retinoblastoma binding protein-1
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30000072 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 13
Homology
BLAST of retinoblastoma binding protein-1 vs. Ensembl Human
Match: RBBP4 (RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887]) HSP 1 Score: 437.187 bits (1123), Expect = 2.238e-151 Identity = 209/391 (53.45%), Postives = 281/391 (71.87%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. Ensembl Human
Match: RBBP4 (RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887]) HSP 1 Score: 436.802 bits (1122), Expect = 3.382e-151 Identity = 209/391 (53.45%), Postives = 281/391 (71.87%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 405
BLAST of retinoblastoma binding protein-1 vs. Ensembl Human
Match: RBBP4 (RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887]) HSP 1 Score: 435.647 bits (1119), Expect = 4.961e-151 Identity = 208/388 (53.61%), Postives = 279/388 (71.91%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQ 1244
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
BLAST of retinoblastoma binding protein-1 vs. Ensembl Human
Match: RBBP7 (RB binding protein 7, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9890]) HSP 1 Score: 422.935 bits (1086), Expect = 8.817e-146 Identity = 200/391 (51.15%), Postives = 278/391 (71.10%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+P++T+ E KDY+ +++GT +EQ++L++A V +PN+ F++ H D++K EFGG+G VT + IKINH+G +NRARY+PQ P++IATK+ + +V +FDYT+HP+KPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D T+ LWDIN P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+ WS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPK---EGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
BLAST of retinoblastoma binding protein-1 vs. Ensembl Human
Match: RBBP7 (RB binding protein 7, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9890]) HSP 1 Score: 422.165 bits (1084), Expect = 6.470e-145 Identity = 200/391 (51.15%), Postives = 278/391 (71.10%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+P++T+ E KDY+ +++GT +EQ++L++A V +PN+ F++ H D++K EFGG+G VT + IKINH+G +NRARY+PQ P++IATK+ + +V +FDYT+HP+KPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D T+ LWDIN P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+ WS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 62 EEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPK---EGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 449
BLAST of retinoblastoma binding protein-1 vs. Ensembl Celegans
Match: lin-53 (Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]) HSP 1 Score: 395.201 bits (1014), Expect = 2.056e-135 Identity = 192/384 (50.00%), Postives = 260/384 (67.71%), Query Frame = 3
Query: 105 DYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQ 1244
+Y WKKNTPFLYDLVMTH L WPSL+VQW+PD+ + ++ D++ R+I+GT +EQ++LLI+ + +P + F++ YD E+ E+GG+G V + I+INH+G +NRARY+PQ N+IATKS + +VY+FDY +H + P + P + LKGH++EG+GLSWN G++LS++ D T+ WDIN N+N L + + GHE VEDV WH D +FGSVG DK LLIWD R S P + AHS +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H I Q+QWS H ETILAS G+D ++H+WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNILQ+WQ
Sbjct: 17 EYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRLILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVP-RDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINA---NQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQ 395
BLAST of retinoblastoma binding protein-1 vs. Ensembl Celegans
Match: rba-1 (Probable histone-binding protein rba-1 [Source:UniProtKB/Swiss-Prot;Acc:P90917]) HSP 1 Score: 339.347 bits (869), Expect = 1.247e-113 Identity = 174/394 (44.16%), Postives = 251/394 (63.71%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQA-EEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHT-DISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKK------TGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFL 1259
K++ WKKN P+LYD V+T + WPSL+VQWMPD+T+ E+ D S R+I GT Q++L+I+ T+ + F+ +D+E++EFGGYG +A D IKINH G ++RARY+P P +IA++ + +VY+FDYT+HPS+P + K +P L LKGH EG+G+SW+ G LL++ DG I WDIN N+ + S++ GH + EDV +H + +FGSVG D+ L +WD R+SKP + + H+ +V + FNPFSEYILATGS DKT+ LWD+RNM + L+ H I Q+ +S H ET+LAS GSD++V +WD+ K + + ++ E+ FIHAGH +V DF+WN N P + S N LQ+W+ S L
Sbjct: 12 KEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDT-KFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINA---NQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSL 401
BLAST of retinoblastoma binding protein-1 vs. Ensembl Celegans
Match: Y54H5A.1 (pep chromosome:WBcel235:III:5153543:5155465:1 gene:WBGene00021899.1 transcript:Y54H5A.1.3 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y54H5A.1) HSP 1 Score: 85.5001 bits (210), Expect = 8.336e-18 Identity = 92/391 (23.53%), Postives = 157/391 (40.15%), Query Frame = 3
Query: 132 PFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIV-GTQAEEEQDYLLIA-------SVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDI-SIKINHDGCINRARY-LPQCPNVIATKSSNGNVYLFDYT---------RHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVM----AHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNM--GGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENT--YSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYD 1223
P Y L + N WP L+ + D + + IV GTQA++ +D +I ++ E K +S + E ++ + ++ I H G INR R V A S G V +++ T SK + +P G +EG+GL+W+ G L + + I LW + K + + GH+ SVED+ W L S D ++ +WD R + V AH DV + +N E ++ +G +D + +W L+ + G + + H I + W H+ T + G D++ +WD+ + N +L F+H G + V + W+ P + + S D
Sbjct: 61 PSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVSGTQADKPRDNEIIVMGLKNLTTMRKEKENKGDDSDTSEDESEDEDAEEEKKREPKMHAVSIPHYGGINRIRSDRLGDSTVCACWSDQGRVQVWNITDALNYTHGMSGESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQM------KEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEADGQTNIEGVPPQLMFVHMGQ-NEVKEVHWHQQIPGLAINTSID 443
BLAST of retinoblastoma binding protein-1 vs. Ensembl Celegans
Match: Y54H5A.1 (pep chromosome:WBcel235:III:5153464:5155465:1 gene:WBGene00021899.1 transcript:Y54H5A.1.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y54H5A.1) HSP 1 Score: 85.5001 bits (210), Expect = 8.336e-18 Identity = 92/391 (23.53%), Postives = 157/391 (40.15%), Query Frame = 3
Query: 132 PFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIV-GTQAEEEQDYLLIA-------SVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDI-SIKINHDGCINRARY-LPQCPNVIATKSSNGNVYLFDYT---------RHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVM----AHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNM--GGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENT--YSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYD 1223
P Y L + N WP L+ + D + + IV GTQA++ +D +I ++ E K +S + E ++ + ++ I H G INR R V A S G V +++ T SK + +P G +EG+GL+W+ G L + + I LW + K + + GH+ SVED+ W L S D ++ +WD R + V AH DV + +N E ++ +G +D + +W L+ + G + + H I + W H+ T + G D++ +WD+ + N +L F+H G + V + W+ P + + S D
Sbjct: 61 PSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVSGTQADKPRDNEIIVMGLKNLTTMRKEKENKGDDSDTSEDESEDEDAEEEKKREPKMHAVSIPHYGGINRIRSDRLGDSTVCACWSDQGRVQVWNITDALNYTHGMSGESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQM------KEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEADGQTNIEGVPPQLMFVHMGQ-NEVKEVHWHQQIPGLAINTSID 443
BLAST of retinoblastoma binding protein-1 vs. Ensembl Celegans
Match: Y54H5A.1 (pep chromosome:WBcel235:III:5153406:5155436:1 gene:WBGene00021899.1 transcript:Y54H5A.1.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y54H5A.1) HSP 1 Score: 85.5001 bits (210), Expect = 8.336e-18 Identity = 92/391 (23.53%), Postives = 157/391 (40.15%), Query Frame = 3
Query: 132 PFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIV-GTQAEEEQDYLLIA-------SVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDI-SIKINHDGCINRARY-LPQCPNVIATKSSNGNVYLFDYT---------RHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVM----AHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNM--GGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENT--YSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYD 1223
