENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLK 556 HSP 2 Score: 114.39 bits (285), Expect = 2.636e-26 Identity = 127/471 (26.96%), Postives = 228/471 (48.41%), Query Frame = 2
Query: 272 SSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQ-EEEPKSFG--PGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSL-HSI----PVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLT 1651
SS + LT+L L +N + + ++ L L L +S+N+++SLPDS+ NL +L+ ++ NK++++P + L TL +N + ++ K + L+ LT++ + N+I + P +I EL L LD+++NQ+ +P + + LDL N+L E G + ++++ L NRL+ P L + L+E++L +N IS + + LS + N+ +LT+A N P + + +L +ME + I+ PF + R+ + S L M++ Q P FG + LN AT +Q I L+ + LS+ +L L H I ++ ++L NK P +I D LQ L L+NNQ++ LP I L+ L L + N ++ LPE + + L L+ N +++P ++ + L + + +C L+
Sbjct: 100 SSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVTSLTTLYLRFNRITTVEKDIRNLAKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYP---------VGGPSQFSTIYSL-----NMEHNR---INKIPFGIFSRAKVLS-------KLNMKDNQLTSLPLDFGTWTSMVELNLAT--------NQLTKIPEDICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKD-LQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLS 537
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:334130]) HSP 1 Score: 312.383 bits (799), Expect = 4.696e-98 Identity = 195/581 (33.56%), Postives = 329/581 (56.63%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISE--IPNSVYKINM-PNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRI 1858
+ LL+ A+ SG LNLA R + E +P +V++IN+ P + + F S WW+ LTKLIL +N + +S D+ LL L+ LD+ DN ++ LP + L L+ N++ NK+Q LP+ + L +L +N L+ + + L+ L +DLS N ++ P + +L +TKL+++ N++ +P ++ + L L+ + N L++ G A + Q++L NRL P + LKE+ + +N ISE+ +HL + I L + +NK+ ++P+E+++L L LDL+NND+ +LP +LG++ +LK L+++GNP R ++R IIN G I ++LR R EEP + T+ G I+ + A + S + AD+ DE+ ++ V ++ + N+ S P +I + D + D+++ N+IS L + L L LD+ N + LP + +S L I+S N IP V+ R+ L+TL+ S + ++D ++ L L L++ NN I+ +PP+LGLC ++SL L GN F+ PRPA++SKGTA+++EYLR RI
Sbjct: 28 QGLLRAARTSGQLNLAGRGLGEGSVPLAVWRINVDPPEEVARGVVFGASGERWWEQADLTKLILASNRLRALSDDLQLLPALTVLDVHDNQLTELPQVLGELVNLQKLNVSHNKLQTLPESLWAISSLLSLHVEHNELEGISNNIGNLARLEELDLSSNRLTALPGTLGKLTRVTKLNVAENKLRELPTEIKSMKGLCQLEATHNLLESVPAALGGMASLQQLYLRHNRLKSLPELHNCAALKELHVGNNQISELGPEHLRPLGAISVLDLRDNKLKELPDEVTLLHGLERLDLTNNDISSLPNALGNLGKLKSLALEGNPLRAIRRDIINRGTQEILKFLRSRI---EEPTGSEDSPDTVTAMTLPSQGG-INAFTISAQKALHYSGKKAADIPDEVFEAIRGSTVTAVDFSKNQLSTIPPRIVELKDMVTDVNVGFNKISVLSLELCMLGNLTHLDLRNNALSSLPNEMEALSRLQSIIISCNRF-REIPPVLYRVGTLETLLASDNQIGVVDATGLRSLERLGTLDLQNNDITVVPPQLGLCVSLRSLLLGGNRFRSPRPALLSKGTATLLEYLRDRI 603
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004940.1 (pep scaffold:Pmarinus_7.0:GL476356:339323:347865:-1 gene:ENSPMAG00000004448.1 transcript:ENSPMAT00000004940.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 105.916 bits (263), Expect = 2.705e-24 Identity = 127/530 (23.96%), Postives = 247/530 (46.60%), Query Frame = 2
Query: 368 SHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIPVK--------GINLNGNKFSIFP--------LKIFQFSDSL--------------QDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNC--FKVPRPAIISKGTASVMEYLR 1849
+ LD++ +I+SLP +I LTQL + N++ LP +I + L TL+ + N+L LP L L++L ++DL HN++ PP + L LT L L +N+IT + + L L +L + +NK++ A + ++ ++L + + HN + + ++ + + L + +N++ D+P+ I L SL+ L L N + A+P +L + +L+ L+++ N L +++S ++ RN + P GP Q ++ + I + RA + KL+ ++ N L S+P+ +NL N+ + P L+I S++L ++LDL N++ LPN I+ L L++L ++ N++ LP + + L+H ++ N + + +P+ + + L+ L ++ D + L P EL LC K+ ++++ NC ++P P I+S G + +++YL+
Sbjct: 52 TRLDLAKRSIASLPPNIKELTQLTELYLYGNRLPCLPTEIGCLVNLVTLALNENSLTGLPDTLTGLTSLRMLDLRHNKLRSIPPVVYRLTSLTVLYLRFNRITQVEKDIGNLSKLTMLSVRENKIKLLP----AEIGEL----------------RSLLTLDVAHNQLEHLPEE-IGNCVQVTNLDLQHNELLDLPDSIGNLASLNRLGLRYNRLSAVPTTLANCTELEDLNLENNNISTLPEGLLSS-LVNLSSLTLARNCFQAYPVG-GPS-QFTTVYSLNMEHNHIGKIPFGIFSRAKALSKLNMKD---------NQLTSLPLDIGTWKSMVELNLATNQLTKIPDDISELTSLEILVLSNNLLRKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTSLPRGIGHLCSLTHLMVGENQLTH-VPEEIGTLENLEELYLN-------DNPNLHNL----------------PFELALCSKLLIMSIE-NCPLSQLPGP-IVSSGPSFIIQYLK 522 HSP 2 Score: 97.0561 bits (240), Expect = 1.766e-21 Identity = 122/466 (26.18%), Postives = 211/466 (45.28%), Query Frame = 2
Query: 299 TKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXX-MKALPLSLGDMEQLKC---LSIDGN-----PFRMLKRSIINSGADSIKRYLRMRNTQEEE-PKSFGP--GLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLT 1651
T+L L SI+ + +I L +L+ L + N + LP I L L +N+N + LPD + L+ L +N L+S+P + L++LT++ L N I++ I L LT L + N+I +P + L +L LD++ N+L+ E G C V + L N L P + N +L + L +N +S + L+ + L + NN I+ +PE + + + +A P+ G Q L+++ N PF + R A ++ + L M++ Q P G + LN AT + D ++L + I+ LS L L + N ++ ++L NK P +I D LQ L L+NNQ++ LP I L L L + N++ +PE + + L L+ N + +P ++ + L + + +C L+
Sbjct: 52 TRLDLAKRSIASLPPNIKELTQLTELYLYGNRLPCLPTEIGCLVNLVTLALNENSLTGLPDTLTGLTSLRMLDLRHNKLRSIPPVVYRLTSLTVLYLRFNRITQVEKDIGNLSKLTMLSVRENKIKLLPAEIGELRSLLTLDVAHNQLEHLPEEIGNCVQVTNLDLQHNELLDLPDSIGNLASLNRLGLRYNRLSAVPTT-LANCTELEDLNLENNNISTLPEGLLSSLVNLSSLTLARNCFQAYPV--GGPSQFTTVYSLNMEHNHIGKIPFGIFSR------AKALSK-LNMKDNQLTSLPLDIGTWKSMVELNLATNQLTKIPDDISELTSLEILVLSNNLLRKLPHGLGNLRK---LRELDLEENKLESLPNEIAYLKD-LQKLVLTNNQLTSLPRGIGHLCSLTHLMVGENQLTHVPEEIGTLENLEELYLNDNPNLHNLPFELALCSKLLIMSIENCPLS 503 HSP 3 Score: 92.4337 bits (228), Expect = 6.892e-20 Identity = 87/297 (29.29%), Postives = 147/297 (49.49%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHV---NRLTKFPIVLPNK--NLKEISLTHNMISEI---------------TKD-HLSKIP-------NICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSI 1102
L L L N + I + L L+ L + N I+ + I NL++L ++ +NKI+ LP +I L TL ++N L+ LP+ + +T +DL HNE+ + P I L L +L L YN+++++P TL L+ L+L N + T EG + + + N +P+ P++ + +++ HN I +I KD L+ +P ++ L +A N++ IP++IS LTSL L LSNN ++ LP LG++ +L+ L ++ N L I
Sbjct: 120 LRMLDLRHNKLRSIPPVVYRLTSLTVLYLRFNRITQVEKDIGNLSKLTMLSVRENKIKLLPAEIGELRSLLTLDVAHNQLEHLPEEIGNCVQVTNLDLQHNELLDLPDSIGNLASLNRLGLRYNRLSAVPTTLANCTELEDLNLENNNISTLPEGLLSSLVNLSSLTLARNCFQAYPVGGPSQFTTVYSLNMEHNHIGKIPFGIFSRAKALSKLNMKDNQLTSLPLDIGTWKSMVELNLATNQLTKIPDDISELTSLEILVLSNNLLRKLPHGLGNLRKLRELDLEENKLESLPNEI 416 HSP 4 Score: 89.7373 bits (221), Expect = 3.901e-19 Identity = 72/266 (27.07%), Postives = 133/266 (50.00%), Query Frame = 2
Query: 95 IGNSESQNNKAFENLLKQAKKSGS-LNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEI 880
I +S N + + L K +++ + L+LA R+I+ +P PN+ + LT+L L N + + +I L L L +++N+++ LPD++T LT L+ ++ NK++ +P + L L +N + + K + LS LT++ + N+I P +I EL L LD+++NQ+ +P + + LDL N+L + G A ++++ L NRL+ P L N L++++L +N IS +
Sbjct: 29 IPRKKSSNMEVVKELNKCKEQNATRLDLAKRSIASLP--------PNIKELTQ---------------LTELYLYGNRLPCLPTEIGCLVNLVTLALNENSLTGLPDTLTGLTSLRMLDLRHNKLRSIPPVVYRLTSLTVLYLRFNRITQVEKDIGNLSKLTMLSVRENKIKLLPAEIGELRSLLTLDVAHNQLEHLPEEIGNCVQVTNLDLQHNELLDLPDSIGNLASLNRLGLRYNRLSAVPTTLANCTELEDLNLENNNISTL 271 HSP 5 Score: 74.3294 bits (181), Expect = 3.115e-14 Identity = 67/216 (31.02%), Postives = 103/216 (47.69%), Query Frame = 2
Query: 167 LNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLT--KLILTANSISFISKDI-SLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVN 799
LNL N NIS +P + + + + + Q+ F T L + N I I I S LS L++ DN ++SLP I + N+ N++ K+PD I L+ L S N L+ LP GL L L +DL N++ P +I L L KL L+ NQ+TS+P + L +L L + +N+L E G + +++L+ N
Sbjct: 261 LNLENNNISTLPEGLLSSLVNLSSLTLARNCFQAYPVGGPSQFTTVYSLNMEHNHIGKIPFGIFSRAKALSKLNMKDNQLTSLPLDIGTWKSMVELNLATNQLTKIPDDISELTSLEILVLSNNLLRKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTSLPRGIGHLCSLTHLMVGENQLTHVPEEIGTLENLEELYLNDN 476
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Match: scrib (scribble planar cell polarity protein [Source:NCBI gene;Acc:368473]) HSP 1 Score: 98.2117 bits (243), Expect = 1.671e-21 Identity = 86/282 (30.50%), Postives = 135/282 (47.87%), Query Frame = 2
Query: 290 VFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSI 1126