P Y L + N WP L+ + D + + IV GTQA++ +D +I ++ E K +S + E ++ + ++ I H G INR R V A S G V +++ T SK + +P G +EG+GL+W+ G L + + I LW + K + + GH+ SVED+ W L S D ++ +WD R + V AH DV + +N E ++ +G +D + +W L+ + G + + H I + W H+ T + G D++ +WD+ + N +L F+H G + V + W+ P + + S D
Sbjct: 61 PSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVSGTQADKPRDNEIIVMGLKNLTTMRKEKENKGDDSDTSEDESEDEDAEEEKKREPKMHAVSIPHYGGINRIRSDRLGDSTVCACWSDQGRVQVWNITDALNYTHGMSGESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQM------KEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEADGQTNIEGVPPQLMFVHMGQ-NEVKEVHWHQQIPGLAINTSID 443
BLAST of retinoblastoma binding protein-1 vs. Ensembl Fly
Match: Caf1-55 (gene:FBgn0263979 transcript:FBtr0301845) HSP 1 Score: 437.958 bits (1125), Expect = 5.728e-152 Identity = 211/391 (53.96%), Postives = 278/391 (71.10%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+T+ + KDYS R+I+GT +EQ++LLIASV +P+E F+ HYD EK EFGG+G V +I IKINH+G +NRARY+PQ VIATK+ + +V +FDYT+HPSKP+ SG+C+PDL L+GH +EG+GLSWN G LLS++ D TI LWDIN TP+ + +V+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++H+WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 22 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPK---EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 409
BLAST of retinoblastoma binding protein-1 vs. Ensembl Fly
Match: Caf1-55 (gene:FBgn0263979 transcript:FBtr0083052) HSP 1 Score: 437.958 bits (1125), Expect = 6.057e-152 Identity = 211/391 (53.96%), Postives = 278/391 (71.10%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+T+ + KDYS R+I+GT +EQ++LLIASV +P+E F+ HYD EK EFGG+G V +I IKINH+G +NRARY+PQ VIATK+ + +V +FDYT+HPSKP+ SG+C+PDL L+GH +EG+GLSWN G LLS++ D TI LWDIN TP+ + +V+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++H+WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 23 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPK---EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410
BLAST of retinoblastoma binding protein-1 vs. Ensembl Fly
Match: l(2)09851 (gene:FBgn0022288 transcript:FBtr0335269) HSP 1 Score: 113.235 bits (282), Expect = 3.780e-27 Identity = 84/297 (28.28%), Postives = 130/297 (43.77%), Query Frame = 3
Query: 408 INHDGCINRARYLPQCPNVIATK-SSNGNVYLFDYTR--------HPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVM----AHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGS--LKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKE-----------NTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSY 1220
+ H GC+NR R +V A S G V ++D T+ +K + + +P GH QEGF + W+ GVL + I +W TP +KV GH SVED+ W + S VDK + IWD R S ++ AH DV + +N +E +A+G +D + +WDLR + + H I ++WS + T+LASGG D+++ LWDL + N +L FIH G + + W+ P ++ S ++
Sbjct: 157 VKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVW----TPVEDGTWKV--DQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWN-RNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ-KEIKELHWHPQLPGVLLSTAH 445
BLAST of retinoblastoma binding protein-1 vs. Ensembl Fly
Match: l(2)09851 (gene:FBgn0022288 transcript:FBtr0086043) HSP 1 Score: 113.235 bits (282), Expect = 3.780e-27 Identity = 84/297 (28.28%), Postives = 130/297 (43.77%), Query Frame = 3
Query: 408 INHDGCINRARYLPQCPNVIATK-SSNGNVYLFDYTR--------HPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVM----AHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGS--LKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKE-----------NTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSY 1220
+ H GC+NR R +V A S G V ++D T+ +K + + +P GH QEGF + W+ GVL + I +W TP +KV GH SVED+ W + S VDK + IWD R S ++ AH DV + +N +E +A+G +D + +WDLR + + H I ++WS + T+LASGG D+++ LWDL + N +L FIH G + + W+ P ++ S ++
Sbjct: 157 VKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVW----TPVEDGTWKV--DQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWN-RNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ-KEIKELHWHPQLPGVLLSTAH 445
BLAST of retinoblastoma binding protein-1 vs. Ensembl Fly
Match: Pex7 (gene:FBgn0035922 transcript:FBtr0076568) HSP 1 Score: 103.99 bits (258), Expect = 1.776e-24 Identity = 74/280 (26.43%), Postives = 130/280 (46.43%), Query Frame = 3
Query: 417 DGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIK-NAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE--SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQP 1247
DG + A + P ++ AT S +G++ ++ S +Q +P + L+ H E + L W K N LLS + D T++LWD N NS++ ++GH + + LF SV D +L +W+ + KP + + AH+ + + D++ F +L TG D I WDLR M + L E ++ +L S H +LAS D +W+L++ +++E ++A H V WN + +A +D++ ++ P
Sbjct: 71 DGLFDVA-WCPYAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCN----------RQNSITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRGWDLRKMRTHVFELYSGEFAVRRLACSPHSAAVLASANYDFTTRIWNLERGESAQE---------VNARHTEFVCGLDWNPHRTHQLADCGWDSLANVYTP 330
BLAST of retinoblastoma binding protein-1 vs. Ensembl Zebrafish
Match: rbbp4 (retinoblastoma binding protein 4 [Source:NCBI gene;Acc:321726]) HSP 1 Score: 436.802 bits (1122), Expect = 1.711e-151 Identity = 208/391 (53.20%), Postives = 280/391 (71.61%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPK---EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. Ensembl Zebrafish
Match: rbb4l (retinoblastoma binding protein 4, like [Source:NCBI gene;Acc:322129]) HSP 1 Score: 434.491 bits (1116), Expect = 1.345e-150 Identity = 208/391 (53.20%), Postives = 278/391 (71.10%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+PD+ R E KDY R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ +V +FDYT+HPSKPD SG C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPK---EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 405
BLAST of retinoblastoma binding protein-1 vs. Ensembl Zebrafish
Match: rbb4l (retinoblastoma binding protein 4, like [Source:NCBI gene;Acc:322129]) HSP 1 Score: 430.254 bits (1105), Expect = 8.031e-149 Identity = 208/392 (53.06%), Postives = 278/392 (70.92%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKD-EFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+PD+ R E KDY R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ +V +FDYT+HPSKPD SG C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPK---EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. Ensembl Zebrafish
Match: rbb4l (retinoblastoma binding protein 4, like [Source:NCBI gene;Acc:322129]) HSP 1 Score: 430.254 bits (1105), Expect = 8.031e-149 Identity = 208/392 (53.06%), Postives = 278/392 (70.92%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKD-EFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+PD+ R E KDY R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ +V +FDYT+HPSKPD SG C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPK---EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. Ensembl Zebrafish
Match: CR450764.7 (pep chromosome:GRCz11:CHR_ALT_CTG11_3_1:12801933:12802332:1 gene:ENSDARG00000110109.1 transcript:ENSDART00000179997.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR450764.7) HSP 1 Score: 115.931 bits (289), Expect = 3.709e-31 Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEK 353
++Y WKKNTPFLYDLVMTH L WPSLTVQW+PD+ R E KDY R+++GT +EQ++L+IASV +PN+ F++ HYD+EK
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEK 101
BLAST of retinoblastoma binding protein-1 vs. Ensembl Xenopus
Match: rbbp4 (retinoblastoma binding protein 4 [Source:NCBI gene;Acc:496866]) HSP 1 Score: 440.269 bits (1131), Expect = 3.713e-152 Identity = 214/416 (51.44%), Postives = 290/416 (69.71%), Query Frame = 3
Query: 27 SKFLCFTAVKYTMIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
S F+C A + E + N+ +Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR + KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 30 SVFMCAAAFDDAVEERVINE------EYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 436
BLAST of retinoblastoma binding protein-1 vs. Ensembl Xenopus
Match: rbbp4 (retinoblastoma binding protein 4 [Source:NCBI gene;Acc:496866]) HSP 1 Score: 435.261 bits (1118), Expect = 1.291e-150 Identity = 208/391 (53.20%), Postives = 281/391 (71.87%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR + KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 25 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 412
BLAST of retinoblastoma binding protein-1 vs. Ensembl Xenopus
Match: rbbp4 (retinoblastoma binding protein 4 [Source:NCBI gene;Acc:496866]) HSP 1 Score: 434.491 bits (1116), Expect = 1.712e-150 Identity = 211/410 (51.46%), Postives = 286/410 (69.76%), Query Frame = 3
Query: 36 LCFTAVKYTMIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQ 1244
+C A + E + N+ +Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR + KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ
Sbjct: 1 MCAAAFDDAVEERVINE------EYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 401
BLAST of retinoblastoma binding protein-1 vs. Ensembl Xenopus
Match: rbbp7 (retinoblastoma binding protein 7 [Source:NCBI gene;Acc:394900]) HSP 1 Score: 430.254 bits (1105), Expect = 2.006e-148 Identity = 205/406 (50.49%), Postives = 284/406 (69.95%), Query Frame = 3
Query: 57 YTMIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++++ E + + ++Y WKKNTPFLYDLVMTH L WPSLTVQW+PD+TR E KDY+ +++GT +EQ++L++A V +PN+ F++ HYD+EK EFGG+G V+ + IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG C PDL L+GH +EG+GLSWN +G LLS++ D T+ LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+ WS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 FSLVFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPK---EGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 421
BLAST of retinoblastoma binding protein-1 vs. Ensembl Xenopus
Match: rbbp7 (retinoblastoma binding protein 7 [Source:NCBI gene;Acc:394900]) HSP 1 Score: 429.098 bits (1102), Expect = 2.589e-148 Identity = 204/391 (52.17%), Postives = 277/391 (70.84%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+PD+TR E KDY+ +++GT +EQ++L++A V +PN+ F++ HYD+EK EFGG+G V+ + IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG C PDL L+GH +EG+GLSWN +G LLS++ D T+ LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+ WS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPK---EGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
BLAST of retinoblastoma binding protein-1 vs. Ensembl Mouse
Match: Rbbp4 (retinoblastoma binding protein 4, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194912]) HSP 1 Score: 437.187 bits (1123), Expect = 1.537e-151 Identity = 209/391 (53.45%), Postives = 281/391 (71.87%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. Ensembl Mouse
Match: Rbbp7 (retinoblastoma binding protein 7, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194910]) HSP 1 Score: 422.935 bits (1086), Expect = 5.029e-146 Identity = 200/391 (51.15%), Postives = 278/391 (71.10%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+P++T+ E KDY+ +++GT +EQ++L++A V +PN+ F++ H D++K EFGG+G VT + IKINH+G +NRARY+PQ P++IATK+ + +V +FDYT+HP+KPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D T+ LWDIN P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+ WS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPK---EGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
BLAST of retinoblastoma binding protein-1 vs. Ensembl Mouse
Match: Rbbp7 (retinoblastoma binding protein 7, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194910]) HSP 1 Score: 401.364 bits (1030), Expect = 1.140e-137 Identity = 195/391 (49.87%), Postives = 272/391 (69.57%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+P++T+ E KDY+ +++GT +EQ++L++A V +PN+ F++ H D++K GG + IKINH+G +NRARY+PQ P++IATK+ + +V +FDYT+HP+KPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D T+ LWDIN P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+ WS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDK---GGK------IECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPK---EGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 396
BLAST of retinoblastoma binding protein-1 vs. Ensembl Mouse
Match: Rbbp7 (retinoblastoma binding protein 7, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194910]) HSP 1 Score: 374.015 bits (959), Expect = 2.653e-127 Identity = 176/346 (50.87%), Postives = 246/346 (71.10%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEE 1130
++Y WKKNTPFLYDLVMTH L WPSLTVQW+P++T+ E KDY+ +++GT +EQ++L++A V +PN+ F++ H D++K EFGG+G VT + IKINH+G +NRARY+PQ P++IATK+ + +V +FDYT+HP+KPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D T+ LWDIN P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+ WS H ETILAS G+D ++++WDL K G + +E+
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPK---EGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
BLAST of retinoblastoma binding protein-1 vs. Ensembl Mouse
Match: Rbbp7 (retinoblastoma binding protein 7, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194910]) HSP 1 Score: 239.58 bits (610), Expect = 8.120e-77 Identity = 112/218 (51.38%), Postives = 159/218 (72.94%), Query Frame = 3
Query: 18 FVCSKFLCFTAVKYTMIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDIN 671
+ C +L F + T+ E + N+ +Y WKKNTPFLYDLVMTH L WPSLTVQW+P++T+ E KDY+ +++GT +EQ++L++A V +PN+ F++ H D++K EFGG+G VT + IKINH+G +NRARY+PQ P++IATK+ + +V +FDYT+HP+KPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D T+ LWDIN
Sbjct: 27 YGCRSWLVF---EDTVEERVINE------EYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN 235
BLAST of retinoblastoma binding protein-1 vs. UniProt/SwissProt
Match: sp|Q24572|CAF1_DROME (Probable histone-binding protein Caf1 OS=Drosophila melanogaster OX=7227 GN=Caf1 PE=1 SV=1) HSP 1 Score: 437.958 bits (1125), Expect = 6.071e-151 Identity = 211/391 (53.96%), Postives = 278/391 (71.10%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+T+ + KDYS R+I+GT +EQ++LLIASV +P+E F+ HYD EK EFGG+G V +I IKINH+G +NRARY+PQ VIATK+ + +V +FDYT+HPSKP+ SG+C+PDL L+GH +EG+GLSWN G LLS++ D TI LWDIN TP+ + +V+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++H+WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 23 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPK---EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410
BLAST of retinoblastoma binding protein-1 vs. UniProt/SwissProt
Match: sp|Q60972|RBBP4_MOUSE (Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5) HSP 1 Score: 437.187 bits (1123), Expect = 1.075e-150 Identity = 209/391 (53.45%), Postives = 281/391 (71.87%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. UniProt/SwissProt
Match: sp|Q09028|RBBP4_HUMAN (Histone-binding protein RBBP4 OS=Homo sapiens OX=9606 GN=RBBP4 PE=1 SV=3) HSP 1 Score: 437.187 bits (1123), Expect = 1.075e-150 Identity = 209/391 (53.45%), Postives = 281/391 (71.87%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. UniProt/SwissProt
Match: sp|Q3MHL3|RBBP4_BOVIN (Histone-binding protein RBBP4 OS=Bos taurus OX=9913 GN=RBBP4 PE=1 SV=3) HSP 1 Score: 437.187 bits (1123), Expect = 1.075e-150 Identity = 209/391 (53.45%), Postives = 281/391 (71.87%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. UniProt/SwissProt
Match: sp|Q9W7I5|RBBP4_CHICK (Histone-binding protein RBBP4 OS=Gallus gallus OX=9031 GN=RBBP4 PE=1 SV=3) HSP 1 Score: 437.187 bits (1123), Expect = 1.199e-150 Identity = 209/391 (53.45%), Postives = 281/391 (71.87%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KD+S R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. TrEMBL
Match: I1ZIK2 (Retinoblastoma binding protein-1 OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 806.979 bits (2083), Expect = 0.000e+0 Identity = 388/401 (96.76%), Postives = 392/401 (97.76%), Query Frame = 3
Query: 63 MIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL 1265
MIE++SN SNSFCKD IRWKKN FLYD V T+NLTWPSLTVQWMPDIT+LEDKDY QRIIVGTQ EEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL
Sbjct: 1 MIEDISNYSNSFCKDNIRWKKNISFLYDFVKTNNLTWPSLTVQWMPDITKLEDKDYVIQRIIVGTQTEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL 401
BLAST of retinoblastoma binding protein-1 vs. TrEMBL