+ L L ++ N I+ I I L L +D S N ++ LP+ T L L Y ++N +Q LPD I N L TL N LK+LP L+ L L +DL +NE+ P + L + +L L NQ+ ++P + L L LD+SQN+L+ + G A + N L + P L K+L + N ++ + + + N+ L + N++ +P I LT L+NL+L N + ++P +G L LS+ N + I SGA I
Sbjct: 29 MHLVDLDMSRNDIAEIPDSIKLCTCLEVVDFSGNPLTRLPEGFTQLKSLIYLSLNDVSLQGLPDDIGNLSNLVTLELRENLLKTLPTSLHLLVKLEQLDLGNNELETLPGSLGSLPNVRELWLDGNQLEALPSEIGELRRLVCLDISQNRLERLPDAIGGLAALTDFLASQNHLEELPEELGKLKHLSILKADQNRLTHLP-EAIGDCENLTELILTENQLVTLPASIGKLTKLTNLNLDKNRLNSIPPEIGGCGALNVLSLRDNRLTQVPGEI--SGASQI 307 HSP 2 Score: 88.5817 bits (218), Expect = 1.857e-18 Identity = 78/259 (30.12%), Postives = 124/259 (47.88%), Query Frame = 2
Query: 356 LDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTF--SEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMIS-EITKDHLSKIPN----ICTLT---IANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSI 1102
L L L +SDN + LP I N L ++++N I ++PD I+ L+ + S N L LP+G L +L + L+ + P I L L L+L N + ++P +L L L+ LDL N+L+T S G V ++WL N+L P EI ++ +I+++ L ++P+ + LT + N + ++PEE+ L LS L N + LP ++GD E L L + N L SI
Sbjct: 5 LHNLRKLGLSDNELQRLPPDIANFMHLVDLDMSRNDIAEIPDSIKLCTCLEVVDFSGNPLTRLPEGFTQLKSLIYLSLNDVSLQGLPDDIGNLSNLVTLELRENLLKTLPTSLHLLVKLEQLDLGNNELETLPGSLGSLPNVRELWLDGNQLEALP--------SEIGELRRLVCLDISQNRLERLPDAIGGLAALTDFLASQNHLEELPEELGKLKHLSILKADQNRLTHLPEAIGDCENLTELILTENQLVTLPASI 255 HSP 3 Score: 86.2705 bits (212), Expect = 1.035e-17 Identity = 61/231 (26.41%), Postives = 110/231 (47.62%), Query Frame = 2
Query: 290 VFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILT 976
V L +L L N + + + L + L + N + +LP I L +L +I++N++++LPD I L S N L+ LP+ L L +L+I+ N ++ P I + LT+L L+ NQ+ ++P ++ +L L L+L +N+L + G C ++ + L NRLT+ P +S I L +A N++ ++P E++ L+
Sbjct: 121 VKLEQLDLGNNELETLPGSLGSLPNVRELWLDGNQLEALPSEIGELRRLVCLDISQNRLERLPDAIGGLAALTDFLASQNHLEELPEELGKLKHLSILKADQNRLTHLPEAIGDCENLTELILTENQLVTLPASIGKLTKLTNLNLDKNRLNSIPPEIGGCGALNVLSLRDNRLTQVP-----------------------GEISGASQIHVLDLAGNRLENLPIELAKLS 328 HSP 4 Score: 57.3806 bits (137), Expect = 8.193e-9 Identity = 36/121 (29.75%), Postives = 65/121 (53.72%), Query Frame = 2
Query: 320 NSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSM 682
N ++ + + I + L+ L +++N + +LP SI LT+L N++KN++ +P +I L LS N L +P ++ S + ++DL+ N + P ++ +L L L LS NQ M
Sbjct: 223 NRLTHLPEAIGDCENLTELILTENQLVTLPASIGKLTKLTNLNLDKNRLNSIPPEIGGCGALNVLSLRDNRLTQVPGEISGASQIHVLDLAGNRLENLPIELAKLS-LKALWLSENQSQPM 342 HSP 5 Score: 56.225 bits (134), Expect = 2.307e-8 Identity = 87/361 (24.10%), Postives = 154/361 (42.66%), Query Frame = 2
Query: 836 NLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKR--YLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHS-IPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIV-TN*RVSIESLIQFLD 1906
NL+++ L+ N + + D ++ ++ L ++ N IA+IP+ I + T L+ + GNP L G +K YL + + LQ L DD G + + +V L R +L + SLH + ++ ++L N+ P + + +++L L NQ+ LP+ I L L LDIS N++ LP+++ ++ L+ F+ S N + +P+ + ++ +L L LT + E I NL L ++ N + +P +G K+ +LNLD N P I G +V+ +R+ +S S I LD
Sbjct: 7 NLRKLGLSDNELQRLPPD-IANFMHLVDLDMSRNDIAEIPDSIKLCTC-----------------------LEVVDFSGNPLTRLP-----EGFTQLKSLIYLSLNDVS----------LQGL-----PDDIGNL-------SNLVTLELRE--NLLKTLPTSLHLLVKLEQLDLGNNELETLPGSLGSLPN-VRELWLDGNQLEALPSEIGELRRLVCLDISQNRLERLPDAIGGLAALTDFLASQNHL-EELPEELGKLKHLSILKADQNRLTHLP-EAIGDCENLTELILTENQLVTLPASIGKLTKLTNLNLDKNRLNSIPPEIGGCGALNVLSLRDNRLTQVPGEISGASQIHVLD 311
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008655.1 (pep scaffold:Pmarinus_7.0:GL484079:6946:12214:1 gene:ENSPMAG00000007829.1 transcript:ENSPMAT00000008655.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 77.411 bits (189), Expect = 2.650e-16 Identity = 49/147 (33.33%), Postives = 81/147 (55.10%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQN 736
L ++ L N I + K++ L L L ++DN+++SLP +I L L+ + ++N+++ +PD I + +L ++ S NTL LP GL L +LT + LS + P + L L L+L N + S+P + RL L+ LDL N
Sbjct: 50 LQEIHLDGNYIQELPKELCALPLLRVLSVADNDLASLPPAIGGLAGLRRIDASRNELRDIPDNIRSCRQLSVVNVSNNTLSRLPDGLTQLVSLTELYLSDVLLEFLPASLGRLCKLRVLELRDNHLNSLPKAMHRLSQLRRLDLGCN 196 HSP 2 Score: 68.5514 bits (166), Expect = 2.686e-13 Identity = 45/150 (30.00%), Postives = 74/150 (49.33%), Query Frame = 2
Query: 293 FLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKL 742
L L + N ++ + I L L +D S N + +PD+I + QL N++ N + +LPD + + L L S L+ LP L L L +++L N ++ P ++ L L +LDL N + +P L++L LQ L + N L
Sbjct: 72 LLRVLSVADNDLASLPPAIGGLAGLRRIDASRNELRDIPDNIRSCRQLSVVNVSNNTLSRLPDGLTQLVSLTELYLSDVLLEFLPASLGRLCKLRVLELRDNHLNSLPKAMHRLSQLRRLDLGCNDFSHVPPVLQQLTTLQELLMDGNSL 221 HSP 3 Score: 62.003 bits (149), Expect = 4.139e-11 Identity = 49/206 (23.79%), Postives = 91/206 (44.17%), Query Frame = 2
Query: 68 SNDNSLFIDIGNSESQNNKAFENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMP 685
+D SL +D+ ++ A+ ++L I E+P + + + V + L ++ + N + I +I +LS +++S+N +S LPD +T L L ++ ++ LP + +L+ L N L SLPK ++ LS L +DL N+ S PP + +L L +L + N + +P
Sbjct: 20 GDDGSLILDLSHTRLHTVPPQVYTPASAQSLQEIHLDGNYIQELPKELCALPLLRVLSVADNDLASLPPAIGGLAGLRRIDASRNELRDIPDNIRSCRQLSVVNVSNNTLSRLPDGLTQLVSLTELYLSDVLLEFLPASLGRLCKLRVLELRDNHLNSLPKAMHRLSQLRRLDLGCNDFSHVPPVLQQLTTLQELLMDGNSLLILP 225 HSP 4 Score: 51.6026 bits (122), Expect = 1.199e-7 Identity = 47/175 (26.86%), Postives = 83/175 (47.43%), Query Frame = 2
Query: 374 LDISDNNISSLPDSI---TNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTF--SEGFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEI 880
LD+S + ++P + + L+ +++ N IQ+LP ++ L+ LS + N L SLP + L+ L +D S NE+ + P I L+ +++S N ++ +P L +L +L L LS L+ S G + + L N L P + L+ + L N S +
Sbjct: 27 LDLSHTRLHTVPPQVYTPASAQSLQEIHLDGNYIQELPKELCALPLLRVLSVADNDLASLPPAIGGLAGLRRIDASRNELRDIPDNIRSCRQLSVVNVSNNTLSRLPDGLTQLVSLTELYLSDVLLEFLPASLGRLCKLRVLELRDNHLNSLPKAMHRLSQLRRLDLGCNDFSHV 201 HSP 5 Score: 48.1358 bits (113), Expect = 1.890e-6 Identity = 45/176 (25.57%), Postives = 92/176 (52.27%), Query Frame = 2
Query: 1262 IVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCF 1789
I+ LS L + ++ + ++ I+L+GN P ++ L+ L +++N ++ LP I L+GLRR+D S N++R +P+++ LS +S N + + +PD ++++ L L +S L + + L L VL + +N ++++P + +++ L+L N F
Sbjct: 26 ILDLSHTRLHTVPPQVYTPASAQSLQEIHLDGNYIQELPKELCALP-LLRVLSVADNDLASLPPAIGGLAGLRRIDASRNELRDIPDNIRSCRQLSVVNVSNNTL-SRLPDGLTQLVSLTELYLSDVLLEFLP-ASLGRLCKLRVLELRDNHLNSLPKAMHRLSQLRRLDLGCNDF 198
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Match: lrch3 (leucine-rich repeats and calponin homology (CH) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071004-44]) HSP 1 Score: 75.0998 bits (183), Expect = 5.658e-15 Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = 2
Query: 311 LTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGF 763
L+ N ++ + ++ L L + N I S+P++I NL L Y NI++N++ LP + L LQ L+ S N L SLP+ L L L+ +D+S NEI PPQ+ L L L++ N + +P + L +Q LD+S N+L F
Sbjct: 5 LSKNRLNEVPLEVCHFVSLESLVLYHNCIRSIPEAIVNLRSLTYLNISRNQLTTLPPYL-CKLPLQVLNASNNKLVSLPEELGQLKELSALDVSCNEIQALPPQVASLTCLRDLNVRRNNLVILPDEIADLPLVQ-LDVSCNRLGEIPVSF 153 HSP 2 Score: 64.6994 bits (156), Expect = 1.462e-11 Identity = 54/233 (23.18%), Postives = 113/233 (48.50%), Query Frame = 2
Query: 446 NINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRM 1144
+++KN++ ++P ++ +++ L++L +N ++S+P+ + L +LT +++S N+++ PP + +L L L+ S N++ S+P L +L L LD+S N++Q P V L+++++ N + I D ++ +P + L ++ N++ +I P+S ++QL+ L +D NP + I G I +YL M
Sbjct: 4 DLSKNRLNEVPLEVCHFVSLESLVLYHNCIRSIPEAIVNLRSLTYLNISRNQLTTLPPYLCKLPLQV-LNASNNKLVSLPEELGQLKELSALDVSCNEIQALP--------------------PQVASLTCLRDLNVRRNNLV-ILPDEIADLP-LVQLDVSCNRLGEI-----------------------PVSFRKLKQLQSLVLDNNPMKSPPAQICIKGKHHIFKYLHM 190 HSP 3 Score: 50.8322 bits (120), Expect = 5.438e-7 Identity = 48/187 (25.67%), Postives = 80/187 (42.78%), Query Frame = 2
Query: 1313 NSLHSIPVKGINLNG--------NKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLV-MSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYL 1846