Match: A0A2P2IAN4 (Histone-binding protein Caf1 OS=Hirondellea gigas OX=1518452 PE=2 SV=1) HSP 1 Score: 447.588 bits (1150), Expect = 2.982e-152 Identity = 216/391 (55.24%), Postives = 279/391 (71.36%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KDYS R+I+GT +EQ++LLIASV +PNE F++ HYD EK EFGG+G V+ +I IKINH+G +NRARY+PQ P VIATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN G LLS++ D TI LWDIN TP+ +V+++ + + GH VEDV WH D LFGSV D+ L+IWD R +KP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++H+WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 28 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDAAHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEN---RVIDARTIFTGHTAVVEDVAWHLLHDSLFGSVADDQKLMIWDTRSNNTNKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEDQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNIMQVWQMAE 415
BLAST of retinoblastoma binding protein-1 vs. TrEMBL
Match: A0A1B6J9A2 (WD_REPEATS_REGION domain-containing protein OS=Homalodisca liturata OX=320908 GN=g.10913 PE=4 SV=1) HSP 1 Score: 447.203 bits (1149), Expect = 4.133e-152 Identity = 215/391 (54.99%), Postives = 279/391 (71.36%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KDYS R+I+GT +EQ++LLIASV +PNE F++ HYD EK EFGG+G V+ +I IKINH+G +NRARY+PQ P VIATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN G LLS++ D TI LWDIN TP+ +++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++H+WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 20 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEN---RIIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 407
BLAST of retinoblastoma binding protein-1 vs. TrEMBL
Match: A0A1B6LW56 (WD_REPEATS_REGION domain-containing protein OS=Graphocephala atropunctata OX=36148 GN=g.8743 PE=4 SV=1) HSP 1 Score: 447.203 bits (1149), Expect = 4.133e-152 Identity = 215/391 (54.99%), Postives = 279/391 (71.36%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KDYS R+I+GT +EQ++LLIASV +PNE F++ HYD EK EFGG+G V+ +I IKINH+G +NRARY+PQ P VIATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN G LLS++ D TI LWDIN TP+ +++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++H+WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 20 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEN---RIIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 407
BLAST of retinoblastoma binding protein-1 vs. TrEMBL
Match: A0A1B6F3K3 (WD_REPEATS_REGION domain-containing protein OS=Cuerna arida OX=1464854 GN=g.21480 PE=4 SV=1) HSP 1 Score: 447.203 bits (1149), Expect = 4.133e-152 Identity = 215/391 (54.99%), Postives = 279/391 (71.36%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KDYS R+I+GT +EQ++LLIASV +PNE F++ HYD EK EFGG+G V+ +I IKINH+G +NRARY+PQ P VIATK+ + +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN G LLS++ D TI LWDIN TP+ +++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++H+WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 20 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEN---RIIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 407
BLAST of retinoblastoma binding protein-1 vs. Ensembl Cavefish
Match: rbbp4 (RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:103039809]) HSP 1 Score: 437.958 bits (1125), Expect = 5.868e-152 Identity = 209/391 (53.45%), Postives = 280/391 (71.61%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KDYS R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPK---EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. Ensembl Cavefish
Match: rbb4l (histone-binding protein RBBP7 [Source:NCBI gene;Acc:103023991]) HSP 1 Score: 432.565 bits (1111), Expect = 8.961e-150 Identity = 207/392 (52.81%), Postives = 281/392 (71.68%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKD-EFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+PD+ R E KDY+ R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ +P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R +KP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYAVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGSPK---EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTAKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. Ensembl Cavefish
Match: pex7 (peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:103024267]) HSP 1 Score: 98.9821 bits (245), Expect = 8.685e-23 Identity = 83/346 (23.99%), Postives = 149/346 (43.06%), Query Frame = 3
Query: 252 GTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYG----LVTAHTDISIKIN---HDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWN-IKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL 1265
G + Y + S +PN C +++Y G G L TD+ + + +DG + + +V+ T +G++ ++D T +P P Q VLK H+QE + + W+ + +++S + D T ++WD PE S+ GHEG + W F S D L +WD + + + AH ++++ D+ + + IL TGS D ++ +WDLR + + + H +I ++++S +T+LAS D V WD + S L H V +N + P + S+D ++++ P F L
Sbjct: 3 GFRCSARHGYAVEVSPFLPNRLACATAQYYG-----IAGCGTLFVLEQRETDVQLLRSFDWNDGLFD-VTWSESNEHVLVTGGGDGSLQIWD-TANPKGPIQ--------VLKEHTQEVYSVDWSQTRGENLVVSGSWDHTAKVWD----PER------FQSVCTLQGHEGVLYSTIWSPHISSCFASASGDGTLRVWDVKSGSCRMAIPAHKTEILSCDWCKYDQNILVTGSVDCSLCVWDLRTVRQPVAQMLSHTYAIRRVKFSPFYKTVLASCSYDFTVRFWDYSR---------SPMLLDAMEHHSEFVCGLDFNLHIPNQVVDCSWDETIKIYTPPCFAAL 314
BLAST of retinoblastoma binding protein-1 vs. Ensembl Cavefish
Match: grwd1 (glutamate rich WD repeat containing 1 [Source:NCBI gene;Acc:103032799]) HSP 1 Score: 89.7373 bits (221), Expect = 3.914e-19 Identity = 74/299 (24.75%), Postives = 130/299 (43.48%), Query Frame = 3
Query: 408 INHDGCINRARYLPQCPNVIATK-SSNGNVYLFDYTRH----------PSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVM--AHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNM--GGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE------ELAFIHAGHCSRVIDFAWNGNEP--LMMASVSYDNILQ 1235
+ H G INR R + +A S G V +FD + Q+ + P GH EGF + W+ K G L+S I +W+ E +++ + H SVED+ W +F S VD+++ +WD R ++ + AHS DV + +N +E L +G +D + +WDLR G ++ + H + ++W+ ++ A+ G+D+ V WDL ++ +L F+H G + V + W+ P L+ ++S N+ +
Sbjct: 160 VPHYGGINRVRVTRRGEQSLAAVWSEKGQVEIFDLRPQLEAVYNSSVMAAFIKQNKEITPLFSFSGHMAEGFAVDWSPKVPGRLVSGDCKKNIHVWEPR---EGGVSWQI--DQRPFSSHTKSVEDLQWSPTEATVFASCSVDQSIRVWDIRAPPNSMLSVNEAHSSDVNVISWN-RTEPFLLSGGDDGLLKVWDLRQFKSGRAVASFKQHSAPVTSVEWNPVDSSVFAAAGADDVVSQWDLSVESCDMGERANDVKDLPPQLLFLHQGQ-TEVKELHWHPQLPGTLISTALSGFNVFR 451 HSP 2 Score: 55.8398 bits (133), Expect = 4.111e-8 Identity = 39/152 (25.66%), Postives = 65/152 (42.76%), Query Frame = 3
Query: 813 LIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGS----LKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEF 1256
I +E P H + +D++P L +G K I +W+ R G S + H S+ LQWS + T+ AS D + +WD++ S + ++ H S V +WN EP ++ S D +L++W +F
Sbjct: 210 FIKQNKEITPLFSFSGHMAEGFAVDWSPKVPGRLVSGDCKKNIHVWEPREGGVSWQIDQRPFSSHTKSVEDLQWSPTEATVFASCSVDQSIRVWDIRAPPNS--------MLSVNEAHSSDVNVISWNRTEPFLL-SGGDDGLLKVWDLRQF 352
BLAST of retinoblastoma binding protein-1 vs. Ensembl Cavefish
Match: taf5 (TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:103038729]) HSP 1 Score: 89.7373 bits (221), Expect = 7.856e-19 Identity = 76/237 (32.07%), Postives = 115/237 (48.52%), Query Frame = 3
Query: 537 SGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRV--IDFAWNGNEPLMMASVSYDNILQLW 1241
+ +CK +L GHS +G+S++ + LLSS+ DGTI+LW + + L Y GH V D + + F S G D+ +W +P H D+ F+P S Y+ ATGS D+TI LWD+ N G ++ L GH+G I L +S + + LASG +D +V LWD+ E GH + + F+ +G ++AS S DN ++LW
Sbjct: 461 ASECK---ILYGHSGPVYGVSFS-PDRNYLLSSSEDGTIRLWSL----------QTFTCLVAYKGHNYPVWDTQFSPYG-YYFVSGGHDRVARLWATDHYQPLRMFAGHLADITCTRFHPNSNYV-ATGSADRTIRLWDVLN-GHCVRVLTGHKGPIHSLAFSPNGK-YLASGSTDGRVLLWDIGHGLMIGE----------LKGHTDTIYALRFSRDGE---ILASGSMDNTVRLW 666
BLAST of retinoblastoma binding protein-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008002.1 (pep scaffold:Pmarinus_7.0:GL477852:421:9512:1 gene:ENSPMAG00000007189.1 transcript:ENSPMAT00000008002.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 431.409 bits (1108), Expect = 5.003e-150 Identity = 207/391 (52.94%), Postives = 274/391 (70.08%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KDYS R+I+GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V ++ IKINH+G +NRARY+PQ P +IATK+ V +FDYT+HPS PD SG+C PDL L+GH +EG+GLSWN +G LLS++ D T+ LWDI+ TP + KV+ + + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS D+T+ LWDLRN+ L H I Q+QWS H ETILAS G+D ++++WDL K G + E EL F+H GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLILGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVGTKIEVEIKINHEGEVNRARYMPQNPYIIATKTPTSEVLVFDYTKHPSVPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTVCLWDISGTPR---EGKVVEAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADQTVALWDLRNLKLKLHSFESHRDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQAAEDVEDGPPELLFVHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. Ensembl Sea Lamprey