N + SIP +NL N+ + P + + LQ L+ SNN++ LP + L L LD+S N+I+ LP ++ ++CL + N++ +PD ++ + +Q V + G + + K+K L +SL LD N K P I KG + +YL
Sbjct: 31 NCIRSIPEAIVNLRSLTYLNISRNQLTTLPPYLCKLP--LQVLNASNNKLVSLPEELGQLKELSALDVSCNEIQALPPQVASLTCLRDLNVRRNNLV-ILPDEIADLPLVQLDVSCNRLGEIPVSFRKLKQL--------------------------QSLVLDNNPMKSPPAQICIKGKHHIFKYL 188
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Yeast
Match: CYR1 (Adenylate cyclase; required for cAMP production and cAMP-dependent protein kinase signaling; the cAMP pathway controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation [Source:SGD;Acc:S000003542]) HSP 1 Score: 92.4337 bits (228), Expect = 1.008e-19 Identity = 117/450 (26.00%), Postives = 196/450 (43.56%), Query Frame = 2
Query: 326 ISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNK------------LQTFSEGF---------CAPVHQIWLHVNRLTKFPIVLPN---------------------KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPK-----SFGPGLQALNRATIKDDSGFIDQ--------TDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIR 1510
+ FI I LL L + + S P +IT +L + +N I+K+P+ I L L+ N L+SLP G L NL ++DLS N+ +P IN L ++DLSYN+I S+P + + L L ++LS NK L+T + + + + ++L NR++ F LP KN+ ++L +S I + L+K+ + L + N + +P+EIS LT L L ++ N ++ +P L ++ L+ L + N R + N S+ E S+G L I D+ F D +L+ ++ LS+ N +D+S L S + + L+GNK + SL+ L L++NQ+ LP +S+LS L D+ N+++
Sbjct: 833 LEFIESSIKLLS----LRMVNIRASKFPSNITKAYKLVSLELQRNFIRKVPNSIMKLSNLTILNLQCNELESLPAGFVELKNLQLLDLSSNKFMHYPEVINYCTNLLQIDLSYNKIQSLPQSTKYLVKLAKMNLSHNKLNFIGDLSEMTDLRTLNLRYNRISSIKTNASNLQNLFLTDNRISNFEDTLPKLRALEIQENPITSISFKDFYPKNMTSLTLNKAQLSSIPGELLTKLSFLEKLELNQNNLTRLPQEISKLTKLVFLSVARNKLEYIPPELSQLKSLRTLDLHSNNIRDFVDGMENLELTSLNISSNAFGNSSLENSFYHNMSYGSKLSKSLMFFIAADNQFDDAMWPLFNCFVNLK---VLNLSYNNFSDVSHMKLES-----ITELYLSGNKLTTLSGDTVLKWSSLKTLMLNSNQMLSLPAELSNLSQLSVFDVGANQLK 1270
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Yeast
Match: CCR4 (Component of the CCR4-NOT transcriptional complex; CCR4-NOT is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening [Source:SGD;Acc:S000000019]) HSP 1 Score: 54.6842 bits (130), Expect = 4.035e-8 Identity = 35/108 (32.41%), Postives = 55/108 (50.93%), Query Frame = 2
Query: 422 NLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQ 745
+L+ L+ FNI+ N I Y L L + N+L LP + LSNL ++DLSHN ++ P ++ + L N +T++P+ L NLQ L + N L+
Sbjct: 340 DLSNLQIFNISAN--------IFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLE 439 HSP 2 Score: 52.373 bits (124), Expect = 1.884e-7 Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 2
Query: 293 FLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLK 538
FLT+L L NS++ + +I L L LD+S N ++SLP + + QLKYF N + LP + N LQ L N L+
Sbjct: 358 FLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLE 439
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Yeast
Match: SOG2 (Key component of the RAM signaling network; required for proper cell morphogenesis and cell separation after mitosis [Source:SGD;Acc:S000005880]) HSP 1 Score: 48.1358 bits (113), Expect = 3.737e-6 Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 2
Query: 299 TKLILTANSISFIS-KDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYL--LTKLDLSYNQITSMP--FTLERLHNLQILDLSQNKL 742
T L L A +I IS +D+ + + L + N+++SLP S L++L+Y +++ N +++P Y+ L P+ L I+DLS NEI P +I+ + + L L N +TS+ ++ +L+ L ILDL NK+
Sbjct: 45 TTLKLIALNIKSISDEDVGYIQNVERLSLRKNHLTSLPASFKRLSRLQYLDLHNNNFKEIP-----YI-----------LTQCPQ-------LEILDLSSNEIEALPDEISSFWQDNIRVLSLKDNNVTSIRNLKSITKLNKLSILDLEDNKI 174
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Match: EDO48217 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKB1]) HSP 1 Score: 301.597 bits (771), Expect = 8.599e-94 Identity = 207/601 (34.44%), Postives = 330/601 (54.91%), Query Frame = 2
Query: 77 NSLFIDIGNSESQNNKAFENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGF--CAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMR-----NTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRI 1858
NS F+ +++ + + +LKQ +KSG LNL+NR ++E+P V++IN+ + KS+S + D WWD V LTKLIL +NS++ IS D+ L L LDI DN++++LP+ I +L+ L+ N+ NKI LP + L +L +N+ KSL L L NL +D+S+N +S P + L L L+LS N + +P + L L L++S NK+ F + ++ N LT P V +LKE+ L +N I+E+ + + L + +N + IPE+I IL L LDL+NND+ LP +G+M LK L ++GNP R L+R I+ G +I ++L+ R ++ S P L ++ +D L T + S + A + E+L + + VK ++ + N + P +I S S+ DL+L N+I+ LP+ I S + L LD+ N++ LP+ + + L I+SYN + +P V+ M L+TL+ + +ID + + +S LE L++ NN IS +PPELG +K+L L GN F+ PR AI++KGT +++EYLR RI
Sbjct: 7 NSGFVGRQSAQEEKGSISDAVLKQGRKSGQLNLSNRGLTEVPEKVWRINLDVPEEAKSVSLDCEDR-WWDQVDLTKLILASNSLTEISGDVFNLPALVLLDIHDNSLTTLPEEIGSLSCLQKLNLGHNKISSLPMSMAQLESLCSLKLEHNSFKSLECWLGSLRNLEELDVSYNMVSSL-PSLAGLKHLRTLNLSNNALEMLPPEFDHLQALDDLNISSNKICNFPGKLYNMKSLRRLDCRQNHLTSVPSVGQCPSLKELYLAYNKIAELDSKVFAGYSGLTVLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGLPYKIGNMSNLKSLVLNGNPLRELRRDIVMRGTQAIMKHLKSRIPDDDGATDQPDASVAP----LPSVSMGSSGAVVDMHTLGHTKTLNYSGKKSASIPVEVLEAAVTSEVKTVDFSKNMLTDLPERITALSSSVSDLNLGFNKITSLPSGICSFTQLEFLDLRNNQLSSLPDGFASLRSLREIIISYNRF-SCLPPVLYSMTSLRTLLACDNQIAVIDVDGLLRMSVLETLDLQNNNISQVPPELGNVRGLKALQLGGNPFRTPRAAILAKGTQALLEYLRDRI 600
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Match: EDO37499 (Leucine-rich repeat protein soc-2 homolog [Source:UniProtKB/Swiss-Prot;Acc:A7SFP1]) HSP 1 Score: 112.849 bits (281), Expect = 4.250e-26 Identity = 106/371 (28.57%), Postives = 173/371 (46.63%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQI-----------------------------------ENYLE-----------LQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMP-----------FTLE-------------RLHNLQILDLSQNKLQTFSEG----FCAPVHQIWLHVNRLTKFPIVLPNKN--LKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFG 1180
L +L L N I+ + ++ LL L L +S+NN+++LPD++ LT+LK ++ NKI+++PD I EN ++ L TL S+N +++LP + ++T +DL HN+I P I L +T+L L YNQ++S+P F +E L NL L LS+NK + F G FC V+ + NR+ K P + NK L ++++ N ++ + D S I ++ L +A N+I+ +PE+I L +L L LSNN +K LP +G + +L+ L I+ N + I S++R + N P+S G
Sbjct: 111 LRELYLYGNRIAVLPPEVGLLPNLETLALSENNLTTLPDNLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGNLKLLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSIGRLTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNKFEVFPAGPPKQFCQ-VNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLDFGSWI-SLVELNVATNQISKLPEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIPTEI--EYLRSLERLVLQSNCLGSLPRSIG 477 HSP 2 Score: 109.768 bits (273), Expect = 3.867e-25 Identity = 136/504 (26.98%), Postives = 235/504 (46.63%), Query Frame = 2
Query: 368 SHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVK-LSFRNLADLSDEILNSLHSIPVK--------GINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPA-IISKGTASVMEYLR 1849
+ LD+S ++ LP + LT L+ + N+I LP ++ L+TL+ S N L +LP L L+ L ++DL HN+I E P I +L LT L L +N+I+ + + L L+ L L +NK++ VH + L + +HN I + + + ++ +L + +N I +P+ I LT+++ L L N + +LP SL + + +I+GN L +++S + L RN E P GP Q T + + + K LS N+ D N L S+P+ +N+ N+ S P I Q+ +L+ L LSNN + +LP I +L LR LDI NK+ +P + + L +L N +G ++P + ++ + L + L + E M S ++ N + ++P EL LC ++ ++++ NC P+ I++ G + V++YLR
Sbjct: 89 TRLDLSKAAVTVLPKELKELTSLRELYLYGNRIAVLPPEVGLLPNLETLALSENNLTTLPDNLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGNLKLLERLSLRENKIKILPRVIGQLVHLVTLDI--------------------SHNHIENLPAE-IGNCVHMTSLDLQHNDIPSLPDSIGRLTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLS-RNKFEVFPA--GPPKQFCQVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKD------NQLTSLPLDFGSWISLVELNVATNQISKLPEDI-QWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIPTEIEYLRSLERLVLQSNCLG-SLPRSIGYLSSVTYLSVGENELVSVPQEIGNMESLEQLYLNDNENLQSLPYELVLCGSLQIMSIE-NCPLSALPSQIVAGGPSLVIQYLR 559 HSP 3 Score: 81.2629 bits (199), Expect = 4.446e-16 Identity = 97/416 (23.32%), Postives = 171/416 (41.11%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNIS-----------------------SLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLP-KGLNCLSNLTIMDLSHNEISEFPP-------QINELYL-----------------------------------------LTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEIS-ILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRN 1150
+NL+K K L+L + I EIP+ +YK+ + +S + L +L L N I + + I L L LDIS N+I SLPDSI LT + + N++ LPD + N + + N + LP K L+ L NLT + LS N+ FP Q+N + L +L+++ NQI+ +P ++ L NL++L LS N L+ G A + + + N+L P + ++L+ + L N + + + + + ++ L++ N++ +P+EI + + N ++++LP L L+ +SI+ P L I+ G + +YLR++
Sbjct: 149 DNLVKLTKLK-VLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGNLKLLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSIGRLTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNKFEVFPAGPPKQFCQVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLDFGSWISLVELNVATNQISKLPEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIPTEIEYLRSLERLVLQSNCLGSLPRS-IGYLSSVTYLSVGENELVSVPQEIGNMESLEQLYLNDNENLQSLPYELVLCGSLQIMSIENCPLSALPSQIVAGGPSLVIQYLRLQG 562
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Match: EDO38039 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SE32]) HSP 1 Score: 89.7373 bits (221), Expect = 4.179e-19 Identity = 106/427 (24.82%), Postives = 194/427 (45.43%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNC-LSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIAD--IPEEISILTXXXXXX--XXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSG------ADSIKRYLRMRNTQEEE------PKSFGP--GLQAL----NRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFN 1501
+T L L N + + D+ L L+ L ++ N ++SLPD L L ++N+N +++LP+ + +L+ L+ + N L+ L L++LT + + N++SE + L L+L N I +P L L++++LSQN ++ E GF + + N + P + E N D +PNI L +++N+++D +P+ ++ + LS N + LP S+G++++LK L + G+ L+R +G DS + + +E P FG L+ L NR + DS +L ++LS +L +L + N + ++ L+ N+ S P ++ ++ LDL N++SE+P + L L RLD+ N
Sbjct: 1 ITTLKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARLGNLTELHLNENSLEELPESLGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELSVSFTLMKNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIENLPERFESACFLEHLYADNNNITWLPDWFGDLPNIINLCLSDNELSDSALPDHFGSISGKTLSSLDLSGNRITKLPDSMGELKELKTLHL-GSTINELERRAFQNGNWLSHLPDSFSQMANLTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDS----FCNLSKLWFLQLSKNHLTELPENFGNLTSLVELR---LDSNQLSSLPASFANLTN-VKTLDLYRNKLSEIPRVLLKLENLMRLDLDGN 418 HSP 2 Score: 85.5001 bits (210), Expect = 1.041e-17 Identity = 121/443 (27.31%), Postives = 195/443 (44.02%), Query Frame = 2
Query: 503 LQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFG--PGL-------QALNRATIKDDSGFIDQT-----DLRATGIVKL--SFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGN 1783
+ TL +N L+ LP L L++LT + L+ N ++ P L LT+L L+ N + +P +L +L L++L+L+ NKL+ + F A + +L E+ + N +SE++ + + N+ L + +N I +PE+ L L ++LS N+++ LP S G + LK I GN L A ++ N P FG P + L+ + + D G I DL I KL S L +L L S + + NGN S P Q ++ L L L NQ+ LP+ L L LD+ N+I +LP+S +S L LS N + +P+ + L L + L+ + L+N++ L++ N +S IP L E + L+LDGN
Sbjct: 1 ITTLKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARLGNLTELHLNENSLEELPESLGKLSKLRVLNLTGNKLEKLRDDFGAGL-------------------ASLTELRIDENDLSELSVS-FTLMKNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIENLPERF--ESACFLEHLYADNNNITWLPDWFGDLPNIINLCLSDNELSDSALPDHFGSISGKTLSSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHLPDSFSQMAN-LTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQLSKNHL-TELPENFGNLTSLVELRLDSNQLSSLPA-SFANLTNVKTLDLYRNKLSEIPRVLLKLENLMRLDLDGN 418 HSP 3 Score: 73.9442 bits (180), Expect = 5.634e-14 Identity = 58/186 (31.18%), Postives = 92/186 (49.46%), Query Frame = 2
Query: 149 AKKSGSLNLANRNISEIPNSVYKIN-------MPNVNDEKSISFEQSDS-SWWDDVF-----LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYN 667
K SL+L+ I+++P+S+ ++ +N+ + +F+ + S D F LTKL L N + + D L L LD+ N I LPDS NL++L + ++KN + +LP+ N L L N L SLP L+N+ +DL N++SE P + +L L +LDL N
Sbjct: 233 GKTLSSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHLPDSFSQMANLTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNKLSEIPRVLLKLENLMRLDLDGN 418 HSP 4 Score: 70.4774 bits (171), Expect = 6.899e-13 Identity = 59/207 (28.50%), Postives = 100/207 (48.31%), Query Frame = 2
Query: 179 NRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDV------FLTKLILTANSISFISKDISLLDKLSHLDIS-------------DNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKL 742
N NI+ +P+ + ++PN+ + E SDS+ D L+ L L+ N I+ + + L +L L + N +S LPDS + + L ++++N++ LPD + + L+ L N ++ LP LS L + LS N ++E P L L +L L NQ++S+P + L N++ LDL +NKL
Sbjct: 193 NNNITWLPD--WFGDLPNIINLCLSDNELSDSALPDHFGSISGKTLSSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHLPDSFSQMANLTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNKL 397
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Match: EDO33432 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SS78]) HSP 1 Score: 91.6633 bits (226), Expect = 4.560e-19 Identity = 81/295 (27.46%), Postives = 131/295 (44.41%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEG--FCAPVHQIWLHVNRLTKFPIVLPNKN------------------------LKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSI 1102
L + ++ N I I ++I L LD+S N IS LPD + L L +N + +LP I + EL L N +K LP L LS L +DL NE+ E P + L L + L N + ++P + L LQI D+S+NK++ + FC + + L N L + P + L+E+ LT N++ ++ + K+ + L + N++ +P E+ T LS L +N ++ LP +G+ L L + GN L +I
Sbjct: 31 LQEFDISRNDICDIPENIKYCKSLVSLDLSGNPISKLPDGFSQLQHLTTLCLNDVSLIRLPPDIGSLTELTVLEARENLIKFLPVSLAFLSKLERLDLGCNELEELPDVVGSLPSLAEFWLDGNLLKTLPTEIGNLKKLQIFDVSENKIEYLPDEICFCGSLTDLHLSQNLLEELPDTIGKLKKLQLLKVDQNRLITLTPAIGGCIALQELILTENLL-DVLPSTMGKLHKLSLLNVDRNRLEVLPVELGSCTKLSVFSLRDNLLQRLPTEIGNCRNLHVLDVSGNRLECLPLTI 324 HSP 2 Score: 84.3445 bits (207), Expect = 7.528e-17 Identity = 62/204 (30.39%), Postives = 102/204 (50.00%), Query Frame = 2
Query: 365 LSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEIS 967
+ L +SDN I+ LP + NL L+ F+I++N I +P+ I+ L +L S N + LP G + L +LT + L+ + PP I L LT L+ N I +P +L L L+ LDL N+L+ + G + + WL N L P + N K L+ ++ N I E D + ++ L ++ N + ++P+ I
Sbjct: 8 IRRLGLSDNEIARLPPEVGNLANLQEFDISRNDICDIPENIKYCKSLVSLDLSGNPISKLPDGFSQLQHLTTLCLNDVSLIRLPPDIGSLTELTVLEARENLIKFLPVSLAFLSKLERLDLGCNELEELPDVVGSLPSLAEFWLDGNLLKTLPTEIGNLKKLQIFDVSENKI-EYLPDEICFCGSLTDLHLSQNLLEELPDTIG 210 HSP 3 Score: 72.0182 bits (175), Expect = 5.004e-13 Identity = 74/300 (24.67%), Postives = 123/300 (41.00%), Query Frame = 2
Query: 140 LKQAKKSGSLNLANRNISEIPNSVYKINMPN---VNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFP-----------------------PQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE-------------------------GFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITK 886
+K K SL+L+ IS++P+ ++ +ND I S + LT L N I F+ ++ L KL LD+ N + LPD + +L L F ++ N ++ LP +I N +LQ S N ++ LP + +LT + LS N + E P P I L +L L+ N + +P T+ +LH L +L++ +N+L+ G C +H + + NRL P+ + LK + L+ N + K
Sbjct: 48 IKYCKSLVSLDLSGNPISKLPDGFSQLQHLTTLCLNDVSLIRLPPDIGSLTE---LTVLEARENLIKFLPVSLAFLSKLERLDLGCNELEELPDVVGSLPSLAEFWLDGNLLKTLPTEIGNLKKLQIFDVSENKIEYLPDEICFCGSLTDLHLSQNLLEELPDTIGKLKKLQLLKVDQNRLITLTPAIGGCIALQELILTENLLDVLPSTMGKLHKLSLLNVDRNRLEVLPVELGSCTKLSVFSLRDNLLQRLPTEIGNCRNLHVLDVSGNRLECLPLTIGTLPLKALWLSENQSQPVLK 344 HSP 4 Score: 48.521 bits (114), Expect = 8.647e-6 Identity = 41/126 (32.54%), Postives = 67/126 (53.17%), Query Frame = 2
Query: 1406 LQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGN 1783
++ L LS+N+I+ LP + +L+ L+ DIS N I +PE++ L LS N I + +PD S++ +L TL ++ L + + I L+ L VL N I +P L K++ L+L N
Sbjct: 8 IRRLGLSDNEIARLPPEVGNLANLQEFDISRNDICDIPENIKYCKSLVSLDLSGNPI-SKLPDGFSQLQHLTTLCLNDVSLIRLPPD-IGSLTELTVLEARENLIKFLPVSLAFLSKLERLDLGCN 131