Match: pex7 (peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]) HSP 1 Score: 95.5153 bits (236), Expect = 2.796e-22 Identity = 61/213 (28.64%), Postives = 109/213 (51.17%), Query Frame = 3
Query: 459 NVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWN-IKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPA-VKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLK 1091
+V+ T S +G++ L+D S+P+ P V +GH++E + + W+ + +++S + D T ++WD L+SL++Y GHEG V W F S D+ L +WD + A + + AH ++V++ D+ + + +L + + D I WDLRN+ + L GH +I +++ S + T+LAS D V WD +
Sbjct: 81 HVLVTGSGDGSLQLWD----ASQPE-----GPLRVYQGHTKEVYSVDWSQTRGENLVVSGSWDHTARVWDP----------AFLSSLAEYRGHEGVVYSTVWSPHIPSCFASASGDQTLRVWDVKSPHAARIVIPAHQEEVLSCDWCKYDQNLLVSAAVDCGIRGWDLRNIRQPVFSLLGHSYAIRRVRCSPFQPTVLASCSYDFSVRFWDFQ 274 HSP 2 Score: 59.3066 bits (142), Expect = 4.540e-10 Identity = 40/158 (25.32%), Postives = 70/158 (44.30%), Query Frame = 3
Query: 771 SDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHK-ETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLW 1241
+ Q FG G L++ E ++ +D + + ++ +E++L TGS D ++ LWD G L+ +GH + + WS + E ++ SG D+ +WD + E + GH V W+ + P AS S D L++W
Sbjct: 36 ASQYFGIAGSGSLLILHQTPEGITELRRFEWNDSLFDVAWSEDNEHVLVTGSGDGSLQLWDASQPEGPLRVYQGHTKEVYSVDWSQTRGENLVVSGSWDHTARVWDPAFLSSLAE----------YRGHEGVVYSTVWSPHIPSCFASASGDQTLRVW 183 HSP 3 Score: 58.9214 bits (141), Expect = 5.490e-10 Identity = 41/169 (24.26%), Postives = 79/169 (46.75%), Query Frame = 3
Query: 741 SVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKV-MAHSDDVVTLDFNPF-SEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLW 1241
S+ DV W + ++ + + D +L +WD + + ++V H+ +V ++D++ E ++ +GS D T +WD + SL RGHEG + WS H + AS D + +WD+K ++ + H V+ W + ++ S + D ++ W
Sbjct: 69 SLFDVAWSEDNEHVLVTGSGDGSLQLWDASQPEGPLRVYQGHTKEVYSVDWSQTRGENLVVSGSWDHTARVWDPAFL-SSLAEYRGHEGVVYSTVWSPHIPSCFASASGDQTLRVWDVKSPHAAR---------IVIPAHQEEVLSCDWCKYDQNLLVSAAVDCGIRGW 227
BLAST of retinoblastoma binding protein-1 vs. Ensembl Sea Lamprey
Match: pwp1 (PWP1 homolog, endonuclein [Source:ZFIN;Acc:ZDB-GENE-040426-1049]) HSP 1 Score: 72.7886 bits (177), Expect = 1.262e-14 Identity = 56/211 (26.54%), Postives = 97/211 (45.97%), Query Frame = 3
Query: 567 KGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCS--RVIDFAWNGNE 1193
+GH+ LSWN VL S++ D T+ LWD+ KV +L Q+ +VE WH F Q S DK+++++D R + ++ S +V + +N FS + ++D + D R+ S+ L+ HE ++ L S + L + +D V +WD+ S ++ ++ I+ G CS FA+ G +
Sbjct: 59 EGHTDAVLDLSWNHNARNVLASASADHTVILWDL-------VQGKVATTLEQHTDKAQTVE---WHPFEAQTLISGSYDKSVVLYDCRSPSDSHRMWRFSGEVERVTWNHFSPFHFLASTDDGFVYCLDARS-DKSVFTLQAHEEAVTGLVLSSQVKGCLVTSSADKHVKVWDILANKPSLVHSRDMKMGIIYCGSCSPDSPFTFAFGGQK 258 HSP 2 Score: 52.7582 bits (125), Expect = 5.304e-8 Identity = 54/229 (23.58%), Postives = 93/229 (40.61%), Query Frame = 3
Query: 459 NVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHE-GSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFI 1142
NV+A+ S++ V L+D + GK L+ H+ + + W+ A L+S + D ++ L+D ++ ++ G VE V W+ FS F + D + D R K + AH + V L + + L T S DK + +WD+ SL + R + G I S A GG + + +WD+ + + S E +
Sbjct: 76 NVLASASADHTVILWDLVQ--------GKVA--TTLEQHTDKAQTVEWHPFEAQTLISGSYDKSVVLYDCRSPSDSHRMWRF----------SGEVERVTWNHFSPFHFLASTDDGFVYCLDARSDKSVFTLQAHEEAVTGLVLSSQVKGCLVTSSADKHVKVWDILANKPSLVHSRDMKMGIIYCGSCSPDSPFTFAFGGQKDGLRVWDITNVKSVQTAFGSRERLLV 284
BLAST of retinoblastoma binding protein-1 vs. Ensembl Sea Lamprey
Match: taf5l (TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987]) HSP 1 Score: 71.2478 bits (173), Expect = 1.223e-13 Identity = 62/227 (27.31%), Postives = 102/227 (44.93%), Query Frame = 3
Query: 564 LKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKE-NTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLW 1241
L+ HS + + + AG LLS + D +++ WD + + + Y GH V DV F S D+ +W + P H DV + F+P Y+ ATGS D+T+ LW + G + + GH G++ L +S +LASGG D +V LWD+ KE +S+++ + F+ +G+ +AS S D +++W
Sbjct: 339 LRAHSGPVYAVRFLPGGAG-LLSCSEDASVRFWDP----------RTFTNTAVYQGHAYPVWDVDVSALG-LYFCSGSHDRTARLWVPERAFPLRVYAGHVSDVNVVRFHPNGSYV-ATGSADRTVRLWSAQQ-GSAARLFTGHRGAVLALAFSPGGR-LLASGGEDQRVRLWDIGSGAIVKELRGHSDDIT---------CLSFSPDGSA---LASGSSDGSVRVW 538 HSP 2 Score: 68.1662 bits (165), Expect = 1.426e-12 Identity = 64/241 (26.56%), Postives = 105/241 (43.57%), Query Frame = 3
Query: 390 TDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLL---SSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGT 1103
+D+ H G + R+LP +++ S + +V +D P + V +GH+ W++ + + L S + D T +LW PE +V Y GH V V +H + + D+ + +W ++ A H V+ L F+P +LA+G ED+ + LWD+ G +K LRGH I L +S + LASG SD V +WD++ T
Sbjct: 334 SDVKTLRAHSGPVYAVRFLPGGAGLLSC-SEDASVRFWD----PRTFTNTA------VYQGHAYP----VWDVDVSALGLYFCSGSHDRTARLW----VPERAFPLRV------YAGHVSDVNVVRFHP-NGSYVATGSADRTVRLWSAQQGSAARLFTGHRGAVLALAFSPGGR-LLASGGEDQRVRLWDI-GSGAIVKELRGHSDDITCLSFS-PDGSALASGSSDGSVRVWDVRGAST 545
BLAST of retinoblastoma binding protein-1 vs. Ensembl Sea Lamprey
Match: snrnp40 (small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978]) HSP 1 Score: 69.707 bits (169), Expect = 2.170e-13 Identity = 52/221 (23.53%), Postives = 103/221 (46.61%), Query Frame = 3
Query: 564 LKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSL------HKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMA 1208
LKGH+ + ++ +++ DGT++LWD K + Q L V ++ SDQ+ S G+D + +WD R++K + H+D V L +P Y+L+ + D ++ +WD+R + ++ +G++ + +L H + +++G +D V++WD T S + + GH V D A++ EP++++
Sbjct: 138 LKGHTSFVNACFPARRGPQMVCTASDDGTVKLWDT----RKKGSVHSFQNTYQCL-------SVTFNDTSDQIL-SGGIDNVIKVWDLRQNKLIYTMKGHNDSVTGLSLSPDGSYLLSN-AMDNSVRIWDIRPFAPMERCVKIFQGNVHNFEKNLLKCSWSHDGSKVSAGSADRFVYIWD----------TTSRRILYKLPGHAGSVNDVAFHPEEPIVLS 335 HSP 2 Score: 54.6842 bits (130), Expect = 1.436e-8 Identity = 40/143 (27.97%), Postives = 67/143 (46.85%), Query Frame = 3
Query: 702 VLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWD-RRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGT--SKENTY 1121
+L + GHEG V +H + L S G D+ +L+W+ + + H+ ++ + ++ I T S DKT+GLWD G +K L+GH + + ++ + D V LWD +K G+ S +NTY
Sbjct: 46 LLAPIMLLTGHEGEVYCCKFHPNGNTL-ASAGFDRTILMWNVYGDCDNYAHLKGHTGAILDIHYSTDGSTIF-TSSTDKTVGLWD-SETGERIKRLKGHTSFVNACFPARRGPQMVCTASDDGTVKLWDTRKKGSVHSFQNTY 185 HSP 3 Score: 46.595 bits (109), Expect = 7.090e-6 Identity = 36/134 (26.87%), Postives = 62/134 (46.27%), Query Frame = 3
Query: 840 PAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLW 1241
P + + H +V F+P LA+ D+TI +W++ + +L+GH G+I + +S TI S +D V LWD +TG + +F++A +R P M+ + S D ++LW
Sbjct: 49 PIMLLTGHEGEVYCCKFHPNGN-TLASAGFDRTILMWNVYGDCDNYAHLKGHTGAILDIHYSTDGSTIFTS-STDKTVGLWD-SETG-ERIKRLKGHTSFVNACFPAR--------RGPQMVCTASDDGTVKLW 170
BLAST of retinoblastoma binding protein-1 vs. Ensembl Yeast
Match: HAT2 (Subunit of the Hat1p-Hat2p histone acetyltransferase complex; required for high affinity binding of the complex to free histone H4, thereby enhancing Hat1p activity; similar to human RbAp46 and 48; has a role in telomeric silencing [Source:SGD;Acc:S000000782]) HSP 1 Score: 224.942 bits (572), Expect = 4.472e-70 Identity = 138/396 (34.85%), Postives = 205/396 (51.77%), Query Frame = 3
Query: 93 SFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAE-EEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL 1265
S ++Y WK N P +YD V LTWPSLTVQW+P + D + Q +I+GT EE++YL A + +P E E +A ++ ++ I+ K H+ I RARY+PQ PN++AT + G V+L Y+R S+ QS LK H G+ LS++ G LLS + D T+ LW++ + + N L H + D WH F+ LFG+V D L I D R + + + TL F+ S +LA D + L+DLRNM L ++ GHE ++ L++S H + ++ S GSDN++ +WDLK+ G + +E EL +HAGH S V DF N P ++AS +NILQ+W+ S L +
Sbjct: 9 SVDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGEEENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEITRARYMPQDPNIVATINGQGTVFL--YSR--SEGLQS-------TLKFHKDNGYALSFSTLVKGRLLSGSDDHTVALWEVGSGGDPTKPVRTWNDL-----HSDIINDNKWHNFNKDLFGTVSEDSLLKINDVRANNTTIDTVKCPQPFNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFDLNPQIPWLVASAEEENILQVWKCSHSLPI 388