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Match: EDO46974 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNR2]) HSP 1 Score: 85.8853 bits (211), Expect = 6.730e-18 Identity = 89/334 (26.65%), Postives = 161/334 (48.20%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLT-----------------------IMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHV--NRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMR-NTQEEEPKSFG--PGLQALNRAT 1210
L ++ L AN + + + + L L L +SDN ++ LP ++NL L+ + +KN I +P+ I++ LQ + S N + +P+ L+NLT I++L N + P +++L L +LD+ N+ T +P + L NL L + N ++ ++L V NRL P + + ++L ++ L++N++ EI + + + + TL + N + ++P I L L L L+ N++ +LP SLG + +L+ L+ID N + + + A +I L +R N P S G P LQ +N A+
Sbjct: 27 LEEVYLDANQLRDLPRGLFNLQNLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLSNNLLIEI-PEQIGALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNIDENFLESIPSELGSCTAMTI---LSLRDNRLVHLPDSIGRMPKLQVINLAS 356 HSP 2 Score: 77.7962 bits (190), Expect = 3.406e-15 Identity = 76/265 (28.68%), Postives = 123/265 (46.42%), Query Frame = 2
Query: 314 TANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRS 1099
+ N I I + L L+HL ++D + LP + L L+ + +N ++ LP + L+ L N LP + CL NLT + + N I E P+I L L LD+S N++ +P +E L +L L LS N L E G + + L N L + P + L+E+ LT N + + L + + L I N + IP E+ T+++ L L +N + LP S+G M +L+ +++ N L S
Sbjct: 102 SVNPIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLSNNLLIEIPEQIGALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLPPS-LGYLRKLRVLNIDENFLESIPSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYLPYS 365 HSP 3 Score: 72.4034 bits (176), Expect = 1.418e-13 Identity = 43/166 (25.90%), Postives = 88/166 (53.01%), Query Frame = 2
Query: 311 LTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGF--CAPVHQIWLHVNR 802
++ N + ++ +I L L+ L +S+N + +P+ I L +L+ + +N + +LP+ I +EL+ L + N L SLP L L L ++++ N + P ++ +T L L N++ +P ++ R+ LQ+++L+ N+L+ F + +WL N+
Sbjct: 216 VSKNRLEWLPPEIESLQSLTDLYLSNNLLIEIPEQIGALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNIDENFLESIPSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYLPYSFHKLVSLKALWLSENQ 381 HSP 4 Score: 68.5514 bits (166), Expect = 2.630e-12 Identity = 44/148 (29.73%), Postives = 81/148 (54.73%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNK 739
LT L L+ N + I + I L KL L + +N++ LP+SI L +L+ + N++ LP + +L+ L+ N L+S+P L + +TI+ L N + P I + L ++L+ N++ +P++ +L +L+ L LS+N+
Sbjct: 234 LTDLYLSNNLLIEIPEQIGALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNIDENFLESIPSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYLPYSFHKLVSLKALWLSENQ 381 HSP 5 Score: 58.151 bits (139), Expect = 5.426e-9 Identity = 99/408 (24.26%), Postives = 181/408 (44.36%), Query Frame = 2
Query: 572 LTIMDLSHNEISEFPPQI---NELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGN 1783
+++++L H+ ++ + E L ++ L NQ+ +P L L NLQ+L LS N+L T P VL N NL+ + + N I +I + + N+ + + N I IPE L +L++L L++ + LP + G + L+ L + N R+L +S+ S +++R N E P G LN + DS I + + +L F ++++ N+ P +I SL DL LSNN + E+P I +L L+ L + N + LP S+ ++ L IL+ N++ ++P + + L+ L + L I E + + + +L++ +N + ++P +G K++ +NL N
Sbjct: 1 MSVLELRHSNLTTVSHDLFKSKEGKALEEVYLDANQLRDLPRGLFNLQNLQVLGLSDNEL---------------------TILPSVLSNLVNLRILDFSKNGIIDI-PETIKHCKNLQEIDASVNPIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLPKSM--SQLKNLERLDIGNNEFTELPMVVG---CLLNLTELWMDSNAIKELRPEIGLLRRLMF---------------------LDVSKNRLEWLPPEIESLQ-SLTDLYLSNNLLIEIPEQIGALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELV-SLPPSLGYLRKLRVLNIDENFLESIPSE-LGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASN 357 HSP 6 Score: 53.1434 bits (126), Expect = 2.219e-7 Identity = 40/149 (26.85%), Postives = 70/149 (46.98%), Query Frame = 2
Query: 155 KSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNE 601
K +L L ++ E+PNS+ K+ V L +LILT N + + + L KL L+I +N + S+P + + T + ++ N++ LPD I +LQ ++ + N L+ LP + L +L + LS N+
Sbjct: 256 KLQTLKLEENHLGELPNSIGKL-----------------------VELEELILTCNELVSLPPSLGYLRKLRVLNIDENFLESIPSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYLPYSFHKLVSLKALWLSENQ 381 HSP 7 Score: 51.2174 bits (121), Expect = 7.598e-7 Identity = 57/202 (28.22%), Postives = 94/202 (46.53%), Query Frame = 2
Query: 1328 IPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSL--------------------SGLRR---LDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLR-SRIV 1861
I ++ + L N + P + Q + L+ LD+ NN+ +ELP + L LRR LD+S N++ LP + + L+ LS N++ IP+ + + LQTL + L + I L LE L ++ N + ++PP LG K++ LN+D N F P+ + TA + LR +R+V
Sbjct: 140 ISLRILELRENHLRVLPKSMSQLKN-LERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLS-NNLLIEIPEQIGALGKLQTLKLEENHLGELP-NSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNIDEN-FLESIPSELGSCTAMTILSLRDNRLV 337 HSP 8 Score: 51.2174 bits (121), Expect = 9.205e-7 Identity = 55/205 (26.83%), Postives = 93/205 (45.37%), Query Frame = 2
Query: 1262 IVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIG----------------------NTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAI 1810
+++L NL +S ++ S ++ + L+ N+ P +F + LQ L LS+N+++ LP+ +S+L LR LD S N I +PE++ L S N IG + +P R+ L+ L + L ++ + + L NLE L+I NN + +P +G + L +D N K RP I
Sbjct: 3 VLELRHSNLTTVSHDLFKSKEGKALEEVYLDANQLRDLPRGLFNLQN-LQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLP-KSMSQLKNLERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKELRPEI 205
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Match: lrrc40 (leucine rich repeat containing 40 [Source:NCBI gene;Acc:101158008]) HSP 1 Score: 306.99 bits (785), Expect = 2.151e-95 Identity = 204/583 (34.99%), Postives = 339/583 (58.15%), Query Frame = 2
Query: 134 NLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEE-----PKSFG-PGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRI 1858
LLK A+KSG LNL+ R ++++P SVY++N ++++SF SD WW+ LTKL+L++N IS IS+DI LL L LD+ DN +++L +I L +L+ ++ N++ LP ++ L++L+ N L++LP+ L NLT +DLS N +++ P + L L K+ LS+N+++ +P L +L N+++LD S N+L + Q+ L NRL + P L LKE+ + +N + + + L + I L + +NKI +PE++S+L +L+ LDL+NND+ +LP SL + LK L ++GNP R ++R ++ G + + +YLR R +E E P + P +N +IK G +DQ+D++ I DE + V N + NK + P ++ Q S SL +L+L NQ+ + L L LD+ N+++ LP + ++ L ILSYN + P+V+ +M ++T++M++ ++ +D ++ L +L L++SNN + +IPPELGLC ++SL+L GN F+ PR AI++KGT +V+EYLRSRI
Sbjct: 29 GLLKAARKSGQLNLSGRALTKVPQSVYRVNE---EAQQNVSFGASDR-WWEQTDLTKLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSLPVEVCMLRNLRSLTLQQNLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISLSHNKLSCLPDCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLP-QLHAPALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLPASLSLLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKEEPESSEDPPTAMTFPSQARINVHSIK-TLGVLDQSDMQVDSI-----------PDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLTELNLGFNQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADMENLAKLRCIILSYNRF-KSFPEVLYQMFSMETVLMANNQVSSVDPARLARLEHLSTLDLSNNDLLSIPPELGLCTSLRSLSLQGNPFRTPRAAIVAKGTDAVLEYLRSRI 593
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:101159973]) HSP 1 Score: 121.709 bits (304), Expect = 1.335e-28 Identity = 143/509 (28.09%), Postives = 248/509 (48.72%), Query Frame = 2
Query: 371 HLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIPVK--------GINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDY--EKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPA-IISKGTASVMEYLR 1849
LD+S +I LP SI L QL + NK+Q LP ++ L TL+ S N+L SLP L+ L L ++DL HN++ E P + L LT L L +N+IT++ + L L +L + +NK++ Q+ + L NL + + HN + + K+ + I L + +N++ D+PE I L S++ L L N + A+P SL +L+ L+++ N +L +++S + L RN + P GP Q ++ + I++ RA + KL+ ++ N L S+P+ +NL N+ + P + SL+ L LSNN + +LP+ I +L LR LD+ NK+ LP ++ + L +L+ N + T+P + + L L + G ++ + E+I L NLE L +++N + P EL LC K+ ++++ NC PA I++ G + ++++L+
Sbjct: 104 RLDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIK-----------QLPAEIGELC---------NLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTL-ARNCFQSYPVG-GPS-QFSTIYSLNMEHNHINKIPFGIFSRAKVLSKLNMKD---------NQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVCGLV-SLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNNQL-TTLPRGIGHLTNLTHLGL---GENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLAIMSIE-NCPLTHLPAQIVAGGPSFIIQFLK 573 HSP 2 Score: 115.546 bits (288), Expect = 1.525e-26 Identity = 133/517 (25.73%), Postives = 237/517 (45.84%), Query Frame = 2
Query: 158 SGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCL--------SIDGNPFRMLKRSIINSGADSIKRYLRMRNTQ-EEEPKSFG--PGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSL-HSI----PVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLT 1651
S L+L+ R+I +P S+ ++N L +L L +N + + ++ L L L +S+N+++SLPDS+ +L +L+ ++ NK++++P + L TL +N + ++ K + LS LT++ + N+I + P +I EL L LD+++NQ+ +P + + LDL N+L E G A ++++ L NRL+ P L + L+E++L +N IS + + LS + N+ +LT+A N P +G Q + I+ PF + R+ + S L M++ Q P FG + LN AT + + + G+V L + LS+ +L L H I ++ ++L NK P +I D LQ L L+NNQ++ LP I L+ L L + N ++ LPE + + L L+ N +++P ++ + L + + +C LT
Sbjct: 102 SMRLDLSKRSIHMLPTSIKELNQ-----------------------LAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYP-------------------------VGGPSQFSTIYSLNMEHNHINKIPFGIFSRAKVLS-------KLNMKDNQLTSLPLDFGTWTSMVELNLATNQ-----LAKIPEDVCGLVSLE---VLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKD-LQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLAIMSIENCPLT 554
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Match: mfhas1 (malignant fibrous histiocytoma amplified sequence 1 [Source:NCBI gene;Acc:101173528]) HSP 1 Score: 115.161 bits (287), Expect = 4.712e-26 Identity = 88/266 (33.08%), Postives = 145/266 (54.51%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFC--APVHQIWLHVNRLTKFPIVLPN----KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGN 1075
L L L N + + + L +L LD+S N + +L + + L LK ++ NKIQ LP QI L+ L S+N L LP+ + L+ L +D HN++S+FP +I L L +LDLS N+ ++P + RL ++++L LS ++ + E FC + + L NRL+ P P+ + LK ++L+ N + ++ L + + L ++ N+++ +PEEIS L L NL L NN + LP S+ D+E L+ L + GN
Sbjct: 87 LRVLELRRNKFTAAPRVLCELGQLVELDMSHNCLRTLSEGLGQLRALKKLCVSHNKIQSLPAQIGALQALEELDISFNLLHGLPRSFSSLTRLRALDADHNQLSQFPVEILALGQLEELDLSGNRFVALPANIWRLTSIKVLWLSSLRMASLPETFCRLQNLESLMLDGNRLSALP---PSFGLLQRLKMMNLSSNQL-QVFPQALLGVCGLEELYLSRNRLSHVPEEISQLGRLVNLWLDNNSITRLPDSIVDLENLEELVLQGN 348 HSP 2 Score: 79.337 bits (194), Expect = 7.480e-15 Identity = 100/388 (25.77%), Postives = 165/388 (42.53%), Query Frame = 2
Query: 383 SDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYL-ELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDS-GFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMS 1540
+ N LP+ I+ + L N+ N +Q+LP+++ + L +L+ L N + P+ L L L +D+SHN + + +L L KL +S+N+I S+P + L L+ LD+S N L F + LT+ L+ + HN +S+ + L+ + + L ++ N+ +P I LTS+ L LS+ M +LP + ++ L+ L +DGN L P SFG LQ L + + Q L G+ +L L+ N+ S P +I Q L +L L NN I+ LP++I L L L + N I VLP++ ++S
Sbjct: 49 AQNQQLVLPEDISEVEAL---NLGNNSLQELPEELGSSLNKLRVLELRRNKFTAAPRVLCELGQLVELDMSHNCLRTLSEGLGQLRALKKLCVSHNKIQSLPAQIGALQALEELDISFNLLHGLPRSFSS-----------LTR---------LRALDADHNQLSQFPVEILA-LGQLEELDLSGNRFVALPANIWRLTSIKVLWLSSLRMASLPETFCRLQNLESLMLDGNRLSAL-------------------------PPSFGL-LQRLKMMNLSSNQLQVFPQALLGVCGLEELY------------------------LSRNRLSHVPEEISQLG-RLVNLWLDNNSITRLPDSIVDLENLEELVLQGNHIAVLPDNFGKLS 361 HSP 3 Score: 63.5438 bits (153), Expect = 5.994e-10 Identity = 85/331 (25.68%), Postives = 149/331 (45.02%), Query Frame = 2
Query: 659 SYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIW---LHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEI--LNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVM 1633
+ NQ +P E + ++ L+L N LQ E + ++++ L N+ T P VL L E+ ++HN + +++ L ++ + L +++NKI +P +I L +L LD+S N + LP S + +L+ L D N I+ G Q EE G AL + L + ++ LS +A L + L +L S+ L+GN+ S P F L+ ++LS+NQ+ P + + GL L +S N++ +PE +S++ L + L N I +PD + + L+ LV+
Sbjct: 49 AQNQQLVLP---EDISEVEALNLGNNSLQELPEELGSSLNKLRVLELRRNKFTAAPRVLCELGQLVELDMSHNCLRTLSEG-LGQLRALKKLCVSHNKIQSLPAQIGALQALEELDISFNLLHGLPRSFSSLTRLRALDADHNQLSQFPVEILALG-------------QLEELDLSGNRFVALPANIWR----------LTSIKVLWLSSLRMASLPETFCRLQNLESL-----MLDGNRLSALP-PSFGLLQRLKMMNLSSNQLQVFPQALLGVCGLEELYLSRNRLSHVPEEISQLGRLVNLWLDNNSI-TRLPDSIVDLENLEELVL 345 HSP 4 Score: 54.6842 bits (130), Expect = 3.113e-7 Identity = 61/235 (25.96%), Postives = 102/235 (43.40%), Query Frame = 2
Query: 1283 NLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSD----------------------SLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDI-------------------GN---TIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSR 1855
+L +L +E+ +SL+ + V + L NKF+ P + + +L+ L +S+N+I LP I +L L LDISFN + LP S S ++ L +N + GN +P + R+ ++ L +S + + E L NLE L + N +S +PP GL +++K +NL N +V A++ G + E SR
Sbjct: 72 SLQELPEELGSSLNKLRV--LELRRNKFTAAPRVLCELGQLVELDMSHNCLRTLSEGLGQLRALKKLCVSHNKIQSLPAQIGALQALEELDISFNLLHGLPRSFSSLTRLRALDADHNQLSQFPVEILALGQLEELDLSGNRFVALPANIWRLTSIKVLWLSSLRMASLP-ETFCRLQNLESLMLDGNRLSALPPSFGLLQRLKMMNLSSNQLQVFPQALL--GVCGLEELYLSR 301
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Match: shoc2 (SHOC2 leucine rich repeat scaffold protein [Source:NCBI gene;Acc:101159973]) HSP 1 Score: 100.138 bits (248), Expect = 9.248e-22 Identity = 88/345 (25.51%), Postives = 168/345 (48.70%), Query Frame = 2
Query: 158 SGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLER------------------------LHNLQILDLSQNKLQTFSEGFCAPVHQIWL------HVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSI 1102
S L+L+ R+I +P S+ ++N L +L L +N + + ++ L L L +S+N+++SLPDS+ +L +L+ ++ NK++++P + L TL +N + ++ K + LS LT++ + N+I + P +I L + +L L YN+++++P +L + L NL L L++N Q++ G + I+ H+N++ F I K L ++++ N ++ + D ++ L +A N++A IPE++ L SL L LSNN +K LP +G++ +L+ L ++ N L I
Sbjct: 102 SMRLDLSKRSIHMLPTSIKELNQ-----------------------LAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNHINKIP-FGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLAKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEI 421 HSP 2 Score: 89.7373 bits (221), Expect = 2.054e-18 Identity = 128/462 (27.71%), Postives = 222/462 (48.05%), Query Frame = 2
Query: 512 LSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDL----RATGIVKLSFRNLADLSDEILNSLHSIPVK--------GINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDY--EKIKMLSNLEVLXXXXXXXXXXPP-ELGLCEKIKSLNLDGNCFKVPRPA-IISKGTASVMEYLR 1849
L S ++ LP + L+ L + L N++ P ++ L L L LS N +TS+P +L+ L L++LDL NKL+ +I V RLT +L + L N I+ + KD + + + L+I NKI +P EI L S++ L L N + A+P SL +L+ L+++ N +L +++S + L RN + P GP Q ++ + I++ RA + KL+ ++ N L S+P+ +NL N+ + P + SL+ L LSNN + +LP+ I +L LR LD+ NK+ LP ++ + L +L+ N + T+P + + L L + G ++ + E+I L NLE L +++N + P EL LC K+ ++++ NC PA I++ G + ++++L+
Sbjct: 105 LDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLR-----------EIPAVVYRLT---------SLTTLYLRFNRITTVEKD-IRNLSKLTMLSIRENKIKQLPAEIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTL-ARNCFQSYPVG-GPS-QFSTIYSLNMEHNHINKIPFGIFSRAKVLSKLNMKD---------NQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVCGLV-SLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNNQL-TTLPRGIGHLTNLTHLGL---GENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLAIMSIE-NCPLTHLPAQIVAGGPSFIIQFLK 527 HSP 3 Score: 75.0998 bits (183), Expect = 1.061e-13 Identity = 50/147 (34.01%), Postives = 79/147 (53.74%), Query Frame = 2
Query: 365 LSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVN 799
LS L++ DN ++SLP T + N+ N++ K+P+ + + L+ L S N LK LP G+ L L +DL N++ P +I L L KL L+ NQ+T++P + L NL L L +N LQ E G + +++L+ N
Sbjct: 335 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDN 481