BLAST of retinoblastoma binding protein-1 vs. Ensembl Yeast
Match: MSI1 (Subunit of chromatin assembly factor I (CAF-1); chromatin assembly by CAF-1 affects multiple processes including silencing at telomeres, mating type loci, and rDNA; maintenance of kinetochore structure; deactivation of DNA damage checkpoint after DNA repair; chromatin dynamics during transcription; and repression of divergent noncoding transcription; Msi1p localizes to nucleus and cytoplasm and independently regulates the RAS/cAMP pathway via sequestration of Npr1p kinase [Source:SGD;Acc:S000000399]) HSP 1 Score: 176.792 bits (447), Expect = 2.017e-51 Identity = 125/411 (30.41%), Postives = 196/411 (47.69%), Query Frame = 3
Query: 108 YIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVG---TQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEF---GGYGLVTAH--TDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLK------------------GHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGS-VEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKV--MAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGS-DNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPS 1250
Y WKKNT LYD + T++ WPSLT Q+ PD+ D+ RI++ + + E + + I+ ++ K ++D ++ EF + H DISI + C NRARYLPQ P++IA SS+G +Y+FD T+H S + K K E L+WN++ +LLSS +G +Q+WDI + ++ +++ + +G+ V DV W D LF + + + D R K ++ H V + FN + ILA+ + + LWD+RNM S H S+ L+WS + +T+LA+ G D V LWD T EE F H GH V D +W+ ++P +M SV+ DN + +W+P+
Sbjct: 23 YSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQKPEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGEC-NRARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIK---QYSHENPIIDLPLVSINSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSCRFNYKNSLILASADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWD----------TSCEETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPA 415
BLAST of retinoblastoma binding protein-1 vs. Ensembl Yeast
Match: RRB1 (Specific chaperone for ribosomal protein Rpl3p; binds to nascent Rpl3p during translation; essential gene [Source:SGD;Acc:S000004738]) HSP 1 Score: 104.76 bits (260), Expect = 7.145e-25 Identity = 106/409 (25.92%), Postives = 182/409 (44.50%), Query Frame = 3
Query: 132 PFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAE----EEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPN----VIATKSSNGNVYLFDYTRH------PSKPDQSGKCKPDLVLKGHSQ-EGFGLSWN-IKNAGVLLSSAVDGTIQLWDINCTP--ENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESK--PAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGS-------LKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDL----------KKTGTSKE-NTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQ 1244
P +Y+++ N+ WP LT+ +PD E ++Y Q I++ T + +E + +++A + +++ D E+D+ V + +I ++ NR + P + + AT S NG+VY+++ P +P +K H EG+GL W+ + G LLS G I + + +K F V N+ S+ED+ W + +F + G D + IWD R K PA+ V A + DV + ++ Y+LA+G ++ T G+WDLR S + H+G+I + ++ E+I+A G DN V LWDL ++ +KE +L F+H V D W+ P + S D L +W+
Sbjct: 115 PTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYP-QSILLTTATQSSRKKENELMVLALSNLAKTLLKDDNEGEDDEEDDEDDVDPVIENENIPLR----DTTNRLKVSPFAISNQEVLTATMSENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLIKTGALLSGDCSGQIYFTQRHTSRWVTDKQPFTVSNN--------KSIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQEIPPQLLFVHWQK--EVKDVKWHKQIPGCLVSTGTDG-LNVWK 507
BLAST of retinoblastoma binding protein-1 vs. Ensembl Yeast
Match: YPL247C_mRNA (Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; similar to the petunia WD repeat protein an11; overexpression causes a cell cycle delay or arrest [Source:SGD;Acc:S000006168]) HSP 1 Score: 74.7146 bits (182), Expect = 5.069e-15 Identity = 60/224 (26.79%), Postives = 100/224 (44.64%), Query Frame = 3
Query: 489 NVYLFDYTR-HPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE--------SKPAVKVMAH-----------SDDVVTLDFNPFSEYILATGSEDKT-IGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKT 1097
N+ L Y R HP+ P + D+ + G WN + +++SS++D T +WD+ + K +Q + H+ V DV + S QLF S G D ++ ++D R P+ V SD ++ L+ +P+ +LAT + D I + D+RN + L+GH S+ ++W K +L S G D +V WDL +
Sbjct: 217 NLSLCKYNRQHPANPAAAD----DMKVIGTFPPITSFDWNTVDTNLIISSSIDTTCIVWDLQSSHYVK---------TQLIAHDSEVFDVRFLTKSTQLFASCGGDGSVRVFDLRSLAHSTIIYEPPSSSVSGATAGTITPSSKGSDALLRLEPSPYDPNVLATFAADSNKIIILDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLSCGDDCQVLYWDLNSS 427
BLAST of retinoblastoma binding protein-1 vs. Ensembl Yeast
Match: SEC31 (Component of the Sec13p-Sec31p complex of the COPII vesicle coat; COPII coat is required for vesicle formation in ER to Golgi transport; mutant has increased aneuploidy tolerance [Source:SGD;Acc:S000002354]) HSP 1 Score: 71.633 bits (174), Expect = 7.744e-14 Identity = 64/236 (27.12%), Postives = 107/236 (45.34%), Query Frame = 3
Query: 564 LKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDD------VVTLDFNP--FSEYILATGSE-DKTIGLWDLRNMGGSLKYL-RGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELA-FIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQL 1238
HS + +N K VL S +G I +WD+N E+ +++ L + Q + V + W++ +F S G IWD + K + + S + + ++++P + ATGS+ D +I +WDLRN L+ L +GH+ I L W E +L S G DN V LW+ + +E+L+ F G+ FA P + A S+DN +++
Sbjct: 104 FSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPL-TPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES---------AEQLSQFPARGNWCFKTKFAPEA--PDLFACASFDNKIEV 327 HSP 2 Score: 61.6178 bits (148), Expect = 1.331e-10 Identity = 58/242 (23.97%), Postives = 107/242 (44.21%), Query Frame = 3
Query: 594 LSWNIKNAGVLLSSAVD-GTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAV---------KVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGS--LKYLRGHEGSIGQL---QWSLHKETILASG-GSDN--KVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL 1265
L W+ N +++ A+D G+++L+ N E N +NS++++ H SV+ V ++ D + S G + + IWD + + + M+ D+V++L +N ++ A+ +WDL+ L Y + G QL +W T +A+ GSDN + +WDL+ T L ++ GH ++ W + ++ S DN + LW P +L
Sbjct: 68 LDWSHNNK--IIAGALDNGSLELYSTN---EANN---AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT--------PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 293 HSP 3 Score: 54.6842 bits (130), Expect = 1.726e-8 Identity = 50/232 (21.55%), Postives = 98/232 (42.24%), Query Frame = 3
Query: 411 NHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWH-KFSDQLFGSVGV--DKNLLIWDRRESKPAVKVM--AHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLK 1091
NH + ++ + NV+A+ +NG ++++D + P P + E L+WN A V S+ +WD+ K + L+ S G + + V WH K S ++ + G D ++LIWD R + ++ + H +++LD+ E++L + D T+ LW+ + L + +++ + A DNK+ + L+
Sbjct: 106 NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS-VDEVISLAWNQSLAHVFASAGSSNFASIWDLKA----KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 331
BLAST of retinoblastoma binding protein-1 vs. Ensembl Nematostella
Match: EDO42058 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2K4]) HSP 1 Score: 429.869 bits (1104), Expect = 2.167e-149 Identity = 206/391 (52.69%), Postives = 276/391 (70.59%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRES---KPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+PD+T+ E KDYS R+I+GT +EQ++++IASV +PN+ F++ HYD +K EFGG+ V+ DI IKINH+G +NRAR++PQ P +IATK+ + +V +FDYT+HPSKPD +G+C PDL LKGH++EG+GLSWN G LLS++ D TI LWDI+ + K ++++ + GH VEDV WH + LFGSV D L+IWD R++ K A V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++H+WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 4 EEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTKPEGKDYSVHRLILGTHTSDEQNHVVIASVQLPNDEAQFDASHYDNDKGEFGGFASVSGKIDIEIKINHEGEVNRARFMPQNPCIIATKTPSADVLVFDYTKHPSKPDPNGECSPDLRLKGHTKEGYGLSWNPNVNGNLLSASDDHTICLWDISSGISKEQ--KTVDAMRIFTGHSAVVEDVSWHLLHESLFGSVADDHKLMIWDTRQTNSNKAAHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVWQMAE 392
BLAST of retinoblastoma binding protein-1 vs. Ensembl Nematostella
Match: EDO34980 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SMS9]) HSP 1 Score: 112.464 bits (280), Expect = 1.845e-27 Identity = 105/425 (24.71%), Postives = 188/425 (44.24%), Query Frame = 3