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Match: lrrc7 (leucine rich repeat containing 7 [Source:NCBI gene;Acc:101170832]) HSP 1 Score: 100.908 bits (250), Expect = 1.901e-21 Identity = 90/298 (30.20%), Postives = 144/298 (48.32%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLT-----------------------IMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIW---LHVNRLTKFPI-VLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIIN 1108
L +L L AN I + K + L L + DN++S+LP +I +L LK +I+KN IQ+ PD I+ L + S N + LP G L NLT I++L N + P I+ L L +LDL N+ + +P LE++HNL+ L L N LQT G + Q+ L NR+ V + L+++ L+ NM+ + D + + + TL + +N++ +P I L+ L D S N++++LP ++G + L+ + D N L R I N
Sbjct: 61 LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIP-GSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLP-DSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGN 356 HSP 2 Score: 87.0409 bits (214), Expect = 3.444e-17 Identity = 65/217 (29.95%), Postives = 113/217 (52.07%), Query Frame = 2
Query: 89 IDIGNSESQNNKAFENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNK 739
+D+G++E +L+Q L L N ++ IP S+ K+ D E DS L L+L++N + + I +L KL+ L + DN ++SLP +I +L+ L+ F+ + N+++ LP I L+T + N L LP+ + N+T+M L N++ P +I ++ L L+LS N++ ++PFT +L +L L LS N+
Sbjct: 202 LDLGSNEF---SEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQ 415 HSP 3 Score: 70.8626 bits (172), Expect = 3.327e-12 Identity = 55/179 (30.73%), Postives = 82/179 (45.81%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSE--GFCAPVHQIWLHVNRLTKFPIVL 826
L +L L NS+ I I L +L +LD++ N I +L ++ L+ ++ N +Q LPD I +L TL N L SLP + LS L D S NE+ PP I L+ L N +T +P + N+ ++ L NKL+ + G + + L NRL P
Sbjct: 222 LKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTF 400 HSP 4 Score: 56.225 bits (134), Expect = 1.210e-7 Identity = 94/403 (23.33%), Postives = 183/403 (45.41%), Query Frame = 2
Query: 626 NELYLLTKLDLSYNQITSMP---FTLERLHNLQILDLSQNKLQTFSEGF--CAPVHQIWLHVNRLTKFPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFK 1792
E +++ LD S+ + +P F+ ER L+ L L N+++ + C + ++ + N L+ P + + NLKE+ ++ N I E D++ + + + N I +P+ + L +L+ L L++ ++ LP + G + +L+ L + N + + +SI R TQ L+ L+ + + V NL +L + NSL +IP ++ ++L N+ + ++L+DL LS+N + LP++I L L L + N++ LP ++ +S L F S N++ ++P + ++ L+T LT + E I N+ V+++ +N + +P E+G K++ LNL N K
Sbjct: 32 GEEEVISVLDYSHCSLQQVPKEIFSFER--TLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFP-DNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSI-------------HRLTQ----------LERLD----------LGSNEFSEVPEVLEQIHNLKELWLDN-NSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDV-SGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNEL-ESLPPTIGYLHSLRTFAADENFLTELPRE-IGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLK 394
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Match: SMESG000063073.1 (SMESG000063073.1) HSP 1 Score: 1171.76 bits (3030), Expect = 0.000e+0 Identity = 611/615 (99.35%), Postives = 612/615 (99.51%), Query Frame = 2
Query: 23 MSKFREFRSKNKLNPSNDNSLFIDIGNSESQNNKAFENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVTN 1867
MSKFREFRSKNKLNPSNDNSLFIDIGN+ESQNNKAFENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLN LSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKL TFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTSLSNLDLSNNDMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRA IKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLNISNNAISNIPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVTN
Sbjct: 1 MSKFREFRSKNKLNPSNDNSLFIDIGNTESQNNKAFENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDSSWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNRLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLLTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTSLSNLDLSNNDMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRAAIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLNISNNAISNIPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVTN 615
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Match: SMESG000004186.1 (SMESG000004186.1) HSP 1 Score: 347.821 bits (891), Expect = 7.137e-111 Identity = 224/590 (37.97%), Postives = 345/590 (58.47%), Query Frame = 2
Query: 131 ENLLKQAKKSGSLNLANRNISEIPNSVYKINMPNVNDEKSISFEQSDS----SWWDDVFLTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSG------FIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEM-SCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRIVTN 1867
+N++ A+K+G+L L N EIP +Y IN P D++ I +E DS SWW+DV LTKL L++N I +S+DI L L +LD+ +NN+ ++PD I +L QL+Y N++KNKI LP+ I LQ + N LK LP L +L ++DLS+NE S P I L +L +SYN++ +P + +L L D+SQNK+ F + A + +++N +T FP+ +LKE+ + +N I+ ++ H+S IPNI LTI+ N + ++P EI L L LD+S N++ ++P +LG+M+ L+ L +DGNPFR + R+ I SG + +KRYLR R+ E+ SF P L L +I+ ++G ID +L +TG + LS RN+ + + +K +NL NK FP+ I + S+ LDLS N++ EL + + L+ L+++ N +R LPES + M + L+ +++N +G +P+V+ + L+ L S+C + II+ + L L L++SNN I IPPE GLCE IK NLDGN + P +S GT V EYLRS+I +N
Sbjct: 42 KNIIDDARKTGTLTLINFGFDEIPTDIYNINRP---DKRRIGYEGFDSEDRNSWWEDVLLTKLDLSSNHIKKVSEDIRFLSNLLYLDLQNNNLKTIPDEICDLAQLRYLNLSKNKITVLPESIGTLNHLQQIILGNNLLKLLPTEFCRLLSLEVLDLSNNEFSHIPDAIGNFIKLKRLSISYNKLEKLPKNICKLKALIYFDVSQNKISEFPKDLDASFEVLKVNINMITLFPVSRLTPSLKELHIDNNQITTLSSLHISYIPNINILTISKNNVIELPNEIIDLKYLVQLDVSFNNLHSIPYALGNMDTLQVLCVDGNPFRSINRTAITSGTEILKRYLRTRSNM-EDITSF-PSLAPLPINSIESEAGNDISVLHIDAHELNSTGSLDLSNRNITSIPENYFELFKFKKIKVVNLGHNKLVEFPIGILSCAFSIVTLDLSFNRLLELSDVFNHFVSLKALNLNGNYLRTLPESFTTMKNTLNTLEVAHNPLGLELPEVIFNLVNLKYLNASYCAIVIINPKNFMRLKLLTELDLSNNEIEIIPPEFGLCEHIKIANLDGNKIRHPALTSVSHGTEVVFEYLRSQIQSN 626
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Match: SMESG000013154.1 (SMESG000013154.1) HSP 1 Score: 105.145 bits (261), Expect = 2.336e-23 Identity = 111/413 (26.88%), Postives = 188/413 (45.52%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSE 1534
+ + L AN I + K+ L KL L +SDN ++ +P+SI N L ++++N I + I+ EL++L S N + LP+G + L NL +++L+ N ++E P L LL KL+L N + ++P + + +L+ILDL N+ Q F + +L+ L+E+SL +N + + ++ L + N+ L ++ N + I EEI L L++ LS N + +LP ++G++++L L +D N L I ++ N + P S G R + +V L+ N+L+SIP + N L I F D N I LP+ I ++ L LDIS N+I LP S+++
Sbjct: 39 IEECFLDANQIKDLPKNFFKLSKLRVLTLSDNELTYIPESIGNFNHLVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPEGFSSLRNLIVLNLNDNSLTELPNDFGNLSLLQKLELRDNCLKTLPNSFSKFVHLEILDLGGNEFQEFPKSLA-----------KLSA---------LRELSLDNNELQNLPQE-LGTLKNLQQLDVSENFLEVICEEIGNLEQLTDFALSQNSLDSLPNNIGNLKELTILKVDQNKLMSLTTHI--GSCSKLQELYLTENLLTKLPGSLG-----------------------RLSKLVHLNVDR---------NNLNSIPPELSKCN-------ELSIMSFRD---------NHIRRLPDEIGNMKKLHVLDISINQIDRLPLSIAQ 380 HSP 2 Score: 66.6254 bits (161), Expect = 3.063e-11 Identity = 87/345 (25.22%), Postives = 160/345 (46.38%), Query Frame = 2
Query: 833 KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMR---NTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRI 1858
++++E L N I ++ K+ K+ + LT+++N++ IPE I L LD+S N + ++ ++ +L+ L + NP L G S++ + + N+ E P FG L L + ++D+ + SF L EIL+ L GN+F FP + + S +L++L L NN++ LP + +L L++LD+S N + V+ E + + L+ F LS N + +++P+ + + L L + L + I S L+ L ++ N ++ +P LG K+ LN+D N P + S+M + + I
Sbjct: 37 RSIEECFLDANQIKDLPKNFF-KLSKLRVLTLSDNELTYIPESIGNFNHLVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPE-----GFSSLRNLIVLNLNDNSLTELPNDFG-NLSLLQKLELRDN----------CLKTLPNSFSKFVHL--EILD-----------LGGNEFQEFPKSLAKLS-ALRELSLDNNELQNLPQELGTLKNLQQLDVSENFLEVICEEIGNLEQLTDFALSQNSL-DSLPNNIGNLKELTILKVDQNKLMSLTTH-IGSCSKLQELYLTENLLTKLPGSLGRLSKLVHLNVDRNNLNSIPPELSKCNELSIMSFRDNHI 348
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Match: SMESG000013154.1 (SMESG000013154.1) HSP 1 Score: 104.76 bits (260), Expect = 2.477e-23 Identity = 111/413 (26.88%), Postives = 188/413 (45.52%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPIVLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSE 1534
+ + L AN I + K+ L KL L +SDN ++ +P+SI N L ++++N I + I+ EL++L S N + LP+G + L NL +++L+ N ++E P L LL KL+L N + ++P + + +L+ILDL N+ Q F + +L+ L+E+SL +N + + ++ L + N+ L ++ N + I EEI L L++ LS N + +LP ++G++++L L +D N L I ++ N + P S G R + +V L+ N+L+SIP + N L I F D N I LP+ I ++ L LDIS N+I LP S+++
Sbjct: 39 IEECFLDANQIKDLPKNFFKLSKLRVLTLSDNELTYIPESIGNFNHLVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPEGFSSLRNLIVLNLNDNSLTELPNDFGNLSLLQKLELRDNCLKTLPNSFSKFVHLEILDLGGNEFQEFPKSLA-----------KLSA---------LRELSLDNNELQNLPQE-LGTLKNLQQLDVSENFLEVICEEIGNLEQLTDFALSQNSLDSLPNNIGNLKELTILKVDQNKLMSLTTHI--GSCSKLQELYLTENLLTKLPGSLG-----------------------RLSKLVHLNVDR---------NNLNSIPPELSKCN-------ELSIMSFRD---------NHIRRLPDEIGNMKKLHVLDISINQIDRLPLSIAQ 380 HSP 2 Score: 66.6254 bits (161), Expect = 3.405e-11 Identity = 87/345 (25.22%), Postives = 160/345 (46.38%), Query Frame = 2
Query: 833 KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMR---NTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFKVPRPAIISKGTASVMEYLRSRI 1858
++++E L N I ++ K+ K+ + LT+++N++ IPE I L LD+S N + ++ ++ +L+ L + NP L G S++ + + N+ E P FG L L + ++D+ + SF L EIL+ L GN+F FP + + S +L++L L NN++ LP + +L L++LD+S N + V+ E + + L+ F LS N + +++P+ + + L L + L + I S L+ L ++ N ++ +P LG K+ LN+D N P + S+M + + I
Sbjct: 37 RSIEECFLDANQIKDLPKNFF-KLSKLRVLTLSDNELTYIPESIGNFNHLVELDVSRNHIDSVHYNIKFCNELRSLDLSNNPINRLPE-----GFSSLRNLIVLNLNDNSLTELPNDFG-NLSLLQKLELRDN----------CLKTLPNSFSKFVHL--EILD-----------LGGNEFQEFPKSLAKLS-ALRELSLDNNELQNLPQELGTLKNLQQLDVSENFLEVICEEIGNLEQLTDFALSQNSL-DSLPNNIGNLKELTILKVDQNKLMSLTTH-IGSCSKLQELYLTENLLTKLPGSLGRLSKLVHLNVDRNNLNSIPPELSKCNELSIMSFRDNHI 348
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Match: SMESG000016748.1 (SMESG000016748.1) HSP 1 Score: 103.99 bits (258), Expect = 7.722e-23 Identity = 109/418 (26.08%), Postives = 206/418 (49.28%), Query Frame = 2
Query: 311 LTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHVNRLTKFPI-VLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRM-RNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRN--LADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSH 1552
L+ N IS +S +I L KL H ++ N + ++ ++ L+ +++ NK++ +P +I N L+ +CS+N LK+LP + L L M+LSHN+I + P +I L L ++ N+I +P ++ + +L+ ++ S N++ + + + L N+ P + +K +SL N + I + L K+ N+ L ++ N I IP E+ T L + ++ N++ P SL + CL+I G + + N D ++ LR+ N E P F ++ I + +V+L F + L + I + H ++ +NL+ N IFP + S L +L++S+N+ISE+ ++IS ++ L LD+SFN++ P ++ ++ L +
Sbjct: 59 LSKNKISDLSDEIIALSKLRHFFVNGNMLRTINVNLFYARGLQSLDVSNNKLEVIPVEIANLGHLEYFNCSHNKLKALPLTIFGLLKLQYMNLSHNQIQDIPEEIGNLKSLQTFLINSNEIVLIPSSISTITSLKTIEASNNQMCHLPISWVGSLKTLKLDGNQFQFIPSQIYDCCEMKYLSLAKNYLKFIPIE-LVKLRNLRQLDLSFNSIEYIPCEMGYWTKLVDFNIHGNNITYFPQSLIANHKFVCLNISGCQLKEFPLLLCNC-YDLME--LRVGENELNELPDKFQLFCNMKYLFMNNNNFELIPLQVCLLSTLVELDFSHNFLWQVPPGIFSLKH---LRKLNLSFNNILIFPGCTAELS-YLSELNVSHNKISEICDSISWMTFLYYLDLSFNELSTFPSAIFQLRYLKY 468 HSP 2 Score: 93.9745 bits (232), Expect = 1.109e-19 Identity = 119/439 (27.11%), Postives = 204/439 (46.47%), Query Frame = 2
Query: 467 QKLPDQIENYLELQTLSCSYNTLKSL---PKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHV--NRLTKFPI-VLPNKNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSI----KRYLR--------MRNTQ---------EEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFR------------NLADLSDEIL--NSLHSIP--------VKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMS 1636
QK E E Q L C +++L PK + ++ +++LS N+IS+ +I L L ++ N + ++ L LQ LD+S NKL+ H + + N+L P+ + L+ ++L+HN I +I ++ + + ++ T I +N+I IP IS +TSL ++ SNN M LP+S + LK L +DGN F+ + I + K YL+ +RN + E P G + ++ ++ + Q+ + V L+ N DL + + N L+ +P +K + +N N F + PL++ S +L +LD S+N + ++P I SL LR+L++SFN I + P +E+S LS +S+N I I D +S M +L L +S
Sbjct: 16 QKFHPSGEGLFEYQELKCFVYVMQNLYDVPKEIYFHPDVELINLSKNKISDLSDEIIALSKLRHFFVNGNMLRTINVNLFYARGLQSLDVSNNKLEVIPVEIANLGHLEYFNCSHNKLKALPLTIFGLLKLQYMNLSHNQIQDIPEE-IGNLKSLQTFLINSNEIVLIPSSISTITSLKTIEASNNQMCHLPISW--VGSLKTLKLDGNQFQFIPSQIYDCCEMKYLSLAKNYLKFIPIELVKLRNLRQLDLSFNSIEYIPCEMGYWTKLVDFNIHGNNITYFPQSLIANHKFVCLNISGCQLKEFPLLLCNCYDLMELRVGENELNELPDKFQLFCNMKYLFMNNNNFELIPLQVCLLS-TLVELDFSHNFLWQVPPGIFSLKHLRKLNLSFNNILIFPGCTAELSYLSELNVSHNKISE-ICDSISWMTFLYYLDLS 449 HSP 3 Score: 79.7221 bits (195), Expect = 3.556e-15 Identity = 115/463 (24.84%), Postives = 206/463 (44.49%), Query Frame = 2
Query: 296 LTKLILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCAPVHQIWLHV--NRLTKFP-----------IVLPNKN-------------LKEISLTHNMISEI-----TKDHLSKIP----NI-----CT--------LTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSIINSGADSIKRYLRMRNTQEEEPKSFGPGLQALNRATIKDDSGFIDQTDLRATGIVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMS 1540
L ++ +N I I IS + L ++ S+N + LP I+ + LK ++ N+ Q +P QI + E++ LS + N LK +P L L NL +DLS N I P ++ L ++ N IT P +L H L++S +L+ F C + L V N L + P + + N N L E+ +HN + ++ + HL K+ NI CT L +++NKI++I + IS +T L LDLS N++ P ++ + LK + L +++++ + + K++ +R K ++ +I+ DQ + + + +NL L++ +NL+ N+F P I + ++L+ L+++NN + ELP +S L +D+ N++ LP SL+ +S
Sbjct: 169 LQTFLINSNEIVLIPSSISTITSLKTIEASNNQMCHLP--ISWVGSLKTLKLDGNQFQFIPSQIYDCCEMKYLSLAKNYLKFIPIELVKLRNLRQLDLSFNSIEYIPCEMGYWTKLVDFNIHGNNITYFPQSLIANHKFVCLNISGCQLKEFPLLLCNCYDLMELRVGENELNELPDKFQLFCNMKYLFMNNNNFELIPLQVCLLSTLVELDFSHNFLWQVPPGIFSLKHLRKLNLSFNNILIFPGCTAELSYLSELNVSHNKISEICDSISWMTFLYYLDLSFNELSTFPSAIFQLRYLK--------YLNLSNNLLDNFSKTDKKWEELRTIDFSNNKFTEFPVELCVHDSIR--KLVFDQKEGTKIKSLPVEIKNLWRLAE-------------LNLSNNEFLTIPPVIMEL-ENLKVLEMANNILKELPLNLSDAKNLENIDVRNNQLTELPFSLTTLS 605 HSP 4 Score: 65.855 bits (159), Expect = 8.020e-11 Identity = 80/293 (27.30%), Postives = 136/293 (46.42%), Query Frame = 2
Query: 305 LILTANSISFISKDISLLDKLSHLDISDNNISSLPDSITNLTQLKYFNINKNKIQKLPDQIENYLELQTLSCSYNTLKSLPKGLNCLSNLTIMDLSHNEISEFPPQINELYLLTKLDLSYNQITSMPFTLERLHNLQILDLSQNKLQTFSEGFCA--PVHQIWLHVNRLTK---FPIVLPN-KNLKEISLTHNMISEITKDHLSKIPNICTLTIANNKIADIPEEISILTXXXXXXXXXXXMKALPLSLGDMEQLKCLSIDGNPFRMLKRSI-INSGADSIKRYLRMRNTQEE 1162
L + N+ I + LL L LD S N + +P I +L L+ N++ N I P L L+ S+N + + ++ ++ L +DLS NE+S FP I +L L L+LS N + + T ++ L+ +D S NK F C + ++ TK P+ + N L E++L++N I + ++ N+ L +ANN + ++P +S +L N+D+ NN + LP SL + DG+P + I +SI+ +LR E+
Sbjct: 354 LFMNNNNFELIPLQVCLLSTLVELDFSHNFLWQVPPGIFSLKHLRKLNLSFNNILIFPGCTAELSYLSELNVSHNKISEICDSISWMTFLYYLDLSFNELSTFPSAIFQLRYLKYLNLSNNLLDNFSKTDKKWEELRTIDFSNNKFTEFPVELCVHDSIRKLVFDQKEGTKIKSLPVEIKNLWRLAELNLSNNEFLTIPPV-IMELENLKVLEMANNILKELPLNLSDAKNLENIDVRNNQLTELPFSLTTLSNKIKFKFDGSPLVNPPLIVCIGGNMESIQSFLRHNQAFED 645 HSP 5 Score: 60.8474 bits (146), Expect = 2.749e-9 Identity = 53/177 (29.94%), Postives = 101/177 (57.06%), Query Frame = 2
Query: 1262 IVKLSFRNLADLSDEILNSLHSIPVKGINLNGNKFSIFPLKIFQFSDSLQDLDLSNNQISELPNTISSLSGLRRLDISFNKIRVLPESLSEMSCLSHFILSYNDIGNTIPDVVSRMNYLQTLVMSHCGLTIIDYEKIKMLSNLEVLXXXXXXXXXXPPELGLCEKIKSLNLDGNCFK 1792
++ LS ++DLSDEI+ +L + + +NGN + +F ++ LQ LD+SNN++ +P I++L L + S NK++ LP ++ + L + LS+N I + IP+ + + LQT +++ + +I I +++L+ + SNN + ++P + +K+L LDGN F+
Sbjct: 56 LINLSKNKISDLSDEII-ALSKL--RHFFVNGNMLRTINVNLF-YARGLQSLDVSNNKLEVIPVEIANLGHLEYFNCSHNKLKALPLTIFGLLKLQYMNLSHNQIQD-IPEEIGNLKSLQTFLINSNEIVLIP-SSISTITSLKTIEASNNQMCHLP--ISWVGSLKTLKLDGNQFQ 224 The following BLAST results are available for this feature:
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 3
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Leucine-rich repeat-containing protein 40 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000082 ID=SMED30000082|Name=Leucine-rich repeat-containing protein 40|organism=Schmidtea mediterranea sexual|type=transcript|length=2000bpback to top protein sequence of SMED30000082-orf-1 >SMED30000082-orf-1 ID=SMED30000082-orf-1|Name=SMED30000082-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=616bp MSKFREFRSKNKLNPSNDNSLFIDIGNSESQNNKAFENLLKQAKKSGSLNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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