Query: 15 LFVCSK-FLCFTAVKYTMIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYS-TQRIIVGTQAEEEQ-DYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPN--VIATKSSNGNVYLFDY------TRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVM----AHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNM---GGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDL------KKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVS 1217
+FVCS+ FL A++ EEL+ DS ++ +Y T P L+ +PD +Y T I+ GTQ+E + +++++ ++ + + + + DE + ++ + H+G +NR R+ PN ++A+ S G+V+++D + +P Q + P GH+ EGF + W+ G LL+ + LW+ P+ + V + H SVEDV W + +F S VDK + IWD R + P+ M AH DV + +N +E + +G +D + +WDLR + G + + G I ++W ++ A+ +DN++ LWDL G + +L FIH G + + W+ P ++ S +
Sbjct: 13 VFVCSQVFLPGDAMEQD--EELTYDSTAY------------HMYHAAQTGA---PCLSFDVIPDNLGEARTEYPMTAYILAGTQSERSRANHIIVMKMS-----ELHRTHDEEKDSDEEEDDYIDEDPELETVMLKHNGGVNRIRH-GHIPNRHIVASWSERGSVHIWDVEAQIIASDNPGSSSQPRESSPLFTFSGHASEGFAMDWSRNTHGRLLTGDCKHNVHLWN----PQEGGSWHV--DQRPFNAHTDSVEDVQWSPNENNVFASCSVDKTIRIWDAR-AMPSKACMISTNAHDADVNVISWN-RNEPFIVSGGDDGILKVWDLRQLQKQGQPVALFKHSTGPITSVEWHPTDGSVFAASSADNQITLWDLAVERDEAAEGPGRHLDVPPQLLFIHMGQ-KDIKELHWHPQLPGVLISTA 405
BLAST of retinoblastoma binding protein-1 vs. Ensembl Nematostella
Match: EDO38818 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBS0]) HSP 1 Score: 95.9005 bits (237), Expect = 3.058e-22 Identity = 66/264 (25.00%), Postives = 125/264 (47.35%), Query Frame = 3
Query: 459 NVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRR-ESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQP 1247
+V+ + S +G++ L++ +P + V KGH+ E +G+ W + +LS++ D TI+LWD T + +++ + GH+ V W + F S D+++ IWD +P + AH +V+T D+ + ++++ +GS D I WD+RN + + H ++ +L+ S H+ I+AS D + WD T E H + +DF N ++P +A S+D ++ ++ P
Sbjct: 74 DVVISASGDGSLQLWNLALPEPQPVR--------VFKGHTAEVYGVDW-CREQDFVLSASWDHTIRLWDPLRTE--------IPTVAMFTGHQNVVYSSIWSPHIPRTFASASGDQHIGIWDMACPGRPQQLIRAHEGEVLTCDWAKYDQHLVVSGSVDTLIKGWDVRNTNAPVFSFKAHPYAVRRLKCSPHQGNIIASCSYDFTIKTWDTTSTLAPLETIE-------HHSEFATGLDF--NIHQPGQIADCSFDGMVTVYSP 311 HSP 2 Score: 46.9802 bits (110), Expect = 7.059e-6 Identity = 52/252 (20.63%), Postives = 94/252 (37.30%), Query Frame = 3
Query: 240 RIIVGTQAE-------EEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRES-KPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGG 971
R+ G AE EQD++L AS + +D + E + T H ++ + + + P P A+ S + ++ ++D P +P Q +++ H E W + +++S +VD I+ WD+ T FK H +V + + S D + WD + P + HS+ LDFN +A S D + ++ R++G
Sbjct: 99 RVFKGHTAEVYGVDWCREQDFVLSASWD-------HTIRLWDPLRTEIPTVAMFTGHQNV---------VYSSIWSPHIPRTFASASGDQHIGIWDMAC-PGRPQQ--------LIRAHEGEVLTCDWAKYDQHLVVSGSVDTLIKGWDVRNTNAPVFSFK---------AHPYAVRRLKCSPHQGNIIASCSYDFTIKTWDTTSTLAPLETIEHHSEFATGLDFNIHQPGQIADCSFDGMVTVYSPRSLGA 316
BLAST of retinoblastoma binding protein-1 vs. Ensembl Nematostella
Match: EDO29288 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T426]) HSP 1 Score: 85.1149 bits (209), Expect = 3.418e-19 Identity = 74/254 (29.13%), Postives = 114/254 (44.88%), Query Frame = 3
Query: 486 GNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQ--LFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLW 1241
G+ + FD T S+ L GHS F +S + N LLS + D TI+LW + +L Y GH V DV +F + F S D+ +W +P H DV + F+P YI ATGS D+T+ LWD++ G S++ GH+ ++ L +S + +++S G D ++ +WDL E T EL GH V ++ + ++AS DN ++LW
Sbjct: 2 GDAFCFDRTASESRR-----------LVGHSGPVFAVSIDHDNK-FLLSCSEDKTIRLWSL----------FTFTTLVAYRGHNYPVWDV---QFCPRGHYFASTSHDRTARLWSTDHQQPLRIFAGHVSDVNKVAFHPNCNYI-ATGSSDRTVRLWDIQT-GSSVRLFTGHKAAVQSLAFSRNGRHLISS-GVDTRLLVWDL------AEGTLVAEL----KGHTDTVYSLCFS-RDGTILASAGLDNCIKLW 216
BLAST of retinoblastoma binding protein-1 vs. Ensembl Nematostella
Match: EDO33060 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7ST98]) HSP 1 Score: 87.8113 bits (216), Expect = 1.171e-18 Identity = 70/231 (30.30%), Postives = 106/231 (45.89%), Query Frame = 3
Query: 564 LKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEF 1256
L GHS F +S + N LLS + D TI+LW + +L Y GH V DV + F S D+ +W +P H DV + F+P YI ATGS D+T+ LWD++ G S++ GH+ ++ L +S + +++S G D ++ +WDL E T EL GH V ++ + ++AS DN ++LW S F
Sbjct: 343 LVGHSGPVFAVSIDHDNK-FLLSCSEDKTIRLWSLF----------TFTTLVAYRGHNYPVWDVQFCP-RGHYFASTSHDRTARLWSTDHQQPLRIFAGHVSDVNVIAFHPNCNYI-ATGSSDRTVRLWDIQT-GSSVRLFTGHKAAVQSLAFSRNGRHLISS-GVDTRLLVWDL------AEGTLVAEL----KGHTDTVYSLCFS-RDGTILASAGLDNCIKLWNTSVF 547 HSP 2 Score: 53.5286 bits (127), Expect = 1.153e-7 Identity = 36/135 (26.67%), Postives = 65/135 (48.15%), Query Frame = 3
Query: 549 KPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWD 953
+P + GH + ++++ N + + + D T++LWDI +S+ + GH+ +V+ + + + L S GVD LL+WD E ++ H+D V +L F+ ILA+ D I LW+
Sbjct: 422 QPLRIFAGHVSDVNVIAFH-PNCNYIATGSSDRTVRLWDIQTG----------SSVRLFTGHKAAVQSLAFSRNGRHLISS-GVDTRLLVWDLAEGTLVAELKGHTDTVYSLCFSR-DGTILASAGLDNCIKLWN 543
BLAST of retinoblastoma binding protein-1 vs. Ensembl Medaka
Match: rbbp4 (RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:101155071]) HSP 1 Score: 438.728 bits (1127), Expect = 2.778e-152 Identity = 209/391 (53.45%), Postives = 280/391 (71.61%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLT QW+PD+TR E KDYS R+++GT +EQ++L+IASV +PN+ F++ HYD+EK EFGG+G V+ +I IKINH+G +NRARY+PQ P +IATK+ +V +FDYT+HPSKPD SG+C PDL L+GH +EG+GLSWN +G LLS++ D TI LWDI+ P+ + K++++ + + GH VEDV WH + LFGSV D+ L+IWD R SKP+ V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN NEP ++ SVS DNI+Q+WQ +E
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPK---EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
BLAST of retinoblastoma binding protein-1 vs. Ensembl Medaka
Match: rbb4l (histone-binding protein RBBP7 [Source:NCBI gene;Acc:101156710]) HSP 1 Score: 429.098 bits (1102), Expect = 5.430e-148 Identity = 209/392 (53.32%), Postives = 278/392 (70.92%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKD-EFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSE----ELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSE 1253
++Y WKKNTPFLYDLVMTH L WPSLTVQW+PD++R E KDY+ R+++GT +EQ++L+IASV VPN+ F++ HYD+EK EFGG+G V+ +I IKINHDG +NRARY+PQ P +IATK+ +V +FDYT+HP+KPD SG+C PDL LKGH +EG+GLSWN +G LLS++ D TI LWDI P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SK + V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E EL FIH GH +++ DF+WN EP ++ SVS DNI+Q+WQ +E
Sbjct: 55 EEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYAVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPAKPDPSGECSPDLRLKGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIGAGPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPGEPWIICSVSEDNIMQVWQMAE 443
BLAST of retinoblastoma binding protein-1 vs. Ensembl Medaka
Match: rbb4l (histone-binding protein RBBP7 [Source:NCBI gene;Acc:101156710]) HSP 1 Score: 414.846 bits (1065), Expect = 5.097e-142 Identity = 208/415 (50.12%), Postives = 277/415 (66.75%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKD-EFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEE---------LA---------------------FIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQ 1244
++Y WKKNTPFLYDLVMTH L WPSLTVQW+PD++R E KDY+ R+++GT +EQ++L+IASV VPN+ F++ HYD+EK EFGG+G V+ +I IKINHDG +NRARY+PQ P +IATK+ +V +FDYT+HP+KPD SG+C PDL LKGH +EG+GLSWN +G LLS++ D TI LWDI P+ + KV+++ + + GH VEDV WH + LFGSV D+ L+IWD R SK + V AH+ +V L FNP+SE+ILATGS DKT+ LWDLRN+ L H+ I Q+QWS H ETILAS G+D ++++WDL K G + +E+ LA FIH GH +++ DF+WN EP ++ SVS DNI+Q+WQ
Sbjct: 55 EEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYAVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPAKPDPSGECSPDLRLKGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIGAGPK---EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLVGPLASRLVGGLLKVLMWSFPVVLHQFIHGGHTAKISDFSWNPGEPWIICSVSEDNIMQVWQ 466
BLAST of retinoblastoma binding protein-1 vs. Ensembl Medaka
Match: grwd1 (glutamate rich WD repeat containing 1 [Source:NCBI gene;Acc:101163517]) HSP 1 Score: 100.138 bits (248), Expect = 1.316e-22 Identity = 79/290 (27.24%), Postives = 130/290 (44.83%), Query Frame = 3
Query: 414 HDGCINRARYLPQC--PNVIATKSSNGNVYLFDY-----TRHPSKP-----DQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVM--AHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNM--GGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDL----KKTGTSKENT--YSEELAFIHAGHCSRVIDFAWNGNEPLMMASVS 1217
H G +NR R + QC ++ A S G V +FD H S Q + KP GH EGF + W+ K G L+S I +W+ E + +++ + H SVED+ W +F S VD+++ +WD R ++ + AH+ D+ + +N SE L +G +D + +WDLR G ++ + H I ++WS ++ A+ G+D+ + WDL G E +L F+H G S + + W+ P +M S +
Sbjct: 154 HYGGVNRVR-VTQCGQQSLAAVWSEKGQVEIFDLRPQLEAVHSSAAMSAFLQQQKEAKPLFSFSGHMSEGFAIDWSPKAPGRLVSGDCKKNIHVWEPR---EGGSAWQI--DQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRVWDIRAPPNSMLSVDGAHASDINVISWN-RSEPFLLSGGDDGLLKVWDLRQFKTGRAVANFKQHSAPITSVEWSPADSSVFAASGADDVISQWDLSVESSDVGARVEGLKDLPPQLLFLHQGQ-SEIKEIHWHPQIPGVMISTA 435
BLAST of retinoblastoma binding protein-1 vs. Ensembl Medaka
Match: pex7 (peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:101156454]) HSP 1 Score: 97.4413 bits (241), Expect = 2.741e-22 Identity = 58/187 (31.02%), Postives = 96/187 (51.34%), Query Frame = 3
Query: 531 DQSGKCKPDLVLKGHSQEGFGLSWN-IKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDL 1088
D + + P V K H+QE + +SW+ + +++S + D T+++WD + + SL+ GHEG V W S D L IWD + + + V AH +++ D+ + + I+ATGS D +I +WDLRN+ + +L GH +I +L++S +T+LAS D V WD
Sbjct: 89 DTANQHAPLKVAKEHTQEVYSVSWSQTRGENLIVSGSWDHTVKVWDPSLS----------RSLTTLRGHEGVVYSTIWSPHIPGCIASASGDGTLRIWDVKAAVCRLAVPAHQAEILACDWCKYDQNIVATGSVDCSINVWDLRNIRQPVNHLLGHTYAIRRLKFSPFSQTVLASCSYDFTVRFWDF 265 HSP 2 Score: 52.373 bits (124), Expect = 3.410e-7 Identity = 39/158 (24.68%), Postives = 70/158 (44.30%), Query Frame = 3
Query: 771 SDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHK-ETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLW 1241
+ Q +G G L++ + +V+ D + + ++ +E++L G D ++ LWD N LK + H + + WS + E ++ SG D+ V +WD + S L + GH V W+ + P +AS S D L++W
Sbjct: 29 ASQYYGITGCGTLLVLDETPRGLVSVRSWEWGDGLFDVAWSEANEHLLVAGGGDGSLQLWDTANQHAPLKVAKEHTQEVYSVSWSQTRGENLIVSGSWDHTVKVWD---------PSLSRSLTTLR-GHEGVVYSTIWSPHIPGCIASASGDGTLRIW 176
BLAST of retinoblastoma binding protein-1 vs. Planmine SMEST
Match: SMESG000007931.1 (SMESG000007931.1) HSP 1 Score: 830.091 bits (2143), Expect = 0.000e+0 Identity = 398/401 (99.25%), Postives = 399/401 (99.50%), Query Frame = 3
Query: 63 MIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL 1265
MIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWD+NCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKE YSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL
Sbjct: 1 MIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDVNCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKEKNYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL 401
BLAST of retinoblastoma binding protein-1 vs. Planmine SMEST
Match: SMESG000007931.1 (SMESG000007931.1) HSP 1 Score: 778.474 bits (2009), Expect = 0.000e+0 Identity = 378/401 (94.26%), Postives = 379/401 (94.51%), Query Frame = 3
Query: 63 MIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRESKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL 1265
MIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWD+NCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDR FNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKE YSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL
Sbjct: 1 MIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDVNCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRH-------------------FNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKEKNYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFLKL 382
BLAST of retinoblastoma binding protein-1 vs. Planmine SMEST
Match: SMESG000062893.1 (SMESG000062893.1) HSP 1 Score: 379.793 bits (974), Expect = 2.724e-129 Identity = 177/393 (45.04%), Postives = 258/393 (65.65%), Query Frame = 3
Query: 102 KDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDKDYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE---SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGTSKENTY----SEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQPSEFL 1259
+DY WK++TPFLYD +M H L WPSLT QW+P I R DKDY+ R+I+GT +EQ++LLIAS+ +PN+ F++ YD E+ ++GG+G +I++ INH+G +NRARY+PQ +ATK+ +V +F+Y HP++P + KP+L LKGH +EG+GLSWN AG +LS++ D TI +WD N + ++ +N L Q++GH VEDV WH +FGSV DK L+IWD R SKP ++V AH+ +V + FNPF+++++ TGS DKT+ +WD+RN+ L H+ I Q+QWS H ETI AS G+D ++H+WD K G ++ EL FIH GH +++ DF+WN EP + SV+ DNILQ+WQ ++ +
Sbjct: 23 EDYKIWKRDTPFLYDCLMVHPLEWPSLTAQWLPTIDRPNDKDYTVHRLILGTHTSDEQNHLLIASINMPNDQTEFDASAYDTERFDYGGFGFPNGKLEITMMINHEGEVNRARYMPQNETFVATKTPTADVLIFNYAIHPARP-FGMEVKPELRLKGHLKEGYGLSWNPIKAGYILSASDDKTICMWDTNTAGNSSSEGPYINPLMQFIGHNTVVEDVAWHLRHGDVFGSVADDKKLMIWDIRSDNTSKPVIEVDAHTAEVNCIAFNPFNQHLVVTGSADKTVAMWDMRNLQLKLHSFEAHQDEIFQVQWSPHNETIFASSGTDRRLHIWDCSKIGLEQQEVEFVDGPPELLFIHPGHTAKISDFSWNQFEPWTICSVAEDNILQVWQMADIM 414
BLAST of retinoblastoma binding protein-1 vs. Planmine SMEST
Match: SMESG000055161.1 (SMESG000055161.1) HSP 1 Score: 253.832 bits (647), Expect = 2.208e-82 Identity = 122/142 (85.92%), Postives = 133/142 (93.66%), Query Frame = 3
Query: 234 TQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAEKDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQL 659
T+RIIVGTQ EE QDYLLIASVTVPNEYKCFES+HYDAEKDEFGGYGLVTA+TDI+IKINH G INR+RYL QCPNVIATKS NGNVYLF YTR+PSKPDQ+GKCKP LVL+G+SQEGFG SWNIKNAGVLLSSAV+G+IQL
Sbjct: 116 TRRIIVGTQTEE-QDYLLIASVTVPNEYKCFESRHYDAEKDEFGGYGLVTANTDINIKINHGGYINRSRYLTQCPNVIATKSPNGNVYLFHYTRNPSKPDQNGKCKPYLVLQGYSQEGFGFSWNIKNAGVLLSSAVNGSIQL 256
BLAST of retinoblastoma binding protein-1 vs. Planmine SMEST
Match: SMESG000037114.1 (SMESG000037114.1) HSP 1 Score: 229.95 bits (585), Expect = 2.020e-71 Identity = 138/390 (35.38%), Postives = 210/390 (53.85%), Query Frame = 3
Query: 117 WKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRLEDK--DYSTQRIIVGTQAEEEQDYLLIASVTVPNEYKCFESKHYDAE-KDEFGGYGLVTAHTDISIKINHDGCINRARYLPQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWDRRE------SKPAVKVMAHSDDVVTLDFNPFSEYILATGSEDKTIGLWDLRNMGGSLKYLRGHEGSIGQLQWSLHKETILASGGSDNKVHLWDLKKTGT-----SKENTYSEELAFIHAGHCSRVIDFAWNGNEPLMMASVSYDNILQLWQ 1244
WK N P +Y+L L WPS T QW+P E+K D++ +I++GT A+EE++ L+ A + N + + A+ K G + I+ +NH G +NRARY+PQ +++ATKSS + +++ G C L L GHS EG+G+SWN + G LL+ + D TI +DI+ + LN GH+ VEDVCWH +FGSVG D+ LLIWD R S P +V+AH+ D L ++P + +L TG D + LWD R + +L ++ E S+ ++ WS +ET+ S G +K+H+WD++K G +E+ + ELA IH+GH V D W+ +ASV+ DN++ +WQ
Sbjct: 12 WKINCPLMYNLAHFDTLDWPSFTCQWLP----FEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLV----ITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQTICAFDISQSAGGS----TLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSAL-HVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQ 376 HSP 2 Score: 61.6178 bits (148), Expect = 3.539e-10 Identity = 45/187 (24.06%), Postives = 78/187 (41.71%), Query Frame = 3
Query: 447 PQCPNVIATKSSNGNVYLFDYTRHPSKPDQSGKCKPDLVLKGHSQEGFGLSWNIKNAGVLLSSAVDGTIQLWDINCTPENKNDFKVLNSLSQYLGHEGSVEDVCWHKFSDQLFGSVGVDKNLLIWD------------RRESKPAVKVMAHS---DDVVTLDFNPFSEYILATGSEDKTIGLWDLRN 962
P N+ + + + ++DY R + S P + H+ + LSW+ + +LL+ DG + LWD + L S E SV V W + LF S G+ + IWD + PA M HS D V +D++P+ + +A+ +ED + +W +++
Sbjct: 207 PAEANIFGSVGDDQRLLIWDYRR----KEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQ----------RKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 379 The following BLAST results are available for this feature:
BLAST of retinoblastoma binding protein-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of retinoblastoma binding protein-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Cross References
External references for this transcript
Sequences
The following sequences are available for this feature:
transcript sequence >SMED30000072 ID=SMED30000072|Name=retinoblastoma binding protein-1|organism=Schmidtea mediterranea sexual|type=transcript|length=1273bpback to top protein sequence of SMED30000072-orf-1 >SMED30000072-orf-1 ID=SMED30000072-orf-1|Name=SMED30000072-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=402bp MIEELSNDSNSFCKDYIRWKKNTPFLYDLVMTHNLTWPSLTVQWMPDITRback to top Aliases
The feature 'retinoblastoma binding protein-1' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